cluster # 8278

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Oryza sativa
cluster # 8278 cluster # 8278 Sequences # 5 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_8278#0 length = 1993 sequences # 4

consensus_8278#1 length = 181 sequences # 1

consensusID : consensus_8278#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1993
fasta sequence

                              [GGACTAGAGTGCAAATTAAGCTGGGTGTGGGTGTGGGTCTGGGTCTGGGTGGAAGAGGAAAAGGATCTGTGTGTGATCGACACGACAGATCGGCATCGGCGGGCAGGGTAGAGTGAGATGGCCGCCGCCACCGCCGCGGTTTTTGCGCTGTTGATGGCGTCGGCGCTCGCTGGGGCTGCGGCCGGCGGCGACATCGTTCACCACGACGACGAGGCCCCCAAGATTCCAGGATGCTCCAACGACTTCATCCTGGTCAAAGTGCAAAGTTGGGTCAACGGCAAAGAGGATGATGAGTATGTTGGTGTTGGTGCTCGGTTTGGCCCGCAAATAGTGTCCAAGGAGAAACATGCAAATCGAACTAGACTTATGTTGGCAGATCCTATTGATTGTTGCACTTCTCCAAAAGAAAAGGTTTCTGGAGATATTCTTCTAGTCCAAAGAGGGAAATGCAAGTTCACGAAAAAAGCAAAGTTTGCAGAAGCTGCTGGTGCTTCTGGTATAATAATCATAAACCATGTCCATGAGCTGTACAAGATGGTCTGTGAAAAGAATGAAACAGATCTTGATATAAATATACCTGCAGTTCTTCTTCCAAGAGATGCTGGCTTCGCTTTACATACGGTTCTTACCAGTGGTAACTCAGTTTCTGTGCAGCAATACTCTCCAGATCGTCCTGTAGTTGATACTGCAGAGGTATTCCTTTGGCTTATGGCTGTTGGTACTGTCCTTTGTGCATCATACTGGTCCGCATGGAGTGCTAGAGAAGCACTTTGTGAACAAGAGAAGCTCCTCAAGGACGGACGTGAAGTTTTACTAAATGTTGAGAATGGAAGTTCTAGTGGCATGATAGATATCAATGTGGCATCAGCCATAATGTTTGTAGTGGTCGCGTCATGCTTCTTAATAATGCTTTACAAGATGATGTCTTCCTGGTTTGTGGAGCTACTGGTGGTAATTTTTTGCGTCGGTGGTGTTGAGGGCCTGCAAACATGCCTAGTGGCTCTATTATCAAGGTGGTTTAGAGCTGCTTCAGAATCCTTTTTTAAAGTGCCATTCTTTGGAGCTGTTTCATACCTTACTCTTGCAGTTTCCCCATTTTGCATTGTATTTGCTGTTCTTTGGGCTGTTCACCGTCATTTCACCTATGCCTGGATTGGACAAGATATCCTTGGTATTGCACTGATAATTACTGTTATCCAAATTGTTAGAGTACCTAACCTCAAGGTGGGTTCAGTTCTCCTCAGCTGTGCCTTCTTTTATGACATCTTCTGGGTGTTTGTCTCCAAGAGATGGTTTCATGAGAGCGTGATGATCGTGGTAGCTCGTGGTGACAAGACTGATGAAGACGGCGTCCCCATGTTACTAAAAATTCCACGAATGTTTGATCCATGGGGAGGATACAGCATCATTGGATTCGGTGACATCCTTCTACCTGGGCTGTTAGTTGCATTTGCATTAAGATATGATTGGGCTGCCAAGAAAAGCTTGCAAACTGGTTACTTTTTGTGGTCAATGGTGGCCTATGGTTCTGGACTCCTTATTACATATGTCGCCTTGAACCTTATGGACGGACATGGCCAACCTGCACTTCTCTACATAGTGCCCTTCACACTTGGTGCGCTGATATCACTTGGGTGGAAAAGAGGAGAACTGTGGAACCTATGGTCCAAAGGGGAGCCAGAGAGAGTATGCCCTCATCACATGCATATGCAGCCTCAGCCGAAGACGCCCCCACTAGTCCAGTAGATCCGTCATCTTGTTAATTAGTACTGTAGCTATCCGTCACCAGCTGCATCCGTTTGCCTAAGCGAGCTTAATGGTGTAAAAAATCGTCTCCTGCATGTTCTTAATTAGTAAGTATTAATCTCAATGAGTTGGTCGTTTGCTGCTTCTCTATAGTGAAAGATGTTTTTGGTTCGATAAACTAGTCATGAGTAGAATTCTCTGTAATTTACAACTACAGAAGAGAAGGGAACTATATATGCAAGCTTAT]

