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Oryza sativa
cluster # 8382 cluster # 8382       Sequences # 5       consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8382#0 length = 2977 sequences # 4  
 consensus_8382#1 length = 675 sequences # 1  
consensusID : consensus_8382#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 2977
fasta sequence 
                              [TTCACCTGCCCCATTGTGAATAGTCCCGTCGTCCCCTTCCTCCTCTTCCTCCTCCCTCTCTCCTTTTTCTTCTTCTTCTTCTTTCGAGGAGAGGAAGGAGGCGGCCGCGCGCGCGCGGAGGCGGGCAACCTCTCCTCGACTCCTCTCCCCCACCGTTTCGTCGTCCCCGCGTGGGAGGAAGGGGAGGAGGCGGAGATGGCGGGGGAGGAGCGGCCGGAGCGGATCGTGGTGTCGGTGCGGCTGCGGCCGGTGAACGCGCGCGAGGCGGAGCGCGGCGACGGCTCCGACTGGGAGTGCGCCGGCCCGACCACGCTCACGTTCCGCGGCGCCGTCCCCGAGCGCGCCATGTTCCCCGCCTCCTACAGCTACGACAGGGTGTTCAGCCATGAGTGCGGCACGAGGCAGGTGTACGACGAAGGCGCCAGGCAGGTCGCCATGTCAGTGCTCAGTGGAATCAACGCGAGCATATTCGCGTACGGGCAGACGAGCAGCGGCAAGACCTACACCATGGTTGGCATCACGGAGTACAGCATGTCGGACATCTACGACTACATCGAGAAGCATCCTGAGAGAGAGTTCATCCTGAAGTTCTCGGCAATGGAGATATACAACGAGGCTGTCAGGGACCTCCTGAGCTCTGACGCAACGCCTCTCAGGCTTCTTGATGATCCAGAGAAAGGAACAGTTGTAGAAAAACTCACCGAGGAGACTCTGCGAGACAAAGGCCATCTTCTGGAGCTCCTTGCTGTGTGTGAAGCTCAAAGACAGATTGGGGAAACTGCTATGAATGAAGCAAGCTCCAGATCTCATCAAATACTCAGGATGACGGTTGAGAGTTCAGCTAAGCAGTTCTTGGGGAAAGGAAACTCGAGCACTCTTATTGCTTGTGTGAATTTTGTTGATTTAGCAGGAAGTGAGCGTGCATCTCAGACGGCATCGGCTGGTATGAGGCTAAAGGAGGGCAGCCATATTAACAGAAGCCTGCTTACTCTAGGAAAGGTCATTCGCCAACTCAGCAAGGGGAGAAATGGCCATATCCCATACAGAGATTCAAAGCTCACCCGGATACTGCAGTCATCACTGGGAGGCAATGCAAGAACAGCAATCATCTGCACGATGAGCCCGGCACACTGCCACATCGAGCAGTCGAGGAACACTCTTCTGTTTGCTAACTGCGCGAAAGATGTCGTCACCAATGCACAGGTCAACGTGGTTATGTCAGACAAGGCACTGGTGAAGCATCTTCAGAGAGAGATCGCTAGGTTGGAGAACGAGCTGAAGTTTCCTGCATCAGCCTCTTGCACTTCTCATGCAGAGATTCTCAGAGAAAAGGATGAACTAATTAAGAATCTGGAAGAACAGTTGAAGGAACTGATGGAGCAAAAGGACACCGTTCAATCTCAGCTTGATAATTTCCGCAAAGTTGCGAGCGACGGGGATATCAACAATCACTTAGCAAGGCGATGGAGTCGGTCTTCAGACTCGATTCCGCGCATTGTGTCAGAAGGTGCATTTTCATCTTCAGATACTCAAGACATTGACTATCAAGATCAAACAATGGATGAACTGTCAGTACCTCACTCGTTTCCACCAAGCAGCCAAATTTCTGACATCACAGAGGAACACGAAGCACAGAGAGTAGCTCATCGAGCTGAATCTGAGCCCCCTGAGGAGCACTGCAAGGAAGTGCAGTGCATCGAGACAAACAAGCTCAGGAGCAGGAGAAGCCAAGAATTCTTCCAAACACCTGAAAAGAAGACACACACTGATGATCAAAAGCATAGCGAAAGCATGTCAAATTCAGCAGAAAATGCCATCAAGCTATATGCGTGTGATTTTGAGCCGTCATTTGATCTCGAGAAGCCTGAAACTGAAGAATCTCTTGCCCTGAAGAGGTGTGTGGTTAGCTCCAGGGACAGTGCGCTTACTAGGAGTAGAAGCTGCAGAGCTAGCTTCATGGTCATTCCGAACAGCTGGTTCGATGACTCGGCGAGCACGACGCCGTCGTCCGAAACCTTCAGATATTCTACCAGAAGGCCAGAGAAGGTGAGGAAAAGCCTGAGTCCTGATGAGATCGCAGACAAGAGCACGGGCAACGCTGAAGAAGACAAGAGCACCTGCAATGCTGAAGAAGAGACTGCTGTGAATGACATCGGCTGCGTCACAGAAGTGAAGCAGAAGACAGAAATGAACCATGCACCCCAATCTTCAGAGCAACACCAGCCGAAAATTGCTAAAGAAGTTGCCACGGTCTCCCTTTCGAAATGGCACATCGATTTCGAGAGAAAGCAGCAGGAGATCATCGAGCTGTGGCATGACTGCAACGTCTCGATCGTACACCGGACCTACTTCTTCCTCCTCTTCAAGGGCGATCAGACGGACAGCATCTACATGGAGGTAGAGCACAGGCGACTCTCCTTCATCAAGAACTCCCTCATCGCAGACGGCGAGCTCCACGCTACCACCGCATCAAGCTTGAGGAATCTTCGGCATGAGAGGGACATGCTGTACAGGCAGATGGTGAGGAAGCTGCACCTGGCCGAGAAGGAGAGGCTGTACGGCAAGTGGGGGATCGACATGAGCACCAAGCAGAGGAGGCTGCAGCTGTCGCGGCGGATCTGGACGCAGACCGGGATGGATCACGTCAGGGAGAGCGCCGCCCTCGTCGCGAAGCTGGTCGAGCACCTGGAGAAGGGGCAGGCCATCA-GGGAGATGTTCGGGCTGAGCTTCAGTTTCAAGCCACGCAGATCTTTCAGCTGGGTCGGCGTCTACTCCCGAGACTGAATTCTTGCCCGGCCATGGCGATGAACTGATGATGATGTCTCAGTGGTAGATGGATGCGTAGTGGAGGAGACGATGCTGCATGTCAGGAAGGAGAGGAGAGAGATTTTGCCGCCGGAATTGAACTGATGGATTGCCCCGTTCTATCTATGCATGTGAATTGTGATTCAGATTTTTTGCTTCTGGCGTGAGTTCC]

