cluster # 9628

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Oryza sativa
cluster # 9628 cluster # 9628 Sequences # 6 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9628#0 length = 1708 sequences # 4

consensus_9628#1 length = 691 sequences # 1
consensus_9628#2 length = 510 sequences # 1

consensusID : consensus_9628#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1708
fasta sequence

                              [TTGTTGATGGTGGAAGTAGTGATGAAGATGAGTCTACATCAAAGACTAAAAAGATACACATCAGGATACGTGATAAGCCTGCTGCATCTACTGTTGATGTTAACAAACTGAAAGAAGCCACTAAACAGCTAGGTTTAGGTCCTCCAATCACTAGGACAAGATCGTTATCAGGGACGCCTCAAGAGTTGAACCAGGCTCCTATGCAGCCGCCAGGTCTCGCACCACCTGCTGGTCCAGCAATTCCAAATGCTGCAGTTGATCTATTTGGTACCAATGCTTTAGTAGAACCACAAGCTTCCAGTGGAGCCACAGGTCCTGTAATTGGTGGCATGGGAGTGACGGCTGGACCTATTCCTGAGGATTTCTTCCAGAATACTATTCCATCGCAGCAGCTTGCAGCTCGACTACCCCCACCGGGAATAATTCTGTCACGAATTGCTCAACCTGCTCCTGGAATGAGTGCAGTTCGGCCTGTCCATAATCAAAACATGATGGCTAATGTTGGTCTTCCAGATGGTGGGGTCCCACCACAGGCACCGATGCAACAGGCACAGTTTCCTCAGCAACCAGGCATGCCTATGGACCCTATTAGTCTACCTGATGGTGGTGTTCCCCCACAGAGCCAACCTCTTCCCTCGCAACCCCAGGCTCTTCCTCCACAGCCACATGGCTTTCAACCTGCTATTCCTGCCATGTCGCAACCAATTGATCTTAGTGCTCTTGAAGGTCCAGGACAGGGAAAGCAGGCTCCTCGCCCCCCTGCACCTACTGCTGTGCGGCCTGGACAGGTTCCACGTGGTGCTCCTGCAGCAGAGTGCTACAAGATGGGTCTTGCTCATCTTGAGCAAAATCAGCTTACGGATGCTTTATCTTGTTTGGATGAAGCATTCTTGGCCCTTGCAAAGGACCAGTCACGTGAAGCTGATATCAAAGCGCAGGCCACTATTTGTGCACAGTATAAGATAGCTGTTGCTTTGCTACAGGAAATTGCTCGCCTACAAAGGGTTCAAGGAGCTGGTGCGCTCAGTGCAAAGGAGGAAATGGCCAGGCTATCTCGCCACCTTGCTTCCCTACCTATCCAAGCTAAGCACCGGATTAACTGCATCAGAACTGCCATCAAGCGAAACATGGAGGTCCAGAACTTTGCCTATGCCAAGCAAATGCTCGATCTCCTATATTCCAAGGCGCCCCCATCGAAGCAGGATGAGCTCAAGAGTCTGATCGACATGTGTGTCCAGAGGGGGCTGACAAACAAATCTATCGACCCATTCGAAGACCCCTCTCAGTTTTGCGCCGTCACCCTCAGCCGCCTCTCAACCATCGGTCATGATGTTTGCGATCTCTGTGGTGCCAAATTCTCCGCTCTTTCTGCACCAGGGTGTGTCATCTGTGGTATGGGGAGCATCAAGAGATCTGACGCACTTGCTGGACCTGTGCCTTCCCCGTTTGGCTAAACGGCGCTTCCTGTGTCCCAACGTTGTTCTGATTTTTGTATCTATAGTGTGCAGTTAACATTCTTCGCATTTCATTGTTGTAGCTGTCGTAGTATTGT-TGGAGATATAGTA-CGTCTTGGGATTTGGATGAGTTGTAACCACCCTTTTGATCGTGATGTGATTTATACGGACGGTTTTTAGCATTGTAATTAGGTTCGGCATTTATACATTTCCCATTTACGTTACGTTTTGAGTTTAAATGAATATGGTTTATG]

