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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8254#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 2214 fasta sequence
[CGCCGCCGTGTACTCGCCTTCCGGCCGCGGCCGGCGTCGCATATCATTTCGCCTCCCTCTGTATCATCACTCCGCTCCACCCCCCACGTAGAACATCTGGCGCCAACTCCTTCTCGTCATGCCCATGCGGTGAAATCAGTTTCGTGGGAAAAAAAACCAAGGCCACTCCTAGCTTTGGCATCGATCGGCCCGGTTGTTTGGGGATCTTGCGCTCAGTAGCGAAGCCACCAGTATGGCGAGGTATGGCGGCCGCCATACCTGCCCACCGGCTGATCGCCTCATCGCATCGGCTGTTCGCCTCCTCTCGTCGACAGTTGACTCGTCTCCTGCCGCGTGCCGCCCGATCTCCGACTCCAGGTCCAGGACACCGCCGGACGCCGTTGCCACGCTGGACGCCGCCACAGTAATCACTCCGAGACACCATTACCCAGATTGCGCCATGGAAGAGGAAGAACCATCTAATAATCGCCGACGCCGACTGCGCCCAATTTCAGAAGCTACCCAGATTGGGAAAAAAATAAAAGTTGACTGCAGATCAGTGTTTTTTTGGTCTAATGGCTAAGCGAATGAATCCATGTCATGGGAAACTGGTCCCCAAGAACAAAAGAGCCATATTACAGTTTGATGACATTCCTGAGGATGTGGTGTTCTTGATAATCCGGTTGCTTTCGCTGACTAATGCTGCGCGTGTCAGCATGGTGTCGCAAAAGTGGCTACAATCTTGGAGGCTCTATCCTAATTTAGAGTTCACCTCGAAGGCGTTGGGTTTGAATAAACGGGTGCACAAACAAGGGAGGAGGGCTAAATTTGTCAGGTGTGTTAACACCATCATAAGGCACCACGCTGGAACAGGGATTAACTCATTCACCTTGAAGCGCAACCTCAACAATCACAAGTACGCACACTATATTGACCGTTGGATTTACTTTGCAGTCCGATCTGGTGCAAATGAACTGACTATTGACCTAAGTCCACGATGGTATGCTCATCCTCGTGATGTCAAATACAGCTTTCCATCCTCTAATGTTGCTGCTCCAGAACCAACCTCTATAGAGCATCTTAAGCTTTGCTTTATGAATTTGAGGCCTTTACCAACTTTTAGTGGCCTAAGAAGCTTGAAGACTCTTGATTTGGCCCTTGTATGTATAACCACAGAAGATTTAGAGAGCTTGTTGAGTTATACCCCTGCTCTACAACAGTTGAAGCTAAGGCAATGTCCAATGCTGGAATACTTGAAGATCACTGATGTACTAGCTAAGCTTGTCTACATTGATATCGTTCCCTGCTTGTGGCTGAAGATTTTGGAGATCCATGCTCAAAATCTTGTTGCGATTAATACTTACAATATCTGTCACCTAAAAATAGTACTGAGTGAAGCATTAGTGTTGAAGGGGGCACACATTGAGTTAGTTCTGTCATCAGATGTTATTGAGTATGCTTTTACTGATCTTGCACCACTCATGCCAGACCTCGAGTCATTGTTCCTGAGTGGCTGTACTGAGATGATTATATCCAGGAGACCTCCAAGCAATAGATTCCATTGCCTGAAGCAATTGGAGTTAAAATTGCAGGATATATCGACGAAATATGATCTTCTATTTCTTGCTAAGTTTGTTGATGCTGCTCCAGTCCTAGAAGCTCTCGTTTTTCATCTGGAAGATATAGAGGAGCCATTTTGTTACATGGAAAAGGAAGCAGAGTTGAGAAGTCTGGAGAAACATTGTCCACATAAAAACCTCAAGTTGGTCAAAATGACTGGATTTTCAGCAGGCCGTTCAAGCCTTGAGCTTGCTCTGTATTTCGTGGAGAACTCACCAGCACTAGAACTCCTGATTCTTGATCATCGGCTTGACAGATCTGTTTGCCGAATCACTTTTGGTGGTGACTTGGATGCGAAATGCTCGAAAGGATATGAACACACTATCTCCAAATATGTTAGCAATGCGATTCCTCGCCGTGTTAGATTATCATATTCCTAATGTAGCACAAACAAGTTGCACGTGGTGCGAGTTGCAGTGCTAGGACTGCTACAGTAGAAATTAAAATTGCAACGACAGCTGTATAAATTGTAAGATGTTTTGGTCTCTCAATCTATGATGTGATCAGGTAATTAAATGACACATGAGTGCAGTAAAAGTGCAAGTATATAGTAGATCAATGGCAATGGGCAATGAGATGTACTACCTCCATTTTTTTTAATAGATGACGCCGTTG]
[+] EMBL AK069909 [CGCCGCCGTGTACTCGCCTTCCGGCCGCGGCCGGCGTCGCATATCATTTCGCCTCCCTCTGTATCATCACTCCGCTCCACCCCCCACGTAGAACATCTGGCGCCAACTCCTTCTCGTCATGCCCATGCGGTGAAATCAGTTTCGTGGGAAAAAAAACCAAGGCCACTCCTAGCTTTGGCATCGATCGGCCCGGTTGTTTGGGGATCTTGCGCTCAGTAGCGAAGCCACCAGTATGGCGAGGTATGGCGGCCGCCATACCTGCCCACCGGCTGATCGCCTCATCGCATCGGCTGTTCGCCTCCTCTCGTCGACAGTTGACTCGTCTCCTGCCGCGTGCCGCCCGATCTCCGACTCCAGGTCCAGGACACCGCCGGACGCCGTTGCCACGCTGGACGCCGCCACAGTAATCACTCCGAGACACCATTACCCAGATTGCGCCATGGAAGAGGAAGAACCATCTAATAATCGCCGACGCCGACTGCGCCCAATTTCAGAAGCTACCCAGATTGGGAAAAAAATAAAAGTTGACTGCAGATCAGTGTTTTTTTGGTCTAATGGCTAAGCGAATGAATCCATGTCATGGGAAACTGGTCCCCAAGAACAAAAGAGCCATATTACAGTTTGATGACATTCCTGAGGATGTGGTGTTCTTGATAATCCGGTTGCTTTCGCTGACTAATGCTGCGCGTGTCAGCATGGTGTCGCAAAAGTGGCTACAATCTTGGAGGCTCTATCCTAATTTAGAGTTCACCTCGAAGGCGTTGGGTTTGAATAAACGGGTGCACAAACAAGGGAGGAGGGCTAAATTTGTCAGGTGTGTTAACACCATCATAAGGCACCACGCTGGAACAGGGATTAACTCATTCACCTTGAAGCGCAACCTCAACAATCACAAGTACGCACACTATATTGACCGTTGGATTTACTTTGCAGTCCGATCTGGTGCAAATGAACTGACTATTGACCTAAGTCCACGATGGTATGCTCATCCTCGTGATGTCAAATACAGCTTTCCATCCTCTAATGTTGCTGCTCCAGAACCAACCTCTATAGAGCATCTTAAGCTTTGCTTTATGAATTTGAGGCCTTTACCAACTTTTAGTGGCCTAAGAAGCTTGAAGACTCTTGATTTGGCCCTTGTATGTATAACCACAGAAGATTTAGAGAGCTTGTTGAGTTATACCCCTGCTCTACAACAGTTGAAGCTAAGGCAATGTCCAATGCTGGAATACTTGAAGATCACTGATGTACTAGCTAAGCTTGTCTACATTGATATCGTTCCCTGCTTGTGGCTGAAGATTTTGGAGATCCATGCTCAAAATCTTGTTGCGATTAATACTTACAATATCTGTCACCTAAAAATAGTACTGAGTGAAGCATTAGTGTTGAAGGGGGCACACATTGAGTTAGTTCTGTCATCAGATGTTATTGAGTATGCTTTTACTGATCTTGCACCACTCATGCCAGACCTCGAGTCATTGTTCCTGAGTGGCTGTACTGAGATGATTATATCCAGGAGACCTCCAAGCAATAGATTCCATTGCCTGAAGCAATTGGAGTTAAAATTGCAGGATATATCGACGAAATATGATCTTCTATTTCTTGCTAAGTTTGTTGATGCTGCTCCAGTCCTAGAAGCTCTCGTTTTTCATCTGGAAGATATAGAGGAGCCATTTTGTTACATGGAAAAGGAAGCAGAGTTGAGAAGTCTGGAGAAACATTGTCCACATAAAAACCTCAAGTTGGTCAAAATGACTGGATTTTCAGCAGGCCGTTCAAGCCTTGAGCTTGCTCTGTATTTCGTGGAGAACTCACCAGCACTAGAACTCCTGATTCTTGATCATCGGCTTGACAGATCTGTTTGCCGAATCACTTTTGGTGGTGACTTGGATGCGAAATGCTCGAAAGGATATGAACACACTATCTCCAAATATGTTAGCAATGCGATTCCTCGCCGTGTTAGATTATCATATTCCTAATGTAGCACAAACAAGTTGCACGTGGTGCGAGTTGCAGTGCTAGGACTGCTACAGTAGAAATTAAAATTGCAACGACAGCTGTATAAATTGTAAGATGTTTTGGTCTCTCAATCTATGATGTGATCAGGTAATTAAATGACACATGAGTGCAGTAAAAGTGCAAGTATATAGTAGATCAATGGCAATGGGCAATGAGATGTACTACCTCCATTTTTTTTAATAGATGACGCCGTTG]
[-] EMBL CB675512 [ ATCCATGCTCAAAATCTTGTTGCGATTAATACTTACAATATCTGTCACCTAAAAATAGTACTGAGTGAAGCATTAGTGTTGAAGGGGGCACACATTGAGTTAGTTCTGTCATCAGATGTTATTGAGTATGCTTTTACTGATCTTGCACCACTCATGCCAGACCTCGAGTCATTGTTCCTGAGTGGCTGTACTGAGATGATTATATCCAGGAGACCTCCAAGCAATAGATTCCATTGCCTGAAGCAATTGGAGTTAAAATTGCAGGATATATCGACGAAATATGATCTTCTATTTCTTGCTAAGTTTGTTGATGCTGCTCCAGTCCTAGAAGCTCTCGTTTTTCATCTGGAAGATATAGAGGAGCCATTTTGTTACATGGAAAAGGAAGCAGAGTTGAGAAGTCTGGAGAAACATTGTCCACATAAAAACCTCAAGTTGGTCAAAATGACTGGATTTTCAGCAGGCCGTTCAAGCCTTGAGCTTGCTCTGTATTTCGTGGAGAACTCACCAGCACTAGAACTCCTGATTCTTGATCATCGGCTTGACAGATCTGTTTGCCGAATCACTTTTGGTGGTGACTTGGATGCGAAATGCTCGAAAGGATATGAACACACTATCTCCAAATATGTTAGCAATGCGATTCCTCGCCGTGTTAGATTATCATATTCCTAATGTAGCACAAACAAGTTGCACGTGGTGCGAGTTGCAGTGCTAGGACTGCTACAGTAGAAATTAAAATTGCAACGACAGCTGTATAAATTGTAAGATGTTTTGGTCTCTCAATCTATGATGTGATCAGGTAATTAAATG ]
consensusID : consensus_8254#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 809 fasta sequence