[+] EMBL AK100918             [TTCACCTGCCCCATTGTGAATAGTCCCGTCGTCCCCTTCCTCCTCTTCCTCCTCCCTCTCTCCTTTTTCTTCTTCTTCTTCTTTCGAGGAGAGGAAGGAGGCGGCCGCGCGCGCGCGGAGGCGGGCAACCTCTCCTCGACTCCTCTCCCCCACCGTTTCGTCGTCCCCGCGTGGGAGGAAGGGGAGGAGGCGGAGATGGCGGGGGAGGAGCGGCCGGAGCGGATCGTGGTGTCGGTGCGGCTGCGGCCGGTGAACGCGCGCGAGGCGGAGCGCGGCGACGGCTCCGACTGGGAGTGCGCCGGCCCGACCACGCTCACGTTCCGCGGCGCCGTCCCCGAGCGCGCCATGTTCCCCGCCTCCTACAGCTACGACAGGGTGTTCAGCCATGAGTGCGGCACGAGGCAGGTGTACGACGAAGGCGCCAGGCAGGTCGCCATGTCAGTGCTCAGTGGAATCAACGCGAGCATATTCGCGTACGGGCAGACGAGCAGCGGCAAGACCTACACCATGGTTGGCATCACGGAGTACAGCATGTCGGACATCTACGACTACATCGAGAAGCATCCTGAGAGAGAGTTCATCCTGAAGTTCTCGGCAATGGAGATATACAACGAGGCTGTCAGGGACCTCCTGAGCTCTGACGCAACGCCTCTCAGGCTTCTTGATGATCCAGAGAAAGGAACAGTTGTAGAAAAACTCACCGAGGAGACTCTGCGAGACAAAGGCCATCTTCTGGAGCTCCTTGCTGTGTGTGAAGCTCAAAGACAGATTGGGGAAACTGCTATGAATGAAGCAAGCTCCAGATCTCATCAAATACTCAGGATGACGGTTGAGAGTTCAGCTAAGCAGTTCTTGGGGAAAGGAAACTCGAGCACTCTTATTGCTTGTGTGAATTTTGTTGATTTAGCAGGAAGTGAGCGTGCATCTCAGACGGCATCGGCTGGTATGAGGCTAAAGGAGGGCAGCCATATTAACAGAAGCCTGCTTACTCTAGGAAAGGTCATTCGCCAACTCAGCAAGGGGAGAAATGGCCATATCCCATACAGAGATTCAAAGCTCACCCGGATACTGCAGTCATCACTGGGAGGCAATGCAAGAACAGCAATCATCTGCACGATGAGCCCGGCACACTGCCACATCGAGCAGTCGAGGAACACTCTTCTGTTTGCTAACTGCGCGAAAGATGTCGTCACCAATGCACAGGTCAACGTGGTTATGTCAGACAAGGCACTGGTGAAGCATCTTCAGAGAGAGATCGCTAGGTTGGAGAACGAGCTGAAGTTTCCTGCATCAGCCTCTTGCACTTCTCATGCAGAGATTCTCAGAGAAAAGGATGAACTAATTAAGAATCTGGAAGAACAGTTGAAGGAACTGATGGAGCAAAAGGACACCGTTCAATCTCAGCTTGATAATTTCCGCAAAGTTGCGAGCGACGGGGATATCAACAATCACTTAGCAAGGCGATGGAGTCGGTCTTCAGACTCGATTCCGCGCATTGTGTCAGAAGGTGCATTTTCATCTTCAGATACTCAAGACATTGACTATCAAGATCAAACAATGGATGAACTGTCAGTACCTCACTCGTTTCCACCAAGCAGCCAAATTTCTGACATCACAGAGGAACACGAAGCACAGAGAGTAGCTCATCGAGCTGAATCTGAGCCCCCTGAGGAGCACTGCAAGGAAGTGCAGTGCATCGAGACAAACAAGCTCAGGAGCAGGAGAAGCCAAGAATTCTTCCAAACACCTGAAAAGAAGACACACACTGATGGTCAAAAGCATAGCGAAAGCATGTCAAATTCAGCAGAAAATGCCATCAAGCTATATGCGTGTGATTTTGAGCCGTCATTTGATCTCGAGAAGCCTGAAACTGAAGAATCTCTTGCCCTGAAGAGGTGTGTGGTTAGCTCCAGGGACAGTGCGCTTACTAGGAGTAGAAGCTGCAGAGCTAGCTTCATGGTCATTCCGAACAGCTGGTTCGATGACTCGGCGAGCACGACGCCGTCGTCCGAAACCTTCAGATATTCTACCAGAAGGCCAGAGAAGGTGAGGAAAAGCCTGAGTCCTGATGAGATCGCAGACAAGAGCACGGGCAACGCTGAAGAAGACAAGAGCACCTGCAATGCTGAAGAAGAGACTGCTGTGAATGACATCGGCTGCGTCACAGAAGTGAAGCAGAAGACAGAAATGAACCATGCACCCCAATCTTCAGAGCAACACCAGCCGAAAATTGCTAAAGAAGTTGCCACGGTCTCCCTTTCGAAATGGCACATCGATTTCGAGAGAAAGCAGCAGGAGATCATCGAGCTGTGGCATGACTGCAACGTCTCGATCGTACACCGGACCTACTTCTTCCTCCTCTTCAAGGGCGATCAGACGGACAGCATCTACATGGAGGTAGAGCACAGGCGACTCTCCTTCATCAAGAACTCCCTCATCGCAGACGGCGAGCTCCACGCTACCACCGCATCAAGCTTGAGGAATCTTCGGCATGAGAGGGACATGCTGTACAGGCAGATGGTGAGGAAGCTGCACCTGGCCGAGAAGGAGAGGCTGTACGGCAAGTGGGGGATCGACATGAGCACCAAGCAGAGGAGGCTGCAGCTGTCGCGGCGGATCTGGACGCAGACCGGGATGGATCACGTCAGGGAGAGCGCCGCCCTCGTCGCGAAGCTGGTCGAGCACCTGGAGAAGGGGCAGGCCATCA GGGAGATGTTCGGGCTGAGCTTCAGTTTCAAGCCACGCAGATCTTTCAGCTGGGTCGGCGTCTACTCCCGAGACTGAATTCTTGCCCGGCCATGGCGATGAACTGATGATGATGTCTCAGTGGTAGATGGATGCGTAGTGGAGGAGACGATGCTGCATGTCAGGAAGGAGAGGAGAGAGATTTTGCCGCCGGAATTGAACTGATGGATTGCCCCGTTCTATCTATGCATGTGA                                     ]
[+] EMBL AK072633             [                                                                                                       GCCGCGCGCGCGCGGAGGCGGGCAACCTCTCCTCGACTCCTCTCCCCCACCGTTTCGTCGTCCCCGCGTGAGAGGAAGGGGAGGAGGCGGAGATGGCGGGGGAGGAGCGGCCGGAGCGGATCGTGGTGTCGGTGCGGCTGCGGCCGGTGAACGCGCGCGAGGCGGAGCGCGGCGACGGCTCCGACTGGGAGTGCGCCGGCCCGACCACGCTCACGTTCCGCGGCGCCGTCCCCGAGCGCGCCATGTTCCCCGCCTCCTACAGCTACGACAGGGTGTTCAGCCATGAGTGCGGCACGAGGCAGGTGTACGACGAAGGCGCCAGGCAGGTCGCCATGTCAGTGCTCAGTGGAATCAACGCGAGCATATTCGCGTACGGGCAGACGAGCAGCGGCAAGACCTACACCATGGTTGGCATCACGGAGTACAGCATGTCGGACATCTACGACTACATCGAGAAGCATCCTGAGAGAGAGTTCATCCTGAAGTTCTCGGCAATGGAGATATACAACGAGGCTGTCAGGGACCTCCTGAGCTCTGACGCAACGCCTCTCAGGCTTCTTGATGATCCAGAGAAAGGAACAGTTGTAGAAAAACTCACCGAGGAGACTCTGCGAGACAAAGGCCATCTTCTGGAGCTCCTTGCTGTGTGTGAAGCTCAAAGACAGATTGGGGAAACTGCTATGAATGAAGCAAGCTCCAGATCTCATCAAATACTCAGGATGACGGTTGAGAGTTCAGCTAAGCAGTTCTTGGGGAAAGGAAACTCGAGCACTCTTATTGCTTGTGTGAATTTTGTTGATTTAGCAGGAAGTGAGCGTGCATCTCAGACGGCATCGGCTGGTATGAGGCTAAAGGAGGGCAGCCATATTAACAGAAGCCTGCTTACTCTAGGAAAGGTCATTCGCCAACTCAGCAAGGGGAGAAATGGCCATATCCCATACAGAGATTCAAAGCTCACCCGGATACTGCAGTCATCACTGGGAGGCAATGCAAGAACAGCAATCATCTGCACGATGAGCCCGGCACACTGCCACATCGAGCAGTCGAGGAACACTCTTCTGTTTGCTAACTGCGCGAAAGATGTCGTCACCAATGCACAGGTCAACGTGGTTATGTCAGACAAGGCACTGGTGAAGCATCTTCAGAGAGAGATCGCTAGGTTGGAGAACGAGCTGAAGTTTCCTGCATCAGCCTCTTGCACTTCTCATGCAGAGATTCTCAGAGAAAAGGATGAACTAATTAAGAATCTGGAAGAACAGTTGAAGGAACTGATGGAGCAAAAGGACACCGTTCAATCTCAGCTTGATAATTTCCGCAAAGTTGCGAGCGACGGGGATATCAACAATCACTTAGCAAGGCGATGGAGTCGGTCTTCAGACTCGATTCCGCGCATTGTGTCAGAAGGTGCATTTTCATCTTCAGATACTCAAGACATTGACTATCAAGATCAAACAATGGATGAACTGTCAGTACCTCACTCGTTTCCACCAAGCAGCCAAATTTCTGACATCACAGAGGAACACGAAGCACAGAGAGTAGCTCATCGAGCTGAATCTGAGCCCCCTGAGGAGCACTGCAAGGAAGTGCAGTGCATCGAGACAAACAAGCTCAGGAGCAGGAGAAGCCAAGAATTCTTCCAAACACCTGAAAAGAAGACACACACTGATGATCAAAAGCATAGCGAAAGCATGTCAAATTCAGCAGAAAATGCCATCAAGCTATATGCGTGTGATTTTGAGCCGTCATTTGATCTCGAGAAGCCTGAAACTGAAGAATCTCTTGCCCTGAAGAGGTGTGTGGTTAGCTCCAGGGACAGTGCGCTTACTAGGAGTAGAAGCTGCAGAGCTAGCTTCATGGTCATTCCGAACAGCTGGTTCGATGACTCGGCGAGCACGACGCCGTCGTCCGAAACCTTCAGATATTCTACCAGAAGGCCAGAGAAGGTGAGGAAAAGCCTGAGTCCTGATGAGATCGCAGACAAGAGCACGGGCAACGCTGAAGAAGACAAGAGCACCTGCAATGCTGAAGAAGAGACTGCTGTGAATGACATCGGCTGCGTCACAGAAGTGAAGCAGAAGACAGAAATGAACCATGCACCCCAATCTTCAGAGCAACACCAGCCGAAAATTGCTAAAGAAGTTGCCACGGTCTCCCTTTCGAAATGGCACATCGATTTCGAGAGAAAGCAGCAGGAGATCATCGAGCTGTGGCATGACTGCAACGTCTCGATCGTACACCGGACCTACTTCTTCCTCCTCTTCAAGGGCGATCAGACGGACAGCATCTACATGGAGGTAGAGCACAGGCGACTCTCCTTCATCAAGAACTCCCTCATCGCAGACGGCGAGCTCCACGCTACCACCGCATCAAGCTTGAGGAATCTTCGGCATGAGAGGGACATGCTGTACAGGCAGATGGTGAGGAAGCTGCACCTGGCCGAGAAGGAGAGGCTGTACGGCAAGTGGGGGATCGACATGAGCACCAAGCAGAGGAGGCTGCAGCTGTCGCGGCGGATCTGGACGCAGACCGGGATGGATCACGTCAGGGAGAGCGCCGCCCTCGTCGCGAAGCTGGTCGAGCACCTGGAGAAGGGGCAGGCCATCA GGGAGATGTTCGGGCTGAGCTTCAGTTTCAAGCCACGCAGATCTTTCAGCTGGGTCGGCGTCTACTCCCGAGACTGAATTCTTGCCCGGCCATGGCGATGAACTGATGATGATGTCTCAGTGGTAGATGGATGCGTAGTGGAGGAGACGATGCTGCATGTCAGGAAGGAGAGGAGAGAGATTTTGCCGCCGGAATTGAACTGATGGATTGCCCCGTTCTATCTATGCATGTGAATTGTGATTCAG                         ]
[+] EMBL AK060588             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         CACTTAGCAAGGCGATGGAGTCGGTCTTCAGACTCGATTCCGCGCATTGTGTCAGAAGGTGCATTTTCATCTTCAGATACTCAAGACATTGACTATCAAGATCAAACAATGGATGAACTGTCAGTACCTCACTCGTTTCCACCAAGCAGCCAAATTTCTGACATCACAGAGGAACACGAAGCACAGAGAGTAGCTCATCGAGCTGAATCTGAGCCCCCTGAGGAGCACTGCAAGGAAGTGCAGTGCATCGAGACAAACAAGCTCAGGAGCAGGAGAAGCCAAGAATTCTTCCAAACACCTGAAAAGAAGACACACACTGATGATCAAAAGCATAGCGAAAGCATGTCAAATTCAGCAGAAAATGCCATCAAGC  TATGCGTGTGATTTTGAGCCGTCATTTGATCTCGAGAAGCCTGAAACTGAAGAATCTCTTGCCCTGAAGAGGTGTGTGGTTAGCTCCAGGGACAGTGCGCTTACTAGGAGTAGAAGCTGCAGAGCTAGCTTCATGGTCATTCCGAACAGCTGGTTCGATGACTCGGCGAGCACGACGCCGTCGTCCGAAACCTTCAGATATTCTACCAGAAGGCCAGAGAAGGTGAGGAAAAGCCTGAGTCCTGATGAGATCGCAGACAAGAGCACGGGCAACGCTGAAGAAGACAAGAGCACCTGCAATGCTGAAGAAGAGACTGCTGTGAATGACATCGGCTGCGTCACAGAAGTGAAGCAGAAGACAGAAATGAACCATGCACCCCAATCTTCAGAGCAACACCAGCCGAAAATTGCTAAAGAAGTTGCCACGGTCTCCCTTTCGAAATGGCACATCGATTTCGAGAGAAAGCAGCAGGAGATCATCGAGCTGTGGCATGACTGCAACGTCTCGATCGTACACCGGACCTACTTCTTCCTCCTCTTCAAGGGCGATCAGACGGACAGCATCTACATGGAGGTAGAGCACAGGCGACTCTCCTTCATCAAGAACTCCCTCATCGCAGACGGCGAGCTCCACGCTACCACCGCATCAAGCTTGAGGAATCTTCGGCATGAGAGGGACATGCTGTACAGGCAGATGGTGAGGAAGCTGCACCTGGCCGAGAAGGAGAGGCTGTACGGCAAGTGGGGGATCGACATGAGCACCAAGCAGAGGAGGCTGCAGCTGTCGCGGCGGATCTGGACGCAGACCGGGATGGATCACGTCAGGGAGAGCGCCGCCCTCGTCGCGAAGCTGGTCGAGCACCTGGAGAAGGGGCAGGCCATCA GGGAGATGTTCGGGCTGAGCTTCAGTTTCAAGCCACGCAGATCTTTCAGCTGGGTCGGCGTCTACTCCCGAGACTGAATTCTTGCCCGGCCATGGCGATGAGCTGATGATGATGTCTCAGTGGTAGATGGATGCGTAGTGGAGGAGACGATGCTGCATGTCAGGAAGGAGAGGAGAGAGATTTTGCCGCCGGAATTGAACTGATGGATTGCCCCGTTCTATCTATGCATGTGAATTGTGATTCAGATTTTTTGCTTCTGGCGTGAGTTCC]
[+] EMBL CA766211             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  CTGAAGAAGACAAGAGCACCTGCAATGCTGAAGAAGAGACTGCTGTGAATGACATCGGCTGCGTCACAGAAGTGAAGCAGAAGACAGAAATGAACCATGCACCCCAATCTTCAGAGCAACACCAGCCGAAAATTGCTAAAGAAGTTGCCACGGTCTCCCTTTCGAAATGGCACATCGATTTCGAGGGAAAGCAGCAGGAGATCATCGAGCTGTGGCATGACTGCAACGTCTCGATCGTACACCGGACCTACTTCTTCCTCCTCTTCAAGGGCGATCAGACGGACAGCATCTACATGGAGGTAGAGCACAGGCGACTCTCCTTCATCAAGAACTCCCTCATCGCAGACGGCGAGCTCCACGCTACCACCGCATCAAGCTTGAGGAATCTTCGGCATGAGAGGGACATGCTGTACAGGCAGATGGTGAGGAAGCTGCACCTGGCCGAGAAGGAGAGGCTGTACGGCAAGTGGGGGATCGACATGAGCACCAAGCAGAGGAGGCTGCAGCTGTCGCGGCGGATCTGGACGCAGACCGGGATGGATCACGTCAGGGAGAGCGCCGCCCTCGTCGCGAAGCTGGTCGAGCACCTGGAGAAGGGGCAGGCCATCAGGGGAGATGTTCGGGCTGAGCTTCAGTTTCAAGCCACGCAGATCTTTCAGCTGGGTCGGCGTCTACTNCCGAGACTGAATTCTTGCCCGGCCATGGCGATGAACTGATGATGATGTCTCAGTGGTAGATGGATGCCTAGTGGAGGAGACGATGCTGCATGTCAGGAAGGANAGG                                                                                                 ]




