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Oryza sativa
cluster # 8487 cluster # 8487       Sequences # 5       consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8487#0 length = 2291 sequences # 2  
 consensus_8487#1 length = 969 sequences # 2  
consensus_8487#2 length = 789 sequences # 1  
consensusID : consensus_8487#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 2291
fasta sequence 
                              [CCTCTTCTCCCTCAGGCCGCCGCCGCGCAGGCCCGACCGGCGCCCGGCCGCCGCCCAGCCGGGGCACCGTGCCGCCGTCGCCTCGGCCCGGTCGTCGTCGTCCTGATCCTCGTCGTCGGTGCGCTGTTCCTCATCCTCGGCCCGACCGGCTCCTCCAGCTTCACCATGCCGCGGATCCGCACGGAGTTCAACGAACCCGTCCACGTTGCGGTGGCGGCTCCGCCTCCGCCGCCGACGCAGATGCAAGCCGGCGTCAACACGAGCGGCGAGGAGGACAGTGGCCTCCTGCCGACAACCTCCGCCTCCGCCCTGACGGCGCGCTCGTCGTGCTCCACGTCCAGCCGCCGCCGAGCATCGCCGCCGGGCTCAACCCCGGACCCATCCCCTTCGGCGGCCCGAGTAAGCAATCTCTTGCACTCGTCTTCGCGGAAATCAGGACGGACACTTGGTCCTGTGGCTGTGAGCTGTGGTTCTTGCGAATTTTTTCGGTCGAGCTGATGGCTTCCTGGATGTGCCGCGCGGCTGATCAGGCGAGGTCGCTGGCATCACTAGTAGCAAGCATCAATAGTCCTCGCCGCCGTCGTTGTGCTGGTCCTGGCATAACTAGTAGCAAGCATTACTAGTAGCAAGCATCAACAGTCATGAACACCAGTAGCAAGCATCAATAGTCCTCGCCGCCGTAGTTGTGTTGGTCGTCGTCGTCGTTGTCGCAGCGCTGCCGCCGCCGCTGTCGTCGCAGCGCCGCCCCCGTCTTCGTCGTCGTCGTCGTCGCAGCGTTGTTGCCGCCGTCTTCGTCGCGCAGCGATGCCGCCACCGTCGTCGTCGCAGCAATGCCGCCGCCGCCGTCGTCGCAGCGCTGCCCCCGTTGTCATCGTCGTCGTCGCAGCGCCCGTCGCTGTCGCAGTGCCGCCGTCTTCTCCCCTCCGCTCCTTTGCTGCTGCTGCTGCTGCTGCTGCATCTGAGGGGAGAGAGGAGAGTGCTAGGAGAGAGCATATTGGACCAAAGTGCAACTAAGTCATTTTACAACGGAATGGTGTGAAGGATGCGATAAAGTTTAACTATGGCAGAGAGATGCTTGAATATTTTAGTGATACAGAGACAAGCACCATCTTTCTTAATGGCATTTAGGGAAAAACCTCCCAAGGGAGAGGGCACAGGCGGCGGCGACGGTGGCAGCATCCTCCAATGGCGGGCAACGACCAACGGGTGATATTGGTTGGAGACGGCGGCGCTCGCGGGCCGCCGCTGTCCAATGCGCCGCGCCATGGAGATCCCCACCACCGGCCGACCTCATCCTCGCCATCTCTCTCCGCTGCCTGGTTGCCAGACCTAGCCAGCCTCCCCTCGGCTCGTCAGCCCCCTGCGGCCCCGCCTCGACGCCCCTCCTCTGCCGGTCGGCTTCAGGCTCGACGACGCCCCAAGATCCAGTCTCCACGAGCTCTGCCCGAGAGTGTCAGACCTTCAGCGTCGCGTCTGTACATCCGCCGGGCGCCGGCTGAGAGCGTCCATCCCAAATCATTTTTGCTGTCGTTATTGTTCAACTGGAATTGTTCTCATGATTTTGTTGCCAGCCTAGGTGAAATAGAGCAATGCTACACGTACTAAATTTTTCTTACTAAACTTTTACTAACAATCATCTCAACCGTTTAATTTAAATATATGGAAGTTACAAAAAATCTAGATGCACTCATAGCATGACACATCANGTGTTAGTAAGAATTTAGTAAAAAAAAGTTAGTACGTATAGCCTTTTCCTTTCAACATTGGGATCTCGATATGATTTTTGTCGCATTTGCTTATGAACCTATTTGTTTTTCTAAAAATAGCAATCTTCTGCTTATTGGCACTGCCGTTTTCACATTTGTAACCTTTCCATTTCCTCTGCTACTCTAAAAGCACAGGTGTCGTCCTTCCTTTCCCTCCCCCAATCCCACGTATGAAAAACCACTCCAAAAAAAATCCAGTGCAACTAAAAAACTAGCCAACAGACAAAAAAAAAAACACATTCCCCAGATCCCATTGCAAGGGTTGAAAAGATTGAGCCATGTTCCCATATCCCGTTGCAATGCACGGGCACATGACTAGTAATGATAAAAGCTTACCTCTTATCCATCATGTGTTCTCTGGAGAAATGCATAATTGAAACTGATGAGTTTGCACAGAGCGACTTGCATCATTAATTGTACTATGTGGTTCCATCTGGGAATTATTGTCTGATGTAAATTGTATTGGTGTTTCCCATATTCGTACTAATCATCAAAACAATCTGTAATATTAGCTTTTTCCGTTAT]

