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Oryza sativa
cluster # 6947 cluster # 6947       Sequences # 4       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6947#0 length = 1547 sequences # 4  
consensusID : consensus_6947#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1547
fasta sequence 
                              [CGCGCCTCGACGCATTCACTCCGCCTCCGCCTCCGCCTCCGCCTCCGCCATCGATCGCCTCCTCTCCTCTCCCCTCGCCGCGCCGCGAAATCCGATTCGCCTGCTAGGCTAGGCTAGGCTAGGGCATGGCGGACGCGGCGTCGTCTTCGGCGTCGGCGTCGGCGGCGGTGGCGGGGACGCTGCCGGTGGCGGCGGCGGCGACGGGGAAGGACAAGGAGGACCGGCGCCGATTGGTGGGGAGGTGCGGCTTCGCGGTCGTCGGCATCATGAGCACCCTCCTCATCTACGGCCTTCTCCAGGAAAAAATCATGAGAGTTCCATATGGAGCAGAAAAGGAGTTCTTCAGATACTCGCTTTTTCTTGTTTTCTGTAACCGTATCACCACGTCTACGGTGTCTGCGCTGGTGCTAACGGCAAGTAAGAAATCCCTGGACCCTGTGGCTCCACTTCAGAAGTACTGTGTGGTCTCTGTATCAAACATACTGACTACAACTTGCCAATATGAGGCACTCAAGTATGTGAGCTTCCCTGTCCAAACACTTGCCAAATGTGCAAAGATGATACCTGTGATGATTTGGGGCACAATTATAATGAGGAAGAAGTACGGTGGAAAAGATTACTTCTTTGCAGTTGTCGTGACTGTTGGTTGCTCGTTGTTCATTCTATACCCAGCATCAATGGATGCCAGTCCATTCAACAGAGGCAGAGAAAACACTATTTGGGGCGTTTCACTCATGCTTGGTTATCTTGGATTTGATGGTTTCACAAGCACCTTCCAAGATAAACTCTTTAAAGGGTATGACATGGAAATACACAATCAAATATTCTACACGACAATGTGCTCCTGTGTTCTTAGTTTGAGCGGACTTATTCTCCAGAATCAGATGATTCCAGCTGTGGACTTTATGTTTCGTCATCCAGATTGCTTCTACGACGTCATAATCCTATCCAGTGTTGCAACAGCTAGTCAGTTCTTCATATCGTACACCATACGAACATTTGGGGCTCTCACATTTGCTACGATAATGACGACTAGACAGCTGGTGAGTATATTATTGTCCTGTGTGTGGTTTGTACATCCTCTTAGCTGGATGCAGTGGGTTGGCGCCGCCATTGTATTCGGAGCCCTGTACACAAAAAGCTTCTTGAGAAGTAAACCGCAGAAGCCAGCCGCTGC-AAACCCGTCGAATTCTGCTAACAACAGCTGACCAAACGACATAAGAAGAGATCCACCCCATTTG-TTGCCTTGCT-GCACC-GGACCAAACACCAAAGTCTT-GGTGTGAGATA-TGAATGAAGACATCCTGATGAGTTAAC-TGGAC-GACAGGTTGTA-GGGTTGTGTTAACATGGAGCTCAGAA-GGCTCAAGGGTTATTAGGCTATTAGCTTAGGAGGATCCAGTGGCAAATAGTTGAGGAAGCCCAGCCTGCTGGTAGTGAAATGACTTGGCTGCCGTTTTTGAGGCTTTATCCAGGCCGTTCTCTGCACTGCAGGTGCTTGATATATAAAATGTAAAATTATCTTTGCAGTCATTAGATTACAAGTAAAAAAA]

[+] EMBL AK070819             [CGCGCCTCGACGCATTCACTCCGCCTCCGCCTCCGCCTCCGCCTCCGCCATCGATCGCCTCCTCTCCTCTCCCCTCGCCGCGCCGCGAAATCCGATTCGCCTGCTAGGCTAGGCTAGGCTAGGGCATGGCGGACGCGGCGTCGTCTTCGGCGTCGGCGTCGGCGGCGGTGGCGGGGACGCTGCCGGTGGCGGCGGCGGCGACGGGGAAGGACAAGGAGGACCGGCGCCGATTGGTGGGGAGGTGCGGCTTCGCGGTCGTCGGCATCATGAGCACCCTCCTCATCTACGGCCTTCTCCAGGAAAAAATCATGAGAGTTCCATATGGAGCAGAAAAGGAGTTCTTCAGATACTCGCTTTTTCTTGTTTTCTGTAACCGTATCACCACGTCTACGGTGTCTGCGCTGGTGCTAACGGCAAGTAAGAAATCCCTGGACCCTGTGGCTCCACTTCAGAAGTACTGTGTGGTCTCTGTATCAAACATACTGACTACAACTTGCCAATATGAGGCACTCAAGTATGTGAGCTTCCCTGTCCAAACACTTGCCAAATGTGCAAAGATGATACCTGTGATGATTTGGGGCACAATTATAATGAGGAAGAAGTACGGTGGAAAAGATTACTTCTTTGCAGTTGTCGTGACTGTTGGTTGCTCGTTGTTCATTCTATACCCAGCATCAATGGATGCCAGTCCATTCAACAGAGGCAGAGAAAACACTATTTGGGGCGTTTCACTCATGCTTGGTTATCTTGGATTTGATGGTTTCACAAGCACCTTCCAAGATAAACTCTTTAAAGGGTATGACATGGAAATACACAATCAAATATTCTACACGACAATGTGCTCCTGTGTTCTTAGTTTGAGCGGACTTATTCTCCAGAATCAGATGATTCCAGCTGTGGACTTTATGTTTCGTCATCCAGATTGCTTCTACGACGTCATAATCCTATCCAGTGTTGCAACAGCTAGTCAGTTCTTCATATCGTACACCATACGAACATTTGGGGCTCTCACATTTGCTACGATAATGACGACTAGACAGCTGGTGAGTATATTATTGTCCTGTGTGTGGTTTGTACATCCTCTTAGCTGGATGCAGTGGGTTGGCGCCGCCATTGTATTCGGAGCCCTGTACACAAAAAGCTTCTTGAGAAGTAAACCGCAGAAGCCAGCCGCTGC AAACCCGTCGAATTCTGCTAACAACAGCTGACCAAACGACATAAGAAGAGATCCACCCCATTTG TTGCCTTGCT GCACC GGACCAAACACCAAAGTCTT GGTGTGAGATA TGAATGAAGACATCCTGATGAGTTAAC TGGAC GACAGGTTGTA GGGTTGTGTTAACATGGAGCTCAGAA GGCTCAAGGGTTATTAGGCTATTAGCTTAGGAGGATCCAGTGGCAAATAGTTGAGGAAGCCCAGCCTGCTGGTAGTGAAATGACTTGGCTGCCGTTTTTGAGGCTTTATCCAGGCCGTTCTCTGCACTGCAGGTGCTTGATATATAAAATGTAAAATTATCTTTGCAGTCATTAGAT              ]
[+] EMBL OSC4911              [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          TTGCAACAGCTAGTCAGTTCTTCATATCGTACACCATACGAACATTTGGGGCTCTCACATTTGCTACGATAATGACGACTAGACAGCTGGTGAGTATATTATTGTCCTGTGTGTGGTTTGTACATCCTCTTAGCTGGATGCAGTGGGTTGGCGCCGCCATTGTATTCGGAGCCCTGTACACAAAAAGCTTCTTGAGAAGTAAACCGCAGAAGCCAGCCGCTGCAAAACCCGTCGAATTCTGCTAACAACAGCTGACCAAACGACATAAGAAGAGATCCACCCCATTTGTTTGCCTTTCTGGCACCGGGACCAAACANCAAAGTCTTGGGTGTGAGATATTGAATTAAGGCATCCTGATGAGTTAACTTGGACGGACAGGTTGTAGGGGTTGTGTTNACATGGAGCTCAGAAGGGTTCAA                                                                                                                                                                                        ]
[+] EMBL BI806868             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         tGGGCTCTCACATTTGCTACGATAATGACGACTAGACAGCTGGTGAGTATATTATTGTCCTGTGTGTGGTTTGTACATCCTCTTAGCTGGATGCAGTGGGTTGGCGCCGCCATTGTATTCGGAGCCCTGTACAC AAAAGCTTCTTGAGAAGTAAACCGCAGAAGCCAGCCGCTGC AAACCCGTCGAATTCTGCTAACAACAGCTGACCAAACGACATAAGAAGAGATCCACCCCATTTG TTGCCTTGCT GCACC GGACC AACACCAAAGTCTT GGTGTGAGATA TGAATGAAGACATCCTGATGAGTTAAC TGGAC GACAGGTTGTA GGGTTGTGTTAACATGGAGCTCAGAA GGCTCAAGGGTTATTAGGCTATTAGCTTAGGAGGATCCAGTGGC AATAGTTGAGGAAGCCCAGCCTGCTGGTAGTGAAATGACTTGGCTGCCGTTTTTGAGGCTTTATCCAGGCCGTTCTCTGCACTGCAGGTGCTTGATATATAAAATGTAAAATTATCTTTGCAGTCAaaa                 ]
