cluster # 8272

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Oryza sativa
cluster # 8272 cluster # 8272 Sequences # 5 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8272#0 length = 1544 sequences # 5
consensusID : consensus_8272#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1544
fasta sequence
                              [TTGGCCATTTTCTCAAGCACCTAATTTGCTTGGATCCTTCTTGCACTTGCAACTTGCAAAACAACCAAAGGAAATACTAGTAGCATCATCAAGCGAAGAAGGTCAGCTCAAAAGGGCGTTGTGTGCTTCGCCTCGCGAAATGAGAGTCGCATTGCTCCGGAGATGATGGTCGCCGGAGTAATCAGGAGCAACCAGGATGGCGGCGGCGGCGGCGGGACGGTGTCCGGTGCGGCGAGGATTAGCCCGGCGGTGGTGTTCGTCCTGGTGATATTGGCTGTGGTGCTGTTCGTGTCCGGGTTGCTGCATCTTCTTGTCAGATTCTTGCTCAGGCGCGGCCGTGGGCGAGATGGCGGCGGCGGCGGCGACGCGGAGGCGGCGGAGGGTGTGGAGGAGTCGGCGTTGCAACGGCAGCTGCAGCAGCTGTTCCACCTGCACGACGCCGGGCTGGACCAGGACGTCATCGACGCGCTCCCGGTGTTCATGTACCGGGAGGTGGTGGTCGGCGTCGGCGGCGGCGGCGGCGCGGGCGGCGGAGCCAAGGAGCCGTTCGACTGCGCGGTCTGCCTGTGCGAGTTCGCCGGCGACGACCGGCTCCGGCTGCTGCCGGTGTGCGGCCACGCGTTCCACATCGACTGCATCGACACGTGGCTGCTCTCCAACTCCACGTGCCCGCTCTGCCGCGCCGCGCTCGGCGCCGACGCCGCCGCTCTGTTCGACGCCGCGTTCGACGAGATGGCCGACGAGGAGGACCGGAAGCAGCAGGAGGACGCCGTGTTCCCCGTCCGCCTCGGCAAGTTCAAGAACCTCTCCAGGGCGGTCGGCCCCGTCCACGACCGCGACGACGCCGCCGCCGCCGCCGCCGGCGTCGGCGTCGGCGGTGGCATTATCACGCGAGAGGAAGGCGAGTCGAGCAGCAGCAGCTTGGACGCCAGGCGGTGCTTCTCCATGGGCTCCTACCAGTACGTCCTCGCCGAGGCGAGCTTGCAGGTGTCCGTACACCGGAGGCACGGCGACGGCAATGGCAGGGCGAGGCTGAGAGGGCTCGCCGGCGCCAACCCGGCCGGCAACGACGCCGCCGCCGCCGCCGACGGGAAGAAGATCGGCGCCGGCAGCAAGGGCGACAGCTTCTCGGTGTCCAAGATTTGGCAGTGGCCGCGGCAAGGCAAGGGGAAGCTGCCGGTGCTCGCCTCCGACGACTCGCCGGCGGTGGACGGCCGGCTGCCGTGGCCGAGGAGAAGCCCCGGGGCTTCCTGATGCTGATTTCCATGGTGTGTTTGCAATTTGCAAAACTTTTTCAGAGCTAATTCTGCTCATCTTTTTAACACCGTATTAATCAATCTGTTCATAGCCAATTCGTTCCATTCTACTTTTGCTGTTCGATTGCATCACCTCGTGTGTTCATGATGAACAAATAGCTTCATATAGAGGATTTCTTACTCTGCAGAATTAGTATTGGTAGTTGCAATACTAAACAAAAGAGGCTAAATTTATGAACAAAAATACTAGTTTATTTCCTATGGGCTATGGATATCCACCATTTGCAA]

[+] EMBL AK100240             [TTGGCCATTTTCTCAAGCACCTAATTTGCTTGGATCCTTCTTGCACTTGCAACTTGCAAAACAACCAAAGGAAATACTAGTAGCATCATCAAGCGAAGAAGGTCAGCTCAAAAGGGCGTTGTGTGCTTCGCCTCGCGAAATGAGAGTCGCATTGCTCCGGAGATGATGGTCGCCGGAGTAATCAGGAGCAACCAGAATGGCGGCGGCGGCGGCGGGACGGTGTCCGGTGCGGCGAGGATTAGCCCGGCGGTGGTGTTCGTCCTGGTGATATTGGCTGTGGTGCTGTTCGTGTCCGGGTTGCTGCATCTTCTTGTCAGATTCTTGCTAAGGCGCGGCCGTGGGCGAGATGGCGGCGGCGGCGGCGACGCGGAGGCGGCGGAGGGTGTGGAGGAGTCGGCGTTGCAACGGCAGCTGCAGCAGCTGTTCCACCTGCACGACGCCGGGCTGGACCAGGACGTCATCGACGCGCTCCCGGTGTTCATGTACCGGGAGGTGGTGGTCGGCGTCGGCGGCGGCGGCGGCGCGGGCGGCGGAGCCAAGGAGCCGTTCGACTGCGCGGTCTGCCTGTGCGAGTTCGCCGGCGACGACCGGCTCCGGCTGCTGCCGGTGTGCGGCCACGCGTTCCACATCGACTGCATCGACACGTGGCTGCTCTCCAACTCCACGTGCCCGCTCTGCCGCGCCGCGCTCGGCGCCGACGCCGCCGCTCTGTTCGACGCCGCGTTCGACGAGATGGCCGACGAGGAGGACCGGAAGCAGCAGGAGGACGCCGTGTTCCCCGTCCGCCTCGGCAAGTTCAAGAACCTCTCCAGGGCGGTCGGCCCCGTCCACGACCGCGACGACGCCGCCGCCGCCGCCGCCGGCGTCGGCGTCGGCGGTGGCATTATCACGCGAGAGGAAGGCGAGTCGAGCAGCAGCAGCTTGGACGCCAGGCGGTGCTTCTCCATGGGCTCCTACCAGTACGTCCTCGCCGAGGCGAGCTTGCAGGTGTCCGTACACCGGAGGCACGGCGACGGCAATGGCAGGGCGAGGCTGAGAGGGCTCGCCGGCGCCAACCCGGCCGGCAACGACGCCGCCGCCGCCGCCGACGGGAAGAAGATCGGCGCCGGCAGCAAGGGCGACAGCTTCTCGGTGTCCAAGATTTGGCAGTGGCCGCGGCAAGGCAAGGGGAAGCTGCCGGTGCTCGCCTCCGACGACTCGCCGGCGGTGGACGGCCGGCTGCCGTGGCCGAGGAGAAGCCCCGGGGCTTCCTGATGCTGATTTCCATGGTGTGTTTGCAATTTGCAAAACTTTTTCAGAGCTAATTCTGCTCATCTTTTTAACACCGTATTAATCAATCTGTTCATAGCCAATTCG                                                                                                                                                                                            ]
[+] EMBL CB647843             [               AGCACCTAATTTGCTTGGATCCTTCTTGCACTTGCAACTTGCAAAACAACCAAAGGAAATACTAGTAGCATCATCAAGCGAAGAAGGTCAGCTCAAAAGGGCGTTGTGTGCTTCGCCTCGCGAAATGAGAGTCGCATTGCTCCGGAGATGATGGTCGCCGGAGTAATCAGGAGCAACCAGGATGGCGGCGGCGGCGGCGGGACGGTGTCCGGTGCGGCGAGGATTAGCCCGGCGGTGGTGTTCGTCCTGGTGATATTGGCTGTGGTGCTGTTCGTGTCCGGGTTGCTGCATCTTCTTGTCAGATTCTTGCTCAGGCGCGGCCGTGGGCGAGATGGCGGCGGCGGCGGCGACGCGGAGGCGGCGGAGGGTGTGGAGGAGTCGGCGTTGCAACGGCAGCTGCAGCAGCTGTTCCACCTGCACGACGCCGGGCTGGACCAGGACGTCATCGACGCGCTCCCGGTGTTCATGTACCGGGAGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CB646577             [               AGCACCTAATTTGCTTGGATCCTTCTTGCACTTGCAACTTGCAAAACAACCAAAGGAAATACTAGTAGCATCATCAAGCGAAGAAGGTCAGCTCAAAAGGGCGTTGTGTGCTTCGCCTCGCGAAATGAGAGTCGCATTGCTCCGGAGATGATGGTCGCCGGAGTAATCAGGAGCAACCAGGATGGCGGCGGCGGCGGCGGGACGGTGTCCGGTGCGGCGAGGATTAGCCCGGCGGTGGTGTTCGTCCTGGTGATATTGGCTGTGGTGCTGTTCGTGTCCGGGTTGCTGCATCTTCTTGTCAGATTCTTGCTCAGGCGCGGCCGTGGGCGAGATGGCGGCGGCGGCGGCGACGCGGAGGCGGCGGAGGGTGTGGAGGAGTCGGCGTTGCAACGGCAGCTGCAGCAGCTGTTCCACCTGCACGACGCCGGGCTGGACCAGGACGTCATCGACGCGCTCCCGGTGTTCATGTACCGGGAGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL CB647844             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 GGGAAGAAGATCGGCGCCGGCAGCAAGGGCGACAGCTTCTCGGTGTCCAAGATTTGGCAGTGGCCGCGGCAAGGCAAGGGGAAGCTGCCGGTGCTCGCCTCCGACGACTCGCCGGCGGTGGACGGCCGGCTGCCGTGGCCGAGGAGAAGCCCCGGGGCTTCCTGATGCTGATTTCCATGGTGTGTTTGCAATTTGCAAAACTTTTTCAGAGCTAATTCTGCTCATCTTTTTAACACCGTATTAATCAATCTGTTCATAGCCAATTCGTTCCATTCTACTTTTGCTGTTCGATTGCATCACCTCGTGTGTTCATGATGAACAAATAGCTTCATATAGAGGATTTCTTACTCTGCAGAATTAGTATTGGTAGTTGCAATACTAAACAAAAGAGGCTAAATTTATGAACAAAAATACTAGTTTATTTCCTATGGGCTATGGATATCCACCATTTGCAA]
