cluster # 8965

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Oryza sativa
cluster # 8965 cluster # 8965 Sequences # 6 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_8965#0 length = 378 sequences # 6

consensusID : consensus_8965#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 378
fasta sequence

                              [TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATAC-AAGTTGGGGCTGAGTTTAGTTTTACATATAAGTTTCGTTTTTGACAATTTGTCCAATATTTTTATTACAATGGGTTTGGGCATATAATTACCCGGGGGCTAACATTCACATATGCATGCTTTTAAACCTATGTGGATACATACATATGTCCATACATACCCAGGTGATGTTGCCCCCACCCAGATGAAAAAAAAAAACCTGAACCCCCAAACTGGGAAAGGGGAAACCAATGCAGGGGGGCCCGATTCAAACGTTCAAAGCTGCCAAAACCGAATAAATCAATCGAGTTTCCTTTGTATAAAACTCACAAAGGAGCTTGGT]

[+] EMBL CF312445             [TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTTTACAAAGTTGGGGCTGGGTTTAGTTTTACATATAAGTATCGTTTTTGACAATTTGTCCAATATTTTTATTACAATGGGTTTGGGCATATAATTACCCGGGGGCTAACATTCACATATGCATGCTTTTAAACCTATGTGGATACATACATATGTCCATACATACCCAGGTGTTGTTGCCCCCACCCAGATG AAAAAAAAAACCTGAACCCCCAAACTGGGAAAGGGGAAACCAATGCAGGGGGGCCCGATTCAAACGTTCAAAGCT                                                           ]
[+] EMBL CF307569             [ TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA AA AAGTTGGGGCGGAGTTTAGTTTTACATATAAGTTTCGTTTTTGACAATTTGGCCAATTTTTTTATTACAATGGGTTTGGGCATATAATTACCCGGGGGCTAACATTCAAATATGCATGCTTTTAAACCTATGGGGATACATACATTTGGCCATACATACCCAGGTGATGTTGCCCCCACCCAGATGAAAAAAAAAAACCTGAACCCCCAAACTGGGAAAGGGGAAACCAATGCAGGGGGGCCCGATTCAAACGTTCAAAG                                                             ]
[+] EMBL CF335154             [  TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA AC AAGTTGGGGCTGGGTTTAGTATTACATATAAGTATCGTTTTTGACAATTTGTCCAATATTTTTATTACAATGGGTTTGGGCATATAATTACCCGGGGGCTAACATTCACATATGCATGCTTTTAAACCTATGGGGATACATACATTTGTCCATACATACCCAGGTGGTGTTGCCCCCACCCAGATGAAAAAAAAAAA CTGGACCCCCAAACTGGGAAAGGGGAAACCAATGCAAGGGGGCCCGATTCAAACGTTCAAAGCTGCCAAAACCGAATAAATAAATCGAGTTTCCTT                           ]
[+] EMBL CF337718             [   TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAC AAGTTGGGGCTGAGTTTAGTTTTACATATAAATTTCGTTTTTGACAATTTGTTTAATATATTTATTACAAGGGGTTTGGGCATATAATTACCCGGGGGCTAACATTCAAATATGCATGCTTTTAAACCTATGTTGATACATACATTTGTCCATACATACCCAGGTGATGTTGCCCCCACCCAGATGAAAAAAAAAAACCTGGACCCCCAAACTGGGAAAGGGGAAACCAATGCAAGGGGGCCCGATTCAAACGTTCAAAGCTGCCAAAACCGAATAAATCAATCGAGTCTCCT                            ]
[+] EMBL CF333280             [     TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATAC AAGTTGGGGCTGAGTTTAGTATTACATATAAGTTTCGTTTTTGACAATTTGTCCAATATATTTATTACAAGGGGTTTGGGCATATGATTAACCGGGGGCTAACATTCACATATGCATGCTTTTAAACCTATGTGGATACATACATATGTCCATACATACCCAGGTGATGTTGCCCCCACCCAGATGAAAAAAAAAAACCTGAACCCCCAAACTGGGAAAGGGGAAACCAATGCAGGGGGGCCCGATTCAAACGTTCAAAGCTGCCAAAACCGAATAAATCAATCGAGTTTCCTTTGTATAAAACTCACAAAGGAGCTTGGT]
[+] EMBL CF295385             [           TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAT C AAGTTGGGGCTGAGTTTAGTTTTACATATAAGTTTCGTTTTTGACGATTTGTCCAATATTTTTATTACGAGGGGTTTGGGCATATGATTACCCGGGGGCTAACATTCACATATGCATGCTTTTCAACCTATGGGGATCCCTACATATGTCCATACATACCCAGGTGATGTTGCCCCAACCAAGATGAAAAAAAAAAAACTGAACCCCCAAACTGGGAAAGGGGAAACCAATGCAGGGGGGCCCGATTCAAACGTTCAAAGCTGCCAAAACCGAATAAATCAATCGAGTCTCCTTTGTATAAAACTCACAAGGGAGCTTGct]




>consensus_8965#0
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATACAAG
TTGGGGCTGAGTTTAGTTTTACATATAAGTTTCGTTTTTGACAATTTGTCCAATATTTTT
ATTACAATGGGTTTGGGCATATAATTACCCGGGGGCTAACATTCACATATGCATGCTTTT
AAACCTATGTGGATACATACATATGTCCATACATACCCAGGTGATGTTGCCCCCACCCAG
ATGAAAAAAAAAAACCTGAACCCCCAAACTGGGAAAGGGGAAACCAATGCAGGGGGGCCC
GATTCAAACGTTCAAAGCTGCCAAAACCGAATAAATCAATCGAGTTTCCTTTGTATAAAA
CTCACAAAGGAGCTTGGT

clustalw multiple alignements is not computed in this case