>consensus_8382#0
TTCACCTGCCCCATTGTGAATAGTCCCGTCGTCCCCTTCCTCCTCTTCCTCCTCCCTCTC
TCCTTTTTCTTCTTCTTCTTCTTTCGAGGAGAGGAAGGAGGCGGCCGCGCGCGCGCGGAG
GCGGGCAACCTCTCCTCGACTCCTCTCCCCCACCGTTTCGTCGTCCCCGCGTGGGAGGAA
GGGGAGGAGGCGGAGATGGCGGGGGAGGAGCGGCCGGAGCGGATCGTGGTGTCGGTGCGG
CTGCGGCCGGTGAACGCGCGCGAGGCGGAGCGCGGCGACGGCTCCGACTGGGAGTGCGCC
GGCCCGACCACGCTCACGTTCCGCGGCGCCGTCCCCGAGCGCGCCATGTTCCCCGCCTCC
TACAGCTACGACAGGGTGTTCAGCCATGAGTGCGGCACGAGGCAGGTGTACGACGAAGGC
GCCAGGCAGGTCGCCATGTCAGTGCTCAGTGGAATCAACGCGAGCATATTCGCGTACGGG
CAGACGAGCAGCGGCAAGACCTACACCATGGTTGGCATCACGGAGTACAGCATGTCGGAC
ATCTACGACTACATCGAGAAGCATCCTGAGAGAGAGTTCATCCTGAAGTTCTCGGCAATG
GAGATATACAACGAGGCTGTCAGGGACCTCCTGAGCTCTGACGCAACGCCTCTCAGGCTT
CTTGATGATCCAGAGAAAGGAACAGTTGTAGAAAAACTCACCGAGGAGACTCTGCGAGAC
AAAGGCCATCTTCTGGAGCTCCTTGCTGTGTGTGAAGCTCAAAGACAGATTGGGGAAACT
GCTATGAATGAAGCAAGCTCCAGATCTCATCAAATACTCAGGATGACGGTTGAGAGTTCA
GCTAAGCAGTTCTTGGGGAAAGGAAACTCGAGCACTCTTATTGCTTGTGTGAATTTTGTT
GATTTAGCAGGAAGTGAGCGTGCATCTCAGACGGCATCGGCTGGTATGAGGCTAAAGGAG
GGCAGCCATATTAACAGAAGCCTGCTTACTCTAGGAAAGGTCATTCGCCAACTCAGCAAG
GGGAGAAATGGCCATATCCCATACAGAGATTCAAAGCTCACCCGGATACTGCAGTCATCA
CTGGGAGGCAATGCAAGAACAGCAATCATCTGCACGATGAGCCCGGCACACTGCCACATC
GAGCAGTCGAGGAACACTCTTCTGTTTGCTAACTGCGCGAAAGATGTCGTCACCAATGCA
CAGGTCAACGTGGTTATGTCAGACAAGGCACTGGTGAAGCATCTTCAGAGAGAGATCGCT
AGGTTGGAGAACGAGCTGAAGTTTCCTGCATCAGCCTCTTGCACTTCTCATGCAGAGATT
CTCAGAGAAAAGGATGAACTAATTAAGAATCTGGAAGAACAGTTGAAGGAACTGATGGAG
CAAAAGGACACCGTTCAATCTCAGCTTGATAATTTCCGCAAAGTTGCGAGCGACGGGGAT
ATCAACAATCACTTAGCAAGGCGATGGAGTCGGTCTTCAGACTCGATTCCGCGCATTGTG
TCAGAAGGTGCATTTTCATCTTCAGATACTCAAGACATTGACTATCAAGATCAAACAATG
GATGAACTGTCAGTACCTCACTCGTTTCCACCAAGCAGCCAAATTTCTGACATCACAGAG
GAACACGAAGCACAGAGAGTAGCTCATCGAGCTGAATCTGAGCCCCCTGAGGAGCACTGC
AAGGAAGTGCAGTGCATCGAGACAAACAAGCTCAGGAGCAGGAGAAGCCAAGAATTCTTC
CAAACACCTGAAAAGAAGACACACACTGATGATCAAAAGCATAGCGAAAGCATGTCAAAT
TCAGCAGAAAATGCCATCAAGCTATATGCGTGTGATTTTGAGCCGTCATTTGATCTCGAG
AAGCCTGAAACTGAAGAATCTCTTGCCCTGAAGAGGTGTGTGGTTAGCTCCAGGGACAGT
GCGCTTACTAGGAGTAGAAGCTGCAGAGCTAGCTTCATGGTCATTCCGAACAGCTGGTTC
GATGACTCGGCGAGCACGACGCCGTCGTCCGAAACCTTCAGATATTCTACCAGAAGGCCA
GAGAAGGTGAGGAAAAGCCTGAGTCCTGATGAGATCGCAGACAAGAGCACGGGCAACGCT
GAAGAAGACAAGAGCACCTGCAATGCTGAAGAAGAGACTGCTGTGAATGACATCGGCTGC
GTCACAGAAGTGAAGCAGAAGACAGAAATGAACCATGCACCCCAATCTTCAGAGCAACAC
CAGCCGAAAATTGCTAAAGAAGTTGCCACGGTCTCCCTTTCGAAATGGCACATCGATTTC
GAGAGAAAGCAGCAGGAGATCATCGAGCTGTGGCATGACTGCAACGTCTCGATCGTACAC
CGGACCTACTTCTTCCTCCTCTTCAAGGGCGATCAGACGGACAGCATCTACATGGAGGTA
GAGCACAGGCGACTCTCCTTCATCAAGAACTCCCTCATCGCAGACGGCGAGCTCCACGCT
ACCACCGCATCAAGCTTGAGGAATCTTCGGCATGAGAGGGACATGCTGTACAGGCAGATG
GTGAGGAAGCTGCACCTGGCCGAGAAGGAGAGGCTGTACGGCAAGTGGGGGATCGACATG
AGCACCAAGCAGAGGAGGCTGCAGCTGTCGCGGCGGATCTGGACGCAGACCGGGATGGAT
CACGTCAGGGAGAGCGCCGCCCTCGTCGCGAAGCTGGTCGAGCACCTGGAGAAGGGGCAG
GCCATCAGGGAGATGTTCGGGCTGAGCTTCAGTTTCAAGCCACGCAGATCTTTCAGCTGG
GTCGGCGTCTACTCCCGAGACTGAATTCTTGCCCGGCCATGGCGATGAACTGATGATGAT
GTCTCAGTGGTAGATGGATGCGTAGTGGAGGAGACGATGCTGCATGTCAGGAAGGAGAGG
AGAGAGATTTTGCCGCCGGAATTGAACTGATGGATTGCCCCGTTCTATCTATGCATGTGA
ATTGTGATTCAGATTTTTTGCTTCTGGCGTGAGTTCC