[-] EMBL CB646578             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 GGGAAGAAGATCGGCGCCGGCAGCAAGGGCGACAGCTTCTCGGTGTCCAAGATTTGGCAGTGGCCGCGGCAAGGCAAGGGGAAGCTGCCGGTGCTCGCCTCCGACGACTCGCCGGCGGTGGACGGCCGGCTGCCGTGGCCGAGGAGAAGCCCCGGGGCTTCCTGATGCTGATTTCCATGGTGTGTTTGCAATTTGCAAAACTTTTTCAGAGGTAATTCTGCTCATCTTTTTAACACCGTATTAATCAATCTGTTCATAGCCAATTCGTTCCATTCTACTTTTGCTGTTCGATTGCATCACCTCGTGTGTTCATGATGAACAAATAGCTTCATATAGAGGATTTCTTACTCTGCAGAATTAGTATTGGTAGTTGCAATACTAAACAAAAGAGGCTAAATTTATGAACAAAAATACTAGTTTATTTCCTATGGGC                      ]




>consensus_8272#0
TTGGCCATTTTCTCAAGCACCTAATTTGCTTGGATCCTTCTTGCACTTGCAACTTGCAAA
ACAACCAAAGGAAATACTAGTAGCATCATCAAGCGAAGAAGGTCAGCTCAAAAGGGCGTT
GTGTGCTTCGCCTCGCGAAATGAGAGTCGCATTGCTCCGGAGATGATGGTCGCCGGAGTA
ATCAGGAGCAACCAGGATGGCGGCGGCGGCGGCGGGACGGTGTCCGGTGCGGCGAGGATT
AGCCCGGCGGTGGTGTTCGTCCTGGTGATATTGGCTGTGGTGCTGTTCGTGTCCGGGTTG
CTGCATCTTCTTGTCAGATTCTTGCTCAGGCGCGGCCGTGGGCGAGATGGCGGCGGCGGC
GGCGACGCGGAGGCGGCGGAGGGTGTGGAGGAGTCGGCGTTGCAACGGCAGCTGCAGCAG
CTGTTCCACCTGCACGACGCCGGGCTGGACCAGGACGTCATCGACGCGCTCCCGGTGTTC
ATGTACCGGGAGGTGGTGGTCGGCGTCGGCGGCGGCGGCGGCGCGGGCGGCGGAGCCAAG
GAGCCGTTCGACTGCGCGGTCTGCCTGTGCGAGTTCGCCGGCGACGACCGGCTCCGGCTG
CTGCCGGTGTGCGGCCACGCGTTCCACATCGACTGCATCGACACGTGGCTGCTCTCCAAC
TCCACGTGCCCGCTCTGCCGCGCCGCGCTCGGCGCCGACGCCGCCGCTCTGTTCGACGCC
GCGTTCGACGAGATGGCCGACGAGGAGGACCGGAAGCAGCAGGAGGACGCCGTGTTCCCC
GTCCGCCTCGGCAAGTTCAAGAACCTCTCCAGGGCGGTCGGCCCCGTCCACGACCGCGAC
GACGCCGCCGCCGCCGCCGCCGGCGTCGGCGTCGGCGGTGGCATTATCACGCGAGAGGAA
GGCGAGTCGAGCAGCAGCAGCTTGGACGCCAGGCGGTGCTTCTCCATGGGCTCCTACCAG
TACGTCCTCGCCGAGGCGAGCTTGCAGGTGTCCGTACACCGGAGGCACGGCGACGGCAAT
GGCAGGGCGAGGCTGAGAGGGCTCGCCGGCGCCAACCCGGCCGGCAACGACGCCGCCGCC
GCCGCCGACGGGAAGAAGATCGGCGCCGGCAGCAAGGGCGACAGCTTCTCGGTGTCCAAG
ATTTGGCAGTGGCCGCGGCAAGGCAAGGGGAAGCTGCCGGTGCTCGCCTCCGACGACTCG
CCGGCGGTGGACGGCCGGCTGCCGTGGCCGAGGAGAAGCCCCGGGGCTTCCTGATGCTGA
TTTCCATGGTGTGTTTGCAATTTGCAAAACTTTTTCAGAGCTAATTCTGCTCATCTTTTT
AACACCGTATTAATCAATCTGTTCATAGCCAATTCGTTCCATTCTACTTTTGCTGTTCGA
TTGCATCACCTCGTGTGTTCATGATGAACAAATAGCTTCATATAGAGGATTTCTTACTCT
GCAGAATTAGTATTGGTAGTTGCAATACTAAACAAAAGAGGCTAAATTTATGAACAAAAA
TACTAGTTTATTTCCTATGGGCTATGGATATCCACCATTTGCAA
clustalw multiple alignements is not computed in this case