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Oryza sativa
cluster # 9596 cluster # 9596       Sequences # 6       consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9596#0 length = 1774 sequences # 4  
 consensus_9596#1 length = 1384 sequences # 2  
consensusID : consensus_9596#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1774
fasta sequence 
                              [CCCATTCCGTTGATGAGCCTCTACCTTCTCAGTATCAATTTAGAGCATTCCTTGGTGCAAGATCCATCATGCTCGACGACGTCGACGACGAGCCTTTCGCCGATGGCATCTCGAGCCCGATAGCGCA-NACATCTATGACTTCTGCGACGACGGCAACGGCGGCGACCTCTTCGCGGCGGTGAACGCGGCGGCGGCGGCAGGGTCGGACATGTTCACGGCCTCCTCGGAGGACGCGTCCGCCTCGTCGTCGTCGACGGCCACCGCGCCCATCGCCGGCGG-GGCGACACCCTGTCGCCGCNGTTGCCGTCGCTGGACTCCACGCTCTCGGCTCTCCTCGAGCAAGACGAGCCGCCCGGCGCCGACGGCGAGCTCCTCCTCCCCATCGACGACTACGCGTTCTCCGCCGTCGACGAGACGCAGCCACCACCACCACCGGAGCATCAGCAGCAGCAGCAATTCACCCAGATGCCTCTCCCGGTGATGGGCGGCGCGGCGGCGGAGCACCCGGCGCTGCAGGCGCAGCTGAGCAGCACCGCCACCGAGCTGATGCAGTACGCCGGGTTCACCGACGAGGTCTTCGCGGCGGCGTTGGCCGCTGGAGCCGGAGCTGGGGCGGGAGGGTACATGGGCCTGGACGACCCGCTCTGCCCGCAGCAGCAGCATTCCGGCGCGATGCTCCCCGCCGCCGCCGCCGCCGCCGGCGAGGCGTTCTTCAGCAAGGACGCGCACGCGGCGCAGGCCGCCTTCTTCGCCGCGGCCGGCGGCGGCGGCGGAAGCATGGTGATGTCGATGATGGGAATGGACGAGATCGGCGAGTACCAGCGGATGATGGAATGCGGCGGCGCGCTTCTCGGCGCCACCCACGCCGCCGACGGCGCCGACATGGCCTTCGGCAACGCCGCCGCCGCAGAGTTGCAGATGGGCGGAGGCGGGAGTAGCCCAGCGCGGCTGCCGGCGACGGGGACGACGGAGACGACGAGCTTGGAGGACACGAGCTTCAAGACCGTCCGCCTCTCCAACGAGGAGAGGAAGGAAAAGATCCACAGGTACATCAAGAAGAGGAACGAGAGGAATTTCAGCAAGAAGATCAAGTACGCTTGCAGAAAAACCCTCGCGGATAGCCGGCCTCGCGTCCGTGGTAGGTTCGCCAAGAACGACGACTACTGCGAGGCATCCAGGTCGATCGGCTCGCAGAATCACGAAGAGTATGAACAAATTGGCGGCGTGAAGGGAGAAGACATGCTTGATTCTGACGCTCTAGCGCATATCAGCGGGATGAGCTCATACATGTACAATCACACAGTGGAATCCTGGATATAAACTCATACGACACAGCACTGAGAAACTCTCTCGAATTGCTTTTTCTTTTTTTTTCCACCCTATTTTGTGCAGATTTAACCGGTCCTTTACTTCAAACCTCTGAATAATTTTGTAGAAATTTGATGTATGTTGATCAGCTGGAGTTGCTGTAGGGTCGGTCTGTTGTCATATCAATCTGCTTTTCACTTGTTTGTCATTCTTGCAGGTGAATGAAATAGATAGAGTTAATTTGCATAATTTGTATAGATACAAATGTCGTGTGTACTTAACGATGTTAGAAGGCATTTTGAAATGCCTAGTATGTTTTGAGGTGGTCCTGGAAACGGTTGAGAAAATTGGAGCAGGGAAAATCAATATAGATTTAGGCCTTTAGCAATCTGAGGGTGTAAAGGAAAAGGATATATTTGCAAATGTTTGACGGTATAATACCTCTATATGAATATATTATACTATT]

