cluster # 9422

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Oryza sativa
cluster # 9422 cluster # 9422 Sequences # 6 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9422#0 length = 680 sequences # 6
consensusID : consensus_9422#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 680
fasta sequence
                              [TCTCCACTGTCAACCACGCCGCCGCCGCCGCCGCCGCCGCAGCGGG-GCCGGGGAAATCCTTCTCCGCGGCTGCGCCTGCGGCGCCATCGGTGCGCCTGCCAAGGACAC-GGGCTCCTGCTGCCGCCGCGGTGTCCGCGGCGGCTGTGGGGGCGGACCGCGCGGCGGACAGGGTGTCGGCGCTGAGCCAGGTCTCCGGGGTGCTGGGGTCGCAGTGGGGCGACGAGGGGAAGGGGAAGCTCGTCGACGTGCTCGCCCCTCGCTTCGACATCGTCGCGCGTTGCCAGGGCGGAGCAAATGCTGGACACACCATTTACAATTCTGAAGGAAAGAAATTTGCTCTTCATCTTGTTCCATCTGGTATTCTCCATGAAGGAACGCTGTGTGTTGTTGGCAATGGAGCGGTGATCCATGTTCCAGGATTTTTTAATGAAATTGATGGTCTTGAATCCAATGGAGTCAATTGCAATGGAAGAATATTGGTCTCTGACCGGGCACATTTACTCTTTGATCTGCATCAGGCTGTAGATGGACTTAGGGAAGCAGA-CTTGCTAATTCCTTTATAGGGACG-CTAAGAGAGGCATTGGACCATGTTATTCCAGCAA-GNCACTCGAACGG-CTGCGAGCTGTGATCTAGGN-CATGG-CACTTTNGGGTAGCTTATGCTTGTTAANATGCACTCAAGG]