[+] EMBL AK064963             [GGACTAGAGTGCAAATTAAGCTGGGTGTGGGTGTGGGTCTGGGTCTGGGTGGAAGAGGAAAAGGATCTGTGTGTGATCGACACGACAGATCGGCATCGGCGGGCAGGGTAGAGTGAGATGGCCGCCGCCACCGCCGCGGTTTTTGCGCTGTTGATGGCGTCGGCGCTCGCTGGGGCTGCGGCCGGCGGCGACATCGTTCACCACGACGACGAGGCCCCCAAGATTCCAGGATGCTCCAACGACTTCATCCTGGTCAAAGTGCAAAGTTGGGTCAACGGCAAAGAGGATGATGAGTATGTTGGTGTTGGTGCTCGGTTTGGCCCGCAAATAGTGTCCAAGGAGAAACATGCAAATCGAACTAGACTTATGTTGGCAGATCCTATTGATTGTTGCACTTCTCCAAAAGAAAAGGTTTCTGGAGATATTCTTCTAGTCCAAAGAGGGGAATGCAAGTTCACGAAAAAGGCAAAGTTTGCAGAAGCTGCTGGTGCTTCTGGTATAATAATCATAAACCATGTCCATGAGCTGTACAAGATGGTCTGTGAAAAGAATGAAACAGATCTTGATATAAATATACCTGCAGTTCTTCTTCCAAGAGATGCTGGCTTCGCTTTACATACGGTTCTTACCAGTGGTAACTCAGTTTCTGTGCAGCAATACTCTCCAGATCGTCCTGTAGTTGATACTGCAGAGGTATTCCTTTGGCTTATGGCTGTTGGTACTGTCCTTTGTGCATCATACTGGTCCGCATGGAGTGCTAGAGAAGCACTTTGTGAACAAGAGAAGCTCCTCAAGGACGGACGTGAAGTTTTACTAAATGTTGAGAATGGAAGTTCTAGTGGCATGATAGATATCAATGTGGCATCAGCCATAATGTTTGTAGTGGTCGCGTCATGCTTCTTAATAATGCTTTACAAGATGATGTCTTCCTGGTTTGTGGAGCTACTGGTGGTAATTTTTTGCGTCGGTGGTGTTGAGGGCCTGCAAACATGCCTAGTGGCTCTATTATCAAGGTGGTTTAGAGCTGCTTCAGAATCCTTTTTTAAAGTGCCATTCTTTGGAGCTGTTTCATACCTTACTCTTGCAGTTTCCCCATTTTGCATTGTATTTGCTGTTCTTTGGGCTGTTCACCGTCATTTCACCTATGCCTGGATTGGACAAGATATCCTTGGTATTGCACTGATAATTACTGTTATCCAAATTGTTAGAGTACCTAACCTCAAGGTGGGTTCAGTTCTCCTCAGCTGTGCCTTCTTTTATGACATCTTCTGGGTGTTTGTCTCCAAGAGATGGTTTCATGAGAGCGTGATGATCGTGGTAGCTCGTGGTGACAAGACTGATGAAGACGGCGTCCCCATGTTACTAAAAATTCCACGAATGTTTGATCCATGGGGAGGATACAGCATCATTGGATTCGGTGACATCCTTCTACCTGGGCTGTTAGTTGCATTTGCATTAAGATATGATTGGGCTGCCAAGAAAAGCTTGCAAACTGGTTACTTTTTGTGGTCAATGGTGGCCTATGGTTCTGGACTCCTTATTACATATGTCGCCTTGAACCTTATGGACGGACATGGCCAACCTGCACTTCTCTACATAGTGCCCTTCACACTTGGTGCGCTGATATCACTTGGGTGGAAAAGAGGAGAACTGTGGAACCTATGGTCCAAAGGGGAGCCAGAGAGAGTATGCCCTCATCACATGCATATGCAGCCTCAGCCGAAGACGCCCCCACTAGTCCAGTAGATCCGTCATCTTGTTAATTAGTACTGTAGCTATCCGTCACCAGCTGCATCCGTTTGCCTAAGCGAGCTTAATGGTGTAAAAAATCGTCTCCTGCATGTTCTTAATTAGTAAGTATTAATCTCAATGAGTTGGTCGTTTGCTGCTTCTCTATAGTGAAAGATGTTTTTGGTTCGATAAACTAGTCATGAGTAGAATTCTCTGTAATTTACAACTACAGAAGAGAAGGGAACTATATATGCAAGCTTAT]