[+] EMBL AK059658             [TTGTTGATGGTGGAAGTAGTGATGAAGATGAGTCTACATCAAAGACTAAAAAGATACACATCAGGATACGTGATAAGCCTGCTGCATCTACTGTTGATGTTAACAAACTGAAAGAAGCCACTAAACAGCTAGGTTTAGGTCCTCCAATCACTAGGACAAGATCGTTATCAGGGACGCCTCAAGAGTTGAACCAGGCTCCTATGCAGCCGCCAGGTCTCGCACCACCTGCTGGTCCAGCAATTCCAAATGCTGCAGTTGATCTATTTGGTACCAATGCTTTAGTAGAACCACAAGCTTCCAGTGGAGCCACAGGTCCTGTAATTGGTGGCATGGGAGTGACGGCTGGACCTATTCCTGAGGATTTCTTCCAGAATACTATTCCATCGCAGCAGCTTGCAGCTCGACTACCCCCACCGGGAATAATTCTGTCACGAATTGCTCAACCTGCTCCTGGAATGAGTGCAGTTCGGCCTGTCCATAATCAAAACATGATGGCTAATGTTGGTCTTCCAGATGGTGGGGTCCCACCACAGGCACCGATGCAACAGGCACAGTTTCCTCAGCAACCAGGCATGCCTATGGACCCTATTAGTCTACCTGATGGTGGTGTTCCCCCACAGAGCCAACCTCTTCCCTCGCAACCCCAGGCTCTTCCTCCACAGCCACATGGCTTTCAACCTGCTATTCCTGCCATGTCGCAACCAATTGATCTTAGTGCTCTTGAAGGTCCAGGACAGGGAAAGCAGGCTCCTCGCCCCCCTGCACCTACTGCTGTGCGGCCTGGACAGGTTCCACGTGGTGCTCCTGCAGCAGAGTGCTACAAGATGGGTCTTGCTCATCTTGAGCAAAATCAGCTTACGGATGCTTTATCTTGTTTGGATGAAGCATTCTTGGCCCTTGCAAAGGACCAGTCACGTGAAGCTGATATCAAAGCGCAGGCCACTATTTGTGCACAGTATAAGATAGCTGTTGCTTTGCTACAGGAAATTGCTCGCCTACAAAGGGTTCAAGGAGCTGGTGCGCTCAGTGCAAAGGAGGAAATGGCCAGGCTATCTCGCCACCTTGCTTCCCTACCTATCCAAGCTAAGCACCGGATTAACTGCATCAGAACTGCCATCAAGCGAAACATGGAGGTCCAGAACTTTGCCTATGCCAAGCAAATGCTCGATCTCCTATATTCCAAGGCGCCCCCATCGAAGCAGGATGAGCTCAAGAGTCTGATCGACATGTGTGTCCAGAGGGGGCTGACAAACAAATCTATCGACCCATTCGAAGACCCCTCTCAGTTCTGCGCCGTCACCCTCAGCCGCCTCTCAACCATCGGTCATGATGTTTGCGATCTCTGTGGTGCCAAGTTCTCCGCTCTTTCTGCACCAGGGTGTGTCATCTGTGGTATGGGGAGCATCAAGAGATCTGACGCACTTGCTGGACCTGTGCCTTCCCCGTTTGGCTAAACGGCGCTTCCTGTGTCCCAACGTTGTTCTGATTTTTGTATCTATAGTGTGCAGTTAACATTCTTCGCATTTCATTGTTGTAGCTGTCGTAGTATTGT TGGAGATATAGTA CGTCTTGGGATTTGGATGAGTTGTAACCACCCTTTTGATCGTGATGTGATTTATACGGACGGTTTTTAGCATTGTAATTAGGTTCGGCATTTATACATTTCC                                         ]
[-] EMBL CB627609             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       TTGCCTATGCCAAGCAAATGCTCGATTTCCTATATTCCAAGGCGCCCCCATCGAAGCAGGATGAGCTCAAGAGTTTGATCGACATGTGTGTCCAGAGGGGGGTGACAAACAAATTTATCGACCCATTGGAAGACCCCTTTCAGTTTTGGGCCGTCACCCTCAGCCGCCTTTCAACCATCGGTCATGATGTTTGCGATTTCTGTGGTGCCAAATTTTCCGCTCTTTTTGCACCAGGGTGTGTCATTTGTGGTATGGGGAGCATCAAGAGATTTGACGCCCTTGCTGGACCTGTGCCTTCCCCGTTTGGGTAAACGGCTTTTCCTGTGTCCCAACGTTGTTTTGATTTTTGTATTTATAGTGTGCAGTTAACATTTTTCGCATTTCATTGTTGTAGCTGTCGTAGTATTGT TGGAGATATAGTA CGTTTTGGGATTTGGATGAGTTGTAACCCCCCTTTTGATCGTGATGTGATTTATACGGACGGTTTTTAGCATTGTAATTAGGTTCGGCATTTATACATTTCCCATTTACGTTACGTTTTGAGTTTAAATGAATATGGTTTATG]
[+] EMBL AU173065             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              GACAAACAAATCTATCGACCCATTCGAAGACCCCTCTCAGTTTTGCGCCGTCACCCTCAGCCGCCTCTCAACCATCGGTCATGATGTTTGCGATCTCTGTGGTGCCAAATTCTCCGCTCTTTCTGCACCAGGGTGTGTCATCTGTGGTATGGGGAGCATCAAGAGATCTGACGCACTTGCTGGACCTGTGCCTTCCCCGTTTGGCTAAACGGCGCTTCCTGTGTCCCAACGTTGTTCTGATTTTTGTATCTATAGTGTGCAGTTAACATTCTTCGCATTTCATTGTTGTAGCTGTCGTAGTATTGT TGGAGATATAGTA CGTCTTGGGATTTGGATGAGTTGTAACCACCCTTTTGATCGTGATGTGATTTATACGGACGGTTTTTAGCATTGTAATTAGGTTCGGCATTTATACATTTCCCATTTACATTAaaaa                          ]
[-] EMBL CB678515             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            TCATGATGTTTGCGATCTATGTGGTGCCAAATTTTCCGTTCTTTCTGCACCAGGGTGTGTCATGTGTGGTATGGGGAGCATCAAGAGATCTGACGCACTTGTTGGACTTGTGCTTTCCCCGTTTGGTTAAAAGGCGCTTCCTGTGTCCCAAGGTTGTTTTGATTTTTGTATTTATAGTGTGCAGTTAACATTGTTCGCATTTCATTGTTGTAGCTGTCGTAGTATTGTGTGGAGATATAGTAGTGTCTTGGGATTTGGAGGAGTTGTAACCACCTTTTTGATCGTGAGGTGATTTATTCGGACGGTTTTTAGCATTGTAATTAGGTTCGGCATTTATA                                                ]




