cluster # 9732

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Oryza sativa
cluster # 9732 cluster # 9732 Sequences # 6 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9732#0 length = 1452 sequences # 3
consensus_9732#1 length = 963 sequences # 1

consensus_9732#2 length = 785 sequences # 1
consensus_9732#3 length = 680 sequences # 1

consensusID : consensus_9732#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1452
fasta sequence

                              [AGCTGCGCAGGTCGACGACCCGGGCTCCGCCGCCGCCGCCTCGCCTCGCCGCCGGCGCGCTCGCTCGCTCGGCTGGTCCGCGTAGTGGGCTGCCTTCCATAGTCGGCTCTGGAGGAGTTTTGAGGGAGGGAGGCGCAGGCATGGGCGAGGAAGAAGAAGACCCCGACTGGCTCCGCGCGTTCCAGCCACCAACTACATCGACGGTGATGCTTTCTTCGGGCTCCGATGATTCTCCTGAAAACAGTCCTACACGGACTACACCATCTGGAGAAGAACAAAAGGGGGAAAACAAGGCTAGTTCAGACCATGCAGGGGATGGAGATGCTGCTGCACTAAATAAGGGCAAAAAGGCAACACCTACTAGGAGGAAAACCCCTACTAGTCAAGAAGATGCTTTCGACAAAGATGAGAAACCAACCATGGAATCAAATCAAGATAAGCCTCCAAAACGCTCGACTCCAAAGAAGAAGTTGGTTAAACCCCCATCTGGTTCTAATGCTTCAAAGGTTACTGGACCAAAAGCTGGTCCAGATCAAATAGATGATACCTTGGAACATCAAGAAGAGGGAGTTGCTGAAGAAGAAATGCAGGATAAACTTACAGAGCACTCTGTCTCCCAGAGGTTGCCATTAATCATTCCTGATAAAATTCAGCGTTCAAAGGCATTGATTGAATGCGATGGTGACTCGATAGACTTAAGTGGAGACGTTGGAGCTGTTGGGAGGATAATAATTTCAAACAGTCCTAACGGAAATCAGGAATTGTTATTGGACCTAAAAGGAACAATATACAAATCAACAATTGTTCCATCCAGGACATTTTGCGTTGTCAGTGTAGGACAAACAGAAGCGAAGATAGAGTCTATCATGGATGACTTTATTCAATTGGAACCCCAATCCAATTTATTTGAAGCAGAGACTATGATGGAAGGTACCCTTGATGGATTCACATTTGATTCTGACGAGGAGGGTGACAAGCTTCCTGAACCGCATGCTTCTCAAAACGATCAAAATAATGAAGATGGGGATCAACCTAAGGCAAAAACCAAAAGAAAAGCTGAGAAACCGG-CAGGGAAGGGACAGAAGAAGGCGAAGGTTGCAGGAAAGGCCACTAAGAAGGGTACAAGGAAAACCCAAACTACGAAGAGAACAAAGAAGGCGAAGAAATAGACCTGTTGCGAAACCGGGAC-GCTACCAGTAAAGACTAGAGAATCCAACTCCAAATGGATCAGACTTGAGAAATTCCAAATGTTGTATGATCTGGGTTATCAGTGTAGCATAATGTACTTCTTTTAGGCGTAGAATGAAATTAGAAGGGATACACATGATTG-CAAAATCCATTTTTATGTCTATGAACTCTCTGTCTATCCTCATTTGTATGTTGTATAACTATCAAATAGCCAAATTTG--AAAAAGTCTGGATATCAAACATTGCCATTCATCTTTAATAAAAA]