[+] EMBL AK099361             [                                                   GAAGAGGAAAAGGATCTGTGTGTGATCGACACGACAGATCGGCATCGGCGGGCAGGGTAGAGTGAGATGGCCGCCGCCACCGCCGCGGTTTTTGCGCTGTTGATGGCGTCGGCGCTCGCTGGGGCTGCGGCCGGCGGCGACATCGTTCACCACGACGACGAGGCCCCCAAGATTCCAGGATGCTCCAACGACTTCATCCTGGTCAAAGTGCAAAGTTGGGTCAACGGCAAAGAGGATGATGAGTATGTTGGTGTTGGTGCTCGGTTTGGCCCGCAAATAGTGTCCAAGGAGAAACATGCAAATCGAACTAGACTTATGTTGGCAGATCCTATTGATTGTTGCACTTCTCCAAAAGAAAAGGTTTCTGGAGATATTCTTCTAGTCCAAAGAGGGAAATGCAAGTTCACGAAAAAAGCAAAGTTTGCAGAAGCTGCTGGTGCTTCTGGTATAATAATCATAAACCATGTCCATGAGCTGTACAAGATGGTCTGTGAAAAGAATGAAACAGATCTTGATATAAATATACCTGCAGTTCTTCTTCCAAGAGATGCTGGCTTCGCTTTACATACGGTTCTTACCAGTGGTAACTCAGTTTCTGTGCAGCAATACTCTCCAGATCGTCCTGTAGTTGATACTGCAGAGGTATTCCTTTGGCTTATGGCTGTTGGTACTGTCCTTTGTGCATCATACTGGTCCGCATGGAGTGCTAGAGAAGCACTTTGTGAACAAGAGAAGCTCCTCAAGGACGGACGTGAAGTTTTACTAAATGTTGAGAATGGAAGTTCTAGTGGCATGATAGATATCAATGTGGCATCAGCCATAATGTTTGTAGTGGTCGCGTCATGCTTCTTAATAATGCTTTACAAGATGATGTCTTCCTGGTTTGTGGAGCTACTGGTGGTAATTTTTTGCGTCGGTGGTGTTGAGGGCCTGCAAACATGCCTAGTGGCTCTATTATCAAGGTGGTTTAGAGCTGCTTCAGAATCCTTTTTTAAAGTGCCATTCTTTGGAGCTGTTTCATACCTTACTCTTGCAGTTTCCCCATTTTGCATTGTATTTGCTGTTCTTTGGGCTGTTCACCGTCATTTCACCTATGCCTGGATTGGACAAGATATCCTTGGTATTGCACTGATAATTACTGTTATCCAAATTGTTAGAGTACCTAACCTCAAGGTGGGTTCAGTTCTCCTCAGCTGTGCCTTCTTTTATGACATCTTCTGGGTGTTTGTCTCCAAGAGATGGTTTCATGAGAGCGTGATGATCGTGGTAGCTCGTGGTGACAAGACTGATGAAGACGGCGTCCCCATGTTACTAAAAATTCCACGAATGTTTGATCCATGGGGAGGATACAGCATCATTGGATTCGGTGACATCCTTCTACCTGGGCTGTTAGTTGCATTTGCATTAAGATATGATTGGGCTGACAAGAAAAGCTTGCAAACTGGTTACTTTTTGTGGTCAATGGTGGCCTATGGTTCTGGACTCCTTATTACATATGTCGCCTTGAACCTTATGGACGGACATGGCCAACCTGCACTTCTCTACATAGTGCCCTTCACACTTGGTGCGCTGATATCACTTGGGTGGAAAAGAGGAGAACTGTGGAACCTATGGTCCAAAGGGGAGCCAGAGAGAGTATGCCCTCATCACATGCATATGCAGCCTCAGCCGAAGACGCCCCCACTAGTCCAGTAGATCCGTCATCTTGTTAATTAGTACTGTAGCTATCCGTCACCAGCTGCATCCGTTTGCCTAAGCGAGCTTAATGGTGTAAAAAATCGTCTCCTGCATGTTCTTAATTAGTAAGTATTAATCTCAATGAGTTGGTCGTTTGCTGCTTCTCTATAGTGAAAGATGTTTTTGGTTCGATAAACTAGTCATGAGTAGAATTCTCTGTAATTTACAACTACAGAAGAGAAGGGAA                  ]
