cluster # 9704

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Oryza sativa
cluster # 9704 cluster # 9704 Sequences # 6 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9704#0 length = 675 sequences # 6
consensusID : consensus_9704#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 675
fasta sequence
                              [GAGTAGATCGCTCGCTTCGTGGCTCGAATCGAATCGGTGACGGCGAGAGGAGGGAGGAGGAGGAGGCGACGGGAGGAGGAAGAAGAAGAAGATGAAGGTTCGCGCGTCGGTGAAGCGGCTGTGCGCGTACTGCAAGGTGGTGAAGCGCAGGGGCATCGTGTTCATCCAGTGCAAGGCCAACGCCAAGCACAAGCAGCGCCAGGGCTTCTCCACGCTCGCCGAGGCCGCCGCCGCCTGCCACCCCCCACCTCCGCCGCTGCTCACCAACACATCCCCGGCTGTCGCCGCCGCCGTTGCGGA-GGCCTCGAAGGTTGCTAAGCAAGAGCCGTCTATGAAGTTTAATTGGCCTCTGGGTTTAGCTGCTCTGCTCAAGAACAGCGATAAATAATGTATCTGCTATTTCTGCATGAATCCTAGCTTCTTGATATTTTGGTACTAAGTGTAAGATTTTAGTTAAAGAACCAACAAAGTTTGTGTATCTGCAGTCATCAGCTGAACTGATCTTGTGATGGAATAACACATACCTACACTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN]