[+] EMBL AK111448             [CCTCTTCTCCCTCAGGCCGCCGCCGCGCAGGCCCGACCGGCGCCCGGCCGCCGCCCAGCCGGGGCACCGTGCCGCCGTCGCCTCGGCCCGGTCGTCGTCGTCCTGATCCTCGTCGTCGGTGCGCTGTTCCTCATCCTCGGCCCGACCGGCTCCTCCAGCTTCACCATGCCGCGGATCCGCACGGAGTTCAACGAACCCGTCCACGTTGCGGTGGCGGCTCCGCCTCCGCCGCCGACGCAGATGCAAGCCGGCGTCAACACGAGCGGCGAGGAGGACAGTGGCCTCCTGCCGACAACCTCCGCCTCCGCCCTGACGGCGCGCTCGTCGTGCTCCACGTCCAGCCGCCGCCGAGCATCGCCGCCGGGCTCAACCCCGGACCCATCCCCTTCGGCGGCCCGAGTAAGCAATCTCTTGCACTCGTCTTCGCGGAAATCAGGACGGACACTTGGTCCTGTGGCTGTGAGCTGTGGTTCTTGCGAATTTTTTCGGTCGAGCTGATGGCTTCCTGGATGTGCCGCGCGGCTGATCAGGCGAGGTCGCTGGCATCACTAGTAGCAAGCATCAATAGTCCTCGCCGCCGTCGTTGTGCTGGTCCTGGCATAACTAGTAGCAAGCATTACTAGTAGCAAGCATCAACAGTCATGAACACCAGTAGCAAGCATCAATAGTCCTCGCCGCCGTAGTTGTGTTGGTCGTCGTCGTCGTTGTCGCAGCGCTGCCGCCGCCGCTGTCGTCGCAGCGCCGCCCCCGTCTTCGTCGTCGTCGTCGTCGCAGCGTTGTTGCCGCCGTCTTCGTCGCGCAGCGATGCCGCCACCGTCGTCGTCGCAGCAATGCCGCCGCCGCCGTCGTCGCAGCGCTGCCCCCGTTGTCATCGTCGTCGTCGCAGCGCCCGTCGCTGTCGCAGTGCCGCCGTCTTCTCCCCTCCGCTCCTTTGCTGCTGCTGCTGCTGCTGCTGCATCTGAGGGGAGAGAGGAGAGTGCTAGGAGAGAGCATATTGGACCAAAGTGCAACTAAGTCATTTTACAACGGAATGGTGTGAAGGATGCGATAAAGTTTAACTATGGCAGAGAGATGCTTGAATATTTTAGTGATACAGAGACAAGCACCATCTTTCTTAATGGCATTTAGGGAAAAACCTCCCAAGGGAGAGGGCACAGGCGGCGGCGACGGTGGCAGCATCCTCCAATGGCGGGCAACGACCAACGGGTGATATTGGTTGGAGACGGCGGCGCTCGCGGGCCGCCGCTGTCCAATGCGCCGCGCCATGGAGATCCCCACCACCGGCCGACCTCATCCTCGCCATCTCTCTCCGCTGCCTGGTTGCCAGACCTAGCCAGCCTCCCCTCGGCTCGTCAGCCCCCTGCGGCCCCGCCTCGACGCCCCTCCTCTGCCGGTCGGCTTCAGGCTCGACGACGCCCCAAGATCCAGTCTCCACGAGCTCTGCCCGAGAGTGTCAGACCTTCAGCGTCGCGTCTGTACATCCGCCGGGCGCCGGCTGAGAGCGTCCATCCCAAATCATTTTTGCTGTCGTTATTGTTCAACTGGAATTGTTCTCATGATTTTGTTGCCAGCCTAGGTGAAATAGAGCAATGCTACACGTACTAAATTTTTCTTACTAAACTTTTACTAACAATCATCTCAACCGTTTAATTTAAATATA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CA766194             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  GCAATGCTACACGTACTAAATTTTTCTTACTAAACTTTTACTAACAATCATCTGAACCGTTTGATTTAAGTAGATGGAAGTTACAAAAAATCTAGATGCACTCATAGCATGACACATCANGTGTTAGTAAGAATTTAGTAAAAAAAAGTTAGTACGTATAGCCTTTTCCTTTCAACATTGGGATCTCGATATGATTTTTGTCGCATTTGCTTATGAACCTATTTGTTTTTCTAAAAATAGCAATCTTCTGCTTATTGGCACTGCCGTTTTCACATTTGTAACCTTTCCATTTCCTCTGCTACTCTAAAAGCACAGGTGTCGTCCTTCCTTTCCCTCCCCCAATCCCACGTATGAAAAACCACTCCAAAAAAAATCCAGTGCAACTAAAAAACTAGCCAACAGACAAAAAAAAAAACACATTCCCCAGATCCCATTGCAAGGGTTGAAAAGATTGAGCCATGTTCCCATATCCCGTTGCAATGCACGGGCACATGACTAGTAATGATAAAAGCTTACCTCTTATCCATCATGTGTTCTCTGGAGAAATGCATAATTGAAACTGATGAGTTTGCACAGAGCGACTTGCATCATTAATTGTACTATGTGGTTCCATCTGGGAATTATTGTCTGATGTAAATTGTATTGGTGTTTCCCATATTCGTACTAATCATCAAAACAATCTGTAATATTAGCTTTTTCCGTTAT]