[+] EMBL AK065172             [                                                      GAGGAAAAGGATCTGTGTGTGATCGTCACGACAGATCGGCATCGGCGGGCAGGGTAGAGTGAGATGGCCGCCGCCACCGCCGCGGTTTTTGCGCTGTTGATGGCGTCGGCGCTCGCTGGGGCTGCGGCCGGCGGCGACATCGTTCACCACGACGACGAGGCCCCCAAGATTCCAGGATGCTCCAACGACTTCATCCTGGTCAAAGTGCAAAGTTGGGTCAACGGCAAAGAGGATGATGAGTATGTTGGTGTTGGTGCTCGGTTTGGCCCGCAAATAGTGTCCAAGGAGAAACATGCAAATCGAACTAGACTTATGTTGGCAGATCCTATTGATTGTTGCACTTCTCCAAAAGAAAAGGTTTCTGGAGATATTCTTCTAGTCCAAAGAGGGAAATGCAAGTTCACGAAAAAAGCAAAGTTTGCAGAAGCTGCTGGTGCTTCTGGTATAATAATCATAAACCATGTCCATGAGCTGTACAAGATGGTCTGTGAAAAGAATGAAACAGATCTTGATATAAATATACCTGCAGTTCTTCTTCCAAGAGATGCTGGCTTCGCTTTACATACGGTTCTTACCAGTGGTAACTCAGTTTCTGTGCAGCAATACTCTCCAGATCGTCCTGTAGTTGATACTGCAGAGGTATTCCTTTGGCTTATGGCTGTTGGTACTGTCCTTTGTGCATCATACTGGTCCGCATGGAGTGCTAGAGAAGCACTTTGTGAACAAGAGAAGCTCCTCAAGGACGGACGTGAAGTTTTACTAAATGTTGAGAATGGAAGTTCTAGTGGCATGATAGATATCAATGTGGCATCAGCCATAATGTTTGTAGTGGTCGCGTCATGCTTCTTAATAATGCTTTACAAGATGATGTCTTCCTGGTTTGTGGAGCTACTGGTGGTAATTTTTTGCGTCGGTGGTGTTGAGGGCCTGCAAACATGCCTAGTGGCTCTATTATCAAGGTGGTTTAGAGCTGCTTCAGAATCCTTTTTTAAAGTGCCATTCTTTGGAGCTGTTTCATACCTTACTCTTGCAGTTTCCCCATTTTGCATTGTATTTGCTGTTCTTTGGGCTGTTCACCGTCATTTCACCTATGCCTGGATTGGACAAGATATCCTTGGTATTGCACTGATAATTACTGTTATCCAAATTGTTAGAGTACCTAACCTCAAGGTGGGTTCAGTTCTCCTCAGCTGTGCCTTCTTTTATGACATCTTCTGGGTGTTTGTCTCCAAGAGATGGTTTCATGAGAGCGTGATGATCGTGGTAGCTCGTGGTGACAAGACTGATGAAGACGGCGTCCCCATGTTACTAAAAATTCCACGAATGTTTGATCCATGGGGAGGATACAGCATCATTGGATTCGGTGACATCCTTCTACCTGGGCTGTTAGTTGCATTTGCATTAAGATATGATTGGGCTGCCAAGAAAAGCTTGCAAACTGGTTACTTTTTGTGGTCAATGGTGGCCTATGGTTCTGGACTCCTTATTACATATGTCGCCTTGAACCTTATGGACGGACATGGCCAACCTGCACTTCTCTACATAGTGCCCTTCACACTTGGTGCGCTGATATCACTTGGGTGGAAAAGAGGAGAACTGTGGAACCTATGGTCCAAAGGGGAGCCAGAGAGAGTATGCCCTCATCACATGCATATGCAGCCTCAGCCGAAGACGCCCCCACTAGTCCAGTAGATCCGTCATCTTGTTAATTAGTACTGTAGCTATCCGTCACCAGCTGCATCCGTTTGCCTAAGCGAGCTTAATGGTGTAAAAAATCGTCTCCTGCATGTTCTTAATTAGTAAGTATTAATCTCAATGAGTTGGTC                                                                                                                 ]
