cluster # 8787

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Oryza sativa
cluster # 8787 cluster # 8787 Sequences # 5 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8787#0 length = 1169 sequences # 5
consensusID : consensus_8787#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1169
fasta sequence
                              [ATCGAACCATTGCCGTCATATGGGAGAGGGCGTGAGCTTCCCGGTGGAAGATACATGAGTTTGATCCATGGCAATGGCCTTCAGGATGTTGTCATTACAGGCGATAATGGAACTATCGATGGCCAAGGCAGTGCGTGGTGGGACATGTGGAAGAAGGGCACACTACCCTTCACTAGGCCTCACTTACTCGAGCTGATGAACTCTTCTGATGTTGTCGTCTCCAATGTGGTCTTCCAGGATTCGCCGTTTTGGAACATCCATCCTGTTTACTGCAGCAATGTGGTGATAAGAAATGTGACCGTACTAGCTCCACATGACTCACCCAACACTGATGGAATTGATCCAGATTCCAGCAGCAACGTCTGCATCGAGGACTGCTACATCTCGACAGGAGATGATCTGATCGCCATCAAGAGTGGCTGGGACGAGTACGGCATGGCCTACGGGCGCCCCAGCTCGCACATCACCATCCGCCGGATCACCGGCTCCTCCCCCTTCGCCGGCTTCGCTGTCGGGAGCGAGACGTCCGGCGGCGTGGAGCACGTCCTCGCGGAGCACCTCAACTTCTTCAGCTCGGGGTTCGGCATCCACATCAAGACCAACACCGGCAGGGGAGGGTTCATCCGGAACGTCACCGTCTCCGACGTGACG-CTGGACTCCGTCCGCTACGGCCTGAGGATCGCCGGCGATGTCGGCGGGCACCCCGACGACCGCTACGACCGGAACGCGCTCCCCGTCGTGGACGGCCTGACGATCAAGAACGTCCAGGGCCAGAACATCAGGGAGGCAGGGTCGATCAAGGGGATCGCGACGTCGG-CCTTCTCCAGGATCT-GCCTGTCCAACGTGAAGCTCA-ACGGCGGCGCGGCGGTCCGGCCGTGGAAGTGCGAGGCCGTCAGCGGGGCGGCGCTCGACGTGCAGCCGTCGCCGTGCACGGAGCTGACCAGCACGTCCGGGATGAGCTTCTGTACAAATTCGCTGTGAACTGAAACTGTCAAGCGTGCATGTTCA-GGGGC-CAAGTTGTTCTATAATTATCA-AGGCGGTTTTTTTCTATCGATGAGGCAATGAGCGTGTTATGTTGGTAA-CGCCCATCAAAGATATGCTAAACATTTAATCATTCGTCAGAGTATATGAGTAATTCTCCGGAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AK058453             [ATCGAACCATTGCCGTCATATGGGAGAGGGCGTGAGCTTCCCGGTGGAAGATACATGAGTTTGATCCATGGCAATGGCCTTCAGGATGTTGTCATTACAGGCGATAATGGAACTATCGATGGCCAAGGCAGTGCGTGGTGGGACATGTGGAAGAAGGGCACACTACCCTTCACTAGGCCTCACTTACTCGAGCTGATGAACTCTTCTGATGTTGTCGTCTCCAATGTGGTCTTCCAGGATTCGCCGTTTTGGAACATCCATCCTGTTTACTGCAGCAATGTGGTGATAAGAAATGTGACCGTACTAGCTCCACATGACTCACCCAACACTGATGGAATTGATCCAGATTCCAGCAGCAACGTCTGCATCGAGGACTGCTACATCTCGACAGGAGATGATCTGATCGCCATCAAGAGTGGCTGGGACGAGTACGGCATGGCCTACGGGCGCCCCAGCTCGCACATCACCATCCGCCGGATCACCGGCTCCTCCCCCTTCGCCGGCTTCGCTGTCGGGAGCGAGACGTCCGGCGGCGTGGAGCACGTCCTCGCGGAGCACCTCAACTTCTTCAGCTCGGGGTTCGGCATCCACATCAAGACCAACACCGGCAGGGGAGGGTTCATCCGGAACGTCACCGTCTCCGACGTGACG