[+] EMBL AU162177             [CCCATTCCGTTGATGAGCCTCTACCTTCTCAGTATCAATTTAGAGCATTCCTTGGTGCAAGATCCATCATGCTCGACGACGTCGACGACGAGCCTTTCGCCGATGGCATCTCGAGCCCGATAGCGCA NACATCTATGACTTCTGCGACGACGGCAACGGCGGCGACCTCTTCGCGGCGGTGAACGCGGCGGCGGCGGCAGGGTCGGACATGTTCACGGCCTCCTCGGAGGACGCGTCCGCCTCGTCGTCGTCGACGGCCACCGCGCCCATCGCAGGNAG NGCGACACCCTGTCGCCGCNATNGCCGTCGCTGGACTCCACGCTCTCGGCTCTCCTCGAGCAAGACGAGCCGCCCGGCGCCGACNG GAGCTCCTCCTCCCCAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL AU163591             [    TTCCGTTGATGAGCCTCTACCTTCTCAGTATCAATTTAGAGCATTCCTTGGTGCAAGATCCATCATGCTCGACGACGTCGACGACGAGCCTTTCGCCGATGGCATCTCGAGCCCGATAGCGCA NACATCTATGACTTCTGCGACGACGGCAACGGCGGCGACCTCTTCGCGGCGGTGAACGCGGCGGCGGCGGCAGGGTCGGACATGTTCACGGCCTCCTCGGAGGACGCGTCCGCCTCGTCGTCGTCGACGGCCACCGCGCCCATCGCCGGCGG GGCGACACCCTGTCGCGG  GTTGCCGTCGCTGGACTCCACGCTCTCGGCTCTCCTCGAGCAAGACGAGCCG CCGGCGCCGANGGGAAGCTCCTCCTTCCCATCGACGAATANGCGTTCTCCGCCGTCGACGAGANGCAAGCAACAACAACAACGGAGAATTAGAAGaa                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL BP184570             [      CCGTTGATGAGCCTCTACCTTCTCAGTATCAATTTAGAGCATTCCTTGGTGCAAGATCCATCATGCTCGACGACGTCGACGACGAGCCTTTCGCCGATGGCATCTCGAGCCCGATAGCGCAGCACATCTATGACTTCTGCGACGACGGCAACGGCGGCGACCTCTTCGCGGCGGTGAACGCGGCGGCGGCGGCAGGGTCGGACATGTTCACGGCCTCCTCGGAGGACGCGTCCGCCTCGTCGTCGTCGACGGCCACCGCGCCCATCGCCGGCGGCGGCGACACCCTGTCGCCGCCGCTGCCGTCGCTGGACTCCACGCTCTCGGCTCTCCTCGAGCAAGACGAGCCGCCCGGCGCCGACGGCGAGCTCCTCCTCCCCATCGACGACTACGCGTTCTCCGCCGTCGACGAGACGCAGCCACCACCACCACCGGAGCATCAGCAGCAGCAGCAATTCACCCAGATGCCTCTCCCGGTGATGGGCGGCGCGGCGGCGGAGCACCCGGCGCTGCAGGCGCAGCTGAGCAGCACCGCCACCGAGCTGATGCAGTACGCCGGGTTCACCGACGAGGTCTTCGCGGCGGCGTTGGCCGCTGGAGCCGGAGCTGGGGCGGGAGGGTACATGGGCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL AK069224             [                                                                                                                                                                                                                                                                                                                                                               CGCCCGGCGCCGACGGCGAGCTCCTCCTCCCCATCGACGACTACGCGTTCTCCGCCGTCGACGAGACGCAGCCACCACCACCACCGGAGCATCAGCAGCAGCAGCAATTCACCCAGATGCCTCTCCCGGTGATGGGCGGCGCGGCGGCGGAGCACCCGGCGCTGCAGGCGCAGCTGAGCAGCACCGCCACCGAGCTGATGCAGTACGCCGGGTTCACCGACGAGGTCTTCGCGGCGGCGTTGGCCACTGGAGCCGGAGCTGGGGCGGGAGGGTACATGGGCCTGGACGACCCGCTCTGCCCGCAGCAGCAGCATTCCGGCGCGATGCTCCCCGCCGCCGCCGCCGCCGCCGGCGAGGCGTTCTTCAGCAAGGACGCGCACGCGGCGCAGGCCGCCTTCTTCGCCGCGGCCGGCGGCGGCGGCGGAAGCATGGTGATGTCGATGATGGGAATGGACGAGATCGGCGAGTACCAGCGGATGATGGAATGCGGCGGCGCGCTTCTCGGCGCCACCCACGCCGCCGACGGCGCCGACATGGCCTTCGGCAACGCCGCCGCCGCAGAGTTGCAGATGGGCGGAGGCGGGAGTAGCCCAGCGCGGCTGCCGGCGACGGGGACGACGGAGACGACGAGCTTGGAGGACACGAGCTTCAAGACCGTCCGCCTCTCCAACGAGGAGAGGAAGGAAAAGATCCACAGGTACATCAAGAAGAGGAACGAGAGGAATTTCAGCAAGAAGATCAAGTACGCTTGCAGAAAAACCCTCGCGGATAGCCGGCCTCGCGTCCGTGGTAGGTTCGCCAAGAACGACGACTACTGCGAGGCATCCAGGTCGATCGGCTCGCAGAATCACGAAGAGTATGAACAAATTGGCGGCGTGAAGGGAGAAGACATGCTTGATTCTGACGCTCTAGCGCATATCAGCGGGATGAGCTCATACATGTACAATCACACAGTGGAATCCTGGATATAAACTCATACGACACAGCACTGAGAAACTCTCTCGAATTGCTTTTTCTTTTTTTTTCCACCCTATTTTGTGCAGATTTAACCGGTCCTTTACTTCAAACCTCTGAATAATTTTGTAGAAATTTGATGTATGTTGATCAGCTGGAGTTGCTGTAGGGTCGGTCTGTTGTCATATCAATCTGCTTTTCACTTGTTTGTCATTCTTGCAGGTGAATGAAATAGATAGAGTTAATTTGCATAATTTGTATAGATACAAATGTCGTGTGTACTTAACGATGTTAGAAGGCATTTTGAAATGCCTAGTATGTTTTGAGGTGGTCCTGGAAACGGTTGAGAAAATTGGAGCAGGGAAAATCAATATAGATTTAGGCCTTTAGCAATCTGAGGGTGTAAAGGAAAAGGATATATTTGCAAATGTTTGACGGTATAATACCTCTATATGAATATATTATACTATT]