[+] EMBL AK059340             [AGCTGCGCAGGTCGACGACCCGGGCTCCGCCGCCGCCGCCTCGCCTCGCCGCCGGCGCGCTCGCTCGCTCGGCTGGTCCGCGTAGTGGGCTGCCTTCCATAGTCGGCTCTGGAGGAGTTTTGAGGGAGGGAGGCGCAGGCATGGGCGAGGAAGAAGAAGACCCCGACTGGCTCCGCGCGTTCCAGCCACCAACTACATCGACGGTGATGCTTTCTTCGGGCTCCGATGATTCTCCTGAAAACAGTCCTACACGGACTACACCATCTGGAGAAGAACAAAAGGGGGAAAACAAGGCTAGTTCAGACCATGCAGGGGATGGAGATGCTGCTGCACTAAATAAGGGCAAAAAGGCAACACCTACTAGGAGGAAAACCCCTACTAGTCAAGAAGATGCTTTCGACAAAGATGAGAAACCAACCATGGAATCAAATCAAGATAAGCCTCCAAAACGCTCGACTCCAAAGAAGAAGTTGGTTAAACCCCCATCTGGTTCTAATGCTTCAAAGGTTACTGGACCAAAAGCTGGTCCAGATCAAATAGATGATACCTTGGAACATCAAGAAGAGGGAGTTGCTGAAGAAGAAATGCAGGATAAACTTACAGAGCACTCTGTCTCCCAGAGGTTGCCATTAATCATTCCTGATAAAATTCAGCGTTCAAAGGCATTGATTGAATGCGATGGTGACTCGATAGACTTAAGTGGAGACGTTGGAGCTGTTGGGAGGATAATAATTTCAAACAGTCCTAACGGAAATCAGGAATTGTTATTGGACCTAAAAGGAACAATATACAAATCAACAATTGTTCCATCCAGGACATTTTGCGTTGTCAGTGTAGGACAAACAGAAGCGAAGATAGAGTCTATCATGGATGACTTTATTCAATTGGAACCCCAATCCAATTTATTTGAAGCAGAGACTATGATGGAAGGTACCCTTGATGGATTCACATTTGATTCTGACGAGGAGGGTGACAAGCTTCCTGAACCGCATGCTTCTCAAAACGATCAAAATAATGAAGATGGGGATCAACCTAAGGCAAAAACCAAAAGAAAAGCTGAGAAACCGG CAGGGAAGGGACAGAAGAAGGCGAAGGTTGCAGGAAAGGCCACTAAGAAGGGTACAAGGAAAACCCAAACTACGAAGAGAACAAAGAAGGCGAAGAAATAGACCTGTTGCGAAACCGGGAC GCTACCAGTAAAGACTAGAGAATCCAACTCCAAATGGATCAGACTTGAGAAATTCCAAATGTTGTATGATCTGGGTTATCAGTGTAGCATAATGTACTTCTTTTAGGCGTAGAATGAAATTAGAAGGGATACACATGATTG CAAAATCCATTTTTATGTCTATGAACTCTCTGTCTATCCTCATTTGTATGTTGTATAACTATCAAATAGCCAAATTTG  AAAAAGTCTGGATATCAAACA                       ]
[+] EMBL CA752977             [                                                                                                                                                                                 CGTTCCAGCCACCAACTACATCGACGGTGATGCTTTCTTCTGACTCCTATGATTCTCCTGAAAACAGTCCTACAAGGACTACACCATCTGGAGAAGAACAAAAGGGGGAAAACAAGGCTAGTTCAGACCATGTATGGGATGGAGATGTTGCTTCACCAAATAAGGGCAAAAAAGCAACACCTACTAGGAGGAAAACCCCTACTAGTCAAGAAGATGCTTTTGGCTAAGATGAGAAACCAACCATGGAATCAAATCAAGATAAGCCTGCAAAACGCTCGACTCCA   AAGAAGTTAGTTAAATTCCCATCTAGTTCTAATGCTTCAAAGGTTACTGGACCAAAAGCTGGTCCAGATCAAATAGATGATACCTTGGAACATCGAGAAGAGGGAGTTGCTGAGGTAGACATGCAGGATANACTTACAGAGCACTCTGTCTCCCAGAGGTNGCCATNAATAATGCCTGATANAGTNCAGCGTTCAnacg                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL BI802235             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ATTCAATTGGAACCCCAATCCAATTTATTTGAAGCAGAGACTATGGTGGAAGGTACCCTTGATGGATTCACATTTGATTCTGACGAGGAGGGTGACAAGCTTCCTGAGCCGCATGCTTCTC AAACGATC AAATAATGAAGATGGAGATCAACCTAAGGCCAAAACC AAAGAAAAGCTGAGAAACCGGCCGGGGAAGGGACAGAAGAAGGCGAAGGTTGCAGGAAAGGCCACTAAGAAGGTTACAAGGAAAACCC AACTACGAAGAGAAC AAGAAGGCGAAGAAATAGAC   TCGCGAAACTGGGACAGCTGCCAGTAAAGACTAGAGAATCCAACTCC AACGGATCAGACTTGAGAAATTCCATATGTTGTATGATCTGGGTTGTCAGTGTAGCATCATGTGCTTCTTTTTGGCGTAGAATGAAAGTAGAAGGGATACACATGATTGCCAAAATCCATTTTTATGTCTATGAACTCTCTGGCTATCCTCATTTGTATGTTGTATAACTATCAGATAGCCATATTTGAAAAAAAATCTGGATATCAACGCTTGCCATTCATCTTTAATAAAAA]