>consensus_8487#0
CCTCTTCTCCCTCAGGCCGCCGCCGCGCAGGCCCGACCGGCGCCCGGCCGCCGCCCAGCC
GGGGCACCGTGCCGCCGTCGCCTCGGCCCGGTCGTCGTCGTCCTGATCCTCGTCGTCGGT
GCGCTGTTCCTCATCCTCGGCCCGACCGGCTCCTCCAGCTTCACCATGCCGCGGATCCGC
ACGGAGTTCAACGAACCCGTCCACGTTGCGGTGGCGGCTCCGCCTCCGCCGCCGACGCAG
ATGCAAGCCGGCGTCAACACGAGCGGCGAGGAGGACAGTGGCCTCCTGCCGACAACCTCC
GCCTCCGCCCTGACGGCGCGCTCGTCGTGCTCCACGTCCAGCCGCCGCCGAGCATCGCCG
CCGGGCTCAACCCCGGACCCATCCCCTTCGGCGGCCCGAGTAAGCAATCTCTTGCACTCG
TCTTCGCGGAAATCAGGACGGACACTTGGTCCTGTGGCTGTGAGCTGTGGTTCTTGCGAA
TTTTTTCGGTCGAGCTGATGGCTTCCTGGATGTGCCGCGCGGCTGATCAGGCGAGGTCGC
TGGCATCACTAGTAGCAAGCATCAATAGTCCTCGCCGCCGTCGTTGTGCTGGTCCTGGCA
TAACTAGTAGCAAGCATTACTAGTAGCAAGCATCAACAGTCATGAACACCAGTAGCAAGC
ATCAATAGTCCTCGCCGCCGTAGTTGTGTTGGTCGTCGTCGTCGTTGTCGCAGCGCTGCC
GCCGCCGCTGTCGTCGCAGCGCCGCCCCCGTCTTCGTCGTCGTCGTCGTCGCAGCGTTGT
TGCCGCCGTCTTCGTCGCGCAGCGATGCCGCCACCGTCGTCGTCGCAGCAATGCCGCCGC
CGCCGTCGTCGCAGCGCTGCCCCCGTTGTCATCGTCGTCGTCGCAGCGCCCGTCGCTGTC
GCAGTGCCGCCGTCTTCTCCCCTCCGCTCCTTTGCTGCTGCTGCTGCTGCTGCTGCATCT
GAGGGGAGAGAGGAGAGTGCTAGGAGAGAGCATATTGGACCAAAGTGCAACTAAGTCATT
TTACAACGGAATGGTGTGAAGGATGCGATAAAGTTTAACTATGGCAGAGAGATGCTTGAA
TATTTTAGTGATACAGAGACAAGCACCATCTTTCTTAATGGCATTTAGGGAAAAACCTCC
CAAGGGAGAGGGCACAGGCGGCGGCGACGGTGGCAGCATCCTCCAATGGCGGGCAACGAC
CAACGGGTGATATTGGTTGGAGACGGCGGCGCTCGCGGGCCGCCGCTGTCCAATGCGCCG
CGCCATGGAGATCCCCACCACCGGCCGACCTCATCCTCGCCATCTCTCTCCGCTGCCTGG
TTGCCAGACCTAGCCAGCCTCCCCTCGGCTCGTCAGCCCCCTGCGGCCCCGCCTCGACGC
CCCTCCTCTGCCGGTCGGCTTCAGGCTCGACGACGCCCCAAGATCCAGTCTCCACGAGCT
CTGCCCGAGAGTGTCAGACCTTCAGCGTCGCGTCTGTACATCCGCCGGGCGCCGGCTGAG
AGCGTCCATCCCAAATCATTTTTGCTGTCGTTATTGTTCAACTGGAATTGTTCTCATGAT
TTTGTTGCCAGCCTAGGTGAAATAGAGCAATGCTACACGTACTAAATTTTTCTTACTAAA
CTTTTACTAACAATCATCTCAACCGTTTAATTTAAATATATGGAAGTTACAAAAAATCTA
GATGCACTCATAGCATGACACATCANGTGTTAGTAAGAATTTAGTAAAAAAAAGTTAGTA
CGTATAGCCTTTTCCTTTCAACATTGGGATCTCGATATGATTTTTGTCGCATTTGCTTAT
GAACCTATTTGTTTTTCTAAAAATAGCAATCTTCTGCTTATTGGCACTGCCGTTTTCACA
TTTGTAACCTTTCCATTTCCTCTGCTACTCTAAAAGCACAGGTGTCGTCCTTCCTTTCCC
TCCCCCAATCCCACGTATGAAAAACCACTCCAAAAAAAATCCAGTGCAACTAAAAAACTA
GCCAACAGACAAAAAAAAAAACACATTCCCCAGATCCCATTGCAAGGGTTGAAAAGATTG
AGCCATGTTCCCATATCCCGTTGCAATGCACGGGCACATGACTAGTAATGATAAAAGCTT
ACCTCTTATCCATCATGTGTTCTCTGGAGAAATGCATAATTGAAACTGATGAGTTTGCAC
AGAGCGACTTGCATCATTAATTGTACTATGTGGTTCCATCTGGGAATTATTGTCTGATGT
AAATTGTATTGGTGTTTCCCATATTCGTACTAATCATCAAAACAATCTGTAATATTAGCT
TTTTCCGTTAT

