cluster # 9417

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Oryza sativa
cluster # 9417 cluster # 9417 Sequences # 6 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9417#0 length = 1095 sequences # 6
consensusID : consensus_9417#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1095
fasta sequence
                              [CTCTCTCTCTCCCCCCCATCTCTACAGAGGCAGCAGCAGCGGCGGCGGCGACAAGGGAAGCCGATGGCCATGGCGACCTCCACCTTCTCCCCCCCGGCCTCGCAGCTCTCCCTCACCCGCCGCCGCCTCCACCCGGGCCCCGACCTCCTCACCCTCTCCTCCCCGCGCCTCCGCGCCGGCCTCCGCCTCGCCCGCGCCGCCGCCGGGGAGGCCCCCGTGGAGACTGTCGAGGCGCCGCCGAGCAAGCCGGAGGCCGAGCCGTCCCCCGCTGCGTCCAACGGGGCCGCCGTCAAGGCCGAGAAGCCGCCGGCGGCGGCGGCGGCGCCCCCGCTGCCCAAGTTCCGGGACTCGAGGTGGGTCAACGGGACGTGGGACCTCAGGCAGTTCGAGAAGGGCGGCGCCGTCGACTGGGACGCCGTCATAGACGCCGAGGCCAGGAGAAGGAAATGGCTTGAAGATTGTCCAGAGGCAACTAGCCCTGACGAGGCCGTTGTCTTCGATACTTCAATCATACCGTGGTGGGCATGGATGAAGCGTTTCCATCTCCCTGAAGCCGAGAAGCTAAATGGCCGTGCTGCCATGATTGGCTTCTTCATGGCATACTTTGTTGATAGCTTGA-CCGGCGTGGGGCTTGTCGA-CCAGATGGGCAACTTCTTCTGCAAAACCCTACTGTTTGTTGCTGTGGCTGGTGTGCTGCTGGTCAGGAAAAACGAGGACATAGAGACAGTGAAGAAGCTCATCGATGAGACGACGTTCTACGACAAGCAATGGCAGGCAACCTGG-CAAGATGAGTCCCCTTCTCAGCCCAAGAAATAGCTCTGAAGTGGAATCTGAATCTGAATCCTCCCTATGTTGTATTGTATCACTTCTTTTTGCAGCCCTTTTCTCAACCCATTTATTAGTGAGGCTCAGTACA-TTTTGAT-GATCTTAATA-CCTATGACGTCTTGTAAAAAGTACGAACTCGTTTCTGTGCTAGAGGTTAACGTTGCTGCGGGTTACTTGGTTGAATGTTTTCTTTGTGAGAATTGCTTGTACTAGTTACTCCCTCCGCTTCATATTATAAAATGCTTTGACTCTTTTCTAAAAAAAAAAAAA]

[+] EMBL AK071006             [CTCTCTCTCTCCCCCCCATCTCTACAGAGGCAGCAGCAGCGGCGGCGGCGACAAGGGAAGCCGATGGCCATGGCGACCTCCACCTTCTCCCCCCCGGCCTCGCAGCTCTCCCTCACCCGCCGCCGCCTCCACCCGGGCCCCGACCTCCTCACCCTCTCCTCCCCGCGCCTCCGCGCCGGCCTCCGCCTCGCCCGCGCCGCCGCCGGGGAGGCCCCCGTGGAGACTGTCGAGGCGCCGCCGAGCAAGCCGGAGGCCGAGCCGTCCCCCGCTGCGTCCAACGGGGCCGCCGTCAAGGCCGAGAAGCCGCCGGCGGCGGCGGCGGCGCCCCCGCTGCCCAAGTTCCGGGACTCGAGGTGGGTCAACGGGACGTGGGACCTCAGGCAGTTCGAGAAGGGCGGCGCCGTCGACTGGGACGCCGTCATAGACGCCGAGGCCAGGAGAAGGAAATGGCTTGAAGATTGTCCAGAGGCAACTAGCCCTGACGAGGCCGTTGTCTTCGATACTTCAATCATACCGTGGTGGGCATGGATGAAGCGTTTCCATCTCCCTGAAGCCGAGAAGCTAAATGGCCGTGCTGCCATGATTGGCTTCTTCATGGCATACTTTGTTGATAGCTTGA CCGGCGTGGGGCTTGTCGA CCAGATGGGCAACTTCTTCTGCAAAACCCTACTGTTTGTTGCTGTGGCTGGTGTGCTGCTGGTCAGGAAAAACGAGGACATAGAGACAGTGAAGAAGCTCATCGATGAGACGACGTTCTACGACAAGCAATGGCAGGCAACCTGG CAAGATGAGTCCCCTTCTCAGCCCAAGAAATAGCTCTGAAGTGGAATCTGAATCTGAATCCTCCCTATGTTGTATTGTATCACTTCTTTTTGCAGCCCTTTTCTCAACCCATTTATTAGTGAGGCTCAGTACA TTTTGAT GATCTTAATA CCTATGACGTCTTGTAAAAAGTACGAACTCGTTTCTGTGCTAGAGGTTAACGTTGCTGCGGGTTACTTGGTTGAATGTTTTCTTTGTGAGAATTGCTTGTACTAGTTACTCCCTCCGCTTCATATTATAAAATGCTTTGACTCT                  ]