consensusID : consensus_8382#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 675
fasta sequence 
                              [GAAGCCAAGAATTCTTCCAAACACCTGAAAAGAAGACACACACTGATGATCAAAAGCATAGCGAAAGCATGTCAAATTCAGCAGAAAATGCCATCAAGCTATATGCGTGTGATTNTGAGCCGTCATTTGATCTCGAGAAGCCTGAAACTGAAGAATCTCTTGCCCTGAAGAGGTGTGTGGTTAGCTCCAGGGACAGTGCGCTTACTAGGAGTAGAAGCTGCAGAGCTAGCTTCATGGTCATTCCGAACAGCTGGTTCGATGACTCGGCGAGCACGACGCCGTCGTCCGAAACCTTCAGATATTCTACCAGAAGGCCAGAGTAGGTGAGGAAAAGCCTGAGTCCTGATGAGATCGCAGACAAGAGCACGGGCAACGCTGAAGAAGACAAGAGCACCTGCAATGCTGAAGAAGAGACTGCTGTGAATGACATCGGCTGCGTCACAGAAGTGAAGCAGAAGACAGAAATGAACCATGCACCCCAATCTTCAGAGCAACACCAGGTACAGTAAAAATGGGAAATCTCTCTTGAGAATTCTCTCTCCATAAAAACCATTGACTGCAACATTTACATTTCTCTTGTCAAGCCGATTTCACTCTGGTGTACTGTCTGTCTACTATTGATTCATGCAGCCGAAAATTGCTAAAGAAGTTGCCACGGTCTCCCAAAAAAAAAAA]