>consensus_9628#0
TTGTTGATGGTGGAAGTAGTGATGAAGATGAGTCTACATCAAAGACTAAAAAGATACACA
TCAGGATACGTGATAAGCCTGCTGCATCTACTGTTGATGTTAACAAACTGAAAGAAGCCA
CTAAACAGCTAGGTTTAGGTCCTCCAATCACTAGGACAAGATCGTTATCAGGGACGCCTC
AAGAGTTGAACCAGGCTCCTATGCAGCCGCCAGGTCTCGCACCACCTGCTGGTCCAGCAA
TTCCAAATGCTGCAGTTGATCTATTTGGTACCAATGCTTTAGTAGAACCACAAGCTTCCA
GTGGAGCCACAGGTCCTGTAATTGGTGGCATGGGAGTGACGGCTGGACCTATTCCTGAGG
ATTTCTTCCAGAATACTATTCCATCGCAGCAGCTTGCAGCTCGACTACCCCCACCGGGAA
TAATTCTGTCACGAATTGCTCAACCTGCTCCTGGAATGAGTGCAGTTCGGCCTGTCCATA
ATCAAAACATGATGGCTAATGTTGGTCTTCCAGATGGTGGGGTCCCACCACAGGCACCGA
TGCAACAGGCACAGTTTCCTCAGCAACCAGGCATGCCTATGGACCCTATTAGTCTACCTG
ATGGTGGTGTTCCCCCACAGAGCCAACCTCTTCCCTCGCAACCCCAGGCTCTTCCTCCAC
AGCCACATGGCTTTCAACCTGCTATTCCTGCCATGTCGCAACCAATTGATCTTAGTGCTC
TTGAAGGTCCAGGACAGGGAAAGCAGGCTCCTCGCCCCCCTGCACCTACTGCTGTGCGGC
CTGGACAGGTTCCACGTGGTGCTCCTGCAGCAGAGTGCTACAAGATGGGTCTTGCTCATC
TTGAGCAAAATCAGCTTACGGATGCTTTATCTTGTTTGGATGAAGCATTCTTGGCCCTTG
CAAAGGACCAGTCACGTGAAGCTGATATCAAAGCGCAGGCCACTATTTGTGCACAGTATA
AGATAGCTGTTGCTTTGCTACAGGAAATTGCTCGCCTACAAAGGGTTCAAGGAGCTGGTG
CGCTCAGTGCAAAGGAGGAAATGGCCAGGCTATCTCGCCACCTTGCTTCCCTACCTATCC
AAGCTAAGCACCGGATTAACTGCATCAGAACTGCCATCAAGCGAAACATGGAGGTCCAGA
ACTTTGCCTATGCCAAGCAAATGCTCGATCTCCTATATTCCAAGGCGCCCCCATCGAAGC
AGGATGAGCTCAAGAGTCTGATCGACATGTGTGTCCAGAGGGGGCTGACAAACAAATCTA
TCGACCCATTCGAAGACCCCTCTCAGTTTTGCGCCGTCACCCTCAGCCGCCTCTCAACCA
TCGGTCATGATGTTTGCGATCTCTGTGGTGCCAAATTCTCCGCTCTTTCTGCACCAGGGT
GTGTCATCTGTGGTATGGGGAGCATCAAGAGATCTGACGCACTTGCTGGACCTGTGCCTT
CCCCGTTTGGCTAAACGGCGCTTCCTGTGTCCCAACGTTGTTCTGATTTTTGTATCTATA
GTGTGCAGTTAACATTCTTCGCATTTCATTGTTGTAGCTGTCGTAGTATTGTTGGAGATA
TAGTACGTCTTGGGATTTGGATGAGTTGTAACCACCCTTTTGATCGTGATGTGATTTATA
CGGACGGTTTTTAGCATTGTAATTAGGTTCGGCATTTATACATTTCCCATTTACGTTACG
TTTTGAGTTTAAATGAATATGGTTTATG

