cluster # 10646

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Schistosoma mansoni
cluster # 10646 cluster # 10646 Sequences # 19 consensus # 5

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10646#0 length = 1030 sequences # 4
consensus_10646#1 length = 939 sequences # 2

consensus_10646#2 length = 760 sequences # 11
consensus_10646#3 length = 315 sequences # 1
consensus_10646#4 length = 124 sequences # 1

consensusID : consensus_10646#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1030
fasta sequence

                              [AACTATATGTAATCATATTAACGCACGTACACCATCATGGACAACAATGCAAACGGAAAACACTGAAATTCAGGATCAAGAGAATTTTAAGAGTTTTTAGAACTATGGCAATCAAACCAATTGGTAGTCAAACATATAGACAGAAATTCGATCCGCTAAACCATATGAAAAAGGTTGGACAACCAAATGGTCAGAGACCAACCGAACAAGGCAGTCAAGAGTAGTAAAAAGACGAATGTAACCTTCTTCTTCGTCCTCTAGTTAAATCAATCTGAAAATATTAGTAAAATACTCAAAACGAAACTGAATCAACCCATGCATTCACTTATTGTGCTTTGAAATACATTATAATATGTCCACAGTATTACCAATATACGCTTTTCTATTTATTTACTAAATACGTTTCCCACTCTTTAAATATATAACATATATATAATAGATACAAAGAAACGAAATACAACGTGAGAAGAAATATACAAATGAAGAAGAGTATTATGAAAAGCTAGTATTTTGATGCGCTCGAGTGCCACAGCATATATGGTATCAGTAAGCAGGGTGTAACAAACAAAGCGAAACCAATCCACTCAATTGTATGAGAAGTGAAACGCTTGTTATACTCCTTCAGTCTGTGAATTGTAAGTAGACCAGGTGCAGAAGAATACAAAAGGAACTNTTCTGCNAATCAGTAGACTTGTAAAGTATTGTAGCACTAGAAAATTATGAACGCCCATTATTTGAGGTTNGAGGGATATGACATGAGTGACGTTCGAGGAGGCAGGTACACAGGCCACGAGCAGAGGACTCCCATGATCATGTAANTCTGNNNTCGAAAGATTCAATAGCTCACATCTTGGCGCGCGGACTATGGAATNTAATGNATAGAATAGCTTCTTTTCTGAGATACTATCAATCTTGAACGCATCGACTGCCNATTGAATCNGACGTATGGCAGACANTACTACGAACTACTGCATTGGGCATCTAGNTATNATANGTTGAGTCACAACGAAANGTANAANNNTCTACTACG]

[+] EMBL CD074483             [AACTATATGTAATCATATTAACGCACGTACACCATCATGGACAACAATGCAAACGGAAAACACTGAAATTCAGGATCAAGAGAATTTTAAGAGTTTTTAGAACTATGGCAATCAAACCAATTGGTAGTCAAACATATAGACAGAAATTCGATCCGCTAAACCATATGAAAAAGGTTGGACAACCAAATGGTCAGAGACCAACCGAACAAGGCAGTCAAGAGTAGTAAAAAGACGAATGTAACCTTCTTCTTCGTCCTCTAGTTAAATCAATCTGAAAATATTAGTAAAATACTCAAAACGAAACTGAATCAACCCATGCATTCACTTATTGTGCTTTGAAATACATTATAATATGTCCACAGTATTACCAATATACGCTTTTCTATTTATTTACTAAATACGTTTCCCACTCTTTAAATATATAACATATATATAATAGATACAAAGAAACGAAATACAACGTGAGAAGAAATATACAAATGAAGAAGAGTATTATGAAAAGCTAGTATTTTGATGCGCTCGAGTGCCACAGCATATATGGTATCAGTAAGCAGGGTGTAACAAACAAAGCGAAACCAATCCACTCAATTGTATGAGAAGTGAAACGCTTGTTATACTCCTTCAGTCTGTGAATTGTAAGTAGACCAGGTGCAGAAGAATACAAAAGGAACTNTTCTGCNAATCAGTAGACTTGTAAAGTATTGTAGCACTAGAAAATTATGAACGCCCATTATTTGAGGTTNGAGGGATATGACATGAGTGACGTTCGAGGAGGCAGGTACACAGGCCACGAGCAGAGGACTCCCATGATCATGTAANTCTGNNNTCGAAAGATTCAATAGCTCACATCTTGGCGCGCGGACTATGGAATNTAATGNATAGAATAGCTTCTTTTCTGAGATACTATCAATCTTGAACGCATCGACTGCCNATTGAATCNGACGTATGGCAGACANTACTACGAACTACTGCATTGGGCATCTAGNTATNATANGTTGAGTCACAACGAAANGTANAANNNTCTACTACG]
[+] EMBL CD074474             [AACTATATGTAATTTTATTAACGCACGTACACCATCATGGACAACAATGCAAACGGAAAACACTGAAATTCAGGATCAAGAGAATTTTAAGAGTTTTTAGAACTATGGCAATCAAACCAATTGGTAGTCAAACATATAGACAGAAATTCGATCCGCTAAACCATATGAAAAAGGTTGGACAACCAAATGGTCAGAGACCAACCGAACAAGGCAGTCAAGAGTAGTAAAAAGACGAATGTAACCTTCTTCTTCGTCCTCTAGTTAAATCAATCTGAAAATATTAGTAAAATACTCAAAACGAAACTGAATCAACCCATGCATTCACTTATTGTGCTTTGAAATACATTATAATATGTCCACAGTATTACCAATATACGCTTTTCTATTTATTTACTAAATACGTTTCCCACTCTTTAAATATATAACATATATATAATAGATACAAAGAAACGAAATACAACGTGAGAAGAAATATACAAATGAAGAAGAGTATTATGAAAAGCTAGTATTTTGATGCGCTCGAGTGCCACAGCATATATGGTATCAGTAAGCAGGGTGTAACAAACAAAGCGAAACCAATCCACTCAATTGTATGAGAAGTGAAACGCTTGTTATACTCCTTCAGTCTGTGAATTGTAAGTAGA                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CD074305             [AACTATATGTAATCATATTAACGCACGTACACCATCATGGACAACAATGCAAACGGAAAACACTGAAATTCAGGATCAAGAGAATTTTAAGAGTTTTTAGAACTATGGCAATCAAACCAATTGGTAGTCAAACATATAGACAGAAATTCGATCCGCTAAACCATATGAAAAAGGTTGGACAACCAAATGGTCAGAGACCAACCGAACAAGGCAGTCAAGAGTAGTAAAAAGACGAATGTAACCTTCTTCTTCGTCCTCTAGTTAAATCAATCTGAAAATATTAGTAAAATACTCAAAACGAAACTGAATCAACCCATGCATTCACTTATTGTGCTTTGAAATACATTATAATATGTCCACAGTATTACCAATATACGCTTTTCTATTTATTTACTAAATACGTTTCCCACTCTTTAAATATATAACATATATATAATAGATACAAAGAAACGAAATACAACGTGAGAAGAAATATACAAATGAAGAAGAGTATTATGAAAAGCTAGTATTTTGATGCGCTCGAGTGCCACAGCATATATGGTATCAGTAAGCAGGGTGTAACAAACAAAGCGAAACCAATCCACTCAATTGTATGAGAAGTGAAACGCTTGTTATACTCCTTCAGTCTGTGAAT                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CD074294             [AACTATATGTAATCATATTAACGCACGTACACCATCATGGACAACAATGCAAACGGAAAACACTGAAATTCAGGATCAAGAGAATTTTAAGAGTTTTTAGAACTATGGCAATCAAACCAATTGGTAGTCAAACATATAGACAGAAATTCGATCCGCTAAACCATATGAAAAAGGTTGGACAACCAAATGGTCAGAGACCAACCGAACAAGGCAGTCAAGAGTAGTAAAAAGACGAATGTAACCTTCTTCTTCGTCCTCTAGTTAAATCAATCTGAAAATATTAGTAAAATACTCAAAACGAAACTGAATCAACCCATGCATTCACTTATTGTGCTTTGAAATACATTATAATATGTCCACAGTATTACCAATATACGCTTTTCTATTTATTTACTAAATACGTTTCCCACTCTTTAAATATATAACATATATATAATAGATACAAAGAAACGAAATACAACGTGAGAAGAAATATACAAATGAAGAAGAGTATTATGAAAAGCTAGTATTTTGATGCGCTCGAGTGCCACAGCATATATGGTATCAGTAAGCAGGGTGTAACAAACAAAGCGAAACCAATCCACTCAATTGTATGAGAAGTGAAACGCTTGTTATACTCCTTCAGTCTGTG                                                                                                                                                                                                                                                                                                                                                                                                               ]




