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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8441#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 2320 fasta sequence
[TCTCGCCTGCTGCTTCGTTTGTTGGGTTGCCTCGTCGGCGGCGACGGTGGCGCCGGCGGCCGGTGTCGCCGTGACGAGCCTTCCTGGATTCGACGGCCCACTGCCATTCTCCCTCGAGACCGGATACGTGGAGGTGAACGAGAGTACGGGCGTGCGTCTCTTCTACTACTTTGTCCAGTCAGAGAAGGATCCTGATGTAGACCCACTTTTATTGTGGCTATCAGGTGGGCCTGGCTGTTCTAGTCTCTCTGGCCTAACCCACGAGATAGGACCATTCCAATTCGCCGCAAAACGGTATTACAGTGGAGGATTGCCGAAAATTATCTATCAACCAGAGACTTGGACTAAGGTGAGCAACATAATTTTTGTGGATTCTCCCGTAGGGGCAGGATTCTCATACGCGGCAACACAGGAAGGCTCCAAGACTAGCGATACCAAGACAGTGAAACAGCTTGTTATTTTCCTCAGAAAGGTAACTCGGTGCTGACCAATGCCCCAGAATTTCAGATTTTTACACCACCTATCTTGTATGGAATTGGTTTAATATATTTTTTGTTTGCCTTATGGTTTTCTTCGAGAACATCCGCAGGCTTCGAATGCCATTTCAGTAACATCCACCATCCGTTACAAAATATTATGTTTTTTTAGGTTGCTTAGAAAATACTACAGTTAGGACGAAAGATTTCTTTTCTGTCACTTGAGTTATCAATTTTTAAAGTTTAAATATATATCTTAGATTTCCTTTCCAAACATCTGATTGGTGATATAAAATTGGAATCCTAGAGATACTTATATTTTGAAATGGAGAGAGAATGAGAAAGTGCTTGTACGGCACGTAATTAAGTTGCACTGGTTATTACTACTGAAATTGTAAATATTATATTTTAAATAATATGTTGAATAAGTTGGCAATATTTCGGTGAACGAACACTTGGACTTTTTTTATTTCTGAAGAAGGAACAATTTACTTTGTTATTATGTTCCAAAAATCAAAATTATTAATTAGAAATACTTATATAGAATGGATCCTTATGTTTCTGCTGTTACATTGCTGATGTTGGGTCCGCAGCATTTGCTATCATGTAATATAGAAATTTAGAATTAGTGAGTATCAGTAAACCCAGTTTAGATATCATTTTAAATTTAATAATACCAAAACATATAAATAAGAGATATCAAGTTGTACTTTGATTGTGCCTCGATTATCTTTTACATGGTTTAATAATTCTAAAGCTCATAATTAATAAGTGTATTGAACTGCATTTTGGGTTGGGGATCAAAATAATAGCCATTAAGGGTTAAAAAATTCCAAAATTGGTAATTAATAAACAATTGAGTGGTACTGGATAAAGAGTTTCAATGGTAGTTTTTCAAGGTTTTAAATCATTCCGGAAAATTCGATATAAGTGAGTATTCACATATGTATCNCAGTTGGGAGCCCCAAATAATAAAATTCAANGATTTAATAGTTCCACGGGGAAATAATTAATCACTAATTTGTTTTCGCCAAAGGTATATTTATTTAAAAAAAAATTCTGATTCCGGTCTATAGTAAATAATACAATCCAACTACCTAAGGGCCTTAATTCCAAATTACCTACTAGTGGAATATAATATAAAAGATGTATTCGGGTGTTGGTTATTCCCTCGTGATTATTCAATATGATGCCATTTGAAATGAAATATGTGTTAACTTAGCGATATATAAAATATAATTAAGAAAAGATTCACTTACTGCCCGTTTAAAGATGCTGCCTGGACAGGTGGAAAATATTTAAGTGCATGCTGAAGATTGAGCGAGGTTGATTTGTAATCCCTCCGTCCACTGACTAATGCGCGCTCTTCAAAACTAGTATTTGACTTTAAATTTATTATATATTATAAACAAAAGTTGTAAATCCAAAGGTTAATCTAATCATATTATTTTCATAAAAAAATTTAATTCCTAATAAAATAATTATTGGTCCAACATTTAGGTTGAGTTCGTTCATTTACTTTCCCACTCATTTCTCTTTTTCCATGTGCACACTTTTCAAACTACTAAACAGTGTATTTTTTGCAAAAAAAAAATTATATAGTAAAGTTTCTTTGAAAATCATATTAATCTATTTTTTAAAAAATGATAATACTTAATTAATAATGTGCTAATAAGTAACTATGTTTTGCGTAAGTGAAAGGTTAGTTTCAACCTCAATAAAAGAACTCAGTCTTAAAATTTGAATCTTGTGAACGCCATATTCAGTGGGACAAAGAGAGTACTATTATGATTTTGTAAGCTTCTAATTAATGAAACGGGAAGTTTAGTCATTCGTGCTTCTTC]
[+] EMBL AK072925 [TCTCGCCTGCTGCTTCGTTTGTTGGGTTGCCTCGTCGGCGGCGACGGTGGCGCCGGCGGCCGGTGTCGCCGTGACGAGCCTTCCTGGATTCGACGGCCCACTGCCATTCTCCCTCGAGACCGGATACGTGGAGGTGAACGAGAGTACGGGCGTGCGTCTCTTCTACTACTTTGTCCAGTCAGAGAAGGATCCTGATGTAGACCCACTTTTATTGTGGCTATCAGGTGGGCCTGGCTGTTCTAGTCTCTCTGGCCTAACCCACGAGATAGGACCATTCCAATTCGCCGCAAAACGGTATTACAGTGGAGGATTGCCGAAAATTATCTATCAACCAGAGACTTGGACTAAGGTGAGCAACATAATTTTTGTGGATTCTCCCGTAGGGGCAGGATTCTCATACGCGGCAACACAGGAAGGCTCCAAGACTAGCGATACCAAGACAGTGAAACAGCTTGTTATTTTCCTCAGAAAGGTAACTCGGTGCTGACCAATGCCCCAGAATTTCAGATTTTTACACCACCTATCTTGTATGGAATTGGTTTAATATATTTTTTGTTTGCCTTATGGTTTTCTTCGAGAACATCCGCAGGCTTCGAATGCCATTTCAGTAACATCCACCATCCGTTACAAAATATTATGTTTTTTTAGGTTGCTTAGAAAATACTACAGTTAGGACGAAAGATTTCTTTTCTGTCACTTGAGTTATCAATTTTTAAAGTTTAAATATATATCTTAGATTTCCTTTCCAAACATCTGATTGGTGATATAAAATTGGAATCCTAGAGATACTTATATTTTGAAATGGAGAGAGAATGAGAAAGTGCTTGTACGGCACGTAATTAAGTTGCACTGGTTATTACTACTGAAATTGTAAATATTATATTTTAAATAATATGTTGAATAAGTTGGCAATATTTCGGTGAACGAACACTTGGACTTTTTTTATTTCTGAAGAAGGAACAATTTACTTTGTTATTATGTTCCAAAAATCAAAATTATTAATTAGAAATACTTATATAGAATGGATCCTTATGTTTCTGCTGTTACATTGCTGATGTTGGGTCCGCAGCATTTGCTATCATGTAATATAGAAATTTAGAATTAGTGAGTATCAGTAAACCCAGTTTAGATATCATTTTAAATTTAATAATACCAAAACATATAAATAAGAGATATCAAGTTGTACTTTGATTGTGCCTCGATTATCTTTTACATGGTTTAATAATTCTAAAGCTCATAATTAATAAGTGTATTGAACTGCATTTTGGGTTGGGGATCAAAATAATAGCCATTAAGGGTTAAAAAATTCCAAAATTGGTAATTAATAAACAATTGAGTGGTACTGGATAAAGAGTTTCAATGGTAGTTTTTCAAGGTTTTAAATCATTCCGGAAAATTCGATATAAGTGAGTATTCACATATGTATCNCAGTTGGGAGCCCCAAATAATAAAATTCAANGATTTAATAGTTCCACGGGGAAATAATTAATCACTAATTTGTTTTCGCCAAAGGTATATTTATTTAAAAAAAAATTCTGATTCCGGTCTATAGTAAATAATACAATCCAACTACCTAAGGGCCTTAATTCCAAATTACCTACTAGTGGAATATAATATAAAAGATGTATTCGGGTGTTGGTTATTCCCTCGTGATTATTCAATATGATGCCATTTGAAATGAAATATGTGTTAACTTAGCGATATATAAAATATAATTAAGAAAAGATTCACTTACTGCCCGTTTAAAGATGCTGCCTGGACAGGTGGAAAATATTTAAGTGCATGCTGAAGATTGAGCGAGGTTGATTTGTAATCCCTCCGTCCACTGACTAATGCGCGCTCTTCAAAACTAGTATTTGACTTTAAATTTATTATATATTATAAACAAAAGTTGTAAATCCAAAGGTTAATCTAATCATATTATTTTCATAAAAAAATTTAATTCCTAATAAAATAATTATTGGTCCAACATTTAGGTTGAGTTCGTTCATTTACTTTCCCACTCATTTCTCTTTTTCCATGTGCACACTTTTCAAACTACTAAACAGTGTATTTTTTGCAAAAAAAAAATTATATAGTAAAGTTTCTTTGAAAATCATATTAATCTATTTTTTAAAAAATGATAATACTTAATTAATAATGTGCTAATAAGTAACTATGTTTTGCGTAAGTGAAAGGTTAGTTTCAACCTCAATAAAAGAACTCAGTCTTAAAATTTGAATCTTGTGAACGCCATATTCAGTGGGACAAAGAGAGTACTATTATGATTTTGTAAGCTTCTAATTAATGAAACGGGAAGTTTAGTCATTCGTGCTTCTTC]
consensusID : consensus_8441#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 1852 fasta sequence
[TCTCGCCTGCTGCTTCGTTTGTTGGGTTGCCTCGTCGGCGGCGACGGTGGCGCCGGCGGCCGGTGTCGCCGTGACGAGCCTTCCTGGATTCGACGGCCCACTGCCATTCTCCCTCGAGACCGGATACGTGGAGGTGAACGAGAGTACGGGCGTGCGTCTCTTCTACTACTTTGTCCAGTCAGAGAAGGATCCTGATGTAGACCCACTTTTATTGTGGCTATCAGGTGGGCCTGGCTGTTCTAGTCTCTCTGGCCTAACCCACGAGATAGGACCATTCCAATTCGCCGCAAAACGGTATTACAGTGGAGGATTGCCGAAAATTATCTATCAACCAGAGACTTGGACTAAGGTGAGCAACATAATTTTTGTGGATTCTCCCGTAGGGGCAGGATTCTCATACGCGGCAACACAGGAAGGCTCCAAGACTAGCGATACCAAGACAGTGAAACAGCTTGTTATTTTCCTCAGAAAGTGGCTTCATGATCATCCCCAGTTCTTGCTGAATCCGCTGTATATTGGAGGTGACTCATATAGTGGTTATATTGTACCTACACTTGCGCTAGCGATTGATGAAAGCAATGATTCAGGAGATAAACCAATTTTGAATCTCATGGGGTACGTTGCTGGCAATCCAAGGACCGAACGCCAATTTGATGAAGGTGGTAAAATTCCATTTCTCCATGGCATGGGACTTATATCCAATGAACTTTATGAGCATGCTAAGGAAACCTGCAGAGGGAAATACAATGCCCCAGGGAACGCTCGATGTGAGCAGTCTATGAAAGTTATACACGATTGCACAAAGGACATCAACATGCTACATGTTCTTGAGCCATTTTGTGAAGACGTCGGGAGCCCCGGGATCCATAACAATGAAGCGACAGATGGAATGATTAGGCTCATGCTGGAGTCTGCTTCTGCTGCTAATGATGACATTATTGAATTCAAGTGTAGAAAAGCTTCTTATGTGGTTTTACAAATATGGGCAAATGATAAAACTGTAAGGGAGAGTCTTGGTGTGCACAAGGGAACAGTTGGAGAGTGGATAAGATGCAATTTCGATGTAGATTACATTGCAGATGTGTATAGTACAGTGGAGTATCATTTGACGCTAATGAGAAAAGGATACCGAGCATTGATATACAGCGGTGATCATGATTGTCAAGTTCCCTTCACTGGTACACAAGCATGGATTAGATTTCTGAACCTTTCTGTAATTGATGATTGGCGACCATGGTATGCTGCTGGACAAGTTGCCGGATTCACGAGAAGCTATGCGAATAATAACCTGATATATGCAACTGTGAAGGGTGCTGGGCACACTGCTCCAGAGTATAAACCTAAGGAGTGTCTCGAGATGTTTGCTAGATGGATTTCAGGCAATACTCTCTGATGTATATTCCTCAATCAGATCAAGTCAACTATGAAAACATGAGTAAATGATAACATCAGAGATATGAAGAAAAACATTTGCTGCATGTAATATTTTGGAAAACCTTAAGAACTCTCACTAGTACATAGATATCTATGACGGAGACCAGTGGTCCATAAAAGGGGCATTCATCTGTGTTGGGCCGAAAATAATCCCGTTGAAGATTGGGCTTCACGGCCATGCCCGTCACCGTTGTCCCCTCATCGGTGATGGGATTCAGTTGTGGCCCGACACAGGTCATCTATGATGGGCTTCACGCATGCAATCCAGCATACATGAAGATATATTTTCTTCCTATATATGTACAACTCACTTCGTGTCATTTACAGGTACAAACCATTGGATCAGCATGCATCTGTACCAAACAAAAATTTGATCAATTATCCTTTCCTATACAAAGGCTAAAAAATATAGCAAAGA]