>consensus_9732#0
AGCTGCGCAGGTCGACGACCCGGGCTCCGCCGCCGCCGCCTCGCCTCGCCGCCGGCGCGC
TCGCTCGCTCGGCTGGTCCGCGTAGTGGGCTGCCTTCCATAGTCGGCTCTGGAGGAGTTT
TGAGGGAGGGAGGCGCAGGCATGGGCGAGGAAGAAGAAGACCCCGACTGGCTCCGCGCGT
TCCAGCCACCAACTACATCGACGGTGATGCTTTCTTCGGGCTCCGATGATTCTCCTGAAA
ACAGTCCTACACGGACTACACCATCTGGAGAAGAACAAAAGGGGGAAAACAAGGCTAGTT
CAGACCATGCAGGGGATGGAGATGCTGCTGCACTAAATAAGGGCAAAAAGGCAACACCTA
CTAGGAGGAAAACCCCTACTAGTCAAGAAGATGCTTTCGACAAAGATGAGAAACCAACCA
TGGAATCAAATCAAGATAAGCCTCCAAAACGCTCGACTCCAAAGAAGAAGTTGGTTAAAC
CCCCATCTGGTTCTAATGCTTCAAAGGTTACTGGACCAAAAGCTGGTCCAGATCAAATAG
ATGATACCTTGGAACATCAAGAAGAGGGAGTTGCTGAAGAAGAAATGCAGGATAAACTTA
CAGAGCACTCTGTCTCCCAGAGGTTGCCATTAATCATTCCTGATAAAATTCAGCGTTCAA
AGGCATTGATTGAATGCGATGGTGACTCGATAGACTTAAGTGGAGACGTTGGAGCTGTTG
GGAGGATAATAATTTCAAACAGTCCTAACGGAAATCAGGAATTGTTATTGGACCTAAAAG
GAACAATATACAAATCAACAATTGTTCCATCCAGGACATTTTGCGTTGTCAGTGTAGGAC
AAACAGAAGCGAAGATAGAGTCTATCATGGATGACTTTATTCAATTGGAACCCCAATCCA
ATTTATTTGAAGCAGAGACTATGATGGAAGGTACCCTTGATGGATTCACATTTGATTCTG
ACGAGGAGGGTGACAAGCTTCCTGAACCGCATGCTTCTCAAAACGATCAAAATAATGAAG
ATGGGGATCAACCTAAGGCAAAAACCAAAAGAAAAGCTGAGAAACCGGCAGGGAAGGGAC
AGAAGAAGGCGAAGGTTGCAGGAAAGGCCACTAAGAAGGGTACAAGGAAAACCCAAACTA
CGAAGAGAACAAAGAAGGCGAAGAAATAGACCTGTTGCGAAACCGGGACGCTACCAGTAA
AGACTAGAGAATCCAACTCCAAATGGATCAGACTTGAGAAATTCCAAATGTTGTATGATC
TGGGTTATCAGTGTAGCATAATGTACTTCTTTTAGGCGTAGAATGAAATTAGAAGGGATA
CACATGATTGCAAAATCCATTTTTATGTCTATGAACTCTCTGTCTATCCTCATTTGTATG
TTGTATAACTATCAAATAGCCAAATTTGAAAAAGTCTGGATATCAAACATTGCCATTCAT
CTTTAATAAAAA

consensusID : consensus_9732#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 963
fasta sequence

                              [TCCGCCGCCGCCGCCTCGCCTCGCCGCCGGCGCGCTCGCTCGCTCGGCTGGTCCGCGTAGTGGGCTGCCTTCCATAGTCGGCTCTGGAGGAGTTTTGAGGGAGGGAGGCGCAGGCATGGGCGAGGAAGAAGAAGACCCCGACTGGCTCCGCGCGTTCCAGCCACCAACTACATCGACGGTGATGCTTTCTTCGGGCTCCGATGATTCTCCTGACTCGATAGACTTAAGTGGAGACGTTGGAGCTGTTGGGAGGATAATAATTTCAAACAGTCCTAACGGAAATCAGGAATTGTTATTGGACCTAAAAGGAACAATATACAAATCAACAATTGTTCCATCCAGGACATTTTGCGTTGTCAGTGTAGGACAAACAGAAGCGAAGATAGAGTCTATCATGGATGACTTTATTCAATTGGAACCCCAATCCAATTTATTTGAAGCAGAGACTATGATGGAAGGTACCCTTGATGGATTCACATTTGATTCTGACGAGGAGGGTGACAAGCTTCCTGAACCGCATGCTTCTCAAAACGATCAAAATAATGAAGATGGGGATCAACCTAAGGCAAAAACCAAAAGAAAAGCTGAGAAACCGGCAGGGAAGGGACAGAAGAAGGCGAAGGTTGCAGGAAAGGCCACTAAGAAGGGTACAAGGAAAACCCAAACTACGAAGAGAACAAAGAAGGCGAAGAAATAGACCTGTTGCGAAACCGGGACGCTACCAGTAAAGACTAGAGAATCCAACTCCAAATGGATCAGACTTGAGAAATTCCAAATGTTGTATGATCTGGGTTATCAGTGTAGCATAATGTACTTCTTTTAGGCGTAGAATGAAATTAGAAGGGATACACATGATTGCAAAATCCATTTTTATGTCTATGAACTCTCTGTCTATCCTCATTTGTATGTTGTATAACTATCAAATAGCCAAATTTGAAAAAGTCTGGATATCAAACACTTGCC]

[+] EMBL AK068065             [TCCGCCGCCGCCGCCTCGCCTCGCCGCCGGCGCGCTCGCTCGCTCGGCTGGTCCGCGTAGTGGGCTGCCTTCCATAGTCGGCTCTGGAGGAGTTTTGAGGGAGGGAGGCGCAGGCATGGGCGAGGAAGAAGAAGACCCCGACTGGCTCCGCGCGTTCCAGCCACCAACTACATCGACGGTGATGCTTTCTTCGGGCTCCGATGATTCTCCTGACTCGATAGACTTAAGTGGAGACGTTGGAGCTGTTGGGAGGATAATAATTTCAAACAGTCCTAACGGAAATCAGGAATTGTTATTGGACCTAAAAGGAACAATATACAAATCAACAATTGTTCCATCCAGGACATTTTGCGTTGTCAGTGTAGGACAAACAGAAGCGAAGATAGAGTCTATCATGGATGACTTTATTCAATTGGAACCCCAATCCAATTTATTTGAAGCAGAGACTATGATGGAAGGTACCCTTGATGGATTCACATTTGATTCTGACGAGGAGGGTGACAAGCTTCCTGAACCGCATGCTTCTCAAAACGATCAAAATAATGAAGATGGGGATCAACCTAAGGCAAAAACCAAAAGAAAAGCTGAGAAACCGGCAGGGAAGGGACAGAAGAAGGCGAAGGTTGCAGGAAAGGCCACTAAGAAGGGTACAAGGAAAACCCAAACTACGAAGAGAACAAAGAAGGCGAAGAAATAGACCTGTTGCGAAACCGGGACGCTACCAGTAAAGACTAGAGAATCCAACTCCAAATGGATCAGACTTGAGAAATTCCAAATGTTGTATGATCTGGGTTATCAGTGTAGCATAATGTACTTCTTTTAGGCGTAGAATGAAATTAGAAGGGATACACATGATTGCAAAATCCATTTTTATGTCTATGAACTCTCTGTCTATCCTCATTTGTATGTTGTATAACTATCAAATAGCCAAATTTGAAAAAGTCTGGATATCAAACACTTGCC]