consensusID : consensus_8487#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 969
fasta sequence 
                              [CGGAAGGCTGCGTAGTCATCTCGTTTGATCGAGCTGAGCACGAGAGGAGAAGAAGCAAGCACGCGACGCAACCATCGCCGCGCCTCCGCGACCCCTGACTGCGCGAGGAGGCGAGCTCGGGCCGGAGCTGAGGGAGCTCGCCATGGCGACCGGCAACCTGGCCAGCGTGGTGGTGGCGGTGGACGGGAGCGAGGAGAGCATGAACGCGCTGCGGTGGGCGCTCGACAACCTCCGCCTCCGCCCCGACGGCGCGCTCGTCGTGCTCCACGTCCAGCCGCCGCCGAGCATCGCCGCCGGGCTCAACCCCGGACCCATCCCCTTCGGCGGCCCGAGCGAGGTGGAGGTGCCGGCGTTCACGCAGGCGATCGAGGCGCACCAGCGGCGGATCACGCAGGCTATCCTGGATCACGCGCTCAAGATTTGCTCCGAGAAGAATGTGGAGGTGAAGACGGATGTGGTCGTTGGGGATCCTAAGGAGAAGATCTGCGAGGTGACGGCAAATCTCAAGGCCGATCTGCTCGTCATGGGGTGCCGTGCTTTTGGCCCCCTCAAGAGAATGTTCTTAGGAAGTGTGAGCAACTACTGCATCAACAATGTGGTCTGTCCAGTTGTTGTAATCAAAGGCACTTGAGCCATCTTCGATCAGTATTCTTTGCTGCACTTTAAGTCAAGCCTCTGAGGTTGCTACTGCGCTATCATCCGTAATGGTACTGCATATTTCACATTTGGAGACTAGTTTGTTGTGCATCTTTTTGTCACATGGTGGTATTTACGGATGATAGTTGTCGCGTGCATTTGAGCAAGG-AAATATGTATTGATTGTTCAATTGTAGAAATAAATGTGCCATGTAGCACATTGTTTTGTATATTCTTGTATTTGTTCTGTGCTAAACATCACAAACTTGGCAGAAGTGAGTTCCCTTTTGTATGAATCCTGTCATACTTTTATGTTCCTTGAGATGTCCAAAGT]

[+] EMBL AK062958             [CGGAAGGCTGCGTAGTCATCTCGTTTGATCGAGCTGAGCACGAGAGGAGAAGAAGCAAGCACGCGACGCAACCATCGCCGCGCCTCCGCGACCCCTGACTGCGCGAGGAGGCGAGCTCGGGCCGGAGCTGAGGGAGCTCGCCATGGCGACCGGCAACCTGGCCAGCGTGGTGGTGGCGGTGGACGGGAGCGAGGAGAGCATGAACGCGCTGCGGTGGGCGCTCGACAACCTCCGCCTCCGCCCCGACGGCGCGCTCGTCGTGCTCCACGTCCAGCCGCCGCCGAGCATCGCCGCCGGGCTCAACCCCGGACCCATCCCCTTCGGCGGCCCGAGCGAGGTGGAGGTGCCGGCGTTCACGCAGGCGATCGAGGCGCACCAGCGGCGGATCACGCAGGCTATCCTGGATCACGCGCTCAAGATTTGCTCCGAGAAGAATGTGGAGGTGAAGACGGATGTGGTCGTTGGGGATCCTAAGGAGAAGATCTGCGAGGTGACGGCAAATCTCAAGGCCGATCTGCTCGTCATGGGGTGCCGTGCTTTTGGCCCCCTCAAGAGAATGTTCTTAGGAAGTGTGAGCAACTACTGCATCAACAATGTGGTCTGTCCAGTTGTTGTAATCAAAGGCACTTGAGCCATCTTCGATCAGTATTCTTTGCTGCACTTTAAGTCAAGCCTCTGAGGTTGCTACTGCGCTATCATCCGTAATGGTACTGCATATTTCACATTTGGAGACTAGTTTGTTGTGCATCTTTTTGTCACATGGTGGTATTTACGGATGATAGTTGTCGCGTGCATTTGAGCAAGG AAATATGTATTGATTGTTCAATTGTAGAAATAAATGTGCCATGTAGCACATTGTTTTGTATATTCTTGTATTTGTTCTGTGCTAAACATCACAAACTTGGCAGAAGTGAGTTCCCTTTTGTATGAATCCTGTCATACTTTTATGTTCCTTGAGATGTCCAAAGT]
[+] EMBL OSR06591A            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   CTGCGAGGTGACGGCAAATCTCAAGGCCGATCTGCTCGTCATGGGGTGCCGTGCTTTTGGCCCCCTCAAGAGAATGTTCTTAGGAAGTGTGAGCAACTACTGCATCAACAATGTGGTCTGTCCAGTTGTTGTAATCAAAGGCACTTGAGCCATCTTCGATCAGTATTCTTTGCTGCACTTTAAGTCAAGCCTCTGAGGTTGCTACTGCGCTATCATCCGTAATGGTACTGCATATTTCACATTTGGAGACTAGTTTGTTGTGCATCTTTTTGTCACATGGTGGTATTTACGGATGATAGTTGTCGCGTGCATTTGAGCAAGGNAAATATGTATTGATTGTTCAATTGTAGAAATAAATGTGCCATGTAG                                                                                                                      ]