[TCCATTATTTTATTATATATGTATGTTTTCTTATACAAACTAGAGTACTAGACTAGTACTTAGTCCGTAGTAAGTTCGCCATAGGTGAATTTTTATCCTGGCTTCGCCACTGCTTGCGCTGCTTCTGTTTGTATCTAGAGGGGATCGATCGAATACTTGGGAGACTCAAATCCACAAATTTCGTCAGCATTGCGTGCTGCTGCTGCAATACTGTGATCAGTGTTTTTTTGGTCTAATGGCTAAGCGAATGAATCCATGTCATGGGAAACTGGTCCCCAAGAACAAAAGAGCCATATTACAGTTTGATGACATTCCTGAGGATGTGGTGTTCTTGATAATCCGGTTGCTTTCGCTGACTAATGCTGCGCGTGTCAGCATGGTGTCGCAAAAGTGGCTACAATCTTGGAGGCTCTATCCTAATTTAGAGTTCACCTCGAAGGCGTTGGGTTTGAATAAACGGGTGCACAAACAAGGGAGGAGGGCTAAATTTGTCAGGTGTGTTAACACCATCATAAGGCACCACGCTGGAACAGGGATTAACTCATTCACCTTGAAGCGCAACCTCAACAATCACAACTTTCCATCCTCTAATGTTGCTGCTCCAGAACCAACCTCTATAGAGCATCTTAAGCTTTGCTTTATGAATTTGAGGCCTTTACCAACTTTTAGTGGCCTAAGAAGCTTGAAGACTCTTGATTTGGCCCTTGTATGTATAACCACAGAAGATTTAGAGAGCTTGTTGAGTTATACCCCTGCTCTACAACAGTTGAAGCTAAGGCAATGTCCNATGCTGGAATACTTGAAGATCA]
[+] EMBL CB675511 [TCCATTATTTTATTATATATGTATGTTTTCTTATACAAACTAGAGTACTAGACTAGTACTTAGTCCGTAGTAAGTTCGCCATAGGTGAATTTTTATCCTGGCTTCGCCACTGCTTGCGCTGCTTCTGTTTGTATCTAGAGGGGATCGATCGAATACTTGGGAGACTCAAATCCACAAATTTCGTCAGCATTGCGTGCTGCTGCTGCAATACTGTGATCAGTGTTTTTTTGGTCTAATGGCTAAGCGAATGAATCCATGTCATGGGAAACTGGTCCCCAAGAACAAAAGAGCCATATTACAGTTTGATGACATTCCTGAGGATGTGGTGTTCTTGATAATCCGGTTGCTTTCGCTGACTAATGCTGCGCGTGTCAGCATGGTGTCGCAAAAGTGGCTACAATCTTGGAGGCTCTATCCTAATTTAGAGTTCACCTCGAAGGCGTTGGGTTTGAATAAACGGGTGCACAAACAAGGGAGGAGGGCTAAATTTGTCAGGTGTGTTAACACCATCATAAGGCACCACGCTGGAACAGGGATTAACTCATTCACCTTGAAGCGCAACCTCAACAATCACAACTTTCCATCCTCTAATGTTGCTGCTCCAGAACCAACCTCTATAGAGCATCTTAAGCTTTGCTTTATGAATTTGAGGCCTTTACCAACTTTTAGTGGCCTAAGAAGCTTGAAGACTCTTGATTTGGCCCTTGTATGTATAACCACAGAAGATTTAGAGAGCTTGTTGAGTTATACCCCTGCTCTACAACAGTTGAAGCTAAGGCAATGTCCNATGCTGGAATACTTGAAGATCA]
consensusID : consensus_8254#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 745 fasta sequence
[TAACCCAAATCTACAAACCCCTCCCCCCCTTCCTCTCTCTCGTCCGTTCCGGCGCCGCCGTGTACTTGCCTTCCGGCCGCGGCCGGCGTCGCATATCATTTCGCCTCCCTCTGTATCATCACTCCGCTCCACCCCCCACGTAGAACATCTGGCGCCAACTCCTTCTCGTCATGCCCATGCGGTGAAATCAGTTTCGTGAAGGGAAAAAAAAACCAAGGCCACTCCTAGCTTTGGCATCGATCGGTCCGGTTGTTTGGGGATCTTGCGCTCAGTAGCGAAGCCACCAGTATGGCGAGGTATGGCGGCCGCCATACCTGCCCACCGGCTGATCGCCTCCTCTCGTCGACAGTTGACTCGTCTCCTGCCGCGTGCCGCCCGATCTCCGACTCCAGGTCCAGGACACCGCCGGACGCCGTTGCCACGCTGGACGCCGCCACATTACCCAGATTGCGCCATGGAAGAGGAAGAACCATCTAATAATCGCCGACGCTGACTGCGCCCAATTTCAGAAGCTACCCAGATTGGGAAAAAAATAAAAGAGGGGATCGATCGAATACTTGGGAGACTCAAATCCACGAATTTCGTCAGCATTGCGTGCTGCTGCTGCAATACTGTGATCAGTGTTTTTTTGGTCTAATGGCTAAGCGAATGAATCCATGTCATGGGAAACTGGTCCCCAAGAACAAAAGAGCCATATTACAGTTTGATGACATTCCTGAGGATGTGGGTTCTTGATAATCCGGTT]
[+] EMBL CB627243 [TAACCCAAATCTACAAACCCCTCCCCCCCTTCCTCTCTCTCGTCCGTTCCGGCGCCGCCGTGTACTTGCCTTCCGGCCGCGGCCGGCGTCGCATATCATTTCGCCTCCCTCTGTATCATCACTCCGCTCCACCCCCCACGTAGAACATCTGGCGCCAACTCCTTCTCGTCATGCCCATGCGGTGAAATCAGTTTCGTGAAGGGAAAAAAAAACCAAGGCCACTCCTAGCTTTGGCATCGATCGGTCCGGTTGTTTGGGGATCTTGCGCTCAGTAGCGAAGCCACCAGTATGGCGAGGTATGGCGGCCGCCATACCTGCCCACCGGCTGATCGCCTCCTCTCGTCGACAGTTGACTCGTCTCCTGCCGCGTGCCGCCCGATCTCCGACTCCAGGTCCAGGACACCGCCGGACGCCGTTGCCACGCTGGACGCCGCCACATTACCCAGATTGCGCCATGGAAGAGGAAGAACCATCTAATAATCGCCGACGCTGACTGCGCCCAATTTCAGAAGCTACCCAGATTGGGAAAAAAATAAAAGAGGGGATCGATCGAATACTTGGGAGACTCAAATCCACGAATTTCGTCAGCATTGCGTGCTGCTGCTGCAATACTGTGATCAGTGTTTTTTTGGTCTAATGGCTAAGCGAATGAATCCATGTCATGGGAAACTGGTCCCCAAGAACAAAAGAGCCATATTACAGTTTGATGACATTCCTGAGGATGTGGGTTCTTGATAATCCGGTT]
