cluster # 8343

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Oryza sativa
cluster # 8343 cluster # 8343 Sequences # 5 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8343#0 length = 2402 sequences # 5
consensusID : consensus_8343#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 2402
fasta sequence
                              [TCCACTCGATCTGCTACCTCCTGGACACGGCGACGTACGGCTGATCCGTCGTCCGGTGGCTGGGGTTCCTGGCGGGAGACGCCGGTCGTGCAGAGGTGCTCTTAAATTTATAATAATGAAGGATTTTATGAAACTTTATCATCAGCGGGAAATCCAGCTGCTTGTGCTCCTCAGCTTCACACTCCAAATGTTCCTCTTTTTCACCGGCAGTCTTCGGAGGCGCAACACCAATGTGTTCCTCAGGGTTTCTATCTGGACAGCTTATTTGGGAGCAGACTTCACAGCAGTTTATGCTCTTGGTTACCTCTCACGACACGATGATATTCAGAGGCAAATGTCAGGGGGAACCCAGCCACTAGCTTTCTTTTGGGCATCATTCCTCCTCATCCATCTTGGTGGGCAGGACAGCATCACCGCATTTTCAATGGCAGACAACAACTTGTGGCTGAGGCATCTCTTGAACTTGGTGGTGCAAGTAGTCCTAGCTGCATATGTTTTCTGGAAATCGCCAGCAAGGCACAGTGCAGAGCTTCTAGTTTCAGGTGTCCTTGTGTTCATTGCCGGAGTTACCAAGTATGGAGAAAGGACACTGTCTCTCAAGTATGGAAGGTTTAAAAGTCTCGAGAGCTCAACTGGAGATCACTACAAGAAACGGTTTCCGGAATTAAACGATTCGGATCATGGCTATTCTAAGGTAGTTTTGGATGCTCTATGTTCAATGCTAAATGTCCACAATGTCTTTGCAGCGCGTAACCCATTTGTTAATGGTCCAGAATCTAATTCCCCAGTTGTTATTGCTCGAGACACGGTACAGGGAACCAAAAAAATGCTCAAGGTGGTGGAGCTTGAGC-TTGCAATCATGTACGATGACCTCTACACAAAGGCTCTTGTGCTGAGAACAAGGATAGGCATGATTCTCCGATGCACCTCTCACGCATGTTCCCTCCTTGCTTTTGCACTGTTCCTTACATGTGACAAACGGAGGTACAACGGAGTTGATGTTGCGATCACCTATTCGCTGTTTATCGGAGGCTTTTTCCTTGATCTTTCTGCAGTGTTTATCTTCATAATGTCTCCATGGACTTGGGCGTGGTTGAAGGCTCAGAAATGCGACCGGCTGGCTAGCTTGTCCTGGTTCCTTTTTTCCAGTGATATTGGCTGGCCAGAGAAAAGGCCACGGTGGTCGAATTCCATCGGACAGTACAAGTTGCTGAACTGGGTTTCTGGTGGAGACCAGCCAAGATCATACAACCAGAAAGTGGTGGCTCTAGTGAGAAGATTGTCGGGTTTAGTCGGTGTTGGAAAAGAAGATTTGTTCTGGCTGAGCAAGACGTTGGACACTGAGCATGTGGAGGCCGATGAAAAGACGATGGAGTTTGTCGTAAAGGGGATTAGTAGCTTGAGCGATGAAGTCTCCGAGCAACAACAATGGCAGCATCTTGGCCCATTGCTGAAAAAGATACGGGTCTGTTTTGTCGCAGATATGGGATGTGCTATTGTGGTGATGCACATATTCACTCAAGTATATTTGAATGCAGTAGAAGCCGCGGCAGCGGGAGACGAAGGAGGGGGAGATGCAGATGATATGGTGGAGGTGTGCCGAAAACTGTCCAACTACATGATGTACCTCTTTGTCAACCACCCTTCCATGCTTCCGCTCAATGCCAGCTCCGAAGCCACCGTGGTTGAGTTTGCGAAATCGAGAGAGGAACTGTCTAGGACACAACAAGGAAGCAAGATGACCCTGGATGAGCTATACAACATTATACAGCAGAATAAGGATGGTGTGTCAA-GGCAAGGAACAATGGAGGAAATGTACAA-GATGATACTAGAAGAGGATGTCCAACCAAGCTGGGGTGCAGTGGAGGAGATGGCAGCAATGTGGCTGCGGTTCCTCATCTTCGCCGCCGGCAGGTCCAATGGTAAGGTGCACGCGGCGGAGCTGGCCAGCGGAGGGGAGCTCATCACCTTCGCCTGGCTGCTCATGGCCCGGGAAGGGCTCGGCGAATCCGAGAGGAGAAGGGTCCGGCTGACGTCCACCATATCGTCCATTTCGTCTGCTGATTCTGCTGGTGCTGCAGCTGATTTGAAGGAAGCATATGCGTTCTTTTTCAACTGATTAAAGTTTGAAAGTTTGATTAGTACTTTAGCTGATTTGAGTAGCTTTGTTTGTTGTTCCCTACATCTTTATAATCTAAAGCTATGTATGAAGTAGAGTTAGGATTAATAACCAGCAATCTTCCTGTGATAAGAGATAATGCATGGCTGATATGATTTGGGCTTTCTATAGCTGCCAGCCCCTATATATATCCC-AGATTTTCTCCTTCCTTTTCTCTTGACTGTAACCGTATCTGTGTAATACTTCGCCATATATACAGTTGTAAGAAGTTGAACAAGATTGT]

[+] EMBL AK065026             [TCCACTCGATCTGCTACCTCCTGGACACGGCGACGTACGGCTGATCCGTCGTCCGGTGGCTGGGGTTCCTGGCGGGAGACGCCGGTCGTGCAGAGGTGCTCTTAAATTTATAATAATGAAGGATTTTATGAAACTTTATCATCAGCGGGAAATCCAGCTGCTTGTGCTCCTCAGCTTCACACTCCAAATGTTCCTCTTTTTCACCGGCAGTCTTCGGAGGCGCAACACCAATGTGTTCCTCAGGGTTTCTATCTGGACAGCTTATTTGGGAGCAGACTTCACAGCAGTTTATGCTCTTGGTTACCTCTCACGACACGATGATATTCAGAGGCAAATGTCAGGGGGAACCCAGCCACTAGCTTTCTTTTGGGCATCATTCCTCCTCATCCATCTTGGTGGGCAGGACAGCATCACCGCATTTTCAATGGCAGACAACAACTTGTGGCTGAGGCATCTCTTGAACTTGGTGGTGCAAGTAGTCCTAGCTGCATATGTTTTCTGGAAATCGCCAGCAAGGCACAGTGCAGAGCTTCTAGTTTCAGGTGTCCTTGTGTTCATTGCCGGAGTTACCAAGTATGGAGAAAGGACACTGTCTCTCAAGTATGGAAGGTTTAAAAGTCTCGAGAGCTCAACTGGAGATCACTACAAGAAACGGTTTCCGGAATTAAACGATTCGGATCATGGCTATTCTAAGGTAGTTTTGGATGCTCTATGTTCAATGCTAAATGTCCACAATGTCTTTGCAGCGCGTAACCCATTTGTTAATGGTCCAGAATCTAATTCCCCAGTTGTTATTGCTCGAGACACGGTACAGGGAACCAAAAAAATGCTCAAGGTGGTGGAGCTTGAGC