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Oryza sativa
cluster # 8376 cluster # 8376       Sequences # 5       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8376#0 length = 1235 sequences # 5  
consensusID : consensus_8376#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1235
fasta sequence 
                              [CCGCCGTCGCCGCCGCCTCCACCTCCCGTACCCTCGTCCTCGCCCGCCACCGCTCGCCGCCGGCGTCTAGGGTCGCGGCGACAAGCCGCGGGCGTCCGTTCTCCTCCGGCCCCCATCCCCTCGCCGTCTCTCCCGCCACCCGCGCCCCCGCCATGGCCACCGACGGCGCCGCCGCCGCCGCCGCGGCAGGGTCGAAGAAGAAGAAGGAGGTGCTCATCTTCGACGCCGAGGAGGACCTCGCGGTGTCCCTGGCGAAGTACACGGCGGAGCTGTCCGCGAAGCTCGCCGCCGAGAGGGGCGCCTTCACCGTCGTGCTCTCCGGCGGATCCCTCATCAAGAACATCAGGAAGCTCGCGGAGCCACCGTACCTGGATTCGGTGGATTGGAGCAAGTGGCATGTGTTCTGGGTGGACGAGAGGGTGGTGCCCAAGGACCATGAGGATAGCAACTACAAGCTCGCCTTGGATGGGTTTCTCTCCAAGGTCCCAATTCCTACTGGCCAAGTTTATGCTATAAATGATGCCTTGTCAGCTGAGGGAGCAGCGGATGACTATGAAACTTGCTTGAAGCAACTTGTCAAGAATGGTGTGATTGCAATGTCGCAATCGACTGGGTTTCCTAGGTTTGATGTCATGCTCCTGGGAATGGGCCCTGATGGCCATATTGCATCTCTTTTCCCAGGCCACCCTCTTGTTAATGAAAACAAGAAGTGGGTCACCTACATCAAGGATTCTCCAAAGCCACCACCTGAGAGAATTACGTTTACATTTCCTGTGATCAACTCATCTGCGTATGTCGCAATGGTGGTCACTGGAGCTGGGAAAGCTGGTGCAGTGCAGAAAGCACTTTCAGATAAGCAGACTTCGTCTGATTTGCTGCCTGTAGAAATGGCTGTACTTCAAGATGGGGAATTCACTTGGTTCACTGACAAGCCAGCAGTGTCAATGTTACAGAACAAATGAGGTCCATGCCTGGATATTGTTTAAGCTTTCATCTTAAATAAAGATCCAGGGGCTAATCCCAGCCTGGATACTGTTTAAGCTTTCAATCCAAAGCTGGGTTGTAATGATCTTCAGTCTAAAAAAGGATCCAGGTGACTGCATAGTTGCATTCCTCTTTTATGCATCACTTGTAAGGAAAACATGAGCATGTATGTTGTATGTTGTTCAGAGTGATGTATCTGAGACACTCCTGGTTTCGGCTTAGTAAATAACCTTTCCTGGCCAAAAAAAAAA]

[+] EMBL AK069696             [CCGCCGTCGCCGCCGCCTCCACCTCCCGTACCCTCGTCCTCGCCCGCCACCGCTCGCCGCCGGCGTCTAGGGTCGCGGCGACAAGCCGCGGGCGTCCGTTCTCCTCCGGCCCCCATCCCCTCGCCGTCTCTCCCGCCACCCGCGCCCCCGCCATGGCCACCGACGGCGCCGCCGCCGCCGCCGCGGCAGGGTCGAAGAAGAAGAAGGAGGTGCTCATCTTCGACGCCGAGGAGGACCTCGCGGTGTCCCTGGCGAAGTACACGGCGGAGCTGTCCGCGAAGCTCGCCGCCGAGAGGGGCGCCTTCACCGTCGTGCTCTCCGGCGGATCCCTCATCAAGAACATCAGGAAGCTCGCGGAGCCACCGTACCTGGATTCGGTGGATTGGAGCAAGTGGCATGTGTTCTGGGTGGACGAGAGGGTGGTGCCCAAGGACCATGAGGATAGCAACTACAAGCTCGCCTTGGATGGGTTTCTCTCCAAGGTCCCAATTCCTACTGGCCAAGTTTATGCTATAAATGATGCCTTGTCAGCTGAGGGAGCAGCGGATGACTATGAAACTTGCTTGAAGCAACTTGTCAAGAATGGTGTGATTGCAATGTCGCAATCGACTGGGTTTCCTAGGTTTGATGTCATGCTCCTGGGAATGGGCCCTGATGGCCATATTGCATCTCTTTTCCCAGGCCACCCTCTTGTTAATGAAAACAAGAAGTGGGTCACCTACATCAAGGATTCTCCAAAGCCACCACCTGAGAGAATTACGTTTACATTTCCTGTGATCAACTCATCTGCGTATGTCGCAATGGTGGTCACTGGAGCTGGGAAAGCTGGTGCAGTGCAGAAAGCACTTTCAGATAAGCAGACTTCGTCTGATTTGCTGCCTGTAGAAATGGCTGTACTTCAAGATGGGGAATTCACTTGGTTCACTGACAAGCCAGCAGTGTCAATGTTACAGAACAAATGAGGTCCATGCCTGGATATTGTTTAAGCTTTCATCTTAAATAAAGATCCAGGGGCTAATCCCAGCCTGGATACTGCTTAAGCTTTCAATCCAAAGCTGGGTTGTAATGATCTTCTGTCTAAAAAAGGATCCAGGTGACTGCATAGTTGCATTCCTCTTTTATGCATCACTTGTAAGGAAAACATGAGCATGTATGTTGTATGTTGTTCAGAGTGATGTATCTGAGACACTCCTGGTTTCGACTTAGTAAATAACC                    ]
[+] EMBL CA748459             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           CTTGTCAGCTGAGGGAGCAGCGGATGACTATGAAACTTGCTTGAAGCAACTTGTCAAGAATGGTGTGATTGCAATGTCGCAATCGACTGGGTTTCCTAGGTTTGATGTCATGTTCCTGGGAATGGGCCCTGATGGCCATATTGCATCTCTTTTCCCAGGCCACCCTCTTGTTAATGAAAACAAGAAGTGGGTCACCTACATCAAGGATTCTCCAAAGCCACCACCTGAGAGAGTTACGTTTACATTTCCTGTGATCAACTCATCTGCGTATGTCGCAATGGTGGTCACTGGAGCTGGGAAAGCTGGTGCAGTGCAGAAAGCACTTTCAGATAAGCAGACTTCGTCTGATTTGCTGCCTGTAG                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CA753720             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          AACTTGTCAAGAATGGTGTGATTGCAATGTCGCAATCGACTGGGTTTCCTAGGTTTGATGTCATGCTCCTGGGAATGGGCCCTGATGGCCATATTGCATCTCTTTTCCCAGGCCACCCTCTTGTTAATGAAAACAAGAAGTGGGTCACCTACATCAAGGATTCTCCAAAGCCACCACCTGAGAGAATNACGTNTACATTTCCTGTGATCAACTCATCTGCGTATGTCGCAATGGTGGTCACTGGAGCTGGGAAAGCTGGTGCAGTGCAGAAAGCACTTTCAGATAAGCAGACTTCGTCTGATTTGCTGCCTGTAGAAATGGCTGTACTTCAAGATGGGGAATNCACTTGGTTCACTGACAAGCCAGCAGTGTCAATGTTACAGAACAAATGAGGTCCATGCCTGGATATTGTTTAAGCTTTCATCTTAAATAAAGATCCAGGGGCCAATCCCAGCCTGGATACT                                                                                                                                                                                                         ]
[+] EMBL BI813764             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  cTGTTAATGAAAAC AGAAGTGGGTCA CTACATCAAGGATTCTCCAAAGCCACCACCTGAGAGAATTACGTTTACATTTCCTGTGATCAACTCATCTGCGTATGTCGCAATGGTGGTCACCCGAGCTGGGAAAGCTGGTGCAGTGCAGAAAGCACTTTCAGATAAGCAGACTTCGTCTGATTTGCTGCCTGTAGAAATGGCTGTACTTCAAGATGGGGAATTCACTTGGTTCACTGACAAGCCAGCAGTGTCAATGTTACAGAACAAATGAGGTCCATGCCTGGATATTGTTTAAGCTTTCATCTTAAATAAAGATCCAGGGGCTAATCCCAGCCTGGATACTGTTTAAGCTTTCAATCCCAAGCTGGGTTGTAATGATCTTCAGTCTAAAAAAGGATCCAGGTGACTGCATAGTTGCATTCCTCTTTTATGCATCACTTGTAAGGAAAACATGAGCATGTATGTTGTATGTTGTTCAGAGTGATGTATCTGAGACACTCCTGGTTTCGGCTTAGTAAATAACCTTTCCTGGCCAAAAAAAAAA]