>consensus_9596#0
CCCATTCCGTTGATGAGCCTCTACCTTCTCAGTATCAATTTAGAGCATTCCTTGGTGCAA
GATCCATCATGCTCGACGACGTCGACGACGAGCCTTTCGCCGATGGCATCTCGAGCCCGA
TAGCGCANACATCTATGACTTCTGCGACGACGGCAACGGCGGCGACCTCTTCGCGGCGGT
GAACGCGGCGGCGGCGGCAGGGTCGGACATGTTCACGGCCTCCTCGGAGGACGCGTCCGC
CTCGTCGTCGTCGACGGCCACCGCGCCCATCGCCGGCGGGGCGACACCCTGTCGCCGCNG
TTGCCGTCGCTGGACTCCACGCTCTCGGCTCTCCTCGAGCAAGACGAGCCGCCCGGCGCC
GACGGCGAGCTCCTCCTCCCCATCGACGACTACGCGTTCTCCGCCGTCGACGAGACGCAG
CCACCACCACCACCGGAGCATCAGCAGCAGCAGCAATTCACCCAGATGCCTCTCCCGGTG
ATGGGCGGCGCGGCGGCGGAGCACCCGGCGCTGCAGGCGCAGCTGAGCAGCACCGCCACC
GAGCTGATGCAGTACGCCGGGTTCACCGACGAGGTCTTCGCGGCGGCGTTGGCCGCTGGA
GCCGGAGCTGGGGCGGGAGGGTACATGGGCCTGGACGACCCGCTCTGCCCGCAGCAGCAG
CATTCCGGCGCGATGCTCCCCGCCGCCGCCGCCGCCGCCGGCGAGGCGTTCTTCAGCAAG
GACGCGCACGCGGCGCAGGCCGCCTTCTTCGCCGCGGCCGGCGGCGGCGGCGGAAGCATG
GTGATGTCGATGATGGGAATGGACGAGATCGGCGAGTACCAGCGGATGATGGAATGCGGC
GGCGCGCTTCTCGGCGCCACCCACGCCGCCGACGGCGCCGACATGGCCTTCGGCAACGCC
GCCGCCGCAGAGTTGCAGATGGGCGGAGGCGGGAGTAGCCCAGCGCGGCTGCCGGCGACG
GGGACGACGGAGACGACGAGCTTGGAGGACACGAGCTTCAAGACCGTCCGCCTCTCCAAC
GAGGAGAGGAAGGAAAAGATCCACAGGTACATCAAGAAGAGGAACGAGAGGAATTTCAGC
AAGAAGATCAAGTACGCTTGCAGAAAAACCCTCGCGGATAGCCGGCCTCGCGTCCGTGGT
AGGTTCGCCAAGAACGACGACTACTGCGAGGCATCCAGGTCGATCGGCTCGCAGAATCAC
GAAGAGTATGAACAAATTGGCGGCGTGAAGGGAGAAGACATGCTTGATTCTGACGCTCTA
GCGCATATCAGCGGGATGAGCTCATACATGTACAATCACACAGTGGAATCCTGGATATAA
ACTCATACGACACAGCACTGAGAAACTCTCTCGAATTGCTTTTTCTTTTTTTTTCCACCC
TATTTTGTGCAGATTTAACCGGTCCTTTACTTCAAACCTCTGAATAATTTTGTAGAAATT
TGATGTATGTTGATCAGCTGGAGTTGCTGTAGGGTCGGTCTGTTGTCATATCAATCTGCT
TTTCACTTGTTTGTCATTCTTGCAGGTGAATGAAATAGATAGAGTTAATTTGCATAATTT
GTATAGATACAAATGTCGTGTGTACTTAACGATGTTAGAAGGCATTTTGAAATGCCTAGT
ATGTTTTGAGGTGGTCCTGGAAACGGTTGAGAAAATTGGAGCAGGGAAAATCAATATAGA
TTTAGGCCTTTAGCAATCTGAGGGTGTAAAGGAAAAGGATATATTTGCAAATGTTTGACG
GTATAATACCTCTATATGAATATATTATACTATT

consensusID : consensus_9596#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1384
fasta sequence 
                              [CTCCTCTTCAAATTCCCATTCCGTTGATGAGCCTCTACCTTCTCAGTATCAATTTAGAGCATTCCTTGGTGCAAGATCCATCATGCTCGACGACGTCGACGACGAGCCTTTCGCCGATGGCATCTCGAGCCCGATAGCGCAGCACATCTATGACTTCTGCGACGACGGCAACGGCGGCGACCTCTTCGCGGCGGTGAACGCGGCGGCGGCGGCAGGGTCGGACATGTTCACGGCCTCCTCGGAGGACGCGTCCGCCTCGTCGTCGTCGACGGCCACCGCGCCCATCGCCGGCGGCGGCGACACCCTGTCGCCGCCGCTGCCGTCGCTGGACTCCACGCTCTCGGCTCTCCTCGAGCAAGACGAGCCGCCCGGCGCCGGCGGCGGCGGAAGCATGGTGATGTCGATGATGGGAATGGACGAGATCGGCGAGTACCAGCGGATGATGGAATGCGGCGGCGCGCTTCTCGGCGCCACCCACGCCGCCGACGGCGCCGACATGGCCTTCGGCAACGCCGCCGCCGCAGAGTTGCAGATGGGCGGAGGCGGGAGTAGCCCAGCGCGGCTGCCGGCGACGGGGACGACGGAGACGACGAGCTTGGAGGACACGAGCTTCAAGACCGTCCGCCTCTCCAACGAGGAGAGGAAGGAAAAGATCCACAGGTACATCAAGAAGAGGAACGAGAGGAATTTCAGCAAGAAGATCAAGTACGCTTGCAGAAAAACCCTCGCGGATAGCCGGCCTCGCGTCCGTGGTAGGTTCGCCAAGAACGACGACTACTGCGAGGCATCCAGGTCGATCGGCTCGCAGAATCACGAAGAGTATGAACAAATTGGCGGCGTGAAGGGAGAAGACATGCTTGATTCTGACGCTCTAGCGCATATCAGCGGGATGAGCTCATACATGTACAATCACACAGTGGAATCCTGGATATAAACTCATACGACACAGCACTGAGAAACTCTCTCGAATTGCTTTTTCTTTTTTTTTCCACCCTATTTTGTGCAGATTTAACCGGTCCTTTACTTCAAACCTCTGAATAATTTTGTAGAAATTTGATGTATGTTGATCAGCTGGAGTTGCTGTAGGGTCGGTCTGTTGTCATATCAATCTGCTTTTCACTTGTTTGTCATTCTTGCAGGTGAATGAAATAGATAGAGTTAATTTGCATAATTTGTATAGATACAAATGTCGTGTGTACTTAACGATGTTAGAAGGCATTTTGAAATGCCTAGTATGTTTTGAGGTGGTCCTGGAAACGGTTGAGAAAATTGGAGCAGGGAAAATCAATATAGATTTAGGCCTTTAGCAATCTGAGGGTGTAAAGGAAAAGGATATATTTGCAAATGTTTGACGGTATAATACCTCTATATGAATATATTATAC]