[-] EMBL CA760378             [GAAGCCAAGAATTCTTCCAAACACCTGAAAAGAAGACACACACTGATGATCAAAAGCATAGCGAAAGCATGTCAAATTCAGCAGAAAATGCCATCAAGCTATATGCGTGTGATTNTGAGCCGTCATTTGATCTCGAGAAGCCTGAAACTGAAGAATCTCTTGCCCTGAAGAGGTGTGTGGTTAGCTCCAGGGACAGTGCGCTTACTAGGAGTAGAAGCTGCAGAGCTAGCTTCATGGTCATTCCGAACAGCTGGTTCGATGACTCGGCGAGCACGACGCCGTCGTCCGAAACCTTCAGATATTCTACCAGAAGGCCAGAGTAGGTGAGGAAAAGCCTGAGTCCTGATGAGATCGCAGACAAGAGCACGGGCAACGCTGAAGAAGACAAGAGCACCTGCAATGCTGAAGAAGAGACTGCTGTGAATGACATCGGCTGCGTCACAGAAGTGAAGCAGAAGACAGAAATGAACCATGCACCCCAATCTTCAGAGCAACACCAGGTACAGTAAAAATGGGAAATCTCTCTTGAGAATTCTCTCTCCATAAAAACCATTGACTGCAACATTTACATTTCTCTTGTCAAGCCGATTTCACTCTGGTGTACTGTCTGTCTACTATTGATTCATGCAGCCGAAAATTGCTAAAGAAGTTGCCACGGTCTCCCAAAAAAAAAAA]