consensusID : consensus_8254#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 662 fasta sequence
[ACTCGCTTTCCGGCCGCGGCCGGCGTCGCATATCATTTCGCCTCCCTCTGTATCATCACTCCGCTCCACCCCCCACGTAGAACATCTGGCGCCAACTCCTTCTCGTCATGCCCATGCGGTGAAATCAGTTTCGTGAAGGGAAAAAAAAACCAAGGCCACTCCTAGCTTTGGCATCGATCGGTCCGGTTGTTTGGGGATCTTGCGCTCAGTAGCGAAGCCACCAGTATGGCGAGGTATGGCGGCCGCCATACCTGCCCACCGGCTGATCGCCTCCTCTCGTCGACAGTTGACTCGTCTCCTGCCGCGTGCCGCCCGATCTCCGACTCCAGGTCCAGGACACCGCCGGACGCCGTTGCCACGCTGGACGCCGCCACAGTAATCACTCCGAGACACCATTACCCAGATTGCGCCATGGAAGAGGAAGAACCATCTAATAATCGCCGACGCTGACTGCGCCCAATTTCAGAAGCTACCCAGATTGGGAAAAAAATAAAAGGTGAGAATTTAATCTACCCTTGATGGTACTGTTATTTATTCACTTTAATGTATCTCTTATTTTAAATTTTTATGTTTGGTAGTTGTCAGTATAAAGAGATTTTTTAGCAGAAGCACTGCTAATATATCAGGACGAGATGGAAATGAAAATATAGAAGCAAGGAGAT]
[+] EMBL CB632071 [ACTCGCTTTCCGGCCGCGGCCGGCGTCGCATATCATTTCGCCTCCCTCTGTATCATCACTCCGCTCCACCCCCCACGTAGAACATCTGGCGCCAACTCCTTCTCGTCATGCCCATGCGGTGAAATCAGTTTCGTGAAGGGAAAAAAAAACCAAGGCCACTCCTAGCTTTGGCATCGATCGGTCCGGTTGTTTGGGGATCTTGCGCTCAGTAGCGAAGCCACCAGTATGGCGAGGTATGGCGGCCGCCATACCTGCCCACCGGCTGATCGCCTCCTCTCGTCGACAGTTGACTCGTCTCCTGCCGCGTGCCGCCCGATCTCCGACTCCAGGTCCAGGACACCGCCGGACGCCGTTGCCACGCTGGACGCCGCCACAGTAATCACTCCGAGACACCATTACCCAGATTGCGCCATGGAAGAGGAAGAACCATCTAATAATCGCCGACGCTGACTGCGCCCAATTTCAGAAGCTACCCAGATTGGGAAAAAAATAAAAGGTGAGAATTTAATCTACCCTTGATGGTACTGTTATTTATTCACTTTAATGTATCTCTTATTTTAAATTTTTATGTTTGGTAGTTGTCAGTATAAAGAGATTTTTTAGCAGAAGCACTGCTAATATATCAGGACGAGATGGAAATGAAAATATAGAAGCAAGGAGAT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_8254#2 TAACCCAAATCTACAAACCCCTCCCCCCCTTCCTCTCTCTCGTCCGTTCCGGCGCCGCCG 60
consensus_8254#3 ------------------------------------------------------------
consensus_8254#0 ----------------------------------------------------CGCCGCCG 8
consensus_8254#1 ------------TCCATTATTTTATTATATATGTATGTTTTCTTATACAAACTAGAGTAC 48
consensus_8254#2 TGTACTTGCCTTCCGGCCGCGGCCGG--CGTCGCATATCATTTCGCCTCCCT-CTGTATC 117
consensus_8254#3 ---ACTCGCTTTCCGGCCGCGGCCGG--CGTCGCATATCATTTCGCCTCCCT-CTGTATC 54
consensus_8254#0 TGTACTCGCCTTCCGGCCGCGGCCGG--CGTCGCATATCATTTCGCCTCCCT-CTGTATC 65
consensus_8254#1 TAGACTAGTACTTAGTCCGTAGTAAGTTCGCCATAGGTGAATTTTTATCCTGGCTTCGCC 108
*** * * * *** * * ** * * * * ** *** ** *
consensus_8254#2 ATCACT----CCGCTCCACCCCCCACGTAGAACATCTGGCGCCAACTCCTTCTCG--TCA 171
consensus_8254#3 ATCACT----CCGCTCCACCCCCCACGTAGAACATCTGGCGCCAACTCCTTCTCG--TCA 108
consensus_8254#0 ATCACT----CCGCTCCACCCCCCACGTAGAACATCTGGCGCCAACTCCTTCTCG--TCA 119
consensus_8254#1 ACTGCTTGCGCTGCTTCTGTTTGTATCTAGAGGGGATCGATCGAATACTTGGGAGACTCA 168
* ** * *** * * **** * * * ** * * * ***
consensus_8254#2 TGCCCATGCGGTGAAATCAG--TTTCGTGAAGGGAAAAAAAAACCAAGGCCA-----CTC 224
consensus_8254#3 TGCCCATGCGGTGAAATCAG--TTTCGTGAAGGGAAAAAAAAACCAAGGCCA-----CTC 161
consensus_8254#0 TGCCCATGCGGTGAAATCAG--TTTCGTG----GGAAAAAAAACCAAGGCCA-----CTC 168