>consensus_8487#1
CGGAAGGCTGCGTAGTCATCTCGTTTGATCGAGCTGAGCACGAGAGGAGAAGAAGCAAGC
ACGCGACGCAACCATCGCCGCGCCTCCGCGACCCCTGACTGCGCGAGGAGGCGAGCTCGG
GCCGGAGCTGAGGGAGCTCGCCATGGCGACCGGCAACCTGGCCAGCGTGGTGGTGGCGGT
GGACGGGAGCGAGGAGAGCATGAACGCGCTGCGGTGGGCGCTCGACAACCTCCGCCTCCG
CCCCGACGGCGCGCTCGTCGTGCTCCACGTCCAGCCGCCGCCGAGCATCGCCGCCGGGCT
CAACCCCGGACCCATCCCCTTCGGCGGCCCGAGCGAGGTGGAGGTGCCGGCGTTCACGCA
GGCGATCGAGGCGCACCAGCGGCGGATCACGCAGGCTATCCTGGATCACGCGCTCAAGAT
TTGCTCCGAGAAGAATGTGGAGGTGAAGACGGATGTGGTCGTTGGGGATCCTAAGGAGAA
GATCTGCGAGGTGACGGCAAATCTCAAGGCCGATCTGCTCGTCATGGGGTGCCGTGCTTT
TGGCCCCCTCAAGAGAATGTTCTTAGGAAGTGTGAGCAACTACTGCATCAACAATGTGGT
CTGTCCAGTTGTTGTAATCAAAGGCACTTGAGCCATCTTCGATCAGTATTCTTTGCTGCA
CTTTAAGTCAAGCCTCTGAGGTTGCTACTGCGCTATCATCCGTAATGGTACTGCATATTT
CACATTTGGAGACTAGTTTGTTGTGCATCTTTTTGTCACATGGTGGTATTTACGGATGAT
AGTTGTCGCGTGCATTTGAGCAAGGAAATATGTATTGATTGTTCAATTGTAGAAATAAAT
GTGCCATGTAGCACATTGTTTTGTATATTCTTGTATTTGTTCTGTGCTAAACATCACAAA
CTTGGCAGAAGTGAGTTCCCTTTTGTATGAATCCTGTCATACTTTTATGTTCCTTGAGAT
GTCCAAAGT

consensusID : consensus_8487#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 789
fasta sequence 
                              [TTTGTGAAGTGCACACCACATCAGATTGAACTAACTAATTCAATTAATTGCCAGGTAGGTTCCCATCTGGCATAAGCATACATCAGAAAAATGAAGCTTTCATAACAATGAAGGCAAACTAGTTTAAGTTAACAAGACAGTGATAGTTTTCAGCTGTTGAAAGAAAATATTTATAGCAATTTAGCAATTCTAACTATGGATCACACTAGACAAGAGATTAGAATGAGATGGATAAACAAAAACCATTTATATCTTGGTTTAAGAACCCCAACTTGTGTAGATCAATTTTTAGCACGAGCACTGCTACACATACTAAATTTTTCTTACTAAACTTTTACTAACAATCATCTCAACCATTTGATTTTAGTAGATGGAAGTTATAAAAAATTTAGACGCACTCATAGCATGACATATCAGTGTTAGTAATAAGAATTTAGTAAGAAAAAGTTAGTATGCATAGCCTTTTCCTTATTAGTACCCTACAATTTGGTGCTAATCCCACTTATTAAGCATGTGCAATGCAATTTAATTATTTAGATTTAAATGTTTAAATGCCAAGATATCCTGCCAAATCCCAGATGGAGAATCTACGACGGAATTTTGGATCAAAGTCACTATCACTATATGGATGCATGATAATTTTTGCAGTTGAATCCTGAGCTGGGATAAGACATGCCAGAACTTGACGGAATACAAACCCGATCCCAAACAGTTTTGTGGGGCCAAATTGAAGGGACACACCCTCCAGAGCTAAACTAAATTAAATGCATGTTTCAAGACAGAACATCT]

[-] EMBL CB646455             [TTTGTGAAGTGCACACCACATCAGATTGAACTAACTAATTCAATTAATTGCCAGGTAGGTTCCCATCTGGCATAAGCATACATCAGAAAAATGAAGCTTTCATAACAATGAAGGCAAACTAGTTTAAGTTAACAAGACAGTGATAGTTTTCAGCTGTTGAAAGAAAATATTTATAGCAATTTAGCAATTCTAACTATGGATCACACTAGACAAGAGATTAGAATGAGATGGATAAACAAAAACCATTTATATCTTGGTTTAAGAACCCCAACTTGTGTAGATCAATTTTTAGCACGAGCACTGCTACACATACTAAATTTTTCTTACTAAACTTTTACTAACAATCATCTCAACCATTTGATTTTAGTAGATGGAAGTTATAAAAAATTTAGACGCACTCATAGCATGACATATCAGTGTTAGTAATAAGAATTTAGTAAGAAAAAGTTAGTATGCATAGCCTTTTCCTTATTAGTACCCTACAATTTGGTGCTAATCCCACTTATTAAGCATGTGCAATGCAATTTAATTATTTAGATTTAAATGTTTAAATGCCAAGATATCCTGCCAAATCCCAGATGGAGAATCTACGACGGAATTTTGGATCAAAGTCACTATCACTATATGGATGCATGATAATTTTTGCAGTTGAATCCTGAGCTGGGATAAGACATGCCAGAACTTGACGGAATACAAACCCGATCCCAAACAGTTTTGTGGGGCCAAATTGAAGGGACACACCCTCCAGAGCTAAACTAAATTAAATGCATGTTTCAAGACAGAACATCT]