[+] EMBL AK101502             [CTCTCTCTCTCCCCCCCATCTCTACAGAGGCAGCAGCAGCGGCGGCGGCGACAAGGGAAGCCGATGGCCATGGCGACCTCCACCTTCTCCCCCCCGGCCTCGCAGCTCTCCCTCA CCGCCGCCGCCTCCACCCGGGCCCCGACCTCCTCACCCTCTCCTCCCCGCGCCTCCGCGCCGGCCTCCGCCTCGCCCGCGCCGCCGCCGGGGAGGCCCCCGTGGAGACTGTCGAGGCGCCGCCGAGCAAGCCGGAGGCCGAGCCGTCCCCCGCTGCGTCCAACGGGGCCGCCGTCAAGGCCGAGAAGCCGCCGGCGGCGGCGGCGGCGCCCCCGCTGCCCAAGTTCCGGGACTCGAGGTGGGTCAACGGGACGTGGGACCTCAGGCAGTTCGAGAAGGGCGGCGCCGTCGACTGGGACGCCGTCATAGACGCCGAGGCCAGGAGAAGGAAATGGCTTGAAGATTGTCCAGAGGCAACTAGCCCTGACGAGGCCGTTGTCTTCGATACTTCAATCATACCGTGGTGGGCATGGATGAAGCGTTTCCATCTCCCTGAAGCCGAGAAGCTAAATGGCCGTGCTGCCATGATTGGCTTCTTCATGGCATACTTTGTTGATAGCTTGA CCGGCGTGGGGCTTGTCGA CCAGATGGGCAACTTCTTCTGCAAAACCCTACTGTTTGTTGCTGTGGCTGGTGTGCTGCTGGTCAGGAAAAACGAGGACATAGAGACAGTGAAGAAGCTCATCGATGAGACGACGTTCTACGACAAGCAATGGCAGGCAACCTGG CAAGATGAGTCCCCTTCTCAGCCCAAGAAATAGCTCTGAAGTGGAATCTGAATCTGAATCCTCCCTATGTTGTATTGTATCACTTCTTTTTGCAGCCCCTTTCTCAACCCATTTATTAGTGAGGCTCAGTACA TTTTGAT GATCTTAATA CCTATGACGTCTTGTAAAAAGTACGAACTCGTTTCTGTGCTAGAGGTTAACGTTGCTGCGGGT                                                                                                   ]
[+] EMBL AU057610             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    TGATTGGCTTCTTCATGGCATACTTTGNTGATAGCTTGA CCGGCGTGGGGCTTGTCGA CCAGATGGGCAACTTCTTCTGCAAAACCCTACTGTTTGTTGCTGTGGCTGGTGTGCTGCTGGTCAGGAAAAACGAGGACATAGAGACAGTGAAGAAGCTCATCGATGAGACGACGTTCTACGACAAGCAATGGCAGGCAACCTGG CAAGATGAGTCCCCTTCTCAGCCCAAGAAATAGCTCTGAAGTGGAATCTGAATCTGAATCCTCCCTATGTTGTATTGTATCACTTCTTTTTGCAGCCCTTTTCTCAACCCATTTATTAGTGAGGCTCAGTACA TTTTGAT GATCTTAATA CCTATGACGTCTTGTAAAAAGTACGAACTCGTTTCTGTGCTAGAGGTTAACGTTGCTGCGGGTTACTTGGTTGAATGTTTTCTTTGTGAGAATTGCTTGTACTAGTTACTCCCTCCGCTTCATATTATAAAATGCTTTGACTCTTTTCTAAAAAAAAAAAAA]
[+] EMBL AU057609             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    TGATTGGCTTCTTCATGGCATACTTTGTTGATAGCTTGA CCGGCGTGGGGCTTGTCGA CCAGATGGGCAACTTCTTCTGCAAAACCCTACTGTTTGTTGCTGTGGCTGGTGTGCTGCTGGTCAGGAAAAACGAGGACATAGAGACAGTGAAGAAGCTCATCGATGAGACGACGTTCTACGACAAGCAATGGCAGGCAACCTGG CAAGATGAGTCCCCTTCTCAGCCCAAGAAATAGCTCTGAAGTGGAATCTGAATCTGAATCCTCCCTATGTTGTATTGTATCACTTCTTTTTGCAGCCCTTTTCTCAACCCATTTATTAGTGAGGCTCAGTACA TTTTGATGGATCTTAATA CCTATGACGTCTTGTAAAAAGTACGAACT                                                                                                                                     ]