CTGGACTCCGTCCGCTACGGCCTGAGGATCGCCGGCGATGTCGGCGGGCACCCCGACGACCGCTACGACCGGAACGCGCTCCCCGTCGTGGACGGCCTGACGATCAAGAACGTCCAGGGCCAGAACATCAGGGAGGCAGGGTCGATCAAGGGGATCGCGACGTCGG CCTTCTCCAGGATCT GCCTGTCCAACGTGAAGCTCA ACGGCGGCGCGGCGGTCCGGCCGTGGAAGTGCGAGGCCGTCAGCGGGGCGGCGCTCGACGTGCAGCCGTCGCCGTGCACGGAGCTGACCAGCACGTCCGGGATGAGCTTCTGTGCAAATTCGCTGTGAACTGAAACTGTCAAGCGTGCATGTTCA GGGGC CAAGTTGTTCTATAATTATCA AGGCGGTTTTTTTCTATCGATGAGGCAATGAGCGTGTTATGTTGGTAA CGCCCATCAAAGATATGCTAAACATTTAATCATTCGTCAGAGTATATGAG                                     ]
[+] EMBL AK099329             [                                                                                                                                                                                                           TTCTGATGTTGTCGTCTCCAATGTGGTCTTCCAGGATTCGCCGTTTTGGAACATCCATCCTGTTTACTGCAGCAATGTGGTGATAAGAAATGTGACCGTACTAGCTCCACATGACTCACCCAACACTGATGGAATTGATCCAGATTCCAGCAGCAACGTCTGCATCGAGGACTGCTACATCTCGACAGGAGATGATCTGATCGCCATCAAGAGTGGCTGGGACGAGTACGGCATGGCCTACGGGCGCCCCAGCTCGCACATCACCATCCGCCGGATCACCGGCTCCTCCCCCTTCGCCGGCTTCGCTGTCGGGAGCGAGACGTCCGGCGGCGTGGAGCACGTCCTCGCGGAGCACCTCAACTTCTTCAGCTCGGGGTTCGGCATCCACATCAAGACCAACACCGGCAGGGGAGGGTTCATCCGGAACGTCACCGTCTCCGACGTGACG CTGGACTCCGTCCGCTACGGCCTGAGGATCGCCGGCGATGTCGGCGGGCACCCCGACGACCGCTACGACCGGAACGCGCTCCCCGTCGTGGACGGCCTGACGATCAAGAACGTCCAGGGCCAGAACATCAGGGAGGCAGGGTCGATCAAGGGGATCGCGACGTCGG CCTTCTCCAGGATCT GCCTGTCCAACGTGAAGCTCA ACGGCGGCGCGGCGGTCCGGCCGTGGAAGTGCGAGGCCGTCAGCGGGGCGGCGCTCGACGTGCAGCCGTCGCCGTGCACGGAGCTGACCAGCACGTCCGGGATGAGCTTCTGTACAAATTCGCTGTGAACTGAAACTGTCAAGCGTGCATGTTCA GGGGC CAAGTTGTTCTATAATTATCA AGGCGGTTTTTTTCTATCGATGAGGCAATGAGCGTGTTATGTTGGTAA CGCCCATCAAAGATATGCTAAACATTTAATCATTCGTCAGAGTATATGAGT                                    ]
[+] EMBL BI809309             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             TCTCCGACGTGACGTCTGGACTCCGTCCGCTAC GCCTGAGGATCACCGGCGATGTCGGCGGGCACCCCGACGACCGCTACGACCGGAACGCGCTCCCC TCGTGGACGGCCTGACGATCAAGAACGTCCAGGGCCAGAACATCAGGGAGGCAGGGTCATTCAAGGGGATCGCGAC TCGGCCCTTCTCCAGGATCT GCCTGTCCAACGTGAAGCTCA ACGGCGGC C GCGGTCC GCCGTGGAAGTGCGA GCCGTCAGC GGGCGGCGCTCGACGTGCA CCGTC CCGTGCACGGAGCTGACCAGCACGTCCGGGATGAGCTTCTGTACAAATTCGCTATGAACTGAAACTGTCAAGCGTGCATGTTCA GGGGCACAAGTTGTTCTATAATTATCA AGGCGGTTTTTTTCTATCGATGAGGCAATGAGCGTGTTATGTTGGTAA CGCCCATCAAAGATATGCTAAACATTTAATCATTCGTCAGAGTATATGAGTAATTCTCCGGAAAAAAAAAA                ]