consensusID : consensus_9628#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 691
fasta sequence

                              [TACCCGCACCCGAAACGCACTTACGAATACCCAATTCAGTACCGGAATCAAAACCCGTAACGCCAGCCTTCCCGGACCCCCATGCCGTTCCCCATCGCCGTGCCCGCAACACGGAACCGCATCACCTATCCCAAATTCCCCGGCGCCCCCTCCGAACGCGGATGACGTCCCAAGATCGTGTCGAAAGTGTGTGTCCAGAGGGGGCGGACAAACAAATCTATCAACCCATTCGAAAGCCCCTCTAAGTTATGCCGAGTCACCCTCAACCGCCTCTCAACCATGGGTCATGATGTTTGCGATCTCTGTGGTGCCAAATTCTCCGCTCTTTATGCACCAGGGTGTGTCATCTGTGGTATGGGGAGCATCAAGAGATCTGACGCACTTGCTGGACCTGTGCCTTCCCCGTTTGGCTGAACGGCTCTTCCTGTGTCCCAACGTTGTTCTGATTTTTGTATCTATAGTGTGCAGTTAACATTCTTCGCATTTCATTGTTGTAGCTGTCGTAGTATTGTTGGAGATATAGTACGTCTTGGGATTTGGATGACCCGTACCCACCCAAAATGATCCGTGATGTGATTTATACGGACGGTTTTTAGCATTGTAATTAGGTTCGGCATTTATACATTTCCCATTTACGTTACGTTTTGAGTTTAAATGAATATGGTTTATGAGGTCCAAAAAAAAAAAAAAA]