>consensus_8487#2
TTTGTGAAGTGCACACCACATCAGATTGAACTAACTAATTCAATTAATTGCCAGGTAGGT
TCCCATCTGGCATAAGCATACATCAGAAAAATGAAGCTTTCATAACAATGAAGGCAAACT
AGTTTAAGTTAACAAGACAGTGATAGTTTTCAGCTGTTGAAAGAAAATATTTATAGCAAT
TTAGCAATTCTAACTATGGATCACACTAGACAAGAGATTAGAATGAGATGGATAAACAAA
AACCATTTATATCTTGGTTTAAGAACCCCAACTTGTGTAGATCAATTTTTAGCACGAGCA
CTGCTACACATACTAAATTTTTCTTACTAAACTTTTACTAACAATCATCTCAACCATTTG
ATTTTAGTAGATGGAAGTTATAAAAAATTTAGACGCACTCATAGCATGACATATCAGTGT
TAGTAATAAGAATTTAGTAAGAAAAAGTTAGTATGCATAGCCTTTTCCTTATTAGTACCC
TACAATTTGGTGCTAATCCCACTTATTAAGCATGTGCAATGCAATTTAATTATTTAGATT
TAAATGTTTAAATGCCAAGATATCCTGCCAAATCCCAGATGGAGAATCTACGACGGAATT
TTGGATCAAAGTCACTATCACTATATGGATGCATGATAATTTTTGCAGTTGAATCCTGAG
CTGGGATAAGACATGCCAGAACTTGACGGAATACAAACCCGATCCCAAACAGTTTTGTGG
GGCCAAATTGAAGGGACACACCCTCCAGAGCTAAACTAAATTAAATGCATGTTTCAAGAC
AGAACATCT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8487#0      CCTCTTCTCCCTCAGGCCGCCGCCGCGCAGGCCCGACCGGCGCCCGGCCGCCGCCCAGCC 60
consensus_8487#2      ------------------------------------------------------------
consensus_8487#1      ------------------------------------------------------------
                                                                                  

consensus_8487#0      GGGGCACCGTGCCGCCGTCGCCTCGGCCCGGTCGTCGTCGTCCTGATCCTCGTCGTCGGT 120
consensus_8487#2      ------------------------------------------------------------
consensus_8487#1      ------------------------------------------------------------
                                                                                  

consensus_8487#0      GCGCTGTTCCTCATCCTCGGCCCGACCGGCTCCTCCAGCTTCACCATGCCGCGGATCCGC 180
consensus_8487#2      ------------------------------------------------------------
consensus_8487#1      ------------------------------------------------------------
                                                                                  

consensus_8487#0      ACGGAGTTCAACGAACCCGTCCACGTTGCGGTGGCGGCTCCGCCTCCGCCGCCGACGCAG 240
consensus_8487#2      ------------------------------------------------------------
consensus_8487#1      ------------------------------------------------------------
                                                                                  

consensus_8487#0      ATGCAAGCCGGCGTCAACACGAGCGGCGAGGAGGACAGTGGCCTCCTGCCGACAACCTCC 300
consensus_8487#2      ------------------------------------------------------------
consensus_8487#1      ------------------------------------------------------------
                                                                                  

consensus_8487#0      GCCTCCGCCCTGACGGCGCGCTCGTCGTGCTCCACGTCCAGCCGCCGCCGAGCATCGCCG 360
consensus_8487#2      ------------------------------------------------------------
consensus_8487#1      ------------------------------------------------------------
                                                                                  

consensus_8487#0      CCGGGCTCAACCCCGGACCCATCCCCTTCGGCGGCCCGAGTAAGCAATCTCTTGCACTCG 420
consensus_8487#2      ------------------------------------------------------------
consensus_8487#1      ------------------------------------------------------------
                                                                                  

consensus_8487#0      TCTTCGCGGAAATCAGGACGGACACTTGGTCCTGTGGCTGTGAGCTGTGGTTCTTGCGAA 480
consensus_8487#2      ------------------------------------------------------------
consensus_8487#1      ------------------------------------------------------------
                                                                                  

consensus_8487#0      TTTTTTCGGTCGAGCTGATGGCTTCCTGGATGTGCCGCGCGGCTGATCAGGCGAGGTCGC 540
consensus_8487#2      ------------------------------------------------------------
consensus_8487#1      ------------------------------------------------------------
                                                                                  

consensus_8487#0      TGGCATCACTAGTAGCAAGCATCAATAGTCCTCGCCGCCGTCGTTGTGCTGGTCCTGGCA 600
consensus_8487#2      ------------------------------------------------------------
consensus_8487#1      ------------------------------------------------------------
                                                                                  

consensus_8487#0      TAACTAGTAGCAAGCATTACTAGTAGCAAGCATCAACAGTCATGAACACCAGTAGCAAGC 660
consensus_8487#2      ------------------------------------------------------------
consensus_8487#1      ------------------------------------------------------------
                                                                                  

consensus_8487#0      ATCAATAGTCCTCGCCGCCGTAGTTGTGTTGGTCGTCGTCGTCGTTGTCGCAGCGCTGCC 720
consensus_8487#2      ------------------------------------------------------------
consensus_8487#1      ------------------------------------------------------------
                                                                                  

consensus_8487#0      GCCGCCGCTGTCGTCGCAGCGCCGCCCCCGTCTTCGTCGTCGTCGTCGTCGCAGCGTTGT 780
consensus_8487#2      ------------------------------------------------------------
consensus_8487#1      ------------------------------------------------------------
                                                                                  