>consensus_8382#1
GAAGCCAAGAATTCTTCCAAACACCTGAAAAGAAGACACACACTGATGATCAAAAGCATA
GCGAAAGCATGTCAAATTCAGCAGAAAATGCCATCAAGCTATATGCGTGTGATTNTGAGC
CGTCATTTGATCTCGAGAAGCCTGAAACTGAAGAATCTCTTGCCCTGAAGAGGTGTGTGG
TTAGCTCCAGGGACAGTGCGCTTACTAGGAGTAGAAGCTGCAGAGCTAGCTTCATGGTCA
TTCCGAACAGCTGGTTCGATGACTCGGCGAGCACGACGCCGTCGTCCGAAACCTTCAGAT
ATTCTACCAGAAGGCCAGAGTAGGTGAGGAAAAGCCTGAGTCCTGATGAGATCGCAGACA
AGAGCACGGGCAACGCTGAAGAAGACAAGAGCACCTGCAATGCTGAAGAAGAGACTGCTG
TGAATGACATCGGCTGCGTCACAGAAGTGAAGCAGAAGACAGAAATGAACCATGCACCCC
AATCTTCAGAGCAACACCAGGTACAGTAAAAATGGGAAATCTCTCTTGAGAATTCTCTCT
CCATAAAAACCATTGACTGCAACATTTACATTTCTCTTGTCAAGCCGATTTCACTCTGGT
GTACTGTCTGTCTACTATTGATTCATGCAGCCGAAAATTGCTAAAGAAGTTGCCACGGTC
TCCCAAAAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8382#0      TTCACCTGCCCCATTGTGAATAGTCCCGTCGTCCCCTTCCTCCTCTTCCTCCTCCCTCTC 60
consensus_8382#1      ------------------------------------------------------------
                                                                                  

consensus_8382#0      TCCTTTTTCTTCTTCTTCTTCTTTCGAGGAGAGGAAGGAGGCGGCCGCGCGCGCGCGGAG 120
consensus_8382#1      ------------------------------------------------------------
                                                                                  

consensus_8382#0      GCGGGCAACCTCTCCTCGACTCCTCTCCCCCACCGTTTCGTCGTCCCCGCGTGGGAGGAA 180
consensus_8382#1      ------------------------------------------------------------
                                                                                  

consensus_8382#0      GGGGAGGAGGCGGAGATGGCGGGGGAGGAGCGGCCGGAGCGGATCGTGGTGTCGGTGCGG 240
consensus_8382#1      ------------------------------------------------------------
                                                                                  

consensus_8382#0      CTGCGGCCGGTGAACGCGCGCGAGGCGGAGCGCGGCGACGGCTCCGACTGGGAGTGCGCC 300
consensus_8382#1      ------------------------------------------------------------
                                                                                  

consensus_8382#0      GGCCCGACCACGCTCACGTTCCGCGGCGCCGTCCCCGAGCGCGCCATGTTCCCCGCCTCC 360
consensus_8382#1      ------------------------------------------------------------
                                                                                  

consensus_8382#0      TACAGCTACGACAGGGTGTTCAGCCATGAGTGCGGCACGAGGCAGGTGTACGACGAAGGC 420
consensus_8382#1      ------------------------------------------------------------
                                                                                  

consensus_8382#0      GCCAGGCAGGTCGCCATGTCAGTGCTCAGTGGAATCAACGCGAGCATATTCGCGTACGGG 480
consensus_8382#1      ------------------------------------------------------------
                                                                                  

consensus_8382#0      CAGACGAGCAGCGGCAAGACCTACACCATGGTTGGCATCACGGAGTACAGCATGTCGGAC 540
consensus_8382#1      ------------------------------------------------------------
                                                                                  

consensus_8382#0      ATCTACGACTACATCGAGAAGCATCCTGAGAGAGAGTTCATCCTGAAGTTCTCGGCAATG 600
consensus_8382#1      ------------------------------------------------------------
                                                                                  

consensus_8382#0      GAGATATACAACGAGGCTGTCAGGGACCTCCTGAGCTCTGACGCAACGCCTCTCAGGCTT 660
consensus_8382#1      ------------------------------------------------------------
                                                                                  

consensus_8382#0      CTTGATGATCCAGAGAAAGGAACAGTTGTAGAAAAACTCACCGAGGAGACTCTGCGAGAC 720
consensus_8382#1      ------------------------------------------------------------
                                                                                  

consensus_8382#0      AAAGGCCATCTTCTGGAGCTCCTTGCTGTGTGTGAAGCTCAAAGACAGATTGGGGAAACT 780
consensus_8382#1      ------------------------------------------------------------
                                                                                  

consensus_8382#0      GCTATGAATGAAGCAAGCTCCAGATCTCATCAAATACTCAGGATGACGGTTGAGAGTTCA 840
consensus_8382#1      ------------------------------------------------------------
                                                                                  

consensus_8382#0      GCTAAGCAGTTCTTGGGGAAAGGAAACTCGAGCACTCTTATTGCTTGTGTGAATTTTGTT 900
consensus_8382#1      ------------------------------------------------------------
                                                                                  

consensus_8382#0      GATTTAGCAGGAAGTGAGCGTGCATCTCAGACGGCATCGGCTGGTATGAGGCTAAAGGAG 960
consensus_8382#1      ------------------------------------------------------------
                                                                                  

consensus_8382#0      GGCAGCCATATTAACAGAAGCCTGCTTACTCTAGGAAAGGTCATTCGCCAACTCAGCAAG 1020
consensus_8382#1      ------------------------------------------------------------
                                                                                  

consensus_8382#0      GGGAGAAATGGCCATATCCCATACAGAGATTCAAAGCTCACCCGGATACTGCAGTCATCA 1080
consensus_8382#1      ------------------------------------------------------------
                                                                                  

consensus_8382#0      CTGGGAGGCAATGCAAGAACAGCAATCATCTGCACGATGAGCCCGGCACACTGCCACATC 1140
consensus_8382#1      ------------------------------------------------------------
                                                                                  

consensus_8382#0      GAGCAGTCGAGGAACACTCTTCTGTTTGCTAACTGCGCGAAAGATGTCGTCACCAATGCA 1200
consensus_8382#1      ------------------------------------------------------------
                                                                                  

consensus_8382#0      CAGGTCAACGTGGTTATGTCAGACAAGGCACTGGTGAAGCATCTTCAGAGAGAGATCGCT 1260
consensus_8382#1      ------------------------------------------------------------
                                                                                  

consensus_8382#0      AGGTTGGAGAACGAGCTGAAGTTTCCTGCATCAGCCTCTTGCACTTCTCATGCAGAGATT 1320
consensus_8382#1      ------------------------------------------------------------
                                                                                  

consensus_8382#0      CTCAGAGAAAAGGATGAACTAATTAAGAATCTGGAAGAACAGTTGAAGGAACTGATGGAG 1380
consensus_8382#1      ------------------------------------------------------------
                                                                                  

consensus_8382#0      CAAAAGGACACCGTTCAATCTCAGCTTGATAATTTCCGCAAAGTTGCGAGCGACGGGGAT 1440
consensus_8382#1      ------------------------------------------------------------
                                                                                  

consensus_8382#0      ATCAACAATCACTTAGCAAGGCGATGGAGTCGGTCTTCAGACTCGATTCCGCGCATTGTG 1500
consensus_8382#1      ------------------------------------------------------------
                                                                                  

consensus_8382#0      TCAGAAGGTGCATTTTCATCTTCAGATACTCAAGACATTGACTATCAAGATCAAACAATG 1560
consensus_8382#1      ------------------------------------------------------------
                                                                                  

consensus_8382#0      GATGAACTGTCAGTACCTCACTCGTTTCCACCAAGCAGCCAAATTTCTGACATCACAGAG 1620
consensus_8382#1      ------------------------------------------------------------
                                                                                  

consensus_8382#0      GAACACGAAGCACAGAGAGTAGCTCATCGAGCTGAATCTGAGCCCCCTGAGGAGCACTGC 1680
consensus_8382#1      ------------------------------------------------------------
                                                                                  

consensus_8382#0      AAGGAAGTGCAGTGCATCGAGACAAACAAGCTCAGGAGCAGGAGAAGCCAAGAATTCTTC 1740
consensus_8382#1      -------------------------------------------GAAGCCAAGAATTCTTC 17
                                                                 *****************