>consensus_9732#1
TCCGCCGCCGCCGCCTCGCCTCGCCGCCGGCGCGCTCGCTCGCTCGGCTGGTCCGCGTAG
TGGGCTGCCTTCCATAGTCGGCTCTGGAGGAGTTTTGAGGGAGGGAGGCGCAGGCATGGG
CGAGGAAGAAGAAGACCCCGACTGGCTCCGCGCGTTCCAGCCACCAACTACATCGACGGT
GATGCTTTCTTCGGGCTCCGATGATTCTCCTGACTCGATAGACTTAAGTGGAGACGTTGG
AGCTGTTGGGAGGATAATAATTTCAAACAGTCCTAACGGAAATCAGGAATTGTTATTGGA
CCTAAAAGGAACAATATACAAATCAACAATTGTTCCATCCAGGACATTTTGCGTTGTCAG
TGTAGGACAAACAGAAGCGAAGATAGAGTCTATCATGGATGACTTTATTCAATTGGAACC
CCAATCCAATTTATTTGAAGCAGAGACTATGATGGAAGGTACCCTTGATGGATTCACATT
TGATTCTGACGAGGAGGGTGACAAGCTTCCTGAACCGCATGCTTCTCAAAACGATCAAAA
TAATGAAGATGGGGATCAACCTAAGGCAAAAACCAAAAGAAAAGCTGAGAAACCGGCAGG
GAAGGGACAGAAGAAGGCGAAGGTTGCAGGAAAGGCCACTAAGAAGGGTACAAGGAAAAC
CCAAACTACGAAGAGAACAAAGAAGGCGAAGAAATAGACCTGTTGCGAAACCGGGACGCT
ACCAGTAAAGACTAGAGAATCCAACTCCAAATGGATCAGACTTGAGAAATTCCAAATGTT
GTATGATCTGGGTTATCAGTGTAGCATAATGTACTTCTTTTAGGCGTAGAATGAAATTAG
AAGGGATACACATGATTGCAAAATCCATTTTTATGTCTATGAACTCTCTGTCTATCCTCA
TTTGTATGTTGTATAACTATCAAATAGCCAAATTTGAAAAAGTCTGGATATCAAACACTT
GCC

consensusID : consensus_9732#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 785
fasta sequence

                              [GAAGCGAAGATAGAGTCTATCATGGATGACTTTATTCAATTGGAACCCCAATCCAATTTATTTGAAGCAGAGACTATGATGGAAGGTACCCTTGATGGATTCACATTTGATTCTGACGAGGAGGGTGACAAGCTTCCTGAACCGCATGCTTCTCAAAACGATCAAAATAATGAAGATGGGGATCAACCTAAGGCAAAAACCAAAAGAGAAGCTGAGAAACCGGCACACTGTTGCAGGAACTAAGTTAATAAGGAACGTACCCAAAATCACATCTGGAGCACCTTGAGCTTCTGCAGCAGCAACATGATTGACACGGGCCTTTGATGCTGGTGCGATAGAGTTGCTCTGGGCAGGGACAATCTTCACGCGTCGGGGCTTCGGACACTTGTCAGCGTAATGTCCTGGGTCTCCACAGTTGAAGCACACCCCGGGCTTGATGCCTTGCTCCTTCTTGGCAGGTTGTTGCTGTGTCGAAGCTGCAACAGGGTGTGGAGCTTGATTGCGGATGTTGTTGCCCGCGTTGTTGTTGAAGAACTGACGCTGCGGGCGAACAACAGACGAAGAACCTCCCTGTGGCATGGACCTGGGGTCCTAAAGTAAGACGCGGCCTCTGACTATTCCCCCTGNTGTGCCCTTGAAGTGAGCATTCCGGCGTTTCTTCTGCTCCATGCGATTTGTCACGCCCCTGAAGTTCCCCTCCCTTGCTCTAAATTCATAAAATAAAATCGTTCGAAGAAATTGGTTAATTTAACCTANAGATGAATCCCTAATTAATAAATGCAAAT]