[+] EMBL AU102072             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  CGAATTCTGCTAACAACAGCTGACCAAACGACATAAGAAGAGATCCACCCCATTTG TTGCCTTGCT GCACC GGACCAAACACCAAAGTCTT GGTGTGAGATA TGAATGAAGACATCCTGATGAGTTAAC TGGAC GACAGGTTGTA GGGTTGTGTTAACATGGAGCTCAGAA GGCTCAAGGGTTATTAGGCTATTAGCTTAGGAGGATCCAGTGGCAAATAGTTGAGGAAGCCCAGCCTGCTGGTAGTGAAATGACTTGGCTGCCGTTTTTGAGGCTTTATCCAGGCCGTTCTCTGCACTGCAGGTGCTTGATATATAAAATGTAAAATTATCTTTGCAGTCATTAGATTACAAGTAAAAAAA]




>consensus_6947#0
CGCGCCTCGACGCATTCACTCCGCCTCCGCCTCCGCCTCCGCCTCCGCCATCGATCGCCT
CCTCTCCTCTCCCCTCGCCGCGCCGCGAAATCCGATTCGCCTGCTAGGCTAGGCTAGGCT
AGGGCATGGCGGACGCGGCGTCGTCTTCGGCGTCGGCGTCGGCGGCGGTGGCGGGGACGC
TGCCGGTGGCGGCGGCGGCGACGGGGAAGGACAAGGAGGACCGGCGCCGATTGGTGGGGA
GGTGCGGCTTCGCGGTCGTCGGCATCATGAGCACCCTCCTCATCTACGGCCTTCTCCAGG
AAAAAATCATGAGAGTTCCATATGGAGCAGAAAAGGAGTTCTTCAGATACTCGCTTTTTC
TTGTTTTCTGTAACCGTATCACCACGTCTACGGTGTCTGCGCTGGTGCTAACGGCAAGTA
AGAAATCCCTGGACCCTGTGGCTCCACTTCAGAAGTACTGTGTGGTCTCTGTATCAAACA
TACTGACTACAACTTGCCAATATGAGGCACTCAAGTATGTGAGCTTCCCTGTCCAAACAC
TTGCCAAATGTGCAAAGATGATACCTGTGATGATTTGGGGCACAATTATAATGAGGAAGA
AGTACGGTGGAAAAGATTACTTCTTTGCAGTTGTCGTGACTGTTGGTTGCTCGTTGTTCA
TTCTATACCCAGCATCAATGGATGCCAGTCCATTCAACAGAGGCAGAGAAAACACTATTT
GGGGCGTTTCACTCATGCTTGGTTATCTTGGATTTGATGGTTTCACAAGCACCTTCCAAG
ATAAACTCTTTAAAGGGTATGACATGGAAATACACAATCAAATATTCTACACGACAATGT
GCTCCTGTGTTCTTAGTTTGAGCGGACTTATTCTCCAGAATCAGATGATTCCAGCTGTGG
ACTTTATGTTTCGTCATCCAGATTGCTTCTACGACGTCATAATCCTATCCAGTGTTGCAA
CAGCTAGTCAGTTCTTCATATCGTACACCATACGAACATTTGGGGCTCTCACATTTGCTA
CGATAATGACGACTAGACAGCTGGTGAGTATATTATTGTCCTGTGTGTGGTTTGTACATC
CTCTTAGCTGGATGCAGTGGGTTGGCGCCGCCATTGTATTCGGAGCCCTGTACACAAAAA
GCTTCTTGAGAAGTAAACCGCAGAAGCCAGCCGCTGCAAACCCGTCGAATTCTGCTAACA
ACAGCTGACCAAACGACATAAGAAGAGATCCACCCCATTTGTTGCCTTGCTGCACCGGAC
CAAACACCAAAGTCTTGGTGTGAGATATGAATGAAGACATCCTGATGAGTTAACTGGACG
ACAGGTTGTAGGGTTGTGTTAACATGGAGCTCAGAAGGCTCAAGGGTTATTAGGCTATTA
GCTTAGGAGGATCCAGTGGCAAATAGTTGAGGAAGCCCAGCCTGCTGGTAGTGAAATGAC
TTGGCTGCCGTTTTTGAGGCTTTATCCAGGCCGTTCTCTGCACTGCAGGTGCTTGATATA
TAAAATGTAAAATTATCTTTGCAGTCATTAGATTACAAGTAAAAAAA

clustalw multiple alignements is not computed in this case
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)