[+] EMBL AK062118             [                                                                                                        AGGGTAGAGTGAGATGGCCGCCGCCACCGCCGCGGTTTTTGCGCTGTTGATGGCGTCGGCGCTCGCTGGGGCTGCGGCCGGCGGCGACATCGTTCACCACGACGACGAGGCCCCCAAGATTCCAGGATGCTCCAACGACTTCATCCTGGTCAAAGTGCAAAGTTGGGTCAACGGCAAAGAGGATGATGAGTATGTTGGTGTTGGTGCTCGGTTTGGCCCGCAAATAGTGTCCAAGGAGAAACATGCAAATCGAACTAGACTTATGTTGGCAGATCCTATTGATTGTTGCACTTCTCCAAAAGAAAAGGTTTCTGGAGATATTCTTCTAGTCCAAAGAGGGAAATGCAAGTTCACGAAAAAAGCAAAGTTTGCAGAAGCTGCTGGTGCTTCTGGTATAATAATCATAAACCATGTCCATGAGCTGTACAAGATGGTCTGTGAAAAGAATGAAACAGATCTTGATATAAATATACCTGCAGTTCTTCTTCCAAGAGATGCTGGCTTCGCTTTACATACGGTTCTTACCAGTGGTAACTCAGTTTCTGTGCAGCAATACTCTCCAGATCGTCCTGTAGTTGATACTGCAGAGGTATTCCTTTGGCTTATGGCTGTTGGTACTGTCCTTTGTGCATCATACTGGTCCGCATGGAGTGCTAGAGAAGCACTTTGTGAACAAGAGAAGCTCCTCAAGGACGGACGTGAAGTTTTACTAAATGTTGAGAATGGAAGTTCTAGTGGCATGATAGATATCAATGTGGCATCAGCCATAATGTTTGTAGTGGTCGCGTCATGCTTCTTAATAATGCTTTACAAGATGATGTCTTCCTGGTTTGTGGAGCTACTGGTGGTAATTTTTTGCGTCGGTGGTGTTGAGGGCCTGCAAACATGCCTAGTGGCTCTATTATCAAGGTGGTTTAGAGCTGCTTCAGAATCCTTTTTTAAAGTGCCATTCTTTGGAGCTGTTTCATACCTTACTCTTGCAGTTTCCCCATTTTGCATTGTATTTGCTGTTCTTTGGGCTGTTCACCGTCATTTCACCTATGCCTGGATTGGACAAGATATCCTTGGTATTGCACTGATAATTACTGTTATCCAAATTGTTAGAGTACCTAACCTCAAGGTGGGTTCAGTTCTCCTCAGCTGTGCCTTCTTTTATGACATCTTCTGGGTGTTTGTCTCCAAGAGATGGTTTCATGAGAGCGTGATGATCGTGGTAGCTCGTGGTGACAAGACTGATGAAGACGGCGTCCCCATGTTACTAAAAATTCCACGAATGTTTGATCCATGGGGAGGATACAGCATCATTGGATTCGGTGACATCCTTCTACCTGGGCTGTTAGTTGCATTTGCATTAAGATATGATTGGGCTGCCAAGAAAAGCTTGCAAACTGGTTACTTTTTGTGGTCAATGGTGGCCTATGGTTCTGGACTCCTTATTACATATGTCGCCTTGAACCTTATGGACGGACATGGCCAACCTGCACTTCTCTACATAGTGCCCTTCACACTTGGTGCGCTGATATCACTTGGGTGGAAAAGAGGAGAACTGTGGAACCTATGGTCCAAAGGGGAGCCAGAGAGAGTATGCCCTCATCACATGCATATGCAGCCTCAGCCGAAGACGCCCCCACTAGTCCAGTAGATCCGTCATCTTGTTAATTAGTACTGTAGCTATCCGTCACCAGCTGCATCCGTTTGCCTAAGCGAGCTTAATGGTGTAAAAAATCGTCTCCTGCATGTTCTTAATTAGTAAGTATTAATCTCAATGAGTTGGTCGTTTGCTGCTTCTCTATAGTGAAAGATGTTTTTGGTTCGATAAACTAGTCATGAGTAGAATTCTCTGTAATTTACAACTACAGAAGAGAAGGGAACTATATATGCAAGCTTAT]