consensus_8487#0      TGCCGCCGTCTTCGTCGCGCAGCGATGCCGCCACCGTCGTCGTCGCAGCAATGCCGCCGC 840
consensus_8487#2      ------------------------------------------------------------
consensus_8487#1      ------------------------------------------------------------
                                                                                  

consensus_8487#0      CGCCGTCGTCGCAGCGCTGCCCCCGTTGTCATCGTCGTCGTCGCAGCGCCCGTCGCTGTC 900
consensus_8487#2      ------------------------------------------------------------
consensus_8487#1      ------------------------------------------------------------
                                                                                  

consensus_8487#0      GCAGTGCCGCCGTCTTCTCCCCTCCGCTCCTTTGCTGCTGCTGCTGCTGCTGCTGCATCT 960
consensus_8487#2      ------------------------------------------------------------
consensus_8487#1      ------------------------------------------------------------
                                                                                  

consensus_8487#0      GAGGGGAGAGAGGAGAGTGCTAGGAGAGAGCATATTGGACCAAAGTGCAACTAAGTCATT 1020
consensus_8487#2      ------------------------------------------------------------
consensus_8487#1      ------------------------------------------------------------
                                                                                  

consensus_8487#0      TTACAACGGAATGGTGTGAAGGATGCGATAAAGTTTAACTATGGCAGAGAGATGCTTGAA 1080
consensus_8487#2      ------------------------------------------------------------
consensus_8487#1      ---------------CGGAAGGCTGCGTAGTCATCTCGTT-TGATCGAGCTGAGCACGAG 44
                                                                                  

consensus_8487#0      TATTTTAGTGATACAGAGACAAGCACCATCTTTCTTAATGGCATTTAGGGAAAAACCTCC 1140
consensus_8487#2      ------------------------------------------------------------
consensus_8487#1      AGGAGAAGAAGCAAGCACGCGA-CGCAACCATCGCCGCGCCTCCGCGACCCCTGACTGCG 103
                                                                                  

consensus_8487#0      CAAGGGAGAGGGCACAGGCGGCGGCGACGGTGGCAGCATCCTCCAATGGCGGGCAACGAC 1200
consensus_8487#2      ------------------------------------------------------------
consensus_8487#1      CGAGGAGGCGAGCTCGGGCCGGAG---CTGAGGGAGCTCGCCATGGCGACCGGCAACCTG 160
                                                                                  

consensus_8487#0      CAACGGGTGATATTGGTTGGAGACGGCGGCGCTCGCGGGCCGCCGCTGTCCAATGCGCCG 1260
consensus_8487#2      ------------------------------------------------------------
consensus_8487#1      GCCAGCGTGGTGGTGGCGGTGGACGGGAGCGA--GGAGAGCATGAACGCGCTGCGGTGGG 218
                                                                                  

consensus_8487#0      CGCCATGGAGATCCCCACCACCGGCCGACCTCATCCTCGCCATCTCTCTCCGCTGCCTGG 1320
consensus_8487#2      -------------TTTGTGAAGTGCACACCACATCAGATTGAACTAACTAATTCAATTAA 47
consensus_8487#1      CGCTCGACAACCTCCGCCTCCGCCCCGACGGCGCGCTCGTCGTGCTCCACGTCCAGCCG- 277
                                              *  **  *               *            

consensus_8487#0      TTGCCAGACCTAGCC---AGCCTCCCCTCGGCTCGTCAGCCCCCTGCGGCCCCGCCTCGA 1377
consensus_8487#2      TTGCCAGGT---------AGGTTCCCATCTGG-CATAAGCATACATCAGAAAAATGAAGC 97
consensus_8487#1      CCGCCGAGCATCGCCGCCGGGCTCAACCCCGG--ACCCATCCCCTTCGGC--GGCCCGAG 333
                        ***              *  **    * *            *  * *           

consensus_8487#0      CGCCCCTCCTCTGCCGGTCGGCT--TCAGGCTCGACGACGCCC-CAAGATCCAGTCTCCA 1434
consensus_8487#2      TTTCATAACAATGAAGGCAAACTAGTTTAAGTTAACAAGAC-----AGTGATAGTTTTCA 152
consensus_8487#1      CGAGGTGGAGGTGCCGGC--GTTCACGCAGGCGATCGAGGCGCACCAGCGGCGGATCACG 391
                                 **  **     *            * *  *     **     *    * 

consensus_8487#0      CGAGCTCTGCCCGAGAGTGT-CAGACCTTCAGCG-TCGCGTCTGTACATC-CGCCGGGCG 1491
consensus_8487#2      GCTGTTGAAAGAAAATATTTATAGCAATTTAGCAATTCTAACTATGGATCACACTAGACA 212
consensus_8487#1      CAGGCTATCCTGGATCACGC------GCTCAAGATTTGC-TCCGAGAAGAATGTGGAGGT 444
                         * *       *              * *    *     *     *            

consensus_8487#0      CCGGCTGAGAGCGTCCATCCCAAATCATTTTTGCTGTCGTTATTGTTCAACTGGAATTGT 1551
consensus_8487#2      AGAGATTAGAATGAGATGGATAAACAAAAACCATTTATATCTTGGTTTAAGAACCCCAAC 272
consensus_8487#1      GAAGACGGATGTGGTCGTTGGGGATCCTAAGGAGAAGATCTGCGAGGTGACGG---CAAA 501
                         *        *          *                         *          