>consensus_10646#0
AACTATATGTAATCATATTAACGCACGTACACCATCATGGACAACAATGCAAACGGAAAA
CACTGAAATTCAGGATCAAGAGAATTTTAAGAGTTTTTAGAACTATGGCAATCAAACCAA
TTGGTAGTCAAACATATAGACAGAAATTCGATCCGCTAAACCATATGAAAAAGGTTGGAC
AACCAAATGGTCAGAGACCAACCGAACAAGGCAGTCAAGAGTAGTAAAAAGACGAATGTA
ACCTTCTTCTTCGTCCTCTAGTTAAATCAATCTGAAAATATTAGTAAAATACTCAAAACG
AAACTGAATCAACCCATGCATTCACTTATTGTGCTTTGAAATACATTATAATATGTCCAC
AGTATTACCAATATACGCTTTTCTATTTATTTACTAAATACGTTTCCCACTCTTTAAATA
TATAACATATATATAATAGATACAAAGAAACGAAATACAACGTGAGAAGAAATATACAAA
TGAAGAAGAGTATTATGAAAAGCTAGTATTTTGATGCGCTCGAGTGCCACAGCATATATG
GTATCAGTAAGCAGGGTGTAACAAACAAAGCGAAACCAATCCACTCAATTGTATGAGAAG
TGAAACGCTTGTTATACTCCTTCAGTCTGTGAATTGTAAGTAGACCAGGTGCAGAAGAAT
ACAAAAGGAACTNTTCTGCNAATCAGTAGACTTGTAAAGTATTGTAGCACTAGAAAATTA
TGAACGCCCATTATTTGAGGTTNGAGGGATATGACATGAGTGACGTTCGAGGAGGCAGGT
ACACAGGCCACGAGCAGAGGACTCCCATGATCATGTAANTCTGNNNTCGAAAGATTCAAT
AGCTCACATCTTGGCGCGCGGACTATGGAATNTAATGNATAGAATAGCTTCTTTTCTGAG
ATACTATCAATCTTGAACGCATCGACTGCCNATTGAATCNGACGTATGGCAGACANTACT
ACGAACTACTGCATTGGGCATCTAGNTATNATANGTTGAGTCACAACGAAANGTANAANN
NTCTACTACG

consensusID : consensus_10646#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 939
fasta sequence

                              [TGCATTCACTATTGTGCTTTGAAATACATATAATNATGTCCACAGTATTACCAATATACGCTNTTCTATTTATTTACTAAATACGTTTCCCACTCTTTAAATATATAACATATATATAATAGATCCAAAGAANCGAAATCCAACGTGAGAAGAAATATACAAATGAAGAAGAGTATTATGAANAGCTAGTATTNTGATGCGCTCGAGTGCCACAGCATATATGGTATCAGTAAGCAGGGTGTAACAAACAAAGCGAAACCAATCCACTCAATTGTATGAGAAGTGAAACGCTTGTTATACTCCTTCAGTCTGTGAATTGTAAGTAGACCAGGTGCAGAAGAATACAAAAAGGAACTTTTCTGCAAATCAGTAGACTTGTAAGTAATTGTAGCACTAGAAAAATTATGAACGCCATTTATTTGAGGTTTGAGGATTATGACATGAGTGACGTTCGAGGAGGCAGGTACAACAGGCCACCGAGCAGAAGGACTCCCATGAATCAATGTAAATTCTGTTTCGGAAAAGATATCAAATAGCTCAACATCTTTGGCAGCGCGTCTCAAAGAAAATGCATAACCCAAAAGGTGGTCCGAGTATCAAATACACAACTTTCATCTGCTAAATCGTAAGTATCGATTCGCAAACAATTTTTGAGTCCTCAAAACATTGACGCAATGGGTGCAGCATGGGGGGTCAAATTCAAATGTGTCGAACTAATTGAAAACAATAAGACTCATGGAAATTATAAATTGTATATAGAATAGTCATTTCTTTTTCCTGGAAGATAAACTCATTCAAAATTTCTTTGGAGACCGCCAATCGGACATTGTCCACAGAATCTGAAGATACCAGGACAACCGAATAAATGGCCAACAGGATACCAAAACTAAACCCCATCACGTGAACAGACTTCAAACCTCGTGCCGAATTAATGGCTCG]