[-] EMBL CA760213             [TACCCGCACCCGAAACGCACTTACGAATACCCAATTCAGTACCGGAATCAAAACCCGTAACGCCAGCCTTCCCGGACCCCCATGCCGTTCCCCATCGCCGTGCCCGCAACACGGAACCGCATCACCTATCCCAAATTCCCCGGCGCCCCCTCCGAACGCGGATGACGTCCCAAGATCGTGTCGAAAGTGTGTGTCCAGAGGGGGCGGACAAACAAATCTATCAACCCATTCGAAAGCCCCTCTAAGTTATGCCGAGTCACCCTCAACCGCCTCTCAACCATGGGTCATGATGTTTGCGATCTCTGTGGTGCCAAATTCTCCGCTCTTTATGCACCAGGGTGTGTCATCTGTGGTATGGGGAGCATCAAGAGATCTGACGCACTTGCTGGACCTGTGCCTTCCCCGTTTGGCTGAACGGCTCTTCCTGTGTCCCAACGTTGTTCTGATTTTTGTATCTATAGTGTGCAGTTAACATTCTTCGCATTTCATTGTTGTAGCTGTCGTAGTATTGTTGGAGATATAGTACGTCTTGGGATTTGGATGACCCGTACCCACCCAAAATGATCCGTGATGTGATTTATACGGACGGTTTTTAGCATTGTAATTAGGTTCGGCATTTATACATTTCCCATTTACGTTACGTTTTGAGTTTAAATGAATATGGTTTATGAGGTCCAAAAAAAAAAAAAAA]




>consensus_9628#1
TACCCGCACCCGAAACGCACTTACGAATACCCAATTCAGTACCGGAATCAAAACCCGTAA
CGCCAGCCTTCCCGGACCCCCATGCCGTTCCCCATCGCCGTGCCCGCAACACGGAACCGC
ATCACCTATCCCAAATTCCCCGGCGCCCCCTCCGAACGCGGATGACGTCCCAAGATCGTG
TCGAAAGTGTGTGTCCAGAGGGGGCGGACAAACAAATCTATCAACCCATTCGAAAGCCCC
TCTAAGTTATGCCGAGTCACCCTCAACCGCCTCTCAACCATGGGTCATGATGTTTGCGAT
CTCTGTGGTGCCAAATTCTCCGCTCTTTATGCACCAGGGTGTGTCATCTGTGGTATGGGG
AGCATCAAGAGATCTGACGCACTTGCTGGACCTGTGCCTTCCCCGTTTGGCTGAACGGCT
CTTCCTGTGTCCCAACGTTGTTCTGATTTTTGTATCTATAGTGTGCAGTTAACATTCTTC
GCATTTCATTGTTGTAGCTGTCGTAGTATTGTTGGAGATATAGTACGTCTTGGGATTTGG
ATGACCCGTACCCACCCAAAATGATCCGTGATGTGATTTATACGGACGGTTTTTAGCATT
GTAATTAGGTTCGGCATTTATACATTTCCCATTTACGTTACGTTTTGAGTTTAAATGAAT
ATGGTTTATGAGGTCCAAAAAAAAAAAAAAA

consensusID : consensus_9628#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 510
fasta sequence

                              [GGGACGCCTCAAGAGTTGAACCAGGCTCCTATGCAGCCGCCAGGTCTCGCACCACCTGCTGGTCCAGCAATTCCAAATGCTGCAGTTGATCTATTTGGTACCAATGCTTTAGTAGAACCACAAGCTTCCAGTGGAGCCACAGGTCCTGTAATTGGTGGCATGGGAGTGACGGCTGGACCTATTCCTGAGGATTTCTTCCAGAATACTATTCCATCGCAGCAGCTTGCAGCTCGACTACCCCCACCGGGAATAATTCTGTCACGAATTGCTCAACCTGCTCCTGGAATGAGTGCAGTTCGGCCTGTCCATAATCAAAACATGATGGCTAATGTTGGTCTTCCAGATGGTGGGGTCCCACCACAGGCACCGATGCAACAGGCACAGTTTCCTCAGCAACCAGGCATGCCTATGGACCCTATTAGTCTACCTGATGGTGGTGTTCCCCCACAGNNNCAACCTCTTCCCTCACAACCCCNNNCTCNNNNNNNACAGCNNNANNNCTTNNNNNNT]