[+] EMBL CA764164             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               TACATCAAGGATTCTCCAAAGCCACCACCTGAGAGAATTACGTTTACATTTCCTGTGATCAACTCATCTGCGTATGTCGCAATGGTGGTCACTGGAGCTGGGAAAGCTGGTGCAGTGCAGAAAGCACTTTCAGATAAGCAGACTTCGTCTGATTTGCTGCCTGTAGAAATGGCTGTACTTCAAGATGGGGAATTCACTTGGTTCACTGACAAGCCAGCAGTGTCAATGTTACAGAACAAATGAGGTCCATGCCTGGATATTGTTTAAGCTTTCATCTTAAATAAAGATCCAGGGGCTAATCCCAGCCTGGATACTGTTTAAGCTTTCAATCCAAAGCTGGGTTGTAATGATCTTCAGTCTAAAAAAGGATCCAGGTGACTGCATAGTTGCATTCCTCTTTTATGCATCACTTGTAAGGAAAACATGAGCATGTATGTTGTATGTTGTTCAGAGTGATGTATCTGAGACACTCCTGGTTTCGGCTTAGTAAATAACCTTTCCTGGCCc         ]




>consensus_8376#0
CCGCCGTCGCCGCCGCCTCCACCTCCCGTACCCTCGTCCTCGCCCGCCACCGCTCGCCGC
CGGCGTCTAGGGTCGCGGCGACAAGCCGCGGGCGTCCGTTCTCCTCCGGCCCCCATCCCC
TCGCCGTCTCTCCCGCCACCCGCGCCCCCGCCATGGCCACCGACGGCGCCGCCGCCGCCG
CCGCGGCAGGGTCGAAGAAGAAGAAGGAGGTGCTCATCTTCGACGCCGAGGAGGACCTCG
CGGTGTCCCTGGCGAAGTACACGGCGGAGCTGTCCGCGAAGCTCGCCGCCGAGAGGGGCG
CCTTCACCGTCGTGCTCTCCGGCGGATCCCTCATCAAGAACATCAGGAAGCTCGCGGAGC
CACCGTACCTGGATTCGGTGGATTGGAGCAAGTGGCATGTGTTCTGGGTGGACGAGAGGG
TGGTGCCCAAGGACCATGAGGATAGCAACTACAAGCTCGCCTTGGATGGGTTTCTCTCCA
AGGTCCCAATTCCTACTGGCCAAGTTTATGCTATAAATGATGCCTTGTCAGCTGAGGGAG
CAGCGGATGACTATGAAACTTGCTTGAAGCAACTTGTCAAGAATGGTGTGATTGCAATGT
CGCAATCGACTGGGTTTCCTAGGTTTGATGTCATGCTCCTGGGAATGGGCCCTGATGGCC
ATATTGCATCTCTTTTCCCAGGCCACCCTCTTGTTAATGAAAACAAGAAGTGGGTCACCT
ACATCAAGGATTCTCCAAAGCCACCACCTGAGAGAATTACGTTTACATTTCCTGTGATCA
ACTCATCTGCGTATGTCGCAATGGTGGTCACTGGAGCTGGGAAAGCTGGTGCAGTGCAGA
AAGCACTTTCAGATAAGCAGACTTCGTCTGATTTGCTGCCTGTAGAAATGGCTGTACTTC
AAGATGGGGAATTCACTTGGTTCACTGACAAGCCAGCAGTGTCAATGTTACAGAACAAAT
GAGGTCCATGCCTGGATATTGTTTAAGCTTTCATCTTAAATAAAGATCCAGGGGCTAATC
CCAGCCTGGATACTGTTTAAGCTTTCAATCCAAAGCTGGGTTGTAATGATCTTCAGTCTA
AAAAAGGATCCAGGTGACTGCATAGTTGCATTCCTCTTTTATGCATCACTTGTAAGGAAA
ACATGAGCATGTATGTTGTATGTTGTTCAGAGTGATGTATCTGAGACACTCCTGGTTTCG
GCTTAGTAAATAACCTTTCCTGGCCAAAAAAAAAA

clustalw multiple alignements is not computed in this case
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)