>consensus_8278#0
GGACTAGAGTGCAAATTAAGCTGGGTGTGGGTGTGGGTCTGGGTCTGGGTGGAAGAGGAA
AAGGATCTGTGTGTGATCGACACGACAGATCGGCATCGGCGGGCAGGGTAGAGTGAGATG
GCCGCCGCCACCGCCGCGGTTTTTGCGCTGTTGATGGCGTCGGCGCTCGCTGGGGCTGCG
GCCGGCGGCGACATCGTTCACCACGACGACGAGGCCCCCAAGATTCCAGGATGCTCCAAC
GACTTCATCCTGGTCAAAGTGCAAAGTTGGGTCAACGGCAAAGAGGATGATGAGTATGTT
GGTGTTGGTGCTCGGTTTGGCCCGCAAATAGTGTCCAAGGAGAAACATGCAAATCGAACT
AGACTTATGTTGGCAGATCCTATTGATTGTTGCACTTCTCCAAAAGAAAAGGTTTCTGGA
GATATTCTTCTAGTCCAAAGAGGGAAATGCAAGTTCACGAAAAAAGCAAAGTTTGCAGAA
GCTGCTGGTGCTTCTGGTATAATAATCATAAACCATGTCCATGAGCTGTACAAGATGGTC
TGTGAAAAGAATGAAACAGATCTTGATATAAATATACCTGCAGTTCTTCTTCCAAGAGAT
GCTGGCTTCGCTTTACATACGGTTCTTACCAGTGGTAACTCAGTTTCTGTGCAGCAATAC
TCTCCAGATCGTCCTGTAGTTGATACTGCAGAGGTATTCCTTTGGCTTATGGCTGTTGGT
ACTGTCCTTTGTGCATCATACTGGTCCGCATGGAGTGCTAGAGAAGCACTTTGTGAACAA
GAGAAGCTCCTCAAGGACGGACGTGAAGTTTTACTAAATGTTGAGAATGGAAGTTCTAGT
GGCATGATAGATATCAATGTGGCATCAGCCATAATGTTTGTAGTGGTCGCGTCATGCTTC
TTAATAATGCTTTACAAGATGATGTCTTCCTGGTTTGTGGAGCTACTGGTGGTAATTTTT
TGCGTCGGTGGTGTTGAGGGCCTGCAAACATGCCTAGTGGCTCTATTATCAAGGTGGTTT
AGAGCTGCTTCAGAATCCTTTTTTAAAGTGCCATTCTTTGGAGCTGTTTCATACCTTACT
CTTGCAGTTTCCCCATTTTGCATTGTATTTGCTGTTCTTTGGGCTGTTCACCGTCATTTC
ACCTATGCCTGGATTGGACAAGATATCCTTGGTATTGCACTGATAATTACTGTTATCCAA
ATTGTTAGAGTACCTAACCTCAAGGTGGGTTCAGTTCTCCTCAGCTGTGCCTTCTTTTAT
GACATCTTCTGGGTGTTTGTCTCCAAGAGATGGTTTCATGAGAGCGTGATGATCGTGGTA
GCTCGTGGTGACAAGACTGATGAAGACGGCGTCCCCATGTTACTAAAAATTCCACGAATG
TTTGATCCATGGGGAGGATACAGCATCATTGGATTCGGTGACATCCTTCTACCTGGGCTG
TTAGTTGCATTTGCATTAAGATATGATTGGGCTGCCAAGAAAAGCTTGCAAACTGGTTAC
TTTTTGTGGTCAATGGTGGCCTATGGTTCTGGACTCCTTATTACATATGTCGCCTTGAAC
CTTATGGACGGACATGGCCAACCTGCACTTCTCTACATAGTGCCCTTCACACTTGGTGCG
CTGATATCACTTGGGTGGAAAAGAGGAGAACTGTGGAACCTATGGTCCAAAGGGGAGCCA
GAGAGAGTATGCCCTCATCACATGCATATGCAGCCTCAGCCGAAGACGCCCCCACTAGTC
CAGTAGATCCGTCATCTTGTTAATTAGTACTGTAGCTATCCGTCACCAGCTGCATCCGTT
TGCCTAAGCGAGCTTAATGGTGTAAAAAATCGTCTCCTGCATGTTCTTAATTAGTAAGTA
TTAATCTCAATGAGTTGGTCGTTTGCTGCTTCTCTATAGTGAAAGATGTTTTTGGTTCGA
TAAACTAGTCATGAGTAGAATTCTCTGTAATTTACAACTACAGAAGAGAAGGGAACTATA
TATGCAAGCTTAT

consensusID : consensus_8278#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 181
fasta sequence

                              [GANCAGAATCGGNNTTCGGNCGGGCCAGGNNAAAGGNAAANGGCCNCCNCCNCCNCCNCGGGTTTTTGCNCTGTTNNTGGCGGTCGGGCNCTCNTTGGGGNTGGGGCCGGCGGGGNACATCGTTCACCACGACNACNAGGCCCCCAANATTCCAGGATGCTCCAACGACTTCATCCTGNTC]

[+] EMBL AU176437             [GANCAGAATCGGNNTTCGGNCGGGCCAGGNNAAAGGNAAANGGCCNCCNCCNCCNCCNCGGGTTTTTGCNCTGTTNNTGGCGGTCGGGCNCTCNTTGGGGNTGGGGCCGGCGGGGNACATCGTTCACCACGACNACNAGGCCCCCAANATTCCAGGATGCTCCAACGACTTCATCCTGNTC]




>consensus_8278#1
GANCAGAATCGGNNTTCGGNCGGGCCAGGNNAAAGGNAAANGGCCNCCNCCNCCNCCNCG
GGTTTTTGCNCTGTTNNTGGCGGTCGGGCNCTCNTTGGGGNTGGGGCCGGCGGGGNACAT
CGTTCACCACGACNACNAGGCCCCCAANATTCCAGGATGCTCCAACGACTTCATCCTGNT
C

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8278#0      GGACTAGAGTGCAAATTAAGCTGGGTGTGGGTGTGGGTCTGGGTCTGGGTGGAAGAGGAA 60
consensus_8278#1      ------------------------------------------------------------
                                                                                  

consensus_8278#0      AAGGATCTGTGTGTGATCGACACGACAGATCGGCATCGGCGGGCAGGGTAGAGTGAGATG 120
consensus_8278#1      --------------GANCAGAATCGGNNTTCGGN--CG--GGCCAGGNNAAAGGNAAANG 42
                                    ** *   *       ****   **  ** ****  * **  * * *

consensus_8278#0      GCCGCCGCCACCGCCGCGG-TTTTTGCGCTGTTGATGGCGTC--GGCGCTCGCTGGGGCT 177
consensus_8278#1      GCCNCCNCCNCCNCCNCGGGTTTTTGCNCTGTTNNTGGCGGTCGGGCNCTCNTTGGGGNT 102
                      *** ** ** ** ** *** ******* *****  *****    *** ***  ***** *

consensus_8278#0      GCGGCCGGCGGCGA-CATCGTTCACCACGACGACGAGGCCCCCAAGATTCCAGGATGCTC 236
consensus_8278#1      GGGGCCGGCGGGGNACATCGTTCACCACGACNACNAGGCCCCCAANATTCCAGGATGCTC 162
                      * ********* *  **************** ** ********** **************

consensus_8278#0      CAACGACTTCATCCTGGTCAAAGTGCAAAGTTGGGTCAACGGCAAAGAGGATGATGAGTA 296
consensus_8278#1      CAACGACTTCATCCTGNTC----------------------------------------- 181
                      **************** **                                         

consensus_8278#0      TGTTGGTGTTGGTGCTCGGTTTGGCCCGCAAATAGTGTCCAAGGAGAAACATGCAAATCG 356
consensus_8278#1      ------------------------------------------------------------
                                                                                  

consensus_8278#0      AACTAGACTTATGTTGGCAGATCCTATTGATTGTTGCACTTCTCCAAAAGAAAAGGTTTC 416
consensus_8278#1      ------------------------------------------------------------
                                                                                  

consensus_8278#0      TGGAGATATTCTTCTAGTCCAAAGAGGGAAATGCAAGTTCACGAAAAAAGCAAAGTTTGC 476
consensus_8278#1      ------------------------------------------------------------
                                                                                  

consensus_8278#0      AGAAGCTGCTGGTGCTTCTGGTATAATAATCATAAACCATGTCCATGAGCTGTACAAGAT 536
consensus_8278#1      ------------------------------------------------------------
                                                                                  

consensus_8278#0      GGTCTGTGAAAAGAATGAAACAGATCTTGATATAAATATACCTGCAGTTCTTCTTCCAAG 596
consensus_8278#1      ------------------------------------------------------------
                                                                                  

consensus_8278#0      AGATGCTGGCTTCGCTTTACATACGGTTCTTACCAGTGGTAACTCAGTTTCTGTGCAGCA 656
consensus_8278#1      ------------------------------------------------------------
                                                                                  

consensus_8278#0      ATACTCTCCAGATCGTCCTGTAGTTGATACTGCAGAGGTATTCCTTTGGCTTATGGCTGT 716
consensus_8278#1      ------------------------------------------------------------
                                                                                  

consensus_8278#0      TGGTACTGTCCTTTGTGCATCATACTGGTCCGCATGGAGTGCTAGAGAAGCACTTTGTGA 776
consensus_8278#1      ------------------------------------------------------------
                                                                                  

consensus_8278#0      ACAAGAGAAGCTCCTCAAGGACGGACGTGAAGTTTTACTAAATGTTGAGAATGGAAGTTC 836
consensus_8278#1      ------------------------------------------------------------
                                                                                  