TTGCAATCATGTACGATGACCTCTACACAAAGGCTCTTGTGCTGAGAACAAGGATAGGCATGATTCTCCGATGCACCTCTCACGCATGTTCCCTCCTTGCTTTTGCACTGTTCCTTACATGTGACAAACGGAGGTACAACGGAGTTGATGTTGCGATCACCTATTCGCTGTTTATCGGAGGCTTTTTCCTTGATCTTTCTGCAGTGTTTATCTTCATAATGTCTCCATGGACTTGGGCGTGGTTGAAGGCTCAGAAATGCGACCGGCTGGCTAGCTTGTCCTGGTTCCTTTTTTCCAGTGATATTGGCTGGCCAGAGAAAAGGCCACGGTGGTCGAATTCCATCGGACAGTACAAGTTGCTGAACTGGGTTTCTGGTGGAGACCAGCCAAGATCATACAACCAGAAAGTGGTGGCTCTAGTGAGAAGATTGTCGGGTTTAGTCGGTGTTGGAAAAGAAGATTTGTTCTGGCTGAGCAAGACGTTGGACACTGAGCATGTGGAGGCCGATGAAAAGACGATGGAGTTTGTCGTAAAGGGGATTAGTAGCTTGAGCGATGAAGTCTCCGAGCAACAACAATGGCAGCATCTTGGCCCATTGCTGAAAAAGATACGGGTCTGTTTTGTCGCAGATATGGGATGTGCTATTGTGGTGATGCACATATTCACTCAAGTATATTTGAATGCAGTAGAAGCCGCGGCAGCGGGAGACGAAGGAGGGGGAGATGCAGATGATATGGTGGAGGTGTGCCGAAAACTGTCCAACTACATGATGTACCTCTTTGTCAACCACCCTTCCATGCTTCCGCTCAATGCCAGCTCCGAAGCCACCGTGGTTGAGTTTGCGAAATCGAGAGAGGAACTGTCTAGGACACAACAAGGAAGCAAGATGACCCTGGATGAGCTATACAACATTATACAGCAGAATAAGGATGGTGTGTCAA GGCAAGGAACAATGGAGGAAATGTACAA GATGATACTAGAAGAGGATGTCCAACCAAGCTGGGGTGCAGTGGAGGAGATGGCAGCAATGTGGCTGCGGTTCCTCATCTTCGCCGCCGGCAGGTCCAATGGTAAGGTGCACGCGGCGGAGCTGGCCAGCGGAGGGGAGCTCATCACCTTCGCCTGGCTGCTCATGGCCCGGGAAGGGCTCGGCGAATCCGAGAGGAGAAGGGTCCGGCTGACGTCCACCATATCGTCCATTTCGTCTGCTGATTCTGCTGGTGCTGCAGCTGATTTGAAGGAAGCATATGCGTTCTTTTTCAACTGATTAAAGTTTGAAAGTTTGATTAGTACTTTAGCTGATTTGAGTAGCTTTGTTTGTTGTTCCCTACATCTTTATAATCTAAAGCTATGTATGAAGTAGAGTTAGGATTAATAACCAGCAATCTTCCTGTGATAAGAGATAATGCATGGCTGATATGATTTGGGCTTTCTATAGCTGCCAGCCCCTATATATATCCC AGATTTTCTCCTTCCTTTTCTCTTGACTGTAACCGTATCTGTGTAATACTTCGCCATATATACAGTTGTAAGAAGTTGAACAAGATTGT]
[+] EMBL CB671985             [                                      GGCTGATCCGTCGTCCGGTGGCTGGGGTTCCTGGCGGGAGACGCCGGTCGTGCAGAGGTGCTCTTAAATTTATAATAATGAAGGATTTTATGAAACTTTATCATCAGCGGGAAATCCAGCTGCTTGTGCTCCTCAGCTTCACACTCCAAATGTTCCTCTTTTTCACCGGCAGTCTTCGGAGGCGCAACACCAATGTGTTCCTCAGGGTTTCTATCTGGACAGCTTATTTGGGAGCAGACTTCACAGCAGTTTATGCTCTTGGTTACCTCTCACGACACGATGATATTCAGAGGCAAATGTCAGGGGGAACCCAGCCACTAGCTTTCTTTTGGGCATCATTCCTCCTCATCCATCTTGGTGGGCAGGACAGCATCACCGCATTTTCAATGGCAGACAACAACTTGTGGCTGAGGCATCTCTTGAACTTGGTGGTGCAAGTAGTCCTAGCTGCATATGTTTTCTGGAAATCGCCAGCAAGGCACAGTGCAGAGCTTCTAGTTTCAGGTGTCCTTGTGTTCATTGCCGGAGTTACCAAGTATGGAGAAAGGACACTGTCTCTCAAGTATGGAAGGTTTAAAAGTCTCGAGAGCTCAACTGGAGATCACTACAAGAAACGGTTTCCGGAATTAAACGATTCGGATCATGGCTATTCTAAGGTAGTTTTGGATGCTCTATGTTCAATGCTAAATGTCCACAATGTCTTTGCAGCGCGTAACCCATTTGTTAATGGTCCAGAATCTAATTCCCCAGTTGTTATTGCTCGAGACACGGTACAGGGAACCAAAAAAATGCTCAAGGTGGTGGAGCTTGAGCTTTGC ATCATGTACGATG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CB647959             [                                                                                                                                                                     GCTCCTCACCTTCACACTCCAAATGTTCCTCTTTTTCACCGGCAGTCTTCGGAGGCGCAACACCAATGTGTTCCTCAGGGTTTCTATCTGGACAGCTTATTTGGGAGCAGACTTCACAGCAGTTTATGCTCTTGGTTACCTCTCACGACACGATGATATTCAGAGGCAAATGTCAGGGGGAACCCAGCCACTAGCTTTCTTTTGGGCATCATTCCTCCTCATCCATCTTGGTGGGCAGGACAGCATCACCGCATTTTCAATGGCAGACAACAACTTGTGGCTGAGGCATCTCTTGAACTTGGTGGTGCAAGTAGTCCTAGCTGCATATGTTTTCTGGAAATCGCCAGCAAGGCACAGTGCAGAGCTTCTAGTTTCAGGTGTCCTTGTGTTCATTGCCGGAGTTACCAAGTATGGAGAAAGGACACTGTCTCTCAAGTATGGAAGGTTTAAAAGTCTCGAGAGCTCAACTGGAGATCACTACAAGAAACGGTTTCCGGAATTAAACGATTCGGATCATGGCTATTCTAAGGTAGTTTTGGATGCTCTATGTTCAATGCTAAATGTCCACAATGTCTTTGCAGCGCGTAACCCATTTGTTAATGGTCCAGAATCTAATTCCCCAGTTGTTATTGCTCGAGACACGGTACAGGGAACCAAAAAAATGCTCAAGGTGGTGGAGCTTGAGC TTGCAATCATGTACGATGACCTCTACACAAAGGCTCTTGTGCTGAGAAC AGGATAGGCATGATTCTCCGATGCACCTCTCACGCATGTTCCCTCCTTGCTTTTGCACTGTTCCTTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[-] EMBL CB671986             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ATGTGCTATTGTGGTGATGCACATATTCACTCAAGTATATTTGAATGCAGTAGAAGCCGCGGCAGCGGGAGACGAAGGAGGGGGAGATGCAGATGATATGGTGGAGGTGTGCCGAAAACTGTCCAACTACATGATGTACCTCTTTGTCAACCACCCTTCCATGCTTCCGCTCAATGCCAGCTCCGAAGCCACCGTGGTTGAGTTTGCGAAATCGAGAGAGGAACTGTCTAGGACACAACAAGGAAGCAAGATGACCCTGGATGAGCTATACAACATTATACAGCAGAATAAGGATGGTGTGTCAA GGCAAGGAACAATGGAGGAAATGTACAA