[+] EMBL AK063320             [GAGTAGATCGCTCGCTTCGTGGCTCGAATCGAATCGGTGACGGCGAGAGGAGGGAGGAGGAGGAGGCGACGGGAGGAGGAAGAAGAAGAAGATGAAGGTTCGCGCGTCGGTGAAGCGGCTGTGCGCGTACTGCAAGGTGGTGAAGCGCAGGGGCATCGTGTTCATCCAGTGCAAGGCCAACGCCAAGCACAAGCAGCGCCAGGGCTTCTCCACGCTCGCCGAGGCCGCCGCCGCCTGCCACCCCCCACCTCCGCCGCTGCTCACCAACACATCCCCGGCTGTCGCCGCCGCCGTTGCGGA GGCCTCGAAGGTTGCTAAGCAAGAGCCGTCTATGAAGTTTAATTGGCCTCTGGGTTTAGCTGCTCTGCTCAAGAACAGCGATAAATAATGTATCTGCTATTTCTGCATGAATCCTAGCTTCTTGATATTTTGGTACTATGTGTAAGATTTTAGTTAAAGAACCAACAAAGTTTGTGTATCTGCAGTCATCAGCTGAACTGATCTTGTGATGGAATAACACATACCTA                                                                                                                                                    ]
[-] EMBL BI305556             [                                                        GAGGAGGAGGCGACGGGAGGAGGAAGAAGAAGAAGATGAAGGTTCGCGCGTCGGTGAAGCGGCTGTGCGCGTACTGCAAGGTGGTGAAGCGCAGGGGCATCGTGTTCATCCAGTGCAAGGCCAACGCCAAGCACAAGCAGCGCCAGGGCTTCTCCACGCTCGCCGAGGCCGCCGCCGCCTGCCACCCCCCACCTCCGCCGCTGCTCACCAACACATCCCCGGCTGTCGCCGCCGCCGTTGCGGA GGCCTCGAAGGTTGCTAAGCAAGAGCCGTCTATGAAGTTTAATTGGCCTCTGGGTTTAGCTGCTCTGCTCAAGAACAGCGATAAATAATGTATCTGCTATTTCTGCATGAATCCTAGCTTCTTGATATTTTGGTACTAAGTGTAAGATTTTAGTTAAAGAACCAACAAAGTTTGTGTATCTGCAGTCATCAGCTGAACTGATCTTGTGATGGAATAACACATACC                                                                                                                                                      ]
[+] EMBL CA755593             [                                                                         AGGAGGAAGAAGAAGAAGATGAAGGTTCGCGCGTCGGTGAAGCGGCTGTGCGCGTACTGCAAGGTGGTGAAGCGCAGGGGCATCGTGTTCATCCAGTGCAAGGCCAACGCCAAGCACAAGCAGCGCCAGGGCTTCTCCACGCTCGCCGAGGCCGCCGCCGCCTGCCACCCCCCACCTCCGCCGCTGCTCACCAACACATCCCCGGCTGTCGCCGCCGCCGTTGCGGA GGCCTCGAAGGTTGCTAAGCAAGAGCCGTCTATGAAGTTTAATTGGCCTCTGGGTTTAGCTGCTCTGCTCAAGAACAGCGATNAATAATGTATCTGCTATTTCTGCATGAATCCTAGCTTCTTGATATTTTGGTACTATGTGTAAGATTTTAGTTAAAGAACCAACAAAGTTTGTGTATCTGCAGTCATCAGCTGAACTGATCTTGTGATGGAATAACACATACCTACACTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN]
[-] EMBL CB966796             [                                                                           GAGGAAGAAGAAGAAGATGAAGGTTCGCGCGTCGGTGAAGCGGCTGTGCGCGTACTGCAAGGTGGTGAAGCGCAGGGGCATCGTGTTCATCCAGTGCAAGGCCAACGCCAAGCACAAGCAGCGCCAGGGCTTCTCCACGCTCGCCGAGGCCGCCGCCGCCTGCCACCCCCCACCTCCGCCGCTGCTCACCAACACATCCCCGGCTGTCGCCGCCGCCGTTGCGGA GGCCTCGAAGGTTGCTAAGCAAGAGCCGTCTATGAAGTTTAATTGGCCTCTGGGTTTAGCTGCTCTGCTCAAGAACAGCGATAAATAATGTATCTGCTATTTCTGCATGAATCCTAGCTTCTTGATATTTTGGTACTAAGTGTAAGATTTTAGTTAAAG ACCAAC AAGTTTGTGTATCTGC GTCATC GC G ACTGATCTTG GATGGAAT ACACAac                                                                                                                                                        ]
[-] EMBL CB965996             [                                                                                                                                                                                                                                                                                      CTGTCGCCTCCGCGGTTGCGGAGGGCGTCGAAGTTTGCTAAGCAAGAGCCGTCTATGAAGTTTAATTGGCCTCTGGGTTTAGCTGCTCTGCTCAAGAACAGCGATAAATAATGTATCTGCTATTTCTGCATGAATCCTAGCTTCTTGATATTTTGGTACTAAGTGTAAGATTTTAGTTAAAGAACCAACAAAGTTTGTGTATCTGCAGTCATCAGCTGAACTGATCTTGTGATGGAATAACACATACC                                                                                                                                                      ]
[-] EMBL CB966458             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                  TTAGTTAAAGAACCAACAAAGTTTGTGTATCTGCAGTCATCAGCTGAACTGATCTTGTGATGGAATAACACATAC                                                                                                                                                       ]




>consensus_9704#0
GAGTAGATCGCTCGCTTCGTGGCTCGAATCGAATCGGTGACGGCGAGAGGAGGGAGGAGG
AGGAGGCGACGGGAGGAGGAAGAAGAAGAAGATGAAGGTTCGCGCGTCGGTGAAGCGGCT
GTGCGCGTACTGCAAGGTGGTGAAGCGCAGGGGCATCGTGTTCATCCAGTGCAAGGCCAA
CGCCAAGCACAAGCAGCGCCAGGGCTTCTCCACGCTCGCCGAGGCCGCCGCCGCCTGCCA
CCCCCCACCTCCGCCGCTGCTCACCAACACATCCCCGGCTGTCGCCGCCGCCGTTGCGGA
GGCCTCGAAGGTTGCTAAGCAAGAGCCGTCTATGAAGTTTAATTGGCCTCTGGGTTTAGC
TGCTCTGCTCAAGAACAGCGATAAATAATGTATCTGCTATTTCTGCATGAATCCTAGCTT
CTTGATATTTTGGTACTAAGTGTAAGATTTTAGTTAAAGAACCAACAAAGTTTGTGTATC
TGCAGTCATCAGCTGAACTGATCTTGTGATGGAATAACACATACCTACACTTTTNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNN
clustalw multiple alignements is not computed in this case