consensus_8254#1 AATCCACA-AATTTCGTCAGCATTGCGTGCTGCTGCTGCAATACTGTGATCAGTGTTTTT 227
*** * **** ** **** ** ** * ** *
consensus_8254#2 CTAGCTT--TGGC--ATCGATCGGTCCGGTTGTTTGGGGATCTTGCGCTCAGTAGCGAA- 279
consensus_8254#3 CTAGCTT--TGGC--ATCGATCGGTCCGGTTGTTTGGGGATCTTGCGCTCAGTAGCGAA- 216
consensus_8254#0 CTAGCTT--TGGC--ATCGATCGGCCCGGTTGTTTGGGGATCTTGCGCTCAGTAGCGAA- 223
consensus_8254#1 TTGGTCTAATGGCTAAGCGAATGAATCCATGTCATGGGAAACTGGTCCCCAAGAACAAAA 287
* * * **** * *** * * * **** * ** * * ** * * **
consensus_8254#2 --GCCAC----CAGTATGGCGAGGTA--TGGCGGC-CGCCATACCTGCCCA-CCGGCTGA 329
consensus_8254#3 --GCCAC----CAGTATGGCGAGGTA--TGGCGGC-CGCCATACCTGCCCA-CCGGCTGA 266
consensus_8254#0 --GCCAC----CAGTATGGCGAGGTA--TGGCGGC-CGCCATACCTGCCCA-CCGGCTGA 273
consensus_8254#1 GAGCCATATTACAGTTTGATGACATTCCTGAGGATGTGGTGTTCTTGATAATCCGGTTGC 347
**** **** ** ** * ** * * * * ** * **** **
consensus_8254#2 TCGCCTC---------------------C-TCTCGTCG-ACAGTTGACTCGTCTCCTGCC 366
consensus_8254#3 TCGCCTC---------------------C-TCTCGTCG-ACAGTTGACTCGTCTCCTGCC 303
consensus_8254#0 TCGCCTCATCGCATCGGCTGTTCGCCTCC-TCTCGTCG-ACAGTTGACTCGTCTCCTGCC 331
consensus_8254#1 TTTCGCTGACTAATGCTGCGCGTGTCAGCATGGTGTCGCAAAAGTGGCTACAATCTTGGA 407
* * * * **** * * ** ** ** **
consensus_8254#2 GCGTGCCGCCCGATCTCCGACTCCAGGTCCAGGACACCG---CCGGACG--CCGTTGCC- 420
consensus_8254#3 GCGTGCCGCCCGATCTCCGACTCCAGGTCCAGGACACCG---CCGGACG--CCGTTGCC- 357
consensus_8254#0 GCGTGCCGCCCGATCTCCGACTCCAGGTCCAGGACACCG---CCGGACG--CCGTTGCC- 385
consensus_8254#1 G-GCTCTATCCTAATTTAGAGTTCACCTCGAAGGCGTTGGGTTTGAATAAACGGGTGCAC 466
* * * ** * * ** * ** ** * * * * * * * * ***
consensus_8254#2 --ACGCTGGACGCCGCCACA--------------------TTACCCAGATTGCGCCATGG 458
consensus_8254#3 --ACGCTGGACGCCGCCACAGTAATCACTCCGAGACACCATTACCCAGATTGCGCCATGG 415
consensus_8254#0 --ACGCTGGACGCCGCCACAGTAATCACTCCGAGACACCATTACCCAGATTGCGCCATGG 443
consensus_8254#1 AAACAAGGGAGGAGGGCTAAATTTGTCAGGTGTGTTAACACCATC-ATAAGGCACCACGC 525
** *** * * * * * * * * ** *** *
consensus_8254#2 AAGAGGAAGAACCATCTAATAATCGCCGACGC-TGACTGCGCC-----CAATTT--CAGA 510
consensus_8254#3 AAGAGGAAGAACCATCTAATAATCGCCGACGC-TGACTGCGCC-----CAATTT--CAGA 467
consensus_8254#0 AAGAGGAAGAACCATCTAATAATCGCCGACGC-CGACTGCGCC-----CAATTT--CAGA 495
consensus_8254#1 TGGAACAGGGATTAACTCATTCACCTTGAAGCGCAACCTCAACAATCACAACTTTCCATC 585
** * * * * ** ** * ** ** ** * * *** ** **
consensus_8254#2 AGCTACCCAGATTGGGAAAAAAATAAAAGAGG-GG---A--TCGATCGAATACTTGGGAG 564
consensus_8254#3 AGCTACCCAGATTGGGAAAAAAATAAAAGGTG-AG---AATTTAATCTACCCTTGATGGT 523
consensus_8254#0 AGCTACCCAGATTGGGAAAAAAATAAAAGTTG-ACTGCAGATCAGTGTTTTTTTGGTCTA 554
consensus_8254#1 CTCTAATGTTGCTGCTCCAGAACCAACCTCTATAGAGCATCTTAAGCTTTGCTTTATGAA 645
*** ** * ** ** * * *
consensus_8254#2 ACTCAAA--TCCACGAATTTC-GTCAGCATTGCGTGCTGCTGCTGCAATACTGTGATCAG 621
consensus_8254#3 ACTGTTA--TTTATTCACTTT-AAT-GTATCTCTTATT----TTAAATTTTTATGTTTGG 575
consensus_8254#0 ATGGCTA--AGCGAATGAATC-CATGTCATGGGAAACTGGT-CCCCAAGAACAAAAGAGC 610