[+] EMBL CA765662             [GAAGCGAAGATAGAGTCTATCATGGATGACTTTATTCAATTGGAACCCCAATCCAATTTATTTGAAGCAGAGACTATGATGGAAGGTACCCTTGATGGATTCACATTTGATTCTGACGAGGAGGGTGACAAGCTTCCTGAACCGCATGCTTCTCAAAACGATCAAAATAATGAAGATGGGGATCAACCTAAGGCAAAAACCAAAAGAGAAGCTGAGAAACCGGCACACTGTTGCAGGAACTAAGTTAATAAGGAACGTACCCAAAATCACATCTGGAGCACCTTGAGCTTCTGCAGCAGCAACATGATTGACACGGGCCTTTGATGCTGGTGCGATAGAGTTGCTCTGGGCAGGGACAATCTTCACGCGTCGGGGCTTCGGACACTTGTCAGCGTAATGTCCTGGGTCTCCACAGTTGAAGCACACCCCGGGCTTGATGCCTTGCTCCTTCTTGGCAGGTTGTTGCTGTGTCGAAGCTGCAACAGGGTGTGGAGCTTGATTGCGGATGTTGTTGCCCGCGTTGTTGTTGAAGAACTGACGCTGCGGGCGAACAACAGACGAAGAACCTCCCTGTGGCATGGACCTGGGGTCCTAAAGTAAGACGCGGCCTCTGACTATTCCCCCTGNTGTGCCCTTGAAGTGAGCATTCCGGCGTTTCTTCTGCTCCATGCGATTTGTCACGCCCCTGAAGTTCCCCTCCCTTGCTCTAAATTCATAAAATAAAATCGTTCGAAGAAATTGGTTAATTTAACCTANAGATGAATCCCTAATTAATAAATGCAAAT]




>consensus_9732#2
GAAGCGAAGATAGAGTCTATCATGGATGACTTTATTCAATTGGAACCCCAATCCAATTTA
TTTGAAGCAGAGACTATGATGGAAGGTACCCTTGATGGATTCACATTTGATTCTGACGAG
GAGGGTGACAAGCTTCCTGAACCGCATGCTTCTCAAAACGATCAAAATAATGAAGATGGG
GATCAACCTAAGGCAAAAACCAAAAGAGAAGCTGAGAAACCGGCACACTGTTGCAGGAAC
TAAGTTAATAAGGAACGTACCCAAAATCACATCTGGAGCACCTTGAGCTTCTGCAGCAGC
AACATGATTGACACGGGCCTTTGATGCTGGTGCGATAGAGTTGCTCTGGGCAGGGACAAT
CTTCACGCGTCGGGGCTTCGGACACTTGTCAGCGTAATGTCCTGGGTCTCCACAGTTGAA
GCACACCCCGGGCTTGATGCCTTGCTCCTTCTTGGCAGGTTGTTGCTGTGTCGAAGCTGC
AACAGGGTGTGGAGCTTGATTGCGGATGTTGTTGCCCGCGTTGTTGTTGAAGAACTGACG
CTGCGGGCGAACAACAGACGAAGAACCTCCCTGTGGCATGGACCTGGGGTCCTAAAGTAA
GACGCGGCCTCTGACTATTCCCCCTGNTGTGCCCTTGAAGTGAGCATTCCGGCGTTTCTT
CTGCTCCATGCGATTTGTCACGCCCCTGAAGTTCCCCTCCCTTGCTCTAAATTCATAAAA
TAAAATCGTTCGAAGAAATTGGTTAATTTAACCTANAGATGAATCCCTAATTAATAAATG
CAAAT

consensusID : consensus_9732#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 680
fasta sequence

                              [TTTTTTTTCTCAAGATGCTTTGTTTCTGATGTCAATAGTACCTCTTAAATCTTATCTTACAACTGTTCTACATTATTTGTTATTGATCGTCGGATAATGCGTCTGTTATATTTAATACTGATTCCATTGTACATATTACTTAGTTGCAAACATCATGTCCACTCTGTTGTCAATTTCTATGCCTAATTTTTTTTGTACAGACTCCAAAGAGGTTAGTTAAATTCCCATCTAGTTCTAATGCTTCAAAGGTTACTGGACCAAAAGCTGGTCCAGATCAAATAGATGGTAAGGCTTAAGAAAAGGGTTGCCTTTTAGTGAAAAGTCAGTTTGTGAATTCTTAGTTTCAATGATTGATAATTATAGTCATGGTCATTCATAGATACCTTGGAACATCGAGAAGAGGGAGTTGCTGAGGTAGACATGCAGGATAAACTTACAGAGCACTCTGTAAGATGCCTTAACTTCCTTCTATTTTTAATATATTTTTTCCCCCACACTACGGTTCCAGAACTTTGAGATCATTGACCCAAAAGAGGAGCAAAGAAAACAAAATTAGAGCCCACATCTTAGTATCTTACTGGGAATATCCCAACATGTGTCACTTTTGATACTGCATTATATTGAACTAGTGAAAGTTGGGTAAATCCTTTTAAGAATGTATAGGANAATATGAANATAAA]

[+] EMBL CA760971             [TTTTTTTTCTCAAGATGCTTTGTTTCTGATGTCAATAGTACCTCTTAAATCTTATCTTACAACTGTTCTACATTATTTGTTATTGATCGTCGGATAATGCGTCTGTTATATTTAATACTGATTCCATTGTACATATTACTTAGTTGCAAACATCATGTCCACTCTGTTGTCAATTTCTATGCCTAATTTTTTTTGTACAGACTCCAAAGAGGTTAGTTAAATTCCCATCTAGTTCTAATGCTTCAAAGGTTACTGGACCAAAAGCTGGTCCAGATCAAATAGATGGTAAGGCTTAAGAAAAGGGTTGCCTTTTAGTGAAAAGTCAGTTTGTGAATTCTTAGTTTCAATGATTGATAATTATAGTCATGGTCATTCATAGATACCTTGGAACATCGAGAAGAGGGAGTTGCTGAGGTAGACATGCAGGATAAACTTACAGAGCACTCTGTAAGATGCCTTAACTTCCTTCTATTTTTAATATATTTTTTCCCCCACACTACGGTTCCAGAACTTTGAGATCATTGACCCAAAAGAGGAGCAAAGAAAACAAAATTAGAGCCCACATCTTAGTATCTTACTGGGAATATCCCAACATGTGTCACTTTTGATACTGCATTATATTGAACTAGTGAAAGTTGGGTAAATCCTTTTAAGAATGTATAGGANAATATGAANATAAA]