[+] EMBL CF196956             [GGGACGCCTCAAGAGTTGAACCAGGCTCCTATGCAGCCGCCAGGTCTCGCACCACCTGCTGGTCCAGCAATTCCAAATGCTGCAGTTGATCTATTTGGTACCAATGCTTTAGTAGAACCACAAGCTTCCAGTGGAGCCACAGGTCCTGTAATTGGTGGCATGGGAGTGACGGCTGGACCTATTCCTGAGGATTTCTTCCAGAATACTATTCCATCGCAGCAGCTTGCAGCTCGACTACCCCCACCGGGAATAATTCTGTCACGAATTGCTCAACCTGCTCCTGGAATGAGTGCAGTTCGGCCTGTCCATAATCAAAACATGATGGCTAATGTTGGTCTTCCAGATGGTGGGGTCCCACCACAGGCACCGATGCAACAGGCACAGTTTCCTCAGCAACCAGGCATGCCTATGGACCCTATTAGTCTACCTGATGGTGGTGTTCCCCCACAGNNNCAACCTCTTCCCTCACAACCCCNNNCTCNNNNNNNACAGCNNNANNNCTTNNNNNNT]




>consensus_9628#2
GGGACGCCTCAAGAGTTGAACCAGGCTCCTATGCAGCCGCCAGGTCTCGCACCACCTGCT
GGTCCAGCAATTCCAAATGCTGCAGTTGATCTATTTGGTACCAATGCTTTAGTAGAACCA
CAAGCTTCCAGTGGAGCCACAGGTCCTGTAATTGGTGGCATGGGAGTGACGGCTGGACCT
ATTCCTGAGGATTTCTTCCAGAATACTATTCCATCGCAGCAGCTTGCAGCTCGACTACCC
CCACCGGGAATAATTCTGTCACGAATTGCTCAACCTGCTCCTGGAATGAGTGCAGTTCGG
CCTGTCCATAATCAAAACATGATGGCTAATGTTGGTCTTCCAGATGGTGGGGTCCCACCA
CAGGCACCGATGCAACAGGCACAGTTTCCTCAGCAACCAGGCATGCCTATGGACCCTATT
AGTCTACCTGATGGTGGTGTTCCCCCACAGNNNCAACCTCTTCCCTCACAACCCCNNNCT
CNNNNNNNACAGCNNNANNNCTTNNNNNNT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9628#0      TTGTTGATGGTGGAAGTAGTGATGAAGATGAGTCTACATCAAAGACTAAAAAGATACACA 60
consensus_9628#2      ------------------------------------------------------------
consensus_9628#1      ---------------------------------------TACCCGCACCCGAAACGCACT 21
                                                                                  

consensus_9628#0      TCAGGATACGTGATAAGCCTGCTGCATCTACTGTTGATGTTAACAAACTGAAAGAAGCCA 120
consensus_9628#2      ------------------------------------------------------------
consensus_9628#1      TACGAATACCCAATTCAGTACCGGAATCAAAACCCGTAACGCCAGCCTTCCCGGACCCCC 81
                                                                                  

consensus_9628#0      CTAAACAGCTAGGTTTAGGTCCTCCAATCACTAGGACAAGATCGTTATCAGGGACGCCTC 180
consensus_9628#2      --------------------------------------------------GGGACGCCTC 10
consensus_9628#1      ATGCCGTTCCCCATCGCCGTGCCCGCAACACGGAACCGCATCACCTATCCCAAATTCCCC 141
                                                                           *  ** *

consensus_9628#0      AAGAGTTGAACCAGGCTCCTATGCAGCCGCCAGGTCTCGCACCACCTGCTGGTCCAGCAA 240
consensus_9628#2      AAGAGTTGAACCAGGCTCCTATGCAGCCGCCAGGTCTCGCACCACCTGCTGGTCCAGCAA 70
consensus_9628#1      GGCGCCCCCTCCGAACGCGGATGACGTCCCAAGATCGTGTCGAAAGTGTGTGTCCAGAGG 201
                                **   * *  ***  * * * ** **  *    *  **   ******   

consensus_9628#0      TTCC----AAATGCTGCAGTTGATCTATTTGGTACCAATGCTTTAGTAGAACCACAAGCT 296
consensus_9628#2      TTCC----AAATGCTGCAGTTGATCTATTTGGTACCAATGCTTTAGTAGAACCACAAGCT 126
consensus_9628#1      GGGCGGACAAACAAATCTATCAACCCATTCGAAAGCCCCTCTAAGTTATGCCGAGTCACC 261
                         *    ***     *  *  * * *** *  * *    **    **   * *    * 