consensus_8254#1 TTTGAGGCCTTTACCAACTTTTAGTGGCCTAAGAAGCT----TGAAGACTCTTGATTTGG 701
* * *
consensus_8254#2 TGTTTTTTTGGTCTA--ATGGCTAAGCGAATGAATCCATGTCATGGGAAACTGGTCCC-- 677
consensus_8254#3 TAGTTGTCAGTATAA--AGAGATTTTTTAGCAGAAGCACTGCTAATATATCAGGAC---- 629
consensus_8254#0 CATATTACAGTTTGA--TGACATTCCTGAGGATGTGGTGTTCTTGATAATCCGGTTGCTT 668
consensus_8254#1 CCCTTGTATGTATAACCACAGAAGATTTAGAGAGCTTGTTG-AGTTATACCCCTGCTCTA 760
* * * * * *
consensus_8254#2 -CAAGAACAAAAGAGCCATATTACAGTTTGATGACATTCCTGAGGATGTGGGTTCTTGAT 736
consensus_8254#3 --GAGATGGAAATGAAAATATAGAAGCAAGGAGAT------------------------- 662
consensus_8254#0 TCGCTGACTAATGCTGCGCGTGTCAGCATGGTGTCGCAAAAGTGGCTACAATCTTGGAGG 728
consensus_8254#1 CAACAGTTGAAGCTAAGGCAATGTCCNATGCTGGAATACTTGAAGATCA----------- 809
** * *
consensus_8254#2 AATCCGGTT--------------------------------------------------- 745
consensus_8254#3 ------------------------------------------------------------
consensus_8254#0 CTCTATCCTAATTTAGAGTTCACCTCGAAGGCGTTGGGTTTGAATAAACGGGTGCACAAA 788
consensus_8254#1 ------------------------------------------------------------
consensus_8254#2 ------------------------------------------------------------
consensus_8254#3 ------------------------------------------------------------
consensus_8254#0 CAAGGGAGGAGGGCTAAATTTGTCAGGTGTGTTAACACCATCATAAGGCACCACGCTGGA 848
consensus_8254#1 ------------------------------------------------------------
consensus_8254#2 ------------------------------------------------------------
consensus_8254#3 ------------------------------------------------------------
consensus_8254#0 ACAGGGATTAACTCATTCACCTTGAAGCGCAACCTCAACAATCACAAGTACGCACACTAT 908
consensus_8254#1 ------------------------------------------------------------
consensus_8254#2 ------------------------------------------------------------
consensus_8254#3 ------------------------------------------------------------
consensus_8254#0 ATTGACCGTTGGATTTACTTTGCAGTCCGATCTGGTGCAAATGAACTGACTATTGACCTA 968
consensus_8254#1 ------------------------------------------------------------
consensus_8254#2 ------------------------------------------------------------
consensus_8254#3 ------------------------------------------------------------
consensus_8254#0 AGTCCACGATGGTATGCTCATCCTCGTGATGTCAAATACAGCTTTCCATCCTCTAATGTT 1028
consensus_8254#1 ------------------------------------------------------------
consensus_8254#2 ------------------------------------------------------------
consensus_8254#3 ------------------------------------------------------------
consensus_8254#0 GCTGCTCCAGAACCAACCTCTATAGAGCATCTTAAGCTTTGCTTTATGAATTTGAGGCCT 1088
consensus_8254#1 ------------------------------------------------------------
consensus_8254#2 ------------------------------------------------------------
consensus_8254#3 ------------------------------------------------------------
consensus_8254#0 TTACCAACTTTTAGTGGCCTAAGAAGCTTGAAGACTCTTGATTTGGCCCTTGTATGTATA 1148
