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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8306#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 3124 fasta sequence
[AGGATAGGGGCCTACCATGGTGGTGACGGGTGACGGAGAATTAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGGCTACCACATCCAAGGAAGGCAGCGACTCTTTTGCCCCCCTCCCCTCCCCTCCCCTCCGGATCCATCCACGAAAATCTCCTCCCCCTCCGATTCCACCGCGCCGCACCGATGGCACGAACCCCACGCAAGCGCCGCCGCCGCCGCGGCGGAGGGGGCCACGACTACCTCTCCGGCCTCCCCGACGACGTCATCCTCGCCATCCTCTCCCGCCTCACGACCCGCCAGGCCGTCACGCTCTCCGCCCTCTCCCGCCGCTTCCGCGTCCTCCCGTCCCAGTTCGGCCGCGTCGACTCCGCGCTCGTCGCCGACCCGGCCCTGCCGCTCCCGTCGCTCCCCGCGCGGCCGTCCTTCATCCGCCGCCTCTCCTTCGCCCCCCAGACCCGCCGGTTCTCCTCCTCCGCGTTCGGCCGCCTCCTCGACGCCGCCGCCGACCGCGGCCTCTCCGAGCTCGCCGTCCGCCTGCCCCGCAGCGCGTTCCTTCCCCAGAACCTCCTCTCCATCCGCTCCCTCACCGTGGTCTCCCTCGACTCCTGCGCGCTCCCGCGATGGTGCCCCGCCGCGTGCCCTGGCCTCCGCACGCTCAAGCTCCACCACGTTGCCATCCCGCAGCGGATGATCAGCGTCATCCTCAAGGCCGCGCCCGTGCTCGAGACGCTGGAGATGGTGTACTGCATGGGATTCGCCGGCAGCTGCAGTATGGAGTCCTCCACGGTGAGGAACCTCCTGTTTAAGTCGGCTCTGGAGCAGCGTGAGGTCACGGTGAAAATGGCGGGTCTGAGGACGATCACGCTGTACACGCGCCCCAAGGTGCAGTCGGTTCGGCTGGATCCTGCACCGGAAATCAGGAAGGCATACCTGCACATCGCCAGGCCGCGCGTCAAACTGCAGTTCAGGATACGGCCGTTCTTGGATGCTGGCACGGGGTTGACCTGCCTCACGCTCAGGGGCATGGCCATCAAGTTGTTGTCATCTGAATATAAAGACACTCCAAACTTGGCTGTACAATTTGAAGACTTGAGAATACTGTCAGTGAGCTTGGATTTCTCAAATGAAAGAGAACTCATCTTCCTTCTGAAGCTGCTTGAGAGTTGCCCCAACCTGCAACAGTTGACTCTTTCGGCTGTTGATGCAAAAGACGACACTGCATTGCCAAATTTTGCTGATCATGAGGAGAGGCTTTCAAAGTTATCATGCCTAACTAAGAGTTTGGAGCAGCTCAAGTTTCTTGGATTCAGGCCTCAACGGTACCAGAAGGAACTCTTTATCTTTCTGCTAACTCAAGCAACGAACCTGAAGAAGATGGCGGTGGAGTTCCCGAAAGACCAAGAAGCTGCTGTGAGGAGAATTTTGTCAGTGAGGAAAGCCCCCACTCAGAAGAAAACTACCAAGTACAAACAATACTACTTGGAGTTAGAGTATCCTGTGGAGCCCAACTGCTCATAGGGCTCTCAAGTCGCTACATGACTGGTCTCTCTTGGACATACATTCACTCCCTAGACTTTAACCCTTAGGTTGCAATTCTCTTTACAGAGATCACACGCCGGAAAAGTTCTTATTCATTGGCTTCAGGATGTAACAAAACATTTGAGATGCTTTATTGCTTCGTGC-GTTATGTAATTTTCAATTTTTTGTGTTACAATGTTATACAGGGAAGTATGAGAATACATGGGGTTACGAGTACTTAAAACATGCTTGTGAGGATGATGAACATCTATTTCTGCTGCCAATTACTCTGAAGTTCTGCCATAGACTGTGTGCTCAAATTTGCCACTCCATCTGTTGGAATCGTCAGATGGGACTTGGAGCTCCTTTTCTGAACTGAATGGTTCGAAAAGACGGTCGATGTCCTCGTTCTTGACCTCCTCAAGGGTAGCAGGACTCCACTTAGGGGCATTGTCTTTGTCGATGCTGAGAGCTCTAATTCCCTCATAGACATCGCCAGTAACTACAGATCGGAGAGTGTTCATTGTAAGTCGGAATTCCTTCTTCAAACATTCCGGCAGGCTCTGCTTCCGACCTTCTCTGATCGATCGAAGAGTCATCTTCAGTGAAGTAGGAGATGATCTTCGCATGCCCTTCAGTACTGTAGCGATCCATTGGTTTCCATCAATGCTCCCTTCTGATTCAAAAGCTTTTATGATGTCCTCGATAGTCTCAGCAGAGAAACATTTGTTGATAGTTGGGAGCTTGTTTAAAATACTATCTTCATCAGGTTGAACATCAGTTGAGAACTCTTCAATAGCAGCTCGAACAGCAGACTCATCTCCTGTGTTTAAATTCAGCAGGCATTTTTCAAGTTCTTCCAATTTTTCAGAAGGAACAAAATGAGTAGCAAGACCGGCAGCAATCATTTCCTTTGCATTCAACCTTGCACCGGTCAAAGCCAGGTACTCCCCTAAATATCCAGGGAGTCTAGAATGGATATAAGAAAAGCTGCAGTCTGTGTGTAATCCAACACTAGCCTCAGGGGTTGCGAAGACTGTTTTCTCTGTGACAACTGCAAACTTCAGTGGAGCAACCATGGCTGCACCACCACCCATGACAAGTCCATTAACAAGAGCCACCGCGGTTTTCTTATACGTGTGGATATGGTAGCAAAGCCAATACATCCTGTAAACAACCTCGAGACAGGAGTCATCTGATTTTCCTTCATAGAACATCTTTAGATCCCCACCAGCGGAAAATGCACGTCCAGCCCCCTTGAAGATGACCAGCTTGGCATCCTCATCTTTCTCCCAGCTCTCCAAGAACTGGGCGAGGAGATACACCACTCTATCGGAGATGACGTTCAGCTGGCGCGGCCGGTTGAGGATCGCCACCCTCGCGCCGCCGGTCTCCTGCCCGAGCACCACCTCGTCGGGATTCGCCTGCTGCTGCTGCTGCTCCGGCTCCGCCATCAGGGAGGGACCCGAATTCCGCGGGAAGGGAGCTCAGCTCGAGTTAGGTGCTCCAAGAGAACGAGTTGGGCGAAGCAGGCGTGGAGGGAAGTTTGGTGAGGGGGAGCCGGTGGAGGGGATGGTGTAGTAGTAGTGGTGGAGCGGTAGGCG]
[+] EMBL AK063352 [AGGATAGGGGCCTACCATGGTGGTGACGGGTGACGGAGAATTAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGGCTACCACATCCAAGGAAGGCAGCGACTCTTTTGCCCCCCTCCCCTCCCCTCCCCTCCGGATCCATCCACGAAAATCTCCTCCCCCTCCGATTCCACCGCGCCGCACCGATGGCACGAACCCCACGCAAGCGCCGCCGCCGCCGCGGCGGAGGGGGCCACGACTACCTCTCCGGCCTCCCCGACGACGTCATCCTCGCCATCCTCTCCCGCCTCACGACCCGCCAGGCCGTCACGCTCTCCGCCCTCTCCCGCCGCTTCCGCGTCCTCCCGTCCCAGTTCGGCCGCGTCGACTCCGCGCTCGTCGCCGACCCGGCCCTGCCGCTCCCGTCGCTCCCCGCGCGGCCGTCCTTCATCCGCCGCCTCTCCTTCGCCCCCCAGACCCGCCGGTTCTCCTCCTCCGCGTTCGGCCGCCTCCTCGACGCCGCCGCCGACCGCGGCCTCTCCGAGCTCGCCGTCCGCCTGCCCCGCAGCGCGTTCCTTCCCCAGAACCTCCTCTCCATCCGCTCCCTCACCGTGGTCTCCCTCGACTCCTGCGCGCTCCCGCGATGGTGCCCCGCCGCGTGCCCTGGCCTCCGCACGCTCAAGCTCCACCACGTTGCCATCCCGCAGCGGATGATCAGCGTCATCCTCAAGGCCGCGCCCGTGCTCGAGACGCTGGAGATGGTGTACTGCATGGGATTCGCCGGCAGCTGCAGTATGGAGTCCTCCACGGTGAGGAACCTCCTGTTTAAGTCGGCTCTGGAGCAGCGTGAGGTCACGGTGAAAATGGCGGGTCTGAGGACGATCACGCTGTACACGCGCCCCAAGGTGCAGTCGGTTCGGCTGGATCCTGCACCGGAAATCAGGAAGGCATACCTGCACATCGCCAGGCCGCGCGTCAAACTGCAGTTCAGGATACGGCCGTTCTTGGATGCTGGCACGGGGTTGACCTGCCTCACGCTCAGGGGCATGGCCATCAAGTTGTTGTCATCTGAATATAAAGACACTCCAAACTTGGCTGTACAATTTGAAGACTTGAGAATACTGTCAGTGAGCTTGGATTTCTCAAATGAAAGAGAACTCATCTTCCTTCTGAAGCTGCTTGAGAGTTGCCCCAACCTGCAACAGTTGACTCTTTCGGCTGTTGATGCAAAAGACGACACTGCATTGCCAAATTTTGCTGATCATGAGGAGAGGCTTTCAAAGTTATCATGCCTAACTAAGAGTTTGGAGCAGCTCAAGTTTCTTGGATTCAGGCCTCAACGGTACCAGAAGGAACTCTTTATCTTTCTGCTAACTCAAGCAACGAACCTGAAGAAGATGGCGGTGGAGTTCCCGAAAGACCAAGAAGCTGCTGTGAGGAGAATTTTGTCAGTGAGGAAAGCCCCCACTCAGAAGAAAACTACCAAGTACAAACAATACTACTTGGAGTTAGAGTATCCTGTGGAGCCCAACTGCTCATAGGGCTCTCAAGTCGCTACATGACTGGTCTCTCTTGGACATACATTCACTCCCTAGACTTTAACCCTTAGGTTGCAATTCTCTTTACAGAGATCACACGCCGGAAAAGTTCTTATTCATTGGCTTCAGGATGTAACAAAACATTTGAGATGCTTTATTGCTTCGTGC GTTATGTAATTTTCAATTTTTTGTGTTACAATGTTATACAGGGAA ]
[+] EMBL CB644374 [ ACTACCTCTCCGGCCTCCCCGACGACGTCATCCTCGCCATCCTCTCCCGCCTCACGACCCGCCAGGCCGTCACGCTCTCCGCCCTCTCCCGCCGCTTCCGCGTCCTCCCGTCCCAGTTCGGCCGCGTCGACTCCGCGCTCGTCGCCGACCCGGCCCTGCCGCTCCCGTCGCTCCCCGCGCGGCCGTCCTTCATCCGCCGCCTCTCCTTCGCCCCCCAGACCCGCCGGTTCTCCTCCTCCGCGTTCGGCCGCCTCCTCGACGCCGCCGCCGACCGCGGCCTCTCCGAGCTCGCCGTCCGCCTGCCCCGCAGCGCGTTCCTTCCCCAGAACCTCCTCTCCATCCGCTCCCTCACCGTGGTCTCCCTCGACTCCTGCGCGCTCCCGCGATGGTGCCCCGCCGCGTGCCCTGGCCTCCGCACGCTCAAGCTCCACCACGTTGCCATCCCGCAGCGGATGATCAGCGTCATCCTCAAGGCCGCGCCCGTGCTCGAGACGCTGGAGATGGTGTACTGCATGGGATTCGCCGGCAGCTGCAGTATGGAGTCCTCCACGGTGAGGAACCTCCTGTTTAAGTCGGCTCTGGAGCAGCGTGAGGTCACGGTGAAAATGGCGGGTCTGAGGACGATCACGCTGTACACGCGCCCCAAGGTGCAGTCGGTTCGGCTGGATCCTGCACCGGAAATCAGGAAGGCATACCTGCACATCGCCAGGCCGCGCGTCAAACTGCAGTTCAAGATACGGCCGTTCTTGGATGCTGGCACGGGGTTGACCTGCCTCACGCTCAGGGGCATGGCCATCAAGTT ]
[-] EMBL CB644375 [ ATACCTGCACATCGCCAGGCCGCGCGTCAAACTGCAGTTCAGGATACGGCCGTTCTTGGATGCTGGCACGGGGTTGACCTGCCTCACGCTCAGGGGCATGGCCATCAAGTTGTTGTCATCTGAATATAAAGACACTCCAAACTTGGCTGTACAATTTGAAGACTTGAGAATACTGTCAGTGAGCTTGGATTTCTCAAATGAAAGAGAACTCATCTTCCTTCTGAAGCTGCTTGAGAGTTGCCCCAACCTGCAACAGTTGACTCTTTCGGCTGTTGATGCAAAAGACGACACTGCATTGCCAAATTTTGCTGATCATGAGGAGAGGCTTTCAAAGTTATCATGCCTAACTAAGAGTTTGGAGCAGCTCAAGTTTCTTGGATTCAGGCCTCAACGGTACCAGAAGGAACTCTTTATCTTTCTGCTAACTCAAGCAACGAACCTGAAGAAGATGGCGGTGGAGTTCCCGAAAGACCAAGAAGCTGCTGTGAGGAGAATTTTGTCAGTGAGGAAAGCCCCCACTCAGAAGAAAACTACCAAGTACAAACAATACTACTTGGAGTTAGAGTATCCTGTGGAGCCCAACTGCTCATAGGGCTCTCAAGTCGCTACATGACTGGTCTCTCTTGGACATACATTCACTCCCTAGACTTTAACCCTTAGGTTGCAATTCTCTTTACAGAGATCACACGCCGGAAAAGTTCTTATTCATTGGCTTCAGGATGTAACAAAACATTTGAGATGCTTTATTGCTTCGTGC GTTATGTAATTTTCAATTTTTTGTGTTACAATGTTATACAGGGAAGTATGAGAATACATGGGGTTA ]