consensus_9628#0      TCCAGTGG------AGCCACAGGTCCTGTAATTGGTGGCATGGG-AGTGACGGCTGGACC 349
consensus_9628#2      TCCAGTGG------AGCCACAGGTCCTGTAATTGGTGGCATGGG-AGTGACGGCTGGACC 179
consensus_9628#1      CTCAACCGCCTCTCAACCATGGGTCATGATGTTTGCGATCTCTGTGGTGCCAAATTCTCC 321
                        **   *      * ***  **** **   ** * *   *  *  *** *   *   **

consensus_9628#0      TATTCCTGAGGATTTCTTCCAGAATACTATTCCATCGCAGCAGCTTGCAGCTCGACTACC 409
consensus_9628#2      TATTCCTGAGGATTTCTTCCAGAATACTATTCCATCGCAGCAGCTTGCAGCTCGACTACC 239
consensus_9628#1      GCTCTTTATGCACCAGGGTGTGTCATCTGTGGTATGGGGAGCATCAAGAGATCTGACGCA 381
                        *   *  * *         *    ** *   ** *           ** **     * 

consensus_9628#0      CCCACCGGGAATAATTCTGTCACGAATTGCTCAAC--CTGCTCCTG-GAATGAGTGCAGT 466
consensus_9628#2      CCCACCGGGAATAATTCTGTCACGAATTGCTCAAC--CTGCTCCTG-GAATGAGTGCAGT 296
consensus_9628#1      CTTGCTGGACCTGTGCCTTCCCCGTTTGGCTGAACGGCTCTTCCTGTGTCCCAACGTTGT 441
                      *   * **   *    **  * **  * *** ***  **  ***** *    *  *  **

consensus_9628#0      TC-GGCCTGTCCATAATCAAAACATGATGGCTAATGTTGGTCTTCCA--GATGGTGGGGT 523
consensus_9628#2      TC-GGCCTGTCCATAATCAAAACATGATGGCTAATGTTGGTCTTCCA--GATGGTGGGGT 353
consensus_9628#1      TCTGATTTTTGTATCTATAGTGTGCAGTTAACATTCTTCGCATTTCATTGTTGTAGCTGT 501
                      ** *   * *  **    *        *    * * ** *  ** **  * **  *  **

consensus_9628#0      CCCACCACAGGCACCGATGCAACAGGCACAGTTTCCTCAGCAACCAG-GCATGCCTA--- 579
consensus_9628#2      CCCACCACAGGCACCGATGCAACAGGCACAGTTTCCTCAGCAACCAG-GCATGCCTA--- 409
consensus_9628#1      CGTAGTATTGTTGGAGATATAGTACGTCTTGGGATTTGGATGACCCGTACCCACCCAAAA 561
                      *  *  *  *     ***  *  * *    *     *     *** *  *   ** *   

consensus_9628#0      TGGACCCTATTAGTCTACCTGATGGTGGTGTTCCCCCACAGAGCCAACCTCTTCCCTCGC 639
consensus_9628#2      TGGACCCTATTAGTCTACCTGATGGTGGTGTTCCCCCACAGNNNCAACCTCTTCCCTCAC 469
consensus_9628#1      TGATCCGTGATGTGATTTATACGGACGGTTTTTAGCATTGTAATTAGGTTCGGCATTTAT 621
                      **  ** *  *    *   *   *  *** **   *         *   **  *  *   

consensus_9628#0      A-ACCCCAGGCTCTTCCTCCAC----AGCCACATGGCTTTCAACCTGCTATTCCTGCCAT 694
consensus_9628#2      A-ACCCCNNNCTCNNNNNNNAC----AGCNNNANNNCTTNNNNNNT-------------- 510
consensus_9628#1      ACATTTCCCATTTACGTTACGTTTTGAGTTTAAATGAATATGGTTTATGAGGTCCAAAAA 681
                      * *   *    *              **    *     *      *              

consensus_9628#0      GTCGCAACCAATTGATCTTAGTGCTCTTGAAGGTCCAGGACAGGGAAAGCAGGCTCCTCG 754
consensus_9628#2      ------------------------------------------------------------
consensus_9628#1      AAAAAAAAAA-------------------------------------------------- 691
                                                                                  

consensus_9628#0      CCCCCCTGCACCTACTGCTGTGCGGCCTGGACAGGTTCCACGTGGTGCTCCTGCAGCAGA 814
consensus_9628#2      ------------------------------------------------------------
consensus_9628#1      ------------------------------------------------------------
                                                                                  