>consensus_9732#3
TTTTTTTTCTCAAGATGCTTTGTTTCTGATGTCAATAGTACCTCTTAAATCTTATCTTAC
AACTGTTCTACATTATTTGTTATTGATCGTCGGATAATGCGTCTGTTATATTTAATACTG
ATTCCATTGTACATATTACTTAGTTGCAAACATCATGTCCACTCTGTTGTCAATTTCTAT
GCCTAATTTTTTTTGTACAGACTCCAAAGAGGTTAGTTAAATTCCCATCTAGTTCTAATG
CTTCAAAGGTTACTGGACCAAAAGCTGGTCCAGATCAAATAGATGGTAAGGCTTAAGAAA
AGGGTTGCCTTTTAGTGAAAAGTCAGTTTGTGAATTCTTAGTTTCAATGATTGATAATTA
TAGTCATGGTCATTCATAGATACCTTGGAACATCGAGAAGAGGGAGTTGCTGAGGTAGAC
ATGCAGGATAAACTTACAGAGCACTCTGTAAGATGCCTTAACTTCCTTCTATTTTTAATA
TATTTTTTCCCCCACACTACGGTTCCAGAACTTTGAGATCATTGACCCAAAAGAGGAGCA
AAGAAAACAAAATTAGAGCCCACATCTTAGTATCTTACTGGGAATATCCCAACATGTGTC
ACTTTTGATACTGCATTATATTGAACTAGTGAAAGTTGGGTAAATCCTTTTAAGAATGTA
TAGGANAATATGAANATAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9732#0      AGCTGCGCAGGTCGACGACCCGGGCTCCGCCGCCGCCGCCTCGCCTCGCCGCCGGCGCGC 60
consensus_9732#1      ------------------------------------------------------------
consensus_9732#2      ------------------------------------------------------------
consensus_9732#3      ------------------------------------------------------------
                                                                                  

consensus_9732#0      TCGCTCGCTCGGCTGGTCCGCGTAGTGGGCTGCCTTCCATAGTCGGCTCTGGAGGAGTTT 120
consensus_9732#1      ------------------------------------------------------------
consensus_9732#2      ------------------------------------------------------------
consensus_9732#3      ------------------------------------------------------------
                                                                                  

consensus_9732#0      TGAGGGAGGGAGGCGCAGGCATGGGCGAGGAAGAAGAAGACCCCGACTGGCTCCGCGCGT 180
consensus_9732#1      ------------------------------------------------------------
consensus_9732#2      ------------------------------------------------------------
consensus_9732#3      ------------------------------------------------------------
                                                                                  

consensus_9732#0      TCCAGCCACCAACTACATCGACGGTGATGCTTTCTTCGGGCTCCGATGATTCTCCTGAAA 240
consensus_9732#1      ------------------------------------------------------------
consensus_9732#2      ------------------------------------------------------------
consensus_9732#3      ------------------------------------------------------------
                                                                                  

consensus_9732#0      ACAGTCCTACACGGACTACACCATCTGGAGAAGAACAAAAGGGGGAAAACAAGGCTAGTT 300
consensus_9732#1      ------------------------------------------------------------
consensus_9732#2      ------------------------------------------------------------
consensus_9732#3      ------------------------------------------------------------
                                                                                  

consensus_9732#0      CAGACCATGCAGGGGATGGAGATGCTGCTGCACTAAATAAGGGCAAAAAGGCAACACCTA 360
consensus_9732#1      ------------------------------------------------------------
consensus_9732#2      ------------------------------------------------------------
consensus_9732#3      ------------------------------------------------------------
                                                                                  

consensus_9732#0      CTAGGAGGAAAACCCCTACTAGTCAAGAAGATGCTTTCGACAAAGATGAGAAACCAACCA 420
consensus_9732#1      ------------------------------------------------------------
consensus_9732#2      ------------------------------------------------------------
consensus_9732#3      ------------------------------------------------------------
                                                                                  

consensus_9732#0      TGGAATCAAATCAAGATAAGCCTCCAAAACGCTCGACTCCAAAGAAGAAGTTGGTTAAAC 480
consensus_9732#1      -------------------------------------TCC---GCCGCCGCCGCCTCGCC 20
consensus_9732#2      ------------------------------------------------------------
consensus_9732#3      ------------------------------------------------------------
                                                                                  

consensus_9732#0      CCCCATCTGGTTCTAATGCTTCAAAGGTTACTGGACCAAAAGCTGGTCCAGATCAAATAG 540
consensus_9732#1      TCGCCGCCGGCGCGCTCGCTCGCTCGG---CTGGTCCGCGTAGTGGGCTGCCTTCCATAG 77
consensus_9732#2      ------------------------------------------------------------
consensus_9732#3      ------------------------------------------------------------
                                                                                  