[-] EMBL AU173532 [ ttttttTAACAAAACATTTGAGATGCTTTATTGCTTCGTGCAGTTATGTAATTTTCAATTTTTTGTGTTACAATGTTATACAGGGAAGTATGAGAATACATGGGGTTACGAGTACTTAAAACATGCTTGTGAGGATGATGAACATCTATTTCTGCTGCCAATTACTCTGAAGTTCTGCCATAGACTGTGTGCTCAAATTTGCCACTCCATCTGTTGGAATCGTCAGATGGGACTTGGAGCTCCTTTTCTGAACTGAATGGTTCGAAAAGACGGTCGATGTCCTCGTTCTTGACCTCCTCAAGGGTAGCAGGACTCCACTTAGGGGCATTGTCTTTGTCGATGCTGAGAGCTCTAATTCCCTCATAGACATCGCCAGTAACTACAGATCGGAGAGTGTTCATTGTAAGTCGGAATTCCTTCTTCAAACATT ]
[-] EMBL AK069590 [ TTGAGATGCTTTATTGCTTCGTGC GTTATGTAATTTTCAATTTTTTGTGTTACAATGTTATACAGGGAAGTATGAGAATACATGGGGTTACGAGTACTTAAAACATGCTTGTGAGGATGATGAACATCTATTTCTGCTGCCAATTACTCTGAAGTTCTGCCATAGACTGTGTGCTCAAATTTGCCACTCCATCTGTTGGAATCGTCAGATGGGACTTGGAGCTCCTTTTCTGAACTGAATGGTTCGAAAAGACGGTCGATGTCCTCGTTCTTGACCTCCTCAAGGGTAGCAGGACTCCACTTAGGGGCATTGTCTTTGTCGATGCTGAGAGCTCTAATTCCCTCATAGACATCGCCAGTAACTACAGATCGGAGAGTGTTCATTGTAAGTCGGAATTCCTTCTTCAAACATTCCGGCAGGCTCTGCTTCCGACCTTCTCTGATCGATCGAAGAGTCATCTTCAGTGAAGTAGGAGATGATCTTCGCATGCCCTTCAGTACTGTAGCGATCCATTGGTTTCCATCAATGCTCCCTTCTGATTCAAAAGCTTTTATGATGTCCTCGATAGTCTCAGCAGAGAAACATTTGTTGATAGTTGGGAGCTTGTTTAAAATACTATCTTCATCAGGTTGAACATCAGTTGAGAACTCTTCAATAGCAGCTCGAACAGCAGACTCATCTCCTGTGTTTAAATTCAGCAGGCATTTTTCAAGTTCTTCCAATTTTTCAGAAGGAACAAAATGAGTAGCAAGACCGGCAGCAATCATTTCCTTTGCATTCAACCTTGCACCGGTCAAAGCCAGGTACTCCCCTAAATATCCAGGGAGTCTAGAATGGATATAAGAAAAGCTGCAGTCTGTGTGTAATCCAACACTAGCCTCAGGGGTTGCGAAGACTGTTTTCTCTGTGACAACTGCAAACTTCAGTGGAGCAACCATGGCTGCACCACCACCCATGACAAGTCCATTAACAAGAGCCACCGCGGTTTTCTTATACGTGTGGATATGGTAGCAAAGCCAATACATCCTGTAAACAACCTCGAGACAGGAGTCATCTGATTTTCCTTCATAGAACATCTTTAGATCCCCACCAGCGGAAAATGCACGTCCAGCCCCCTTGAAGATGACCAGCTTGGCATCCTCATCTTTCTCCCAGCTCTCCAAGAACTGGGCGAGGAGATACACCACTCTATCGGAGATGACGTTCAGCTGGCGCGGCCGGTTGAGGATCGCCACCCTCGCGCCGCCGGTCTCCTGCCCGAGCACCACCTCGTCGGGATTCGCCTGCTGCTGCTGCTGCTCCGGCTCCGCCATCAGGGAGGGACCCGAATTCCGCGGGAAGGGAGCTCAGCTCGAGTTAGGTGCTCCAAGAGAACGAGTTGGGCGAAGCAGGCGTGGAGGGAAGTTTGGTGAGGGGGAGCCGGTGGAGGGGATGGTGTAGTAGTAGTGGTGGAGCGGTAGGCG]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||