[+] EMBL BI805255             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 acTGGCATACTTTGTTGATAGCTTGACCCGGCGTGGGGCTTGTCGACCCAGATGGGCAACTTCTTCTGCCAAACCCTACTGTTTGTTGCTGTGGCTGGTGTGCTGCTGGTCAGGAAAAACGAGGACATAGAGACAGTGAAGAAGCTCATCGATGAGACGACGTTCTACGACAAGCAATGGCAGGCAACCTGG C AGATGAGTCCCCTTCTCAGCCCCAGAAATAGCTCTGAAGTGGAATCTGAATCTGAATCCTCCCTATGTTGTATTGTATCACTTCTTTTTGCAGCCCTTTTCTCAACCCATTTATTAGTGAGGCTCAGTACACTTTTGAT GATCTTAATACCCTATGACGTCTTGTAAAAAGTACGAACTCGTTTCTGTGCTAGAGGTTAACGTTGCTGCGGGTTAaaaaaaaaa                                                                                        ]
[+] EMBL BI798340             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  CTGCAAAA CCTACTGTTTGTTGCTGTGGCTGGTGTGCTGCTGGTCAGGAAAAACGAGGACATAGAGACAGTGAAGAAGCTCATCGATGAGACGACGTT TACGACAA CCATGGCA ACAACCTGGCCAAGATGAGTCCCCTTCTCAGCCCAAGAAATAGCTCTGAAGTGGAATCTGAATCTGAATCCTCCCTATGTTGTATTGTATCACTTC TTTTCCA CCCTTTTC CAACCCATTTATTAGTGAGGC CAGTAC   TTTGAG GATCTAAATA CCTAGGACGTC TGTAAAA                                                                                                                                               ]




>consensus_9417#0
CTCTCTCTCTCCCCCCCATCTCTACAGAGGCAGCAGCAGCGGCGGCGGCGACAAGGGAAG
CCGATGGCCATGGCGACCTCCACCTTCTCCCCCCCGGCCTCGCAGCTCTCCCTCACCCGC
CGCCGCCTCCACCCGGGCCCCGACCTCCTCACCCTCTCCTCCCCGCGCCTCCGCGCCGGC
CTCCGCCTCGCCCGCGCCGCCGCCGGGGAGGCCCCCGTGGAGACTGTCGAGGCGCCGCCG
AGCAAGCCGGAGGCCGAGCCGTCCCCCGCTGCGTCCAACGGGGCCGCCGTCAAGGCCGAG
AAGCCGCCGGCGGCGGCGGCGGCGCCCCCGCTGCCCAAGTTCCGGGACTCGAGGTGGGTC
AACGGGACGTGGGACCTCAGGCAGTTCGAGAAGGGCGGCGCCGTCGACTGGGACGCCGTC
ATAGACGCCGAGGCCAGGAGAAGGAAATGGCTTGAAGATTGTCCAGAGGCAACTAGCCCT
GACGAGGCCGTTGTCTTCGATACTTCAATCATACCGTGGTGGGCATGGATGAAGCGTTTC
CATCTCCCTGAAGCCGAGAAGCTAAATGGCCGTGCTGCCATGATTGGCTTCTTCATGGCA
TACTTTGTTGATAGCTTGACCGGCGTGGGGCTTGTCGACCAGATGGGCAACTTCTTCTGC
AAAACCCTACTGTTTGTTGCTGTGGCTGGTGTGCTGCTGGTCAGGAAAAACGAGGACATA
GAGACAGTGAAGAAGCTCATCGATGAGACGACGTTCTACGACAAGCAATGGCAGGCAACC
TGGCAAGATGAGTCCCCTTCTCAGCCCAAGAAATAGCTCTGAAGTGGAATCTGAATCTGA
ATCCTCCCTATGTTGTATTGTATCACTTCTTTTTGCAGCCCTTTTCTCAACCCATTTATT
AGTGAGGCTCAGTACATTTTGATGATCTTAATACCTATGACGTCTTGTAAAAAGTACGAA
CTCGTTTCTGTGCTAGAGGTTAACGTTGCTGCGGGTTACTTGGTTGAATGTTTTCTTTGT
GAGAATTGCTTGTACTAGTTACTCCCTCCGCTTCATATTATAAAATGCTTTGACTCTTTT
CTAAAAAAAAAAAAA
clustalw multiple alignements is not computed in this case