consensus_9628#0      GTGCTACAAGATGGGTCTTGCTCATCTTGAGCAAAATCAGCTTACGGATGCTTTATCTTG 874
consensus_9628#2      ------------------------------------------------------------
consensus_9628#1      ------------------------------------------------------------
                                                                                  

consensus_9628#0      TTTGGATGAAGCATTCTTGGCCCTTGCAAAGGACCAGTCACGTGAAGCTGATATCAAAGC 934
consensus_9628#2      ------------------------------------------------------------
consensus_9628#1      ------------------------------------------------------------
                                                                                  

consensus_9628#0      GCAGGCCACTATTTGTGCACAGTATAAGATAGCTGTTGCTTTGCTACAGGAAATTGCTCG 994
consensus_9628#2      ------------------------------------------------------------
consensus_9628#1      ------------------------------------------------------------
                                                                                  

consensus_9628#0      CCTACAAAGGGTTCAAGGAGCTGGTGCGCTCAGTGCAAAGGAGGAAATGGCCAGGCTATC 1054
consensus_9628#2      ------------------------------------------------------------
consensus_9628#1      ------------------------------------------------------------
                                                                                  

consensus_9628#0      TCGCCACCTTGCTTCCCTACCTATCCAAGCTAAGCACCGGATTAACTGCATCAGAACTGC 1114
consensus_9628#2      ------------------------------------------------------------
consensus_9628#1      ------------------------------------------------------------
                                                                                  

consensus_9628#0      CATCAAGCGAAACATGGAGGTCCAGAACTTTGCCTATGCCAAGCAAATGCTCGATCTCCT 1174
consensus_9628#2      ------------------------------------------------------------
consensus_9628#1      ------------------------------------------------------------
                                                                                  

consensus_9628#0      ATATTCCAAGGCGCCCCCATCGAAGCAGGATGAGCTCAAGAGTCTGATCGACATGTGTGT 1234
consensus_9628#2      ------------------------------------------------------------
consensus_9628#1      ------------------------------------------------------------
                                                                                  

consensus_9628#0      CCAGAGGGGGCTGACAAACAAATCTATCGACCCATTCGAAGACCCCTCTCAGTTTTGCGC 1294
consensus_9628#2      ------------------------------------------------------------
consensus_9628#1      ------------------------------------------------------------
                                                                                  

consensus_9628#0      CGTCACCCTCAGCCGCCTCTCAACCATCGGTCATGATGTTTGCGATCTCTGTGGTGCCAA 1354
consensus_9628#2      ------------------------------------------------------------
consensus_9628#1      ------------------------------------------------------------
                                                                                  

consensus_9628#0      ATTCTCCGCTCTTTCTGCACCAGGGTGTGTCATCTGTGGTATGGGGAGCATCAAGAGATC 1414
consensus_9628#2      ------------------------------------------------------------
consensus_9628#1      ------------------------------------------------------------
                                                                                  

consensus_9628#0      TGACGCACTTGCTGGACCTGTGCCTTCCCCGTTTGGCTAAACGGCGCTTCCTGTGTCCCA 1474
consensus_9628#2      ------------------------------------------------------------
consensus_9628#1      ------------------------------------------------------------
                                                                                  

consensus_9628#0      ACGTTGTTCTGATTTTTGTATCTATAGTGTGCAGTTAACATTCTTCGCATTTCATTGTTG 1534
consensus_9628#2      ------------------------------------------------------------
consensus_9628#1      ------------------------------------------------------------
                                                                                  

consensus_9628#0      TAGCTGTCGTAGTATTGTTGGAGATATAGTACGTCTTGGGATTTGGATGAGTTGTAACCA 1594
consensus_9628#2      ------------------------------------------------------------
consensus_9628#1      ------------------------------------------------------------
                                                                                  

consensus_9628#0      CCCTTTTGATCGTGATGTGATTTATACGGACGGTTTTTAGCATTGTAATTAGGTTCGGCA 1654
consensus_9628#2      ------------------------------------------------------------
consensus_9628#1      ------------------------------------------------------------
                                                                                  

consensus_9628#0      TTTATACATTTCCCATTTACGTTACGTTTTGAGTTTAAATGAATATGGTTTATG 1708
consensus_9628#2      ------------------------------------------------------
consensus_9628#1      ------------------------------------------------------