[+] EMBL AK121476 [TCTCGCCTGCTGCTTCGTTTGTTGGGTTGCCTCGTCGGCGGCGACGGTGGCGCCGGCGGCCGGTGTCGCCGTGACGAGCCTTCCTGGATTCGACGGCCCACTGCCATTCTCCCTCGAGACCGGATACGTGGAGGTGAACGAGAGTACGGGCGTGCGTCTCTTCTACTACTTTGTCCAGTCAGAGAAGGATCCTGATGTAGACCCACTTTTATTGTGGCTATCAGGTGGGCCTGGCTGTTCTAGTCTCTCTGGCCTAACCCACGAGATAGGACCATTCCAATTCGCCGCAAAACGGTATTACAGTGGAGGATTGCCGAAAATTATCTATCAACCAGAGACTTGGACTAAGGTGAGCAACATAATTTTTGTGGATTCTCCCGTAGGGGCAGGATTCTCATACGCGGCAACACAGGAAGGCTCCAAGACTAGCGATACCAAGACAGTGAAACAGCTTGTTATTTTCCTCAGAAAGTGGCTTCATGATCATCCCCAGTTCTTGCTGAATCCGCTGTATATTGGAGGTGACTCATATAGTGGTTATATTGTACCTACACTTGCGCTAGCGATTGATGAAAGCAATGATTCAGGAGATAAACCAATTTTGAATCTCATGGGGTACGTTGCTGGCAATCCAAGGACCGAACGCCAATTTGATGAAGGTGGTAAAATTCCATTTCTCCATGGCATGGGACTTATATCCAATGAACTTTATGAGCATGCTAAGGAAACCTGCAGAGGGAAATACAATGCCCCAGGGAACGCTCGATGTGAGCAGTCTATGAAAGTTATACACGATTGCACAAAGGACATCAACATGCTACATGTTCTTGAGCCATTTTGTGAAGACGTCGGGAGCCCCGGGATCCATAACAATGAAGCGACAGATGGAATGATTAGGCTCATGCTGGAGTCTGCTTCTGCTGCTAATGATGACATTATTGAATTCAAGTGTAGAAAAGCTTCTTATGTGGTTTTACAAATATGGGCAAATGATAAAACTGTAAGGGAGAGTCTTGGTGTGCACAAGGGAACAGTTGGAGAGTGGATAAGATGCAATTTCGATGTAGATTACATTGCAGATGTGTATAGTACAGTGGAGTATCATTTGACGCTAATGAGAAAAGGATACCGAGCATTGATATACAGCGGTGATCATGATTGTCAAGTTCCCTTCACTGGTACACAAGCATGGATTAGATTTCTGAACCTTTCTGTAATTGATGATTGGCGACCATGGTATGCTGCTGGACAAGTTGCCGGATTCACGAGAAGCTATGCGAATAATAACCTGATATATGCAACTGTGAAGGGTGCTGGGCACACTGCTCCAGAGTATAAACCTAAGGAGTGTCTCGAGATGTTTGCTAGATGGATTTCAGGCAATACTCTCTGATGTATATTCCTCAATCAGATCAAGTCAACTATGAAAACATGAGTAAATGATAACATCAGAGATATGAAGAAAAACATTTGCTGCATGTAATATTTTGGAAAACCTTAAGAACTCTCACTAGTACATAGATATCTATGACGGAGACCAGTGGTCCATAAAAGGGGCATTCATCTGTGTTGGGCCGAAAATAATCCCGTTGAAGATTGGGCTTCACGGCCATGCCCGTCACCGTTGTCCCCTCATCGGTGATGGGATTCAGTTGTGGCCCGACACAGGTCATCTATGATGGGCTTCACGCATGCAATCCAGCATACATGAAGATATATTTTCTTCCTATATATGTACAACTCACTTCGTGTCATTTACAGGTACAAACCATTGGATCAGCATGCATCTGTACCAAACAAAAATTTGATCAATTATCCTTTCCTATACAAAGGCTAAAAAATATAGCAAAGA]
[+] EMBL AK106123 [TCTCGCCTGCTGCTTCGTTTGTTGGGTTGCCTCGTCGGCGGCGACGGTGGCGCCGGCGGCCGGTGTCGCCGTGACGAGCCTTCCTGGATTCGACGGCCCACTGCCATTCTCCCTCGAGACCGGATACGTGGAGGTGAACGAGAGTACGGGCGTGCGTCTCTTCTACTACTTTGTCCAGTCAGAGAAGGATCCTGATGTAGACCCACTTTTATTGTGGCTATCAGGTGGGCCTGGCTGTTCTAGTCTCTCTGGCCTAACCCACGAGATAGGACCATTCCAATTCGCCGCAAAACGGTATTACAGTGGAGGATTGCCGAAAATTATCTATCAACCAGAGACTTGGACTAAGGTGAGCAACATAATTTTTGTGGATTCTCCCGTAGGGGCAGGATTCTCATACGCGGCAACACAGGAAGGCTCCAAGACTAGCGATACCAAGACAGTGAAACAGCTTGTTATTTTCCTCAGAAAGTGGCTTCATGATCATCCCCAGTTCTTGCTGAATCCGCTGTATATTGGAGGTGACTCATATAGTGGTTATATTGTACCTACACTTGCGCTAGCGATTGATGAAAGCAATGATTCAGGAGATAAACCAATTTTGAATCTCATGGGGTACGTTGCTGGCAATCCAAGGACCGAACGCCAATTTGATGAAGGTGGTAAAATTCCATTTCTCCATGGCATGGGACTTATATCCAATGAACTTTATGAGCATGCTAAGGAAACCTGCAGAGGGAAATACAATGCCCCAGGGAACGCTCGATGTGAGCAGTCTATGAAAGTTATACACGATTGCACAAAGGACATCAACATGCTACATGTTCTTGAGCCATTTTGTGAAGACGTCGGGAGCCCCGGGATCCATAACAATGAAGCGACAGATGGAATGATTAGGCTCATGCTGGAGTCTGCTTCTGCTGCTAATGATGACATTATTGAATTCAAGTGTAGAAAAGCTTCTTATGTGGTTTTACAAATATGGGCAAATGATAAAACTGTAAGGGAGAGTCTTGGTGTGCACAAGGGAACAGTTGGAGAGTGGATAAGATGCAATTTCGATGTAGATTACATTGCAGATGTGTATAGTACAGTGGAGTATCATTTGACGCTAATGAGAAAAGGATACCGAGCATTGATATACAGCGGTGATCATGATTGTCAAGTTCCCTTCACTGGTACACAAGCATGGATTAGATTTCTGAACCTTTCTGTAATTGATGATTGGCGACCATGGTATGCTGCTGGACAAGTTGCCGGATTCACGAGAAGCTATGCGAATAATAACCTGATATATGCAACTGTGAAGGGTGCTGGGCACACTGCTCCAGAGTATAAACCTAAGGAGTGTCTCGAGATGTTTGCTAGATGGATTTCAGGCAATACTCTCTGATGTATATTCCTCAATCAGATCAAGTCAACTATGAAAACATGAGTAAATGATAACATCAGAGATATGAAGAAAAACATTTGCTGCATGTAATATTTTGGAAAACCTTAAGAACTCTCACTAGTACATAGATATCTAT ]
consensusID : consensus_8441#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 792 fasta sequence
[ATACGTAGTACCATAGTAGAAATACCATGTGCACACCAAGACTCTCCCTTACAGTTTTATCATTTGCCCATATTTGTAAAACCACATAAGAAGCTTTCTGCAGTAAATAAGCAAAATTAGACTTTCTTAGGTCAAGTGCTATCCAAGGAAAATTGGAAAACAGATAAATTGGAATTCAATGGGATGCAGTAATGTTGTATTGTTTTTATGCACTCAACTCTACACTTGAATTCAATAATGTCATCATTAGCAGCAGAAGCAGACTCCAGCATGAGCCTAATCATTCCATCTGTCGCTTCATTGTTATGGATCCCGGGGCTCCCGACGTCTTCACAAAATGGCTCAAGAACATGTAGCATGTTGATGTCCTTTGTGCAATCGTGTATAACTTTCATAGACTGCTCACATCGAGCATTCCCTGGGGCATTGTATTTCCCTCTACAGGTTTCCTTAGCATGCTCATAAAGTTCATTGGATATAAGTCCCATGCCATGGAGAAATGGAATTTTACCACCTTCATCAAATTGGCGTTCGGTCCTTGGATTGCCAGCAACGTACCCCTGCGTCATGTAGACAAGGTAAAGAAATTGGTGGAAGGCAAAAGTTAATTGCAGGCCACATTGGTACTACACATTAGCAAGCAATTTATGTAGACTATTGACGTAATTAAGATTCCAAATATAAAATTTCATGATTGATATTTATCTGATAAGATCGATCAGACCATGAGATTCAAAATTGGTTTATCTCCTGAATCATTGCCTGAAAAATATAGACACATGGTCCGTAGTT]
[+] EMBL CB627997 [ATACGTAGTACCATAGTAGAAATACCATGTGCACACCAAGACTCTCCCTTACAGTTTTATCATTTGCCCATATTTGTAAAACCACATAAGAAGCTTTCTGCAGTAAATAAGCAAAATTAGACTTTCTTAGGTCAAGTGCTATCCAAGGAAAATTGGAAAACAGATAAATTGGAATTCAATGGGATGCAGTAATGTTGTATTGTTTTTATGCACTCAACTCTACACTTGAATTCAATAATGTCATCATTAGCAGCAGAAGCAGACTCCAGCATGAGCCTAATCATTCCATCTGTCGCTTCATTGTTATGGATCCCGGGGCTCCCGACGTCTTCACAAAATGGCTCAAGAACATGTAGCATGTTGATGTCCTTTGTGCAATCGTGTATAACTTTCATAGACTGCTCACATCGAGCATTCCCTGGGGCATTGTATTTCCCTCTACAGGTTTCCTTAGCATGCTCATAAAGTTCATTGGATATAAGTCCCATGCCATGGAGAAATGGAATTTTACCACCTTCATCAAATTGGCGTTCGGTCCTTGGATTGCCAGCAACGTACCCCTGCGTCATGTAGACAAGGTAAAGAAATTGGTGGAAGGCAAAAGTTAATTGCAGGCCACATTGGTACTACACATTAGCAAGCAATTTATGTAGACTATTGACGTAATTAAGATTCCAAATATAAAATTTCATGATTGATATTTATCTGATAAGATCGATCAGACCATGAGATTCAAAATTGGTTTATCTCCTGAATCATTGCCTGAAAAATATAGACACATGGTCCGTAGTT]
consensusID : consensus_8441#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 415 fasta sequence
[TCTCGCCTGCTGCTTCGTTTGTTGGGTTGCCTCGTCGGCGGCGACGGTGGCGCCGGCGGCCGGTGTCGCCGTGACGAGCCTTCCTGGATTCGACGGCCCACTGCCATTCTCCCTCGAGACCGGAGATACGCGTTACGGGTCTCAAAAGCATCAATACGTCAATACGGCGAGTATATATATCTATAGGACGCGACTAGACCGAAATCGGTCTCGCGATAGCTCTATCGCGCGACGCGCGCCCCTGCCAGAAAAAGCAACCGCGCGCCCCTACCAAAAGAGGAAAGCGTGCAACGCACGGCTCTCGCTTCGCATGGTATAGCTGGCATGGGCCCGGCTAGGACAGAGCGCTGCGCGCCTCCTTCCCCCCTCCAACCCATCAAATCCGGACAGCCGGCGGCGTCAATCCACACGCAGC]
[+] EMBL AK062672 [TCTCGCCTGCTGCTTCGTTTGTTGGGTTGCCTCGTCGGCGGCGACGGTGGCGCCGGCGGCCGGTGTCGCCGTGACGAGCCTTCCTGGATTCGACGGCCCACTGCCATTCTCCCTCGAGACCGGAGATACGCGTTACGGGTCTCAAAAGCATCAATACGTCAATACGGCGAGTATATATATCTATAGGACGCGACTAGACCGAAATCGGTCTCGCGATAGCTCTATCGCGCGACGCGCGCCCCTGCCAGAAAAAGCAACCGCGCGCCCCTACCAAAAGAGGAAAGCGTGCAACGCACGGCTCTCGCTTCGCATGGTATAGCTGGCATGGGCCCGGCTAGGACAGAGCGCTGCGCGCCTCCTTCCCCCCTCCAACCCATCAAATCCGGACAGCCGGCGGCGTCAATCCACACGCAGC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_8441#1 TCTCGCCTGCTGCTTCGTTTGTTGGGTTGCCTCGTCGGCGGCGACGGTGGCGCCGGCGGC 60