consensus_9732#0      ATGATACCTTGGAACATCAAGAAGAGGGAGTTGCTGAAGAAGAAATGCAGGATAAACTTA 600
consensus_9732#1      TCGGCTCTGGAGGAGTTTTGAGGGAGGGAGGCGCAGGCATGGGCGAGGAAGAAGAAGACC 137
consensus_9732#2      ------------------------------------------------------------
consensus_9732#3      ------------------------------------------------------------
                                                                                  

consensus_9732#0      CAGAGCACTCTGTCTCCCAGAGGTT--GCCATTAATCATTCCTGATAAAATTCAGCGTTC 658
consensus_9732#1      CCGA-----CTGGCTCCGCGCGTTCCAGCCACCAACTACATCGACGGTGATGCTTTCTTC 192
consensus_9732#2      ------------------------------------------------------------
consensus_9732#3      ------------------------------------------------------------
                                                                                  

consensus_9732#0      AAAGGCATTGATTGAATGCGATGGTGACTCGATAGACTTAAGTGGAGACGTTGGAGCTGT 718
consensus_9732#1      G--GGCTCCGAT--GATTC--TCCTGACTCGATAGACTTAAGTGGAGACGTTGGAGCTGT 246
consensus_9732#2      ------------------------------------------------------------
consensus_9732#3      -------------------TTTTTTTTCTCAAGATGCTTTGTTTCTGATGTCAATAGTAC 41
                                                                                  

consensus_9732#0      TGGGAGGATAATAATTTCAAACAGTCCTAACGGAAATCAGGAATTGTTATTGGACCTAAA 778
consensus_9732#1      TGGGAGGATAATAATTTCAAACAGTCCTAACGGAAATCAGGAATTGTTATTGGACCTAAA 306
consensus_9732#2      ------------------------------------------------------------
consensus_9732#3      CTCTTAAATCTTATCTTACAACTGTTCTA--------CATTATTTGTTATTGATCGTC-- 91
                                                                                  

consensus_9732#0      AGGAACAATATACAAATCAACAATTGTTCCATCCAGGACATTTTGCGTTGTCAGTGTAGG 838
consensus_9732#1      AGGAACAATATACAAATCAACAATTGTTCCATCCAGGACATTTTGCGTTGTCAGTGTAGG 366
consensus_9732#2      ------------------------------------------------------------
consensus_9732#3      --GGATAATGCGT----------CTGTTATATTTAATACTGATTCCATTGTACATAT--- 136
                                                                                  

consensus_9732#0      ACAAACAGAAGCGAAGATAGAGTCTATCATGGATGACTTTATTCAATTGGAACCCCAATC 898
consensus_9732#1      ACAAACAGAAGCGAAGATAGAGTCTATCATGGATGACTTTATTCAATTGGAACCCCAATC 426
consensus_9732#2      -------GAAGCGAAGATAGAGTCTATCATGGATGACTTTATTCAATTGGAACCCCAATC 53
consensus_9732#3      -TACTTAGTTGCAAACATCATGTCCACTCTG--------TTGTCAATT----TCTATGCC 183
                             *  ** ** **   *** *   **        *  ******     *     *

consensus_9732#0      CAATTTATTTGAAGCAGAGACTATGATGGAAGGTACCCTTGATGGATTCACATTTGATTC 958
consensus_9732#1      CAATTTATTTGAAGCAGAGACTATGATGGAAGGTACCCTTGATGGATTCACATTTGATTC 486
consensus_9732#2      CAATTTATTTGAAGCAGAGACTATGATGGAAGGTACCCTTGATGGATTCACATTTGATTC 113
consensus_9732#3      TAATTTTTTTTGTACAGACTCCA----AAGAGGT----TAGTTAAATTCCCATCTAGTTC 235
                       ***** ***    ****  * *       ****    * * *  **** *** *  ***

consensus_9732#0      TGACGAGGAGGGTGACAAGCTTCCTGAACCGCATGCTTCTCAAAACGATCAAAATAATGA 1018
consensus_9732#1      TGACGAGGAGGGTGACAAGCTTCCTGAACCGCATGCTTCTCAAAACGATCAAAATAATGA 546
consensus_9732#2      TGACGAGGAGGGTGACAAGCTTCCTGAACCGCATGCTTCTCAAAACGATCAAAATAATGA 173
consensus_9732#3      TAATG------CTTCAAAGGTTACTGGACCAAAAGCTGGTCCAGATCAAATAGATGGTAA 289
                      * * *       *   *** ** *** ***  * ***  ** * *  *   * **  * *

consensus_9732#0      AGATGGGGATCAACCTAAGGCAAAAACCAAAAGAAAAGCTGAGAAACCGGCA----GGGA 1074
consensus_9732#1      AGATGGGGATCAACCTAAGGCAAAAACCAAAAGAAAAGCTGAGAAACCGGCA----GGGA 602
consensus_9732#2      AGATGGGGATCAACCTAAGGCAAAAACCAAAAGAGAAGCTGAGAAACCGGCACACTGTTG 233
consensus_9732#3      GGCTTAAGAAAAGGGTTGCCTTTTAGTGAAAAGTCAGTTTGTGAATTCTTAG-------- 341
                       * *   **  *   *        *   *****  *   ** ***  *            