[+] EMBL BI809426             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             acgGGCCCTGAACATCAGGGAGTCCGGGTCATTCAAGGGGATCGCGACGTCGG CCTTCTCCCGGATCTCGCCTGTCCCACGTGAAGCTCACACGGCGGCGCGGCGGTCC GCCGTGGAAGTGCGA GCCGTCA C GGGCGGCGCTCGACGT CA CCGTCGCCGTGCACGGAGCTGACCAGCACGTCCGGGATGAGCTTCTGTACAAATTCGCTATGAACTGAAACTGTCAAGCGTGCATGTTCACGGGGC CCAGTTGTTCTATAATTATCACAGGCGGTTTTTTTCTATCGATGAGGCCATGAGCGTGTTATGTTGGTAA CGCCCATCCAAGATATGCTAAACATTTAATCATTCGTCCGAGTATATGAGTAATTCTCCGGAAAAAAAAAA                ]
[+] EMBL AU172834             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           AACGTNAAGCTCA ACGGCGGCGCGGCGGTCCGGCCGTGGAAGTGCGAGGCCGTCANCGGGGCGGCGCTCGACGTGCANCCGTCGCCGTGCACGGANCTGACCAGCACGTCCGGGATGAGCTTNTGNACAAATTCGCTGTGAACTGAAACTGTCAAGCGNGCATGTTCA GGGGC CAAGTTGTTNTATAATTATCA AGGCGGTTTTTTTCTATCNATNAGGCAATGAGCGTGTTATGTTGGTAACCGCCCNTCAAANATATGCTAAACATTTAATCATTNGTCAGAGTATATGAGTAATTNTCCGGAAAAAAAAAAAAAAAAAAAAAAAAAA]




>consensus_8787#0
ATCGAACCATTGCCGTCATATGGGAGAGGGCGTGAGCTTCCCGGTGGAAGATACATGAGT
TTGATCCATGGCAATGGCCTTCAGGATGTTGTCATTACAGGCGATAATGGAACTATCGAT
GGCCAAGGCAGTGCGTGGTGGGACATGTGGAAGAAGGGCACACTACCCTTCACTAGGCCT
CACTTACTCGAGCTGATGAACTCTTCTGATGTTGTCGTCTCCAATGTGGTCTTCCAGGAT
TCGCCGTTTTGGAACATCCATCCTGTTTACTGCAGCAATGTGGTGATAAGAAATGTGACC
GTACTAGCTCCACATGACTCACCCAACACTGATGGAATTGATCCAGATTCCAGCAGCAAC
GTCTGCATCGAGGACTGCTACATCTCGACAGGAGATGATCTGATCGCCATCAAGAGTGGC
TGGGACGAGTACGGCATGGCCTACGGGCGCCCCAGCTCGCACATCACCATCCGCCGGATC
ACCGGCTCCTCCCCCTTCGCCGGCTTCGCTGTCGGGAGCGAGACGTCCGGCGGCGTGGAG
CACGTCCTCGCGGAGCACCTCAACTTCTTCAGCTCGGGGTTCGGCATCCACATCAAGACC
AACACCGGCAGGGGAGGGTTCATCCGGAACGTCACCGTCTCCGACGTGACGCTGGACTCC
GTCCGCTACGGCCTGAGGATCGCCGGCGATGTCGGCGGGCACCCCGACGACCGCTACGAC
CGGAACGCGCTCCCCGTCGTGGACGGCCTGACGATCAAGAACGTCCAGGGCCAGAACATC
AGGGAGGCAGGGTCGATCAAGGGGATCGCGACGTCGGCCTTCTCCAGGATCTGCCTGTCC
AACGTGAAGCTCAACGGCGGCGCGGCGGTCCGGCCGTGGAAGTGCGAGGCCGTCAGCGGG
GCGGCGCTCGACGTGCAGCCGTCGCCGTGCACGGAGCTGACCAGCACGTCCGGGATGAGC
TTCTGTACAAATTCGCTGTGAACTGAAACTGTCAAGCGTGCATGTTCAGGGGCCAAGTTG
TTCTATAATTATCAAGGCGGTTTTTTTCTATCGATGAGGCAATGAGCGTGTTATGTTGGT
AACGCCCATCAAAGATATGCTAAACATTTAATCATTCGTCAGAGTATATGAGTAATTCTC
CGGAAAAAAAAAAAAAAAAAAAAAAAAAA
clustalw multiple alignements is not computed in this case