[+] EMBL AK100335             [CTCCTCTTCAAATTCCCATTCCGTTGATGAGCCTCTACCTTCTCAGTATCAATTTAGAGCATTCCTTGGTGCAAGATCCATCATGCTCGACGACGTCGACGACGAGCCTTTCGCCGATGGCATCTCGAGCCCGATAGCGCAGCACATCTATGACTTCTGCGACGACGGCAACGGCGGCGACCTCTTCGCGGCGGTGAACGCGGCGGCGGCGGCAGGGTCGGACATGTTCACGGCCTCCTCGGAGGACGCGTCCGCCTCGTCGTCGTCGACGGCCACCGCGCCCATCGCCGGCGGCGGCGACACCCTGTCGCCGCCGCTGCCGTCGCTGGACTCCACGCTCTCGGCTCTCCTCGAGCAAGACGAGCCGCCCGGCGCCGGCGGCGGCGGAAGCATGGTGATGTCGATGATGGGAATGGACGAGATCGGCGAGTACCAGCGGATGATGGAATGCGGCGGCGCGCTTCTCGGCGCCACCCACGCCGCCGACGGCGCCGACATGGCCTTCGGCAACGCCGCCGCCGCAGAGTTGCAGATGGGCGGAGGCGGGAGTAGCCCAGCGCGGCTGCCGGCGACGGGGACGACGGAGACGACGAGCTTGGAGGACACGAGCTTCAAGACCGTCCGCCTCTCCAACGAGGAGAGGAAGGAAAAGATCCACAGGTACATCAAGAAGAGGAACGAGAGGAATTTCAGCAAGAAGATCAAGTACGCTTGCAGAAAAACCCTCGCGGATAGCCGGCCTCGCGTCCGTGGTAGGTTCGCCAAGAACGACGACTACTGCGAGGCATCCAGGTCGATCGGCTCGCAGAATCACGAAGAGTATGAACAAATTGGCGGCGTGAAGGGAGAAGACATGCTTGATTCTGACGCTCTAGCGCATATCAGCGGGATGAGCTCATACATGTACAATCACACAGTGGAATCCTGGATATAAACTCATACGACACAGCACTGAGAAACTCTCTCGAATTGCTTTTTCTTTTTTTTTCCACCCTATTTTGTGCAGATTTAACCGGTCCTTTACTTCAAACCTCTGAATAATTTTGTAGAAATTTGATGTATGTTGATCAGCTGGAGTTGCTGTAGGGTCGGTCTGTTGTCATATCAATCTGCTTTTCACTTGTTTGTCATTCTTGCAGGTGAATGAAATAGATAGAGTTAATTTGCATAATTTGTATAGATACAAATGTCGTGTGTACTTAACGATGTTAGAAGGCATTTTGAAATGCCTAGTATGTTTTGAGGTGGTCCTGGAAACGGTTGAGAAAATTGGAGCAGGGAAAATCAATATAGATTTAGGCCTTTAGCAATCTGAGGGTGTAAAGGAAAAGGATATATTTGCAAATGTTTGACGGTATAATACCTCTATATGAATATATTATAC]
[+] EMBL AU162178             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 TAGGTTCGCCAAGAACGACGACTACTGCGAGGCATCCAGGTCGATCGGCTCGCAGAATCACGAAGAGTATGAACNAATTGGCGGCGTGAAGGGAGAAGACATGCTTGATTCTGACGCTCTAGCGCATATCAGCGGGATGAGCTCATACATGTACAATCACACAGTGGAATCCTGGATATAAACTCATACGACACAGCACTGAGAAACTCTCTCGAATTGCTTTNTCTTTTNTTTTCCACCCTATTTTGTGCAGATTTAACCGGTCCTTTACTTCAAACCTCTGAATAATTTTGTAGAAATTTGATGTATGTTGATCAGCTGGAGTTGCTGTAGGGTCGGTCTGTTGTCATATCAATCTGCTTTTCACTTGTTTGTCATTCTTGCAGGTGAATGAAATAGATAGAGTTAATTTGCATAATTTGTATAAAAAAAAAa                                                                                                                                                                                                    ]