GATGATACTAGAAGAGGATGTCCAACCAAGCTGGGGTGCAGTGGAGGAGATGGCAGCAATGTGGCTGCGGTTCCTCATCTTCGCCGCCGGCAGGTCCAATGGTAAGGTGCACGCGGCGGAGCTGGCCAGCGGAGGGGAGCTCATCACCTTCGCCTGGCTGCTCATGGCCCGGGAAGGGCTCGGCGAATCCGAGAGGAGAAGGGTCCGGCTGACGTCCACCATATCGTCCATTTCGTCTGCTGATTCTGCTGGTGCTGCAGCTGATTTGAAGGAAGCATATGCGTTCTTTTTCAACTGATTAAAGTTTGAAAGTTTGATTAGTACTTTAGCTGATTTGAGTAGCTTTGTTTGTTGTTCCCTACATCTTTATAATCTAAAGCTATGTATGAAGTAGAGTTAGGATTAATAACCAGCAATCTTCCTGTGATAAGAGATAATGCATGGCTGATATGATTTGG                                                                                                                            ]
[-] EMBL CB647960             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        GGTGGGTCAAGGGCAAGGAACAATGGAGGAAATGTACAAGGATGATACTAGAAGAGGATGTCCAACCAAGCTGGGGTGCAGTGGAGGAGATGGCAGCAATGTGGCTGCGGTTCCTCATCTTCGCCGCCGGCAGGTCCAATGGTAAGGTGCACGCGGCGGAGCTGGCCAGCGGAGGGGAGCTCATCACCTTCGCCTGGCTGCTCATGGCCCGGGAAGGGCTCGGCGAATCCGAGAGGAGAAGGGTCCGGCTGACGTCCACCATATCGTCCATTTCGTCTGCTGATTCTGCTGGTGCTGCAGCTGATTTGAAGGAAGCATATGCGTTCTTTTTCAACTGATTAAAGTTTGAAAGTTTGATTAGTACTTTAGCTGATTTGAGTAGCTTTGTTTGTTGTTCCCTACATCTTTATAATCTAAAGCTATGTATGAAGTAGAGTTAGGATTAATAACCAGCAATCTTCCTGTGATAAGAGATAATGCATGGCTGATATGATTTGGGCTTTCTATAGCTGCCAGCCCCTATATATATCCCGAGATTTTCTCCTTCCTTTTCTCTTGACTGTAACCGTATCTGTG                                              ]




>consensus_8343#0
TCCACTCGATCTGCTACCTCCTGGACACGGCGACGTACGGCTGATCCGTCGTCCGGTGGC
TGGGGTTCCTGGCGGGAGACGCCGGTCGTGCAGAGGTGCTCTTAAATTTATAATAATGAA
GGATTTTATGAAACTTTATCATCAGCGGGAAATCCAGCTGCTTGTGCTCCTCAGCTTCAC
ACTCCAAATGTTCCTCTTTTTCACCGGCAGTCTTCGGAGGCGCAACACCAATGTGTTCCT
CAGGGTTTCTATCTGGACAGCTTATTTGGGAGCAGACTTCACAGCAGTTTATGCTCTTGG
TTACCTCTCACGACACGATGATATTCAGAGGCAAATGTCAGGGGGAACCCAGCCACTAGC
TTTCTTTTGGGCATCATTCCTCCTCATCCATCTTGGTGGGCAGGACAGCATCACCGCATT
TTCAATGGCAGACAACAACTTGTGGCTGAGGCATCTCTTGAACTTGGTGGTGCAAGTAGT
CCTAGCTGCATATGTTTTCTGGAAATCGCCAGCAAGGCACAGTGCAGAGCTTCTAGTTTC
AGGTGTCCTTGTGTTCATTGCCGGAGTTACCAAGTATGGAGAAAGGACACTGTCTCTCAA