consensus_9732#0      AGGGACAGAAGAAGGCGAAGGTTGCAGGAAAGGCCACTAAGAAGGGTACAAGGAAAACCC 1134
consensus_9732#1      AGGGACAGAAGAAGGCGAAGGTTGCAGGAAAGGCCACTAAGAAGGGTACAAGGAAAACCC 662
consensus_9732#2      CAGGAACTAAGTTAATAAGGAACGTACCCAAAATCAC-ATCTGGAGCACCTTGAGCTTCT 292
consensus_9732#3      -----TTTCAATGATTGATAATTATAGTCATGGTCATTCATAGATAC-CTTGGAACATCG 395
                               *       *       *   *    **            *   **    * 

consensus_9732#0      AAACTACGAAGAGAACAAAGAAGG-----------CGAAGAAATAGACCTGTTGCGAAAC 1183
consensus_9732#1      AAACTACGAAGAGAACAAAGAAGG-----------CGAAGAAATAGACCTGTTGCGAAAC 711
consensus_9732#2      GCAGCAGCAACATGATTGACACGGGCCTTTGATGCTGGTGCGATAGAGTTGCTCTGGG-C 351
consensus_9732#3      AGAAGAGGGAGTTGCTGAGGTAGA----------CATGCAGGATAAACTTACAGAGCACT 445
                        *  *   *            *                   *** *  *     *    

consensus_9732#0      CGGGACGCTACCAGTAAAGACTAGAGAATCCAACTCCAAATGGATCAGACTTGAGAAATT 1243
consensus_9732#1      CGGGACGCTACCAGTAAAGACTAGAGAATCCAACTCCAAATGGATCAGACTTGAGAAATT 771
consensus_9732#2      AGGGACA--ATCTTCACGCGTCGGGGCTTCGGACACTTGTCAGCGTAATGTCCTGGGTCT 409
consensus_9732#3      CTGTAAGATGCCTTAACTTCCTTCTATTTTTAATATATTTTTTCCCCCACACTACGG-TT 504
                        * *      *   *            *   *                          *

consensus_9732#0      CCAAA--TGTTGTATGATCTGGGTTATCAGTGTAGCATAAT----GTACTTCTTTTAGGC 1297
consensus_9732#1      CCAAA--TGTTGTATGATCTGGGTTATCAGTGTAGCATAAT----GTACTTCTTTTAGGC 825
consensus_9732#2      CCACAGTTGAAGCACACCCCGGGCTTGATGCCTTGCTCCTTCTTGGCAGGTTGTTGCTGT 469
consensus_9732#3      CCAGAACTTTGAGATCAT-TGACCCAAAAGAGGAGCAAAGAAAACAAAATTAGAGCCCAC 563
                      *** *  *     *      *        *    **           *  *         

consensus_9732#0      GTAGAATGAAATTAGAAGGGATACA-CATGATTGCAAA-------ATCCATTTTTATGTC 1349
consensus_9732#1      GTAGAATGAAATTAGAAGGGATACA-CATGATTGCAAA-------ATCCATTTTTATGTC 877
consensus_9732#2      GTCGAA-GCTGCAACAGGGTGTGGAGCTTGATTGCGGATGTTGTTGCCCGCGTTGTTGTT 528
consensus_9732#3      ATCTTAGTATCTTACTGGGAATATCCCAACATGT-----------GTCACTTTTGATAC- 611
                       *   *       *   **  *    *   **               *    **  *   

consensus_9732#0      TATGAACT--CTCTGT---CTATCCTCATTTG--TATGTTGTATAACTATCAAATAGCCA 1402
consensus_9732#1      TATGAACT--CTCTGT---CTATCCTCATTTG--TATGTTGTATAACTATCAAATAGCCA 930
consensus_9732#2      GAAGAACTGACGCTGCGGGCGAACAACAGACG--AAGAACCTCCCTGTGGCATGGACCTG 586
consensus_9732#3      --TGCATT-ATATTGAA--CTAGTGAAAGTTGGGTAAATCCTTTTAAGAATGTATAGGAN 666
                         * * *     **    * *     *   *   *     *             *    

consensus_9732#0      AATTTGAAAA---AGTCTGGATATCAAACA-TTGCCATTCATCTTTAATAAAAA------ 1452
consensus_9732#1      AATTTGAAAA---AGTCTGGATATCAAACACTTGCC------------------------ 963
consensus_9732#2      GGGTCCTAAAGTAAGACGCGGCCTCTGACTATTCCCCCTGNTGTGCCCTTGAAGTGAGCA 646
consensus_9732#3      AATATGAANATAAA---------------------------------------------- 680
                             * *   *                                              

consensus_9732#0      ------------------------------------------------------------
consensus_9732#1      ------------------------------------------------------------
consensus_9732#2      TTCCGGCGTTTCTTCTGCTCCATGCGATTTGTCACGCCCCTGAAGTTCCCCTCCCTTGCT 706
consensus_9732#3      ------------------------------------------------------------
                                                                                  

consensus_9732#0      ------------------------------------------------------------
consensus_9732#1      ------------------------------------------------------------
consensus_9732#2      CTAAATTCATAAAATAAAATCGTTCGAAGAAATTGGTTAATTTAACCTANAGATGAATCC 766
consensus_9732#3      ------------------------------------------------------------
                                                                                  

consensus_9732#0      -------------------
consensus_9732#1      -------------------
consensus_9732#2      CTAATTAATAAATGCAAAT 785
consensus_9732#3      -------------------