>consensus_9596#1
CTCCTCTTCAAATTCCCATTCCGTTGATGAGCCTCTACCTTCTCAGTATCAATTTAGAGC
ATTCCTTGGTGCAAGATCCATCATGCTCGACGACGTCGACGACGAGCCTTTCGCCGATGG
CATCTCGAGCCCGATAGCGCAGCACATCTATGACTTCTGCGACGACGGCAACGGCGGCGA
CCTCTTCGCGGCGGTGAACGCGGCGGCGGCGGCAGGGTCGGACATGTTCACGGCCTCCTC
GGAGGACGCGTCCGCCTCGTCGTCGTCGACGGCCACCGCGCCCATCGCCGGCGGCGGCGA
CACCCTGTCGCCGCCGCTGCCGTCGCTGGACTCCACGCTCTCGGCTCTCCTCGAGCAAGA
CGAGCCGCCCGGCGCCGGCGGCGGCGGAAGCATGGTGATGTCGATGATGGGAATGGACGA
GATCGGCGAGTACCAGCGGATGATGGAATGCGGCGGCGCGCTTCTCGGCGCCACCCACGC
CGCCGACGGCGCCGACATGGCCTTCGGCAACGCCGCCGCCGCAGAGTTGCAGATGGGCGG
AGGCGGGAGTAGCCCAGCGCGGCTGCCGGCGACGGGGACGACGGAGACGACGAGCTTGGA
GGACACGAGCTTCAAGACCGTCCGCCTCTCCAACGAGGAGAGGAAGGAAAAGATCCACAG
GTACATCAAGAAGAGGAACGAGAGGAATTTCAGCAAGAAGATCAAGTACGCTTGCAGAAA
AACCCTCGCGGATAGCCGGCCTCGCGTCCGTGGTAGGTTCGCCAAGAACGACGACTACTG
CGAGGCATCCAGGTCGATCGGCTCGCAGAATCACGAAGAGTATGAACAAATTGGCGGCGT
GAAGGGAGAAGACATGCTTGATTCTGACGCTCTAGCGCATATCAGCGGGATGAGCTCATA
CATGTACAATCACACAGTGGAATCCTGGATATAAACTCATACGACACAGCACTGAGAAAC
TCTCTCGAATTGCTTTTTCTTTTTTTTTCCACCCTATTTTGTGCAGATTTAACCGGTCCT
TTACTTCAAACCTCTGAATAATTTTGTAGAAATTTGATGTATGTTGATCAGCTGGAGTTG
CTGTAGGGTCGGTCTGTTGTCATATCAATCTGCTTTTCACTTGTTTGTCATTCTTGCAGG
TGAATGAAATAGATAGAGTTAATTTGCATAATTTGTATAGATACAAATGTCGTGTGTACT
TAACGATGTTAGAAGGCATTTTGAAATGCCTAGTATGTTTTGAGGTGGTCCTGGAAACGG
TTGAGAAAATTGGAGCAGGGAAAATCAATATAGATTTAGGCCTTTAGCAATCTGAGGGTG
TAAAGGAAAAGGATATATTTGCAAATGTTTGACGGTATAATACCTCTATATGAATATATT
ATAC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9596#0      --------------CCCATTCCGTTGATGAGCCTCTACCTTCTCAGTATCAATTTAGAGC 46
consensus_9596#1      CTCCTCTTCAAATTCCCATTCCGTTGATGAGCCTCTACCTTCTCAGTATCAATTTAGAGC 60
                                    **********************************************

consensus_9596#0      ATTCCTTGGTGCAAGATCCATCATGCTCGACGACGTCGACGACGAGCCTTTCGCCGATGG 106
consensus_9596#1      ATTCCTTGGTGCAAGATCCATCATGCTCGACGACGTCGACGACGAGCCTTTCGCCGATGG 120
                      ************************************************************

consensus_9596#0      CATCTCGAGCCCGATAGCGCAN-ACATCTATGACTTCTGCGACGACGGCAACGGCGGCGA 165
consensus_9596#1      CATCTCGAGCCCGATAGCGCAGCACATCTATGACTTCTGCGACGACGGCAACGGCGGCGA 180
                      *********************  *************************************