[-] EMBL CD081727             [TGCATTCACTATTGTGCTTTGAAATACATATAATNATGTCCACAGTATTACCAATATACGCTNTTCTATTTATTTACTAAATACGTTTCCCACTCTTTAAATATATAACATATATATAATAGATCCAAAGAANCGAAATCCAACGTGAGAAGAAATATACAAATGAAGAAGAGTATTATGAANAGCTAGTATTNTGATGCGCTCGAGTGCCACAGCATATATGGTATCAGTAAGCAGGGTGTAACAAACAAAGCGAAACCAATCCACTCAATTGTATGAGAAGTGAAACGCTTGTTATACTCCTTCAGTCTGTGAATTGTAAGTAGACCAGGTGCAGAAGAATACAAAAAGGAACTTTTCTGCAAATCAGTAGACTTGTAAGTAATTGTAGCACTAGAAAAATTATGAACGCCATTTATTTGAGGTTTGAGGATTATGACATGAGTGACGTTCGAGGAGGCAGGTACAACAGGCCACCGAGCAGAAGGACTCCCATGAATCAATGTAAATTCTGTTTCGGAAAAGATATCAAATAGCTCAACATCTTTGGCAGCGCGTCTCAAAGAAAATGCATAACCCAAAAGGTGGTCCGAGTATCAAATACACAACTTTCATCTGCTAAATCGTAAGTATCGATTCGCAAACAATTTTTGAGTCCTCAAAACATTGACGCAATGGGTGCAGCATGGGGGGTCAAATTCAAATGTGTCGAACTAATTGAAAACAATAAGACTCATGGAAATTATAAATTGTATATAGAATAGTCATTTCTTTTTCCTGGAAGATAAACTCATTCAAAATTTCTTTGGAGACCGCCAATCGGACATTGTCCACAGAATCTGAAGATACCAGGACAACCGAATAAATGGCCAACAGGATACCAAAACTAAACCCCATCACGTGAACAGACTTCAAACCTCGTGCCGAATTAATGGCTCG]
[+] EMBL CD140913             [                                                                                                                                                                                                                                               TGTAACAAACAAAGCGAAACCAATCCACTCAATTGTATGAGAAGTGAAACGCTTGTTATACTCCTTCAGTCTGTGTATTGTAAGTAGACCAGGTGCAGAAGAATACAAAAAGGAACTTTTCTGCAAATCAGTAGACTTGTAAGTAATTGTAGCACTAGAAAAATTATGAACGCCATTTATTTGAGGTTTGAGGATTATGACATGAGTGACGTTCGAGGAGGCAGGTACAACAGGCCACCGAGCAGAAGGACTCCCATGAATCAATGTAAATTCTGTTTCGGAAAAGATATCAAATAGCTCAACATCTTTGGCAGCGCGT                                                                                                                                                                                                                                                                                                                                                                                             ]




>consensus_10646#1
TGCATTCACTATTGTGCTTTGAAATACATATAATNATGTCCACAGTATTACCAATATACG
CTNTTCTATTTATTTACTAAATACGTTTCCCACTCTTTAAATATATAACATATATATAAT
AGATCCAAAGAANCGAAATCCAACGTGAGAAGAAATATACAAATGAAGAAGAGTATTATG
AANAGCTAGTATTNTGATGCGCTCGAGTGCCACAGCATATATGGTATCAGTAAGCAGGGT
GTAACAAACAAAGCGAAACCAATCCACTCAATTGTATGAGAAGTGAAACGCTTGTTATAC
TCCTTCAGTCTGTGAATTGTAAGTAGACCAGGTGCAGAAGAATACAAAAAGGAACTTTTC
TGCAAATCAGTAGACTTGTAAGTAATTGTAGCACTAGAAAAATTATGAACGCCATTTATT
TGAGGTTTGAGGATTATGACATGAGTGACGTTCGAGGAGGCAGGTACAACAGGCCACCGA
GCAGAAGGACTCCCATGAATCAATGTAAATTCTGTTTCGGAAAAGATATCAAATAGCTCA
ACATCTTTGGCAGCGCGTCTCAAAGAAAATGCATAACCCAAAAGGTGGTCCGAGTATCAA
ATACACAACTTTCATCTGCTAAATCGTAAGTATCGATTCGCAAACAATTTTTGAGTCCTC
AAAACATTGACGCAATGGGTGCAGCATGGGGGGTCAAATTCAAATGTGTCGAACTAATTG
AAAACAATAAGACTCATGGAAATTATAAATTGTATATAGAATAGTCATTTCTTTTTCCTG
GAAGATAAACTCATTCAAAATTTCTTTGGAGACCