cluster # 8387

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 8387 cluster # 8387 Sequences # 5 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8387#0 length = 1568 sequences # 5
consensusID : consensus_8387#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1568
fasta sequence
                              [TTTCCCCTGCTTCCCACTTCCTCCACGCCTCCTCCTCCTCCTCGCCTTCGCTTTCCTCCCACGCCGTCGTCGCCACCGCCGCCGCCGCCATGTCGTCGTTCGCGCACCACCACCATGGCTCGCTGGTGGAGAAGGACGGGAGGATGTCCGCGCTGAGGAGTAGCCTTAGGCCGTACGAGGCGGCCGAGGAGATGGCCGCGGCGGCGGCCGCCGGCGGGCCGGCGGCGGCGTGGGGGGCGGTGGAGAGGGGGGCAGGGATGATGGGGGACGGGTTCTCGGTGGAGGACTTGCTGGACCTTGAGGAGCTCTGTGAGGTGGACAGGGACGGCGGCGAGCAAGGCGAGGCGGCGGCGGCGGCGGCGGCCGCCGTGGAGAAGGAGAGGTCTAGTGACTCCCATGGCTCATCGGTGGTGTCGTATGAGCCCATGCCGCTGCTGCCGCCGGTGATGGACCTGCCGGCGCATGACGTGGAGGAGCTTGAGTGGGTGTCCCGTATCATGGACGACTCGCTCGCCGAGCTCCCGCTGCCGCAGCTCCCCGCGGCGGCGGCGGCGTTGGCGGCGTGCGGCAAGCCGCAGCACCGGCGGCCGCACGAAGGCGCGGCGTCGGCGTTGTTGGACCCTATGCGCACCCCGACCATTTGCGCGCTGTCGACGGAGGCGCTGGTGCCGGTGAAGTCGCGGCGGAGCAAGCGGTCGCGTGCCTCCGTGTGGTCGCTCTCCGGCGCGCCCCTGTCCGACTCGACGTCGTCGTCGTCCACCGCGACAACCTCGTCCTGCTCGTCGTCGGCCTCCTTCTCGCCGTTCCTCCAGTACGTGGACTTCCCCGCGCTAGTCGCCTCCGACCTGCTCGACGAGCAGCCGCGCTCCAAGAAGTCCAAGCACGGCAAGAACGGCAAGCAGAAGCCCAAGAAGCGC-GGGCGCAAGCCGAAGCACCAGCAGCCGCCGCACCTCGCCGCCGCCGCCGGCGGCGGCGCCGCCCTCCCCGCCACGGGCGACCGCCGCTGCAGCCACTGCGGCGTCCAGAAGACGCCCCAGTGGCGCGCCGGCCCCGAGGGCGCCAAGACGCTCTGCAACGCCTGCGGCGTCCGCTACAAGTCGGGCCGCCTCCTCCCGGAGTACCGGCCGGCCTGCAGCCCGACGTTCGTCAGCAGCCTGCACTCCAACTCCCACCGCAAGGTGCTCGAGATGCGCCGCAAGAAGGAGACCCCCGTCATCGTGGCGGCCGCCGCGCCGGCCGTCGCCTCTTTCTAGCCTAGCCTAGCTAGCACCGCCGCGGTGGCTGTACATTTTCCTTTTTCCTGGCCGTATCATTAGTCTGCTGTACCGTACCTGAACTTTTTCCTCCCTTCTCTCTATTTTAGTCCCGTCGTACGGCTAGAATTCAGTAGTAGGAAAATTAGAGGTCTCATTTAGAGATTGTGTTAGGTTTAGTGATCAACATTTGCATGTTTTAGCATTAGATTGTTATAGTGTACTCTAGTAGAAAGCACTCGAGCTCTTCACAAGAAAAGCTATTCAAAGCTGCGTCTGGCAAGAATGGCTGGGAGGCAGAGGGGTACCGATGTC]

[+] EMBL AK109477             [TTTCCCCTGCTTCCCACTTCCTCCACGCCTCCTCCTCCTCCTCGCCTTCGCTTTCCTCCCACGCCGTCGTCGCCACCGCCGCCGCCGCCATGTCGTCGTTCGCGCACCACCACCATGGCTCGCTGGTGGAGAAGGACGGGAGGATGTCCGCGCTGAGGAGTAGCCTTAGGCCGTACGAGGCGGCCGAGGAGATGGCCGCGGCGGCGGCCGCCGGCGGGCCGGCGGCGGCGTGGGGGGCGGTGGAGAGGGGGGCAGGGATGATGGGGGACGGGTTCTCGGTGGAGGACTTGCTGGACCTTGAGGAGCTCTGTGAGGTGGACAGGGACGGCGGCGAGCAAGGCGAGGCGGCGGCGGCGGCGGCGGCCGCCGTGGAGAAGGAGAGGTCTAGTGACTCCCATGGCTCATCGGTGGTGTCGTATGAGCCCATGCCGCTGCTGCCGCCGGTGATGGACCTGCCGGCGCATGACGTGGAGGAGCTTGAGTGGGTGTCCCGTATCATGGACGACTCGCTCGCCGAGCTCCCGCTGCCGCAGCTCCCCGCGGCGGCGGCGGCGTTGGCGGCGTGCGGCAAGCCGCAGCACCGGCGGCCGCACGAAGGCGCGGCGTCGGCGTTGTTGGACCCTATGCGCACCCCGACCATTTGCGCGCTGTCGACGGAGGCGCTGGTGCCGGTGAAGTCGCGGCGGAGCAAGCGGTCGCGTGCCTCCGTGTGGTCGCTCTCCGGCGCGCCCCTGTCCGACTCGACGTCGTCGTCGTCCACCGCGACAACCTCGTCCTGCTCGTCGTCGGCCTCCTTCTCGCCGTTCCTCCAGTACGTGGACTTCCCCGCGCTAGTCGCCTCCGACCTGCTCGACGAGCAGCCGCGCTCCAAGAAGTCCAAGCACGGCAAGAACGGCAAGCAGAAGCCCAAGAAGCGC GGGCGCAAGCCGAAGCACCAGCAGCCGCCGCACCTCGCCGCCGCCGCCGGCGGCGGCGCCGCCCTCCCCGCCACGGGCGACCGCCGCTGCAGCCACTGCGGCGTCCAGAAGACGCCCCAGTGGCGCGCCGGCCCCGAGGGCGCCAAGACGCTCTGCAACGCCTGCGGCGTCCGCTACAAGTCGGGCCGCCTCCTCCCGGAGTACCGGCCGGCCTGCAGCCCGACGTTCGTCAGCAGCCTGCACTCCAACTCCCACCGCAAGGTGCTCGAGATGCGCCGCAAGAAGGAGACCCCCGTCATCGTGGCGGCCGCCGCGCCGGCCGTCGCCTCTTTCTAGCCTAGCCTAGCTAGCACCGCCGCGGTGGCTGTACATTTTCCTTTTTCCTGGCCGTATCGTTAGTCTGCTGTACCGTACCTGAACTTTTTCCTCCCTTCTCTCTATTTTAGTCCCGTCGTACGGCTAGAATTCAGTAGTAGGAAAATTAGAGGTCTCATTTAGAGATTGTGTTAGGTTTAGTGATCAACATTTGCATGTTTTAGCATTAGATTGTTATAGTGTACTCTAGTAGAAAGCACTCGAGCTCTTCAC                                                               ]
[+] EMBL CB651351             [                             TCCTCCTCCTCCTCGCCTTCGCTTTCCTCCCACGCCGTCGTCGCCACCGCCGCCGCCGCCATGTCGTCGTTCGCGCACCACCACCATGGCTCGCTGGTGGAGAAGGACGGGAGGATGTCCGCGCTGAGGAGTAGCCTTAGGCCGTACGAGGCGGCCGAGGAGATGGCCGCGGCGGCGGCCGCCGGCGGGCCGGCGGCGGCGTGGGGGGCGGTGGAGAGGGGGGCAGGGATGATGGGGGACGGGTTCTCGGTGGAGGACTTGCTGGACCTTGAGGAGCTCTGTGAGGTGGACAGGGACGGCGGCGAGCAAGGCGAGGCGGCGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CB646474             [                                                           CACGCCGTCGTCGCCACCGCCGCCGCCGCCACCCCGAAGATCGCGCACCACCACCATGGCTCGCTGGTGGAGAAGGACGGGAGGATGTCCGCGCTGAGGAGTAGCCTTAGGCCGTACGAGGCGGCCGAGGAGATGGCCGCGGCGGCGGCCGCCGGCGGGCCGGCGGCGGCGTGGGGGGCGGTGGAGAGGGGGGCACGGATGATGGGGGACGGGTTCTCGGTGGAGGACTTGCTGGACCTTGAGGAGCTCTGTGAGGTGGACAGGGACGGCGGCGAGCAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[-] EMBL CB646475             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           TCCAAGCACGGCAAGAACGGCAAGCAGAAGCCCAAGAAGCGCGGGGGGCAAGCTGAAGCACCAGCAGCCGCCGCACCTCGCCGCCGCCGCCGGCGGCGGCGCCGCCCTCCCCGCCACGGGCGACCGCCGCTGCAGCCACTGCGGCGTCCAGAAGACGCCCCAGTGGCGCGCCGGCCCCGAGGGCGCCAAGACGCTCTGCAACGCCTGCGGCGTCCGCTACAAGTCGGGCCGCCTCCTCCCGGAGTACCGGCCGGCCTGCAGCCCGACGTTCGTCAGCAGCCTGCACTCCAACTCCCACCGCAAGGTGCTCGAGATGCGCCGCAAGAAGGAGACCCCCGTCATCGTGGCGGCCGCCGCGCCGGCCGTCGCCTCTTTCTAGCCTAGCCTAGCTAGCACCGCCGCGGTGGCTGTACATTTTCCTTTTTCCTGGCCGTATCATTAGTCTGCTGTACCGTACCTGAACTTTTTCCTCCCTTCTCTGGATTTTAGTCCCGTCGTACGGCTAGAATTCAGTAGTAGGAAAATTAGAGGTCTCATTTAGAGATTGTTTAAGGGTTAGTGATCAAC                                                                                                                               ]
[-] EMBL CB651352             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               AGCACGGCAAGAACGGCAAGCAGAAGCCCAAGAAGCGC GGGCGCAAGCCGAAGCACCAGCAGCCGCCGCACCTCGCCGCCGCCGCCGGCGGCGGCGCCGCCCTCCCCGCCACGGGCGACCGCCGCTGCAGCCACTGCGGCGTCCAGAAGACGCCCCAGTGGCGCGCCGGCCCCGAGGGCGCCAAGACGCTCTGCAACGCCTGCGGCGTCCGCTACAAGTCGGGCCGCCTCCTCCCGGAGTACCGGCCGGCCTGCAGCCCGACGTTCGTCAGCAGCCTGCACTCCAACTCCCACCGCAAGGTGCTCGAGATGCGCCGCAAGAAGGAGACCCCCGTCATCGTGGCGGCCGCCGCGCCGGCCGTCGCCTCTTTTTAGCCTAGCCTAGCTAGCACCGCCGCGGTGGCTGTACATTTTCCTTTTTCCTGGCCGTATCATTAGTCTGCTGTACCGTACCTGAACTTTTTCCTCCCTTCTCTCTATTTTAGTCCCGTCGTACGGCTAGAATTCAGTAGTAGGAAAATTAGAGGTCTCATTTAGAGATTGTGTTAGGTTTAGTGATCAACATTTGCATGTTTTAGCATTAGATTGTTATAGTGTACTCTAGTAGAAAGCACTCGAGCTCTTCACAAGAAAAGCTATTCAAAGCTGCGTCTGGCAAGAATGGCTGGGAGGCAGAGGGGTACCGATGTC]