consensus_8254#1 ------------------------------------------------------------
consensus_8254#2 ------------------------------------------------------------
consensus_8254#3 ------------------------------------------------------------
consensus_8254#0 ACCACAGAAGATTTAGAGAGCTTGTTGAGTTATACCCCTGCTCTACAACAGTTGAAGCTA 1208
consensus_8254#1 ------------------------------------------------------------
consensus_8254#2 ------------------------------------------------------------
consensus_8254#3 ------------------------------------------------------------
consensus_8254#0 AGGCAATGTCCAATGCTGGAATACTTGAAGATCACTGATGTACTAGCTAAGCTTGTCTAC 1268
consensus_8254#1 ------------------------------------------------------------
consensus_8254#2 ------------------------------------------------------------
consensus_8254#3 ------------------------------------------------------------
consensus_8254#0 ATTGATATCGTTCCCTGCTTGTGGCTGAAGATTTTGGAGATCCATGCTCAAAATCTTGTT 1328
consensus_8254#1 ------------------------------------------------------------
consensus_8254#2 ------------------------------------------------------------
consensus_8254#3 ------------------------------------------------------------
consensus_8254#0 GCGATTAATACTTACAATATCTGTCACCTAAAAATAGTACTGAGTGAAGCATTAGTGTTG 1388
consensus_8254#1 ------------------------------------------------------------
consensus_8254#2 ------------------------------------------------------------
consensus_8254#3 ------------------------------------------------------------
consensus_8254#0 AAGGGGGCACACATTGAGTTAGTTCTGTCATCAGATGTTATTGAGTATGCTTTTACTGAT 1448
consensus_8254#1 ------------------------------------------------------------
consensus_8254#2 ------------------------------------------------------------
consensus_8254#3 ------------------------------------------------------------
consensus_8254#0 CTTGCACCACTCATGCCAGACCTCGAGTCATTGTTCCTGAGTGGCTGTACTGAGATGATT 1508
consensus_8254#1 ------------------------------------------------------------
consensus_8254#2 ------------------------------------------------------------
consensus_8254#3 ------------------------------------------------------------
consensus_8254#0 ATATCCAGGAGACCTCCAAGCAATAGATTCCATTGCCTGAAGCAATTGGAGTTAAAATTG 1568
consensus_8254#1 ------------------------------------------------------------
consensus_8254#2 ------------------------------------------------------------
consensus_8254#3 ------------------------------------------------------------
consensus_8254#0 CAGGATATATCGACGAAATATGATCTTCTATTTCTTGCTAAGTTTGTTGATGCTGCTCCA 1628
consensus_8254#1 ------------------------------------------------------------
consensus_8254#2 ------------------------------------------------------------
consensus_8254#3 ------------------------------------------------------------
consensus_8254#0 GTCCTAGAAGCTCTCGTTTTTCATCTGGAAGATATAGAGGAGCCATTTTGTTACATGGAA 1688