consensus_9596#0      CCTCTTCGCGGCGGTGAACGCGGCGGCGGCGGCAGGGTCGGACATGTTCACGGCCTCCTC 225
consensus_9596#1      CCTCTTCGCGGCGGTGAACGCGGCGGCGGCGGCAGGGTCGGACATGTTCACGGCCTCCTC 240
                      ************************************************************

consensus_9596#0      GGAGGACGCGTCCGCCTCGTCGTCGTCGACGGCCACCGCGCCCATCGCCGGCGG-GGCGA 284
consensus_9596#1      GGAGGACGCGTCCGCCTCGTCGTCGTCGACGGCCACCGCGCCCATCGCCGGCGGCGGCGA 300
                      ****************************************************** *****

consensus_9596#0      CACCCTGTCGCCGCNGTTGCCGTCGCTGGACTCCACGCTCTCGGCTCTCCTCGAGCAAGA 344
consensus_9596#1      CACCCTGTCGCCGCCGCTGCCGTCGCTGGACTCCACGCTCTCGGCTCTCCTCGAGCAAGA 360
                      ************** * *******************************************

consensus_9596#0      CGAGCCGCCCGGCGCCGACGGCGAGCTCCTCCTCCCCATCGACGACTACGCGTTCTCCGC 404
consensus_9596#1      CGAGCCGCCCGGCGCCG------------------------------------------- 377
                      *****************                                           

consensus_9596#0      CGTCGACGAGACGCAGCCACCACCACCACCGGAGCATCAGCAGCAGCAGCAATTCACCCA 464
consensus_9596#1      ------------------------------------------------------------
                                                                                  

consensus_9596#0      GATGCCTCTCCCGGTGATGGGCGGCGCGGCGGCGGAGCACCCGGCGCTGCAGGCGCAGCT 524
consensus_9596#1      ------------------------------------------------------------
                                                                                  

consensus_9596#0      GAGCAGCACCGCCACCGAGCTGATGCAGTACGCCGGGTTCACCGACGAGGTCTTCGCGGC 584
consensus_9596#1      ------------------------------------------------------------
                                                                                  

consensus_9596#0      GGCGTTGGCCGCTGGAGCCGGAGCTGGGGCGGGAGGGTACATGGGCCTGGACGACCCGCT 644
consensus_9596#1      ------------------------------------------------------------
                                                                                  

consensus_9596#0      CTGCCCGCAGCAGCAGCATTCCGGCGCGATGCTCCCCGCCGCCGCCGCCGCCGCCGGCGA 704
consensus_9596#1      ------------------------------------------------------------
                                                                                  

consensus_9596#0      GGCGTTCTTCAGCAAGGACGCGCACGCGGCGCAGGCCGCCTTCTTCGCCGCGGCCGGCGG 764
consensus_9596#1      -----------------------------------------------------------G 378
                                                                                 *

consensus_9596#0      CGGCGGCGGAAGCATGGTGATGTCGATGATGGGAATGGACGAGATCGGCGAGTACCAGCG 824
consensus_9596#1      CGGCGGCGGAAGCATGGTGATGTCGATGATGGGAATGGACGAGATCGGCGAGTACCAGCG 438
                      ************************************************************

consensus_9596#0      GATGATGGAATGCGGCGGCGCGCTTCTCGGCGCCACCCACGCCGCCGACGGCGCCGACAT 884
consensus_9596#1      GATGATGGAATGCGGCGGCGCGCTTCTCGGCGCCACCCACGCCGCCGACGGCGCCGACAT 498
                      ************************************************************

consensus_9596#0      GGCCTTCGGCAACGCCGCCGCCGCAGAGTTGCAGATGGGCGGAGGCGGGAGTAGCCCAGC 944
consensus_9596#1      GGCCTTCGGCAACGCCGCCGCCGCAGAGTTGCAGATGGGCGGAGGCGGGAGTAGCCCAGC 558
                      ************************************************************

consensus_9596#0      GCGGCTGCCGGCGACGGGGACGACGGAGACGACGAGCTTGGAGGACACGAGCTTCAAGAC 1004
consensus_9596#1      GCGGCTGCCGGCGACGGGGACGACGGAGACGACGAGCTTGGAGGACACGAGCTTCAAGAC 618
                      ************************************************************