consensus_8382#0      CAAACACCTGAAAAGAAGACACACACTGATGATCAAAAGCATAGCGAAAGCATGTCAAAT 1800
consensus_8382#1      CAAACACCTGAAAAGAAGACACACACTGATGATCAAAAGCATAGCGAAAGCATGTCAAAT 77
                      ************************************************************

consensus_8382#0      TCAGCAGAAAATGCCATCAAGCTATATGCGTGTGATTTTGAGCCGTCATTTGATCTCGAG 1860
consensus_8382#1      TCAGCAGAAAATGCCATCAAGCTATATGCGTGTGATTNTGAGCCGTCATTTGATCTCGAG 137
                      ************************************* **********************

consensus_8382#0      AAGCCTGAAACTGAAGAATCTCTTGCCCTGAAGAGGTGTGTGGTTAGCTCCAGGGACAGT 1920
consensus_8382#1      AAGCCTGAAACTGAAGAATCTCTTGCCCTGAAGAGGTGTGTGGTTAGCTCCAGGGACAGT 197
                      ************************************************************

consensus_8382#0      GCGCTTACTAGGAGTAGAAGCTGCAGAGCTAGCTTCATGGTCATTCCGAACAGCTGGTTC 1980
consensus_8382#1      GCGCTTACTAGGAGTAGAAGCTGCAGAGCTAGCTTCATGGTCATTCCGAACAGCTGGTTC 257
                      ************************************************************

consensus_8382#0      GATGACTCGGCGAGCACGACGCCGTCGTCCGAAACCTTCAGATATTCTACCAGAAGGCCA 2040
consensus_8382#1      GATGACTCGGCGAGCACGACGCCGTCGTCCGAAACCTTCAGATATTCTACCAGAAGGCCA 317
                      ************************************************************

consensus_8382#0      GAGAAGGTGAGGAAAAGCCTGAGTCCTGATGAGATCGCAGACAAGAGCACGGGCAACGCT 2100
consensus_8382#1      GAGTAGGTGAGGAAAAGCCTGAGTCCTGATGAGATCGCAGACAAGAGCACGGGCAACGCT 377
                      *** ********************************************************

consensus_8382#0      GAAGAAGACAAGAGCACCTGCAATGCTGAAGAAGAGACTGCTGTGAATGACATCGGCTGC 2160
consensus_8382#1      GAAGAAGACAAGAGCACCTGCAATGCTGAAGAAGAGACTGCTGTGAATGACATCGGCTGC 437
                      ************************************************************

consensus_8382#0      GTCACAGAAGTGAAGCAGAAGACAGAAATGAACCATGCACCCCAATCTTCAGAGCAACAC 2220
consensus_8382#1      GTCACAGAAGTGAAGCAGAAGACAGAAATGAACCATGCACCCCAATCTTCAGAGCAACAC 497
                      ************************************************************

consensus_8382#0      CAGCCG----AAAATTGCTAAAGAAGTTGCCACGGTCTCCCTTTCGAAATGGCACATCGA 2276
consensus_8382#1      CAGGTACAGTAAAAATGGGAAATCTCTCTTGAGAATTCTCTCTCCATAAAAAC-CATTGA 556
                      ***       **** **  ***    *    *   *   *  * *  **   * *** **

consensus_8382#0      TTTCGAGAGAAAGCAGCAGGAGATCATCGAGCTGTGGCATGACTGCAACGTCTCGATCGT 2336
consensus_8382#1      CTGCAACATTTA-CATTTCT--CTTGTCAAGCCG--ATTTCACTCTGGTGTACTGTCTGT 611
                       * * * *   * **        *  ** *** *     * ***     **   *   **

consensus_8382#0      ACACCGGACCTACTTCTTCCTCCTCTTCAAGGGCGATCAGACGGACAGCATCTACATGGA 2396
consensus_8382#1      CTACTA---TTGATTCATGCAGCCGAAAATTGCTAAAGAAGTTGCCACGGTCTCCCAAAA 668
                        **      *  *** * *  *     *  *   *  *    * **   *** *    *

consensus_8382#0      GGTAGAGCACAGGCGACTCTCCTTCATCAAGAACTCCCTCATCGCAGACGGCGAGCTCCA 2456
consensus_8382#1      AAAAAAA----------------------------------------------------- 675
                         * *                                                      

consensus_8382#0      CGCTACCACCGCATCAAGCTTGAGGAATCTTCGGCATGAGAGGGACATGCTGTACAGGCA 2516
consensus_8382#1      ------------------------------------------------------------
                                                                                  

consensus_8382#0      GATGGTGAGGAAGCTGCACCTGGCCGAGAAGGAGAGGCTGTACGGCAAGTGGGGGATCGA 2576
consensus_8382#1      ------------------------------------------------------------
                                                                                  

consensus_8382#0      CATGAGCACCAAGCAGAGGAGGCTGCAGCTGTCGCGGCGGATCTGGACGCAGACCGGGAT 2636
consensus_8382#1      ------------------------------------------------------------
                                                                                  

consensus_8382#0      GGATCACGTCAGGGAGAGCGCCGCCCTCGTCGCGAAGCTGGTCGAGCACCTGGAGAAGGG 2696
consensus_8382#1      ------------------------------------------------------------
                                                                                  

consensus_8382#0      GCAGGCCATCAGGGAGATGTTCGGGCTGAGCTTCAGTTTCAAGCCACGCAGATCTTTCAG 2756
consensus_8382#1      ------------------------------------------------------------
                                                                                  

consensus_8382#0      CTGGGTCGGCGTCTACTCCCGAGACTGAATTCTTGCCCGGCCATGGCGATGAACTGATGA 2816
consensus_8382#1      ------------------------------------------------------------
                                                                                  

consensus_8382#0      TGATGTCTCAGTGGTAGATGGATGCGTAGTGGAGGAGACGATGCTGCATGTCAGGAAGGA 2876
consensus_8382#1      ------------------------------------------------------------
                                                                                  

consensus_8382#0      GAGGAGAGAGATTTTGCCGCCGGAATTGAACTGATGGATTGCCCCGTTCTATCTATGCAT 2936
consensus_8382#1      ------------------------------------------------------------
                                                                                  

consensus_8382#0      GTGAATTGTGATTCAGATTTTTTGCTTCTGGCGTGAGTTCC 2977
consensus_8382#1      -----------------------------------------


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)