consensus_8278#0      TAGTGGCATGATAGATATCAATGTGGCATCAGCCATAATGTTTGTAGTGGTCGCGTCATG 896
consensus_8278#1      ------------------------------------------------------------
                                                                                  

consensus_8278#0      CTTCTTAATAATGCTTTACAAGATGATGTCTTCCTGGTTTGTGGAGCTACTGGTGGTAAT 956
consensus_8278#1      ------------------------------------------------------------
                                                                                  

consensus_8278#0      TTTTTGCGTCGGTGGTGTTGAGGGCCTGCAAACATGCCTAGTGGCTCTATTATCAAGGTG 1016
consensus_8278#1      ------------------------------------------------------------
                                                                                  

consensus_8278#0      GTTTAGAGCTGCTTCAGAATCCTTTTTTAAAGTGCCATTCTTTGGAGCTGTTTCATACCT 1076
consensus_8278#1      ------------------------------------------------------------
                                                                                  

consensus_8278#0      TACTCTTGCAGTTTCCCCATTTTGCATTGTATTTGCTGTTCTTTGGGCTGTTCACCGTCA 1136
consensus_8278#1      ------------------------------------------------------------
                                                                                  

consensus_8278#0      TTTCACCTATGCCTGGATTGGACAAGATATCCTTGGTATTGCACTGATAATTACTGTTAT 1196
consensus_8278#1      ------------------------------------------------------------
                                                                                  

consensus_8278#0      CCAAATTGTTAGAGTACCTAACCTCAAGGTGGGTTCAGTTCTCCTCAGCTGTGCCTTCTT 1256
consensus_8278#1      ------------------------------------------------------------
                                                                                  

consensus_8278#0      TTATGACATCTTCTGGGTGTTTGTCTCCAAGAGATGGTTTCATGAGAGCGTGATGATCGT 1316
consensus_8278#1      ------------------------------------------------------------
                                                                                  

consensus_8278#0      GGTAGCTCGTGGTGACAAGACTGATGAAGACGGCGTCCCCATGTTACTAAAAATTCCACG 1376
consensus_8278#1      ------------------------------------------------------------
                                                                                  

consensus_8278#0      AATGTTTGATCCATGGGGAGGATACAGCATCATTGGATTCGGTGACATCCTTCTACCTGG 1436
consensus_8278#1      ------------------------------------------------------------
                                                                                  

consensus_8278#0      GCTGTTAGTTGCATTTGCATTAAGATATGATTGGGCTGCCAAGAAAAGCTTGCAAACTGG 1496
consensus_8278#1      ------------------------------------------------------------
                                                                                  

consensus_8278#0      TTACTTTTTGTGGTCAATGGTGGCCTATGGTTCTGGACTCCTTATTACATATGTCGCCTT 1556
consensus_8278#1      ------------------------------------------------------------
                                                                                  

consensus_8278#0      GAACCTTATGGACGGACATGGCCAACCTGCACTTCTCTACATAGTGCCCTTCACACTTGG 1616
consensus_8278#1      ------------------------------------------------------------
                                                                                  

consensus_8278#0      TGCGCTGATATCACTTGGGTGGAAAAGAGGAGAACTGTGGAACCTATGGTCCAAAGGGGA 1676
consensus_8278#1      ------------------------------------------------------------
                                                                                  

consensus_8278#0      GCCAGAGAGAGTATGCCCTCATCACATGCATATGCAGCCTCAGCCGAAGACGCCCCCACT 1736
consensus_8278#1      ------------------------------------------------------------
                                                                                  

consensus_8278#0      AGTCCAGTAGATCCGTCATCTTGTTAATTAGTACTGTAGCTATCCGTCACCAGCTGCATC 1796
consensus_8278#1      ------------------------------------------------------------
                                                                                  

consensus_8278#0      CGTTTGCCTAAGCGAGCTTAATGGTGTAAAAAATCGTCTCCTGCATGTTCTTAATTAGTA 1856
consensus_8278#1      ------------------------------------------------------------
                                                                                  

consensus_8278#0      AGTATTAATCTCAATGAGTTGGTCGTTTGCTGCTTCTCTATAGTGAAAGATGTTTTTGGT 1916
consensus_8278#1      ------------------------------------------------------------
                                                                                  

consensus_8278#0      TCGATAAACTAGTCATGAGTAGAATTCTCTGTAATTTACAACTACAGAAGAGAAGGGAAC 1976
consensus_8278#1      ------------------------------------------------------------
                                                                                  

consensus_8278#0      TATATATGCAAGCTTAT 1993
consensus_8278#1      -----------------