consensus_8441#3 TCTCGCCTGCTGCTTCGTTTGTTGGGTTGCCTCGTCGGCGGCGACGGTGGCGCCGGCGGC 60
consensus_8441#0 TCTCGCCTGCTGCTTCGTTTGTTGGGTTGCCTCGTCGGCGGCGACGGTGGCGCCGGCGGC 60
consensus_8441#2 ----ATACGTAGTACCATA-GTAGAAATACCATGTGCACACCAA----GACTCTCCCTTA 51
* * * * ** * * ** ** * * * * * * *
consensus_8441#1 CGGTGTCGCCGTGACGAGCCTTCCTGGATTCGACGGCCCACTGCCATTCTCCCTCGAGAC 120
consensus_8441#3 CGGTGTCGCCGTGACGAGCCTTCCTGGATTCGACGGCCCACTGCCATTCTCCCTCGAGAC 120
consensus_8441#0 CGGTGTCGCCGTGACGAGCCTTCCTGGATTCGACGGCCCACTGCCATTCTCCCTCGAGAC 120
consensus_8441#2 CAGTTTTATCAT-------TTGCCCATATTTGTAAAACCAC-ATAAGAAGCTTTCTGCAG 103
* ** * * * * ** *** * **** * * ** *
consensus_8441#1 CGGA--TACGTGGAGGTGAACGAGAGTACGGGCGTGCGTCTCTTCTACTACTTTGTCCAG 178
consensus_8441#3 CGGAGATACGCGTTACGGGTCTCAAAAGCATCAATACGTCAATACGGCGAGTATATATAT 180
consensus_8441#0 CGGA--TACGTGGAGGTGAACGAGAGTACGGGCGTGCGTCTCTTCTACTACTTTGTCCAG 178
consensus_8441#2 TAAA--TAAGCAAAATTAGACTTTCTTAGGTCAAGTGCTATCCAAGGAAAATTGGAAAAC 161
* ** * * * * * *
consensus_8441#1 TCAGAGAAGGATCCTGATGTAGACCCACTTTTATTGTGGCTATCAGGTGGGCCTGGCTGT 238
consensus_8441#3 CTATAGGACGCGACTAGACCGAAATCGGTCTCGCGATAGCTCTATCGCGCGACGCGCGCC 240
consensus_8441#0 TCAGAGAAGGATCCTGATGTAGACCCACTTTTATTGTGGCTATCAGGTGGGCCTGGCTGT 238
consensus_8441#2 AGATAAATTGGAATTCAATGGGATGCAGTAATGTTGTATTGTTTTTATGCACTCAACTCT 221
* * * * * * * * * * *
consensus_8441#1 TCTAGTCTCTCTGGCCTAACCCACGAGATAGGACCATTCCAATTCGCCGCAAAACGGTAT 298
consensus_8441#3 CCTG------CCAGAAAAAGCAACCGCGC--GCCCCTACCAA---AAGAGGAAAGCGTGC 289
consensus_8441#0 TCTAGTCTCTCTGGCCTAACCCACGAGATAGGACCATTCCAATTCGCCGCAAAACGGTAT 298
consensus_8441#2 ACAC------TTGAATTCAATAATGTCAT-----CATTAGCAGCAGAAGCAGACTCCAGC 270
* * * * * * *
consensus_8441#1 TACAGTGGAGGATTGCCGAAAATTATCTATCAACCAGAGACTT--GGACTAAGGTGAGCA 356
consensus_8441#3 AACGCACGGCTCTCGCTTCGCATGGTATAGCTGGCATGGGCCC--GGCTAGGACAGAGCG 347
consensus_8441#0 TACAGTGGAGGATTGCCGAAAATTATCTATCAACCAGAGACTT--GGACTAAGGTGAGCA 356
consensus_8441#2 ATGAGCCTAATCATTCCATCTGTCGCTTCATTGTTATGGATCCCGGGGCTCCCGACGTCT 330
* * * * * ** *
consensus_8441#1 ACATAATTTTTGTGGATTCTCCCGTAGGGGCAGGATTCTCATACGCGGCAACACAGGAAG 416
consensus_8441#3 CTGCGCGCCTCCTTCCCCCCTCCA-ACCCATCAAATCCGGACAGCCGGCGGCGTCAA--- 403
consensus_8441#0 ACATAATTTTTGTGGATTCTCCCGTAGGGGCAGGATTCTCATACGCGGCAACACAGGAAG 416
consensus_8441#2 TCACAAAATGGCTCAAGAACATGTAGCATGTTGATGTCCTTTGTGCAATCGTGTATAACT 390
* * *
consensus_8441#1 GCTCCAAGACTAGCGATACCAAGACAGTGAAACAGCTTGTTATTTTCCTCAGAAAG-TGG 475
consensus_8441#3 --TCCACACGCAGC---------------------------------------------- 415
consensus_8441#0 GCTCCAAGACTAGCGATACCAAGACAGTGAAACAGCTTGTTATTTTCCTCAGAAAGGTAA 476
consensus_8441#2 -TTCATAGACTGCTCACATCGAGCATTCCCTGGGGCATTGTATTTCCCTCTACAGGTTTC 449
**
consensus_8441#1 CTTCA--TGATCATCCCCAGTTCTTGCTGAATCCGCTGTATATTGGAGGTGACTCATATA 533
consensus_8441#3 ------------------------------------------------------------
consensus_8441#0 CTCGG--TGCTGACCAATGCCCCAGAATTTCAGATTTTTACACCACCTATCTTGTATGGA 534
consensus_8441#2 CTTAGCATGCTCATAAAGTTCATTGGATATAAGTCCCATGCCATGGAGAAATGGAATTTT 509