consensus_8254#1 ------------------------------------------------------------
consensus_8254#2 ------------------------------------------------------------
consensus_8254#3 ------------------------------------------------------------
consensus_8254#0 AAGGAAGCAGAGTTGAGAAGTCTGGAGAAACATTGTCCACATAAAAACCTCAAGTTGGTC 1748
consensus_8254#1 ------------------------------------------------------------
consensus_8254#2 ------------------------------------------------------------
consensus_8254#3 ------------------------------------------------------------
consensus_8254#0 AAAATGACTGGATTTTCAGCAGGCCGTTCAAGCCTTGAGCTTGCTCTGTATTTCGTGGAG 1808
consensus_8254#1 ------------------------------------------------------------
consensus_8254#2 ------------------------------------------------------------
consensus_8254#3 ------------------------------------------------------------
consensus_8254#0 AACTCACCAGCACTAGAACTCCTGATTCTTGATCATCGGCTTGACAGATCTGTTTGCCGA 1868
consensus_8254#1 ------------------------------------------------------------
consensus_8254#2 ------------------------------------------------------------
consensus_8254#3 ------------------------------------------------------------
consensus_8254#0 ATCACTTTTGGTGGTGACTTGGATGCGAAATGCTCGAAAGGATATGAACACACTATCTCC 1928
consensus_8254#1 ------------------------------------------------------------
consensus_8254#2 ------------------------------------------------------------
consensus_8254#3 ------------------------------------------------------------
consensus_8254#0 AAATATGTTAGCAATGCGATTCCTCGCCGTGTTAGATTATCATATTCCTAATGTAGCACA 1988
consensus_8254#1 ------------------------------------------------------------
consensus_8254#2 ------------------------------------------------------------
consensus_8254#3 ------------------------------------------------------------
consensus_8254#0 AACAAGTTGCACGTGGTGCGAGTTGCAGTGCTAGGACTGCTACAGTAGAAATTAAAATTG 2048
consensus_8254#1 ------------------------------------------------------------
consensus_8254#2 ------------------------------------------------------------
consensus_8254#3 ------------------------------------------------------------
consensus_8254#0 CAACGACAGCTGTATAAATTGTAAGATGTTTTGGTCTCTCAATCTATGATGTGATCAGGT 2108
consensus_8254#1 ------------------------------------------------------------
consensus_8254#2 ------------------------------------------------------------
consensus_8254#3 ------------------------------------------------------------
consensus_8254#0 AATTAAATGACACATGAGTGCAGTAAAAGTGCAAGTATATAGTAGATCAATGGCAATGGG 2168
consensus_8254#1 ------------------------------------------------------------
consensus_8254#2 ----------------------------------------------
consensus_8254#3 ----------------------------------------------
consensus_8254#0 CAATGAGATGTACTACCTCCATTTTTTTTAATAGATGACGCCGTTG 2214
consensus_8254#1 ----------------------------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||