consensus_8487#0      TCTCATGATTTTGTTGCCAGCCTAGGTGAAATAGAGCAATGCTACACGTACTAAATTTTT 1611
consensus_8487#2      TTGTGTAGATCAATTTTTAGCAC----------GAGCACTGCTACACATACTAAATTTTT 322
consensus_8487#1      TCTCAAGGCCGATCTGCTCGTCATGGGGTGCCGTGCTTTTGGCCCCCTCAAGAGAATGTT 561
                      *             *    *                   **   * *  *  * * * **

consensus_8487#0      CTTACTAAACTTTTACTAACAATCATCTCAACCGTTTAATTTAAATATATGGAAGTTACA 1671
consensus_8487#2      CTTACTAAACTTTTACTAACAATCATCTCAACCATTTGATTTTAGTAGATGGAAGTTATA 382
consensus_8487#1      CTTAG-GAAGTGTGAGCAACTACTGCATCAACAATGTGGTCTGTCCAGTTG----TTGTA 616
                      ****   ** * * *  *** *     *****  * *  * *    *  **    **  *

consensus_8487#0      AAAAATCTAGATGCACTCATAGCATGACACATCANG--TGTTAGTAAGAATTTAGTAAAA 1729
consensus_8487#2      AAAAATTTAGACGCACTCATAGCATGACATATCAGTGTTAGTAATAAGAATTTAGTAAGA 442
consensus_8487#1      A-----TCAAAGGCACTTGAGCCATCTTCGATCAGTATTCTTTGCTGCACTTTAAGTCAA 671
                      *       * * *****     ***     ****    *  *      * ****     *

consensus_8487#0      AAAAGTTAGTACG-TATAGCCTTTTCCTTTCAACATTGGGATCTCGATATGATTTTTGTC 1788
consensus_8487#2      AAAAGTTAGTATG-CATAGCCTTTTCCTT-----ATTAGTACCCTACAAT--TTGGTGCT 494
consensus_8487#1      GCCTCTGAGGTTGCTACTGCGCTATCATCC--GTAATGGTACTGCATATTTCACATTTGG 729
                           * **   *  *  **  * ** *      * * * *        *      *   

consensus_8487#0      GCATTTGCTTATGAACCTATTTGTTTTTCTAAAAATAGCAATCTTCTGCTTATTGGCACT 1848
consensus_8487#2      AATCCCACTTATTAAGC-ATGTGC---------AAT-GCAATT---TAATTATTTAGATT 540
consensus_8487#1      AGACTAGTTTGTTGTGC-ATCTTTTTGTCACATGGTGGTATTTA-CGGATGATAGTTGTC 787
                              ** *    * ** *             * * * *       * **       

consensus_8487#0      GC-CGTTTTCACATTTGTAACCTTTCCATTTCCTCTGCTACTCTAAAAGCACAGGTGTCG 1907
consensus_8487#2      TA-AATGTTTAAATGCCAAGATATCCTGCCAAATCC-CAGATGGAGAATCTACGACGGAA 598
consensus_8487#1      GCGTGCATTTGAGCAAGGAAATATG-TATTGATTGTTCAATTGTAGAAATAAATGTGCCA 846
                             **         *    *         *   *   *  * **        *   

consensus_8487#0      TCCTTCCTTTCCCTCCCC-CAATCCCACGTATGAAAAACCACTCCAAAAA--AAATCCAG 1964
consensus_8487#2      TTTTGGATCAAAGTCACTATCACTATATGGATGCATGATAATTTTTGCAGTTGAATCCTG 658
consensus_8487#1      TGTAGCACATTGTTTTGTATATTCTTGTATTTGT----TCTGTGCTAAAC----ATCACA 898
                      *            *                 **         *     *     ***   

consensus_8487#0      TGCAACTAAAAAACTAGCCAACAGACAAAAAAAAAAACACATTCCCCAGATCCCATTGCA 2024
consensus_8487#2      AGCTGGGATAAGACATGCCAGAACTTGACGGAATACAAACCCGATCCCAAACAGTTTTGT 718
consensus_8487#1      AACTTGGCAGAAGTGAGTTCCCTTTTGTATGAATCCTGTCATACTTTTATGTTCCTTGAG 958
                        *       *     *              **      *               **   

consensus_8487#0      AGGGTTGAAAAGATTGAGCCATGTTCCCATATCCCGTTGCAATGCACGGGCACATGACTA 2084
consensus_8487#2      GGGGCCAAATTGAAGGGACACACCCTCCAGAGCTAAACTAAAT---TAAATGCATGTTTC 775
consensus_8487#1      ATGTCCAAAGT------------------------------------------------- 969
                        *    **                                                   

consensus_8487#0      GTAATGATAAAAGCTTACCTCTTATCCATCATGTGTTCTCTGGAGAAATGCATAATTGAA 2144
consensus_8487#2      AAGAC-AGAACATCT--------------------------------------------- 789
consensus_8487#1      ------------------------------------------------------------
                                                                                  

consensus_8487#0      ACTGATGAGTTTGCACAGAGCGACTTGCATCATTAATTGTACTATGTGGTTCCATCTGGG 2204
consensus_8487#2      ------------------------------------------------------------
consensus_8487#1      ------------------------------------------------------------
                                                                                  

consensus_8487#0      AATTATTGTCTGATGTAAATTGTATTGGTGTTTCCCATATTCGTACTAATCATCAAAACA 2264
consensus_8487#2      ------------------------------------------------------------
consensus_8487#1      ------------------------------------------------------------
                                                                                  

consensus_8487#0      ATCTGTAATATTAGCTTTTTCCGTTAT 2291
consensus_8487#2      ---------------------------
consensus_8487#1      ---------------------------


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)