consensus_8441#1 GTGGTTATATTGTACCTAC-ACTTGCGCTAGCGATTGATGAAAGCAATGATTCAGGAGAT 592
consensus_8441#3 ------------------------------------------------------------
consensus_8441#0 ATTGGTTTAATATATTTTTTGTTTGCCTTATGGTTTTCTTCGAGAACATCCGCAGGCTTC 594
consensus_8441#2 ACCACCTTCATCAAATTGGCGTTCGGTCCTTGGATTGCCAGCAACGTACCCCTGCG---- 565
consensus_8441#1 AAA--CCAATTTTGAATCTCATGGGGTACGTTGCTGGCAATCCAAGGACCGAACGCCAAT 650
consensus_8441#3 ------------------------------------------------------------
consensus_8441#0 GAATGCCATTTCAGTAACATCCACCATCCGTTACAAAATATTATGTTTTTTTAGGTTGCT 654
consensus_8441#2 -----TCATGTAGACAAGGTAAAGAAATTGGTGGAAGGCAAAAGTTAATTGCAGGCCACA 620
consensus_8441#1 TTGATGAAGGT--------GGTAAAATTCCATTTCTCCATGGCATGGGACTTATATCCAA 702
consensus_8441#3 ------------------------------------------------------------
consensus_8441#0 TAGAAAATACTACAGTTAGGACGAAAGATTTCTTTTCTGTCACTTGAGTTATCAATTTTT 714
consensus_8441#2 TTGGTACTACA-----CATTAGCAAGCAATTTATGTAGACTATTGACGTAATTAAGATTC 675
consensus_8441#1 TGAACTTTATGAGCATGCTAAGGAAACCTGCAGAGGGAAATACAATGCCCCAGGGAACGC 762
consensus_8441#3 ------------------------------------------------------------
consensus_8441#0 AAAGTTTAAATATATATCTTAGATTTCCTTTCCAAACATCTGATTGGTGATATAAAATTG 774
consensus_8441#2 CAAATATAAAATTTCATGATTGATATTTATCTGATAAGATCGATCAG-ACCATGAGATTC 734
consensus_8441#1 TCGATGTGAGCAGTCTATGAAAGTTATACACGATTGCACAAAGGACATCAACATGCTACA 822
consensus_8441#3 ------------------------------------------------------------
consensus_8441#0 GAATCCTAGAGATACTTATATTTTGAAATGGAGAGAGAATGAGAAAGTGCTTGTACGGCA 834
consensus_8441#2 AAAATTGGTTTATCTCCTGAATCATTGCCTGAAAAATATAGACACATGGTCCGTAGTT-- 792
consensus_8441#1 TGTTCTTGAGCCATTTTGTGAAGACGTCGGGAGCCCCGGGATCCATAACAATGAAGCGAC 882
consensus_8441#3 ------------------------------------------------------------
consensus_8441#0 CGTAATTAAGTTGCACTGGTTATTACTACTGAAATTGTAAATAT-TATATTTTAAATAAT 893
consensus_8441#2 ------------------------------------------------------------
consensus_8441#1 AGATGGAATGATTAGGCTCATGCTGGAGTCTGCTTCTGCTGCTAATGATGACATTATTGA 942
consensus_8441#3 ------------------------------------------------------------
consensus_8441#0 ATGTTGAATAAGTTGGCA-ATATTTCGGTGAACGAACACTTGGACTTTTTTTATTTCTGA 952
consensus_8441#2 ------------------------------------------------------------
consensus_8441#1 ATTCAAGTGTAGAAAAGCTTCTTATGTGGTTTTACAAATATGGGCAAATGATAAAACTGT 1002
consensus_8441#3 ------------------------------------------------------------
consensus_8441#0 AGA-AGGAACAATTTACTTTGTTATTATGTTCCAAAAATCAAAATTATTAATTAGAAATA 1011
consensus_8441#2 ------------------------------------------------------------
consensus_8441#1 AAGGGAGAGTCTTGGTGTGCACAAGGGAACAGTTGGAGAGTGGATAAGATGCAATTTCGA 1062
consensus_8441#3 ------------------------------------------------------------
consensus_8441#0 CTTATATAGAATGGATCCTTATGTTTCTGCTGTTACATTGCTGATGTTGGGTCCGCAGCA 1071
consensus_8441#2 ------------------------------------------------------------
consensus_8441#1 TGTAG-ATTACATTGCAGATGTGTATAGTACAGTGGAGTATCATTTGACGCTAATGAGAA 1121
consensus_8441#3 ------------------------------------------------------------
consensus_8441#0 TTTGCTATCATGTAATATAGAAATTTAGAATTAGTGAGTATCAGTAAACCCAGTTTAGAT 1131
consensus_8441#2 ------------------------------------------------------------