consensus_9596#0      CGTCCGCCTCTCCAACGAGGAGAGGAAGGAAAAGATCCACAGGTACATCAAGAAGAGGAA 1064
consensus_9596#1      CGTCCGCCTCTCCAACGAGGAGAGGAAGGAAAAGATCCACAGGTACATCAAGAAGAGGAA 678
                      ************************************************************

consensus_9596#0      CGAGAGGAATTTCAGCAAGAAGATCAAGTACGCTTGCAGAAAAACCCTCGCGGATAGCCG 1124
consensus_9596#1      CGAGAGGAATTTCAGCAAGAAGATCAAGTACGCTTGCAGAAAAACCCTCGCGGATAGCCG 738
                      ************************************************************

consensus_9596#0      GCCTCGCGTCCGTGGTAGGTTCGCCAAGAACGACGACTACTGCGAGGCATCCAGGTCGAT 1184
consensus_9596#1      GCCTCGCGTCCGTGGTAGGTTCGCCAAGAACGACGACTACTGCGAGGCATCCAGGTCGAT 798
                      ************************************************************

consensus_9596#0      CGGCTCGCAGAATCACGAAGAGTATGAACAAATTGGCGGCGTGAAGGGAGAAGACATGCT 1244
consensus_9596#1      CGGCTCGCAGAATCACGAAGAGTATGAACAAATTGGCGGCGTGAAGGGAGAAGACATGCT 858
                      ************************************************************

consensus_9596#0      TGATTCTGACGCTCTAGCGCATATCAGCGGGATGAGCTCATACATGTACAATCACACAGT 1304
consensus_9596#1      TGATTCTGACGCTCTAGCGCATATCAGCGGGATGAGCTCATACATGTACAATCACACAGT 918
                      ************************************************************

consensus_9596#0      GGAATCCTGGATATAAACTCATACGACACAGCACTGAGAAACTCTCTCGAATTGCTTTTT 1364
consensus_9596#1      GGAATCCTGGATATAAACTCATACGACACAGCACTGAGAAACTCTCTCGAATTGCTTTTT 978
                      ************************************************************

consensus_9596#0      CTTTTTTTTTCCACCCTATTTTGTGCAGATTTAACCGGTCCTTTACTTCAAACCTCTGAA 1424
consensus_9596#1      CTTTTTTTTTCCACCCTATTTTGTGCAGATTTAACCGGTCCTTTACTTCAAACCTCTGAA 1038
                      ************************************************************

consensus_9596#0      TAATTTTGTAGAAATTTGATGTATGTTGATCAGCTGGAGTTGCTGTAGGGTCGGTCTGTT 1484
consensus_9596#1      TAATTTTGTAGAAATTTGATGTATGTTGATCAGCTGGAGTTGCTGTAGGGTCGGTCTGTT 1098
                      ************************************************************

consensus_9596#0      GTCATATCAATCTGCTTTTCACTTGTTTGTCATTCTTGCAGGTGAATGAAATAGATAGAG 1544
consensus_9596#1      GTCATATCAATCTGCTTTTCACTTGTTTGTCATTCTTGCAGGTGAATGAAATAGATAGAG 1158
                      ************************************************************

consensus_9596#0      TTAATTTGCATAATTTGTATAGATACAAATGTCGTGTGTACTTAACGATGTTAGAAGGCA 1604
consensus_9596#1      TTAATTTGCATAATTTGTATAGATACAAATGTCGTGTGTACTTAACGATGTTAGAAGGCA 1218
                      ************************************************************

consensus_9596#0      TTTTGAAATGCCTAGTATGTTTTGAGGTGGTCCTGGAAACGGTTGAGAAAATTGGAGCAG 1664
consensus_9596#1      TTTTGAAATGCCTAGTATGTTTTGAGGTGGTCCTGGAAACGGTTGAGAAAATTGGAGCAG 1278
                      ************************************************************

consensus_9596#0      GGAAAATCAATATAGATTTAGGCCTTTAGCAATCTGAGGGTGTAAAGGAAAAGGATATAT 1724
consensus_9596#1      GGAAAATCAATATAGATTTAGGCCTTTAGCAATCTGAGGGTGTAAAGGAAAAGGATATAT 1338
                      ************************************************************

consensus_9596#0      TTGCAAATGTTTGACGGTATAATACCTCTATATGAATATATTATACTATT 1774
consensus_9596#1      TTGCAAATGTTTGACGGTATAATACCTCTATATGAATATATTATAC---- 1384
                      **********************************************


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)