>consensus_8387#0
TTTCCCCTGCTTCCCACTTCCTCCACGCCTCCTCCTCCTCCTCGCCTTCGCTTTCCTCCC
ACGCCGTCGTCGCCACCGCCGCCGCCGCCATGTCGTCGTTCGCGCACCACCACCATGGCT
CGCTGGTGGAGAAGGACGGGAGGATGTCCGCGCTGAGGAGTAGCCTTAGGCCGTACGAGG
CGGCCGAGGAGATGGCCGCGGCGGCGGCCGCCGGCGGGCCGGCGGCGGCGTGGGGGGCGG
TGGAGAGGGGGGCAGGGATGATGGGGGACGGGTTCTCGGTGGAGGACTTGCTGGACCTTG
AGGAGCTCTGTGAGGTGGACAGGGACGGCGGCGAGCAAGGCGAGGCGGCGGCGGCGGCGG
CGGCCGCCGTGGAGAAGGAGAGGTCTAGTGACTCCCATGGCTCATCGGTGGTGTCGTATG
AGCCCATGCCGCTGCTGCCGCCGGTGATGGACCTGCCGGCGCATGACGTGGAGGAGCTTG
AGTGGGTGTCCCGTATCATGGACGACTCGCTCGCCGAGCTCCCGCTGCCGCAGCTCCCCG
CGGCGGCGGCGGCGTTGGCGGCGTGCGGCAAGCCGCAGCACCGGCGGCCGCACGAAGGCG
CGGCGTCGGCGTTGTTGGACCCTATGCGCACCCCGACCATTTGCGCGCTGTCGACGGAGG
CGCTGGTGCCGGTGAAGTCGCGGCGGAGCAAGCGGTCGCGTGCCTCCGTGTGGTCGCTCT
CCGGCGCGCCCCTGTCCGACTCGACGTCGTCGTCGTCCACCGCGACAACCTCGTCCTGCT
CGTCGTCGGCCTCCTTCTCGCCGTTCCTCCAGTACGTGGACTTCCCCGCGCTAGTCGCCT
CCGACCTGCTCGACGAGCAGCCGCGCTCCAAGAAGTCCAAGCACGGCAAGAACGGCAAGC
AGAAGCCCAAGAAGCGCGGGCGCAAGCCGAAGCACCAGCAGCCGCCGCACCTCGCCGCCG
CCGCCGGCGGCGGCGCCGCCCTCCCCGCCACGGGCGACCGCCGCTGCAGCCACTGCGGCG
TCCAGAAGACGCCCCAGTGGCGCGCCGGCCCCGAGGGCGCCAAGACGCTCTGCAACGCCT
GCGGCGTCCGCTACAAGTCGGGCCGCCTCCTCCCGGAGTACCGGCCGGCCTGCAGCCCGA
CGTTCGTCAGCAGCCTGCACTCCAACTCCCACCGCAAGGTGCTCGAGATGCGCCGCAAGA
AGGAGACCCCCGTCATCGTGGCGGCCGCCGCGCCGGCCGTCGCCTCTTTCTAGCCTAGCC
TAGCTAGCACCGCCGCGGTGGCTGTACATTTTCCTTTTTCCTGGCCGTATCATTAGTCTG
CTGTACCGTACCTGAACTTTTTCCTCCCTTCTCTCTATTTTAGTCCCGTCGTACGGCTAG
AATTCAGTAGTAGGAAAATTAGAGGTCTCATTTAGAGATTGTGTTAGGTTTAGTGATCAA
CATTTGCATGTTTTAGCATTAGATTGTTATAGTGTACTCTAGTAGAAAGCACTCGAGCTC
TTCACAAGAAAAGCTATTCAAAGCTGCGTCTGGCAAGAATGGCTGGGAGGCAGAGGGGTA
CCGATGTC
clustalw multiple alignements is not computed in this case