consensus_8441#1 AAGGAT----ACCGAGCATTGATATACAGCGGTGATCATGATTGTCAAGTTC--CCTTCA 1175
consensus_8441#3 ------------------------------------------------------------
consensus_8441#0 ATCATTTTAAATTTAATAATACCAAAACATATAAATAAGAGATATCAAGTTGTACTTTGA 1191
consensus_8441#2 ------------------------------------------------------------
consensus_8441#1 CTGGTACACAAGCATGGATTAGATTTCTGAACCTTTCTGTAATTGATGATTGGCGACCAT 1235
consensus_8441#3 ------------------------------------------------------------
consensus_8441#0 TTGTGCCTCGATTATCTTTTACATGGTTTAATAATTCTAAAGCTCATAATTAATAAGTGT 1251
consensus_8441#2 ------------------------------------------------------------
consensus_8441#1 GGTATGCTGCTGGACAAGTTGCCGGATTCACGAGAAGCTATGCGAATAATAACCTGATAT 1295
consensus_8441#3 ------------------------------------------------------------
consensus_8441#0 ATTGAACTGCATTTTGGGTTG--GGGATCAAAATAATAGCCATTAAGGGTTAAAAAATTC 1309
consensus_8441#2 ------------------------------------------------------------
consensus_8441#1 ATGCAACTGTGAAGGGTGCTGGGCACACTGCTCCAGAGTATAAACCTAAGGAGTGTCTCG 1355
consensus_8441#3 ------------------------------------------------------------
consensus_8441#0 CAAAATTGGTAATTAATAAACAATTGAGTGGTACTGGATAAAGAGTTTCAATGGTAGTTT 1369
consensus_8441#2 ------------------------------------------------------------
consensus_8441#1 AGATGTTTGCTAGATGGATTTCAGGCAATACTCTCTGATGTATATTCCTCAAT-CAGATC 1414
consensus_8441#3 ------------------------------------------------------------
consensus_8441#0 TTCAAGGTTTTAAATCATTCCGGAAAATTCGATATAAGTGAGTATTCACATATGTATCNC 1429
consensus_8441#2 ------------------------------------------------------------
consensus_8441#1 AAGTCAACTATGAAAACATGAGTAAATGATAACATCAGAGATATGAAGAAAAACATTTGC 1474
consensus_8441#3 ------------------------------------------------------------
consensus_8441#0 AGTTGGGAGCCCCAAATAATAAAATTCAANGATTTAATAGTTCCACGGGGAAATAATTAA 1489
consensus_8441#2 ------------------------------------------------------------
consensus_8441#1 TGCATGTAATATTTTGGAAAACCTTAAGAACTCTCACTAGTACATAGATATCTATGACGG 1534
consensus_8441#3 ------------------------------------------------------------
consensus_8441#0 TCACTAATTTGTTTTCGCCAAAGGTATATTTATTTAAAAAAAAATTCTGATTCCGGTCTA 1549
consensus_8441#2 ------------------------------------------------------------
consensus_8441#1 AGACCAGTGGTCCATAAAAGGGGCATTCATCTGTGTTGGGCCGAAAATAATCCCGTTGAA 1594
consensus_8441#3 ------------------------------------------------------------
consensus_8441#0 TAGTAAATAATACAATCCAACTACCTAAGGGCCTTAATTCCAAATTACCTACTAGTGGAA 1609
consensus_8441#2 ------------------------------------------------------------
consensus_8441#1 GATTGGGCTTCACGGCCATGCCCGTCACCGTTGTCCCCTCATCGGTGATGGGATTCAGT- 1653
consensus_8441#3 ------------------------------------------------------------
consensus_8441#0 TATAATATAAAAGATGTATTCGGGTGTTGGTTATTCCCTCGTGATTATTCAATATGATGC 1669
consensus_8441#2 ------------------------------------------------------------
consensus_8441#1 --TGTGGCCCGACACAGGTCATCTATGATGGGCTTCACGCATGCAATCCAGCATACATGA 1711
consensus_8441#3 ------------------------------------------------------------
consensus_8441#0 CATTTGAAATGAAATATGTGTTAACTTAGCGATATATAAAATATAATTAAGAAAAGATTC 1729
consensus_8441#2 ------------------------------------------------------------