GTATGGAAGGTTTAAAAGTCTCGAGAGCTCAACTGGAGATCACTACAAGAAACGGTTTCC
GGAATTAAACGATTCGGATCATGGCTATTCTAAGGTAGTTTTGGATGCTCTATGTTCAAT
GCTAAATGTCCACAATGTCTTTGCAGCGCGTAACCCATTTGTTAATGGTCCAGAATCTAA
TTCCCCAGTTGTTATTGCTCGAGACACGGTACAGGGAACCAAAAAAATGCTCAAGGTGGT
GGAGCTTGAGCTTGCAATCATGTACGATGACCTCTACACAAAGGCTCTTGTGCTGAGAAC
AAGGATAGGCATGATTCTCCGATGCACCTCTCACGCATGTTCCCTCCTTGCTTTTGCACT
GTTCCTTACATGTGACAAACGGAGGTACAACGGAGTTGATGTTGCGATCACCTATTCGCT
GTTTATCGGAGGCTTTTTCCTTGATCTTTCTGCAGTGTTTATCTTCATAATGTCTCCATG
GACTTGGGCGTGGTTGAAGGCTCAGAAATGCGACCGGCTGGCTAGCTTGTCCTGGTTCCT
TTTTTCCAGTGATATTGGCTGGCCAGAGAAAAGGCCACGGTGGTCGAATTCCATCGGACA
GTACAAGTTGCTGAACTGGGTTTCTGGTGGAGACCAGCCAAGATCATACAACCAGAAAGT
GGTGGCTCTAGTGAGAAGATTGTCGGGTTTAGTCGGTGTTGGAAAAGAAGATTTGTTCTG
GCTGAGCAAGACGTTGGACACTGAGCATGTGGAGGCCGATGAAAAGACGATGGAGTTTGT
CGTAAAGGGGATTAGTAGCTTGAGCGATGAAGTCTCCGAGCAACAACAATGGCAGCATCT
TGGCCCATTGCTGAAAAAGATACGGGTCTGTTTTGTCGCAGATATGGGATGTGCTATTGT
GGTGATGCACATATTCACTCAAGTATATTTGAATGCAGTAGAAGCCGCGGCAGCGGGAGA
CGAAGGAGGGGGAGATGCAGATGATATGGTGGAGGTGTGCCGAAAACTGTCCAACTACAT
GATGTACCTCTTTGTCAACCACCCTTCCATGCTTCCGCTCAATGCCAGCTCCGAAGCCAC
CGTGGTTGAGTTTGCGAAATCGAGAGAGGAACTGTCTAGGACACAACAAGGAAGCAAGAT
GACCCTGGATGAGCTATACAACATTATACAGCAGAATAAGGATGGTGTGTCAAGGCAAGG
AACAATGGAGGAAATGTACAAGATGATACTAGAAGAGGATGTCCAACCAAGCTGGGGTGC
AGTGGAGGAGATGGCAGCAATGTGGCTGCGGTTCCTCATCTTCGCCGCCGGCAGGTCCAA
TGGTAAGGTGCACGCGGCGGAGCTGGCCAGCGGAGGGGAGCTCATCACCTTCGCCTGGCT
GCTCATGGCCCGGGAAGGGCTCGGCGAATCCGAGAGGAGAAGGGTCCGGCTGACGTCCAC
CATATCGTCCATTTCGTCTGCTGATTCTGCTGGTGCTGCAGCTGATTTGAAGGAAGCATA
TGCGTTCTTTTTCAACTGATTAAAGTTTGAAAGTTTGATTAGTACTTTAGCTGATTTGAG
TAGCTTTGTTTGTTGTTCCCTACATCTTTATAATCTAAAGCTATGTATGAAGTAGAGTTA
GGATTAATAACCAGCAATCTTCCTGTGATAAGAGATAATGCATGGCTGATATGATTTGGG
CTTTCTATAGCTGCCAGCCCCTATATATATCCCAGATTTTCTCCTTCCTTTTCTCTTGAC
TGTAACCGTATCTGTGTAATACTTCGCCATATATACAGTTGTAAGAAGTTGAACAAGATT
GT
clustalw multiple alignements is not computed in this case