[+] EMBL AU163408             [TCTCCACTGTCAACCACGCCGCCGCCGCCGCCGCCGCCGCAGCGGGTGCCGGGGAAATCCTTCTCCGCGGCTGCGCCTGCGG GCAGTCGGTGCGCCTGCCAAGGACAC GGGNTCCTGCTGCNGCCGCGGTGTCCGGGGTNGNTG NGGGGCGGACCGCNCGGCGGACAGGGTGTCGGCGCTGAGCCAGGTCTCCGGGGTGCTGGGGTCGCAGTGGGGCGACGAGGGGAAGGGGAAGCTCGTCGACGTGCTCGCCCCTCGCTTCGACATCNTCGCGCGTTGCCAGGGCGGANAAAATGCTGGACACACCATTTACAATTCTAAAGGAAAGAAATTTGCTCTTCATCTTGTTCCATCTGGTATTCTCCATG                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CB640507             [    CACTGTCAACCACGCCGCCGCCGCCGCCGCCGCCGCAGCGGG GCCGGGGAAATCCTTCTCCGCGGCTGCGCCTGCGGCGCCATCGGTGCGCCTGCCAAGGACAC GGGCTCCTGCTGCCGCCGCGGTGTCCGCGGCGGCTGTGGGGGCGGACCGCGCGGCGGACAGGGTGTCGGCGCTGAGCCAGGTCTCCGGGGTGCTGGGGTCGCAGTGGGGCGACGAGGGGAAGGGGAAGCTCGTCGACGTGCTCGCCCCTCGCTTCGACATCGTCGCGCGTTGCCAGGGCGGAGCAAATGCTGGACACACCATTTACAATTCTGAAAGAAAGAAATTTGCTCTTCATCTTGTTCCATCTGGTATTCTCCATGAAAGAA                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL AU166462             [      CTGTCAACCACGCCGCCGCCGCCGCCGCCGCCGCAGCGGG GCCGGGGAAATCCTTCTCCGCGGCTGCGCCTGCGGCGCCATCGGTGCGCCTGCCAAGGACACAGGGCTCCTGCTGCCGCCGCGGTGTCCGCGGCGGCTGTGGGGGCGGACCGCGCGGCGGACAGGGTGTCGGCGCTGAGCCAGGTCTCCGGGGTGCTGGGGTCGCAGTGGGGCGACGAGGGGAAGGGGAAGCTCGTCGACGTGCTCGCCCCTCGCTTCGACATCGTCGCGCGTTGCCAGGGCGGAGCAAATGCTGGACACACCATTTACAATTCTGAAGGAAAGAAATTTGCTCTTCATCTTGTTCCATCTGGTATTCTCCATGAAGGAACGCTGTGTGTTGTTGGCAATGGAGCGGTGATCCATGTTCCAGGATTTTTTAATGAAATTGATGGTCTTGAATCCAATG                                                                                                                                                                                                                                         ]
[+] EMBL AU058383             [                                                                                                                                                                                                                                                                                                              GACACACCATTTACAATTCTGAAGGAAAGAAATTTGCTCTTCATCTTGTTCCATCTGGTATTCTCCATGAAGGAACGCTGTGTGTTGTTGGCAATGGAGCGGTGATCCATGTTCCAGGATTTTTTAATGAAATTGATGGTCTTGAATCCAATGGAGTCAATTGCAATGGAAGAATATTGGTCTCTGACCGGGCACATTTACTCTTTGATCTGCATCAGGCTGTAGATGGACTTAGGGAAGCANA CTTGCTAATTCCTTTATAGGGACG CTAAGAGAGGCATTGGACCATGTTATTCCAGCAA GNCACTCGAACGG CTGCGAGCTGTGATCTAGGN CATGG CACTTTNGGGTAGCTTATG                     ]
[+] EMBL C74794               [                                                                                                                                                                                                                                                                                                              GACACACCATTTACAATTCTGAAGGAAAGAAATTTGCTCTTCATCTTGTTCCATCTGGTATTCTCCATGAAGGAACGCTGTGTGTTGTTGGCAATGGAGCGGTGATCCATGTTCCAGGATTTTTTAATGAAATTGATGGTCTTGAATCCAATGGAGTCAATTGCAATGGAAGAATATTGGTCTCTGANCGGGCACATTTACTCTTTGATCTGCATCAGGCTGTAGATGGACTTAGGGAAGCAGAGCTTGCTAATTCCTTTATAGGGACGACTAAGAGAGGCATTGGACCATGTAATTCCAGCAG GGCACTCGAAC                                                                      ]
[+] EMBL AU058429             [                                                                                                                                                                                                                                                                                                               ACACACCATTTACAATTCTGNAGGAAAGAAATTTGCTCTTCATCTTGTTCCATCTGGTATTCTCCATGAAGGAACGCTGTGTGTTGTTGGCAATGGAGCGGTGATCCATGTTCCAGGATTTTTTAATGAAATTGATGGTCTTGAATCCAATGGAGTCAATTGCAATGGAAGAATATTGGTCTCTGACCGGGCACATTTACTCTTTGATCTGCATCAGGCTGTAGATGGACTTAGGGAAGCAGA CTTGCTAATTCCTTTATAGGGACGACTAAGAG GGCATTGGACCATGTTATTCCAGCAANGTCACTCGAACGGACTGCGAGCTGTGATCTAAGNACATGGACACTTTGGGATAGCTGATGCTTGTTAANATGCACTCAAGG]




>consensus_9422#0
TCTCCACTGTCAACCACGCCGCCGCCGCCGCCGCCGCCGCAGCGGGGCCGGGGAAATCCT
TCTCCGCGGCTGCGCCTGCGGCGCCATCGGTGCGCCTGCCAAGGACACGGGCTCCTGCTG
CCGCCGCGGTGTCCGCGGCGGCTGTGGGGGCGGACCGCGCGGCGGACAGGGTGTCGGCGC
TGAGCCAGGTCTCCGGGGTGCTGGGGTCGCAGTGGGGCGACGAGGGGAAGGGGAAGCTCG
TCGACGTGCTCGCCCCTCGCTTCGACATCGTCGCGCGTTGCCAGGGCGGAGCAAATGCTG
GACACACCATTTACAATTCTGAAGGAAAGAAATTTGCTCTTCATCTTGTTCCATCTGGTA
TTCTCCATGAAGGAACGCTGTGTGTTGTTGGCAATGGAGCGGTGATCCATGTTCCAGGAT
TTTTTAATGAAATTGATGGTCTTGAATCCAATGGAGTCAATTGCAATGGAAGAATATTGG
TCTCTGACCGGGCACATTTACTCTTTGATCTGCATCAGGCTGTAGATGGACTTAGGGAAG
CAGACTTGCTAATTCCTTTATAGGGACGCTAAGAGAGGCATTGGACCATGTTATTCCAGC
AAGNCACTCGAACGGCTGCGAGCTGTGATCTAGGNCATGGCACTTTNGGGTAGCTTATGC
TTGTTAANATGCACTCAAGG
clustalw multiple alignements is not computed in this case