consensus_8441#1 AGATATATTTTCTTCCTATATATGTACAACTCACTTCGTGTCATTTACAGGTACAAACCA 1771
consensus_8441#3 ------------------------------------------------------------
consensus_8441#0 ACTTACTGCCCGTTTAAAGATGCTGCCTGGACAGGT-GGAAAATATTTAAGTGCATGCTG 1788
consensus_8441#2 ------------------------------------------------------------
consensus_8441#1 TTGGATCAGCATGCATCTGTACCAAACAAAAATTTGATCAATTATCCTTTCCTATACAAA 1831
consensus_8441#3 ------------------------------------------------------------
consensus_8441#0 AAGATTGAGCGAGGTTGATTTGTAATCCCTCCGTCCACTGACTAATGCGCGCTCTTCAAA 1848
consensus_8441#2 ------------------------------------------------------------
consensus_8441#1 GGCTAAAAAATATAGCAAAGA--------------------------------------- 1852
consensus_8441#3 ------------------------------------------------------------
consensus_8441#0 ACTAGTATTTGACTTTAAATTTATTATATATTATAAACAAAAGTTGTAAATCCAAAGGTT 1908
consensus_8441#2 ------------------------------------------------------------
consensus_8441#1 ------------------------------------------------------------
consensus_8441#3 ------------------------------------------------------------
consensus_8441#0 AATCTAATCATATTATTTTCATAAAAAAATTTAATTCCTAATAAAATAATTATTGGTCCA 1968
consensus_8441#2 ------------------------------------------------------------
consensus_8441#1 ------------------------------------------------------------
consensus_8441#3 ------------------------------------------------------------
consensus_8441#0 ACATTTAGGTTGAGTTCGTTCATTTACTTTCCCACTCATTTCTCTTTTTCCATGTGCACA 2028
consensus_8441#2 ------------------------------------------------------------
consensus_8441#1 ------------------------------------------------------------
consensus_8441#3 ------------------------------------------------------------
consensus_8441#0 CTTTTCAAACTACTAAACAGTGTATTTTTTGCAAAAAAAAAATTATATAGTAAAGTTTCT 2088
consensus_8441#2 ------------------------------------------------------------
consensus_8441#1 ------------------------------------------------------------
consensus_8441#3 ------------------------------------------------------------
consensus_8441#0 TTGAAAATCATATTAATCTATTTTTTAAAAAATGATAATACTTAATTAATAATGTGCTAA 2148
consensus_8441#2 ------------------------------------------------------------
consensus_8441#1 ------------------------------------------------------------
consensus_8441#3 ------------------------------------------------------------
consensus_8441#0 TAAGTAACTATGTTTTGCGTAAGTGAAAGGTTAGTTTCAACCTCAATAAAAGAACTCAGT 2208
consensus_8441#2 ------------------------------------------------------------
consensus_8441#1 ------------------------------------------------------------
consensus_8441#3 ------------------------------------------------------------
consensus_8441#0 CTTAAAATTTGAATCTTGTGAACGCCATATTCAGTGGGACAAAGAGAGTACTATTATGAT 2268
consensus_8441#2 ------------------------------------------------------------
consensus_8441#1 ----------------------------------------------------
consensus_8441#3 ----------------------------------------------------
consensus_8441#0 TTTGTAAGCTTCTAATTAATGAAACGGGAAGTTTAGTCATTCGTGCTTCTTC 2320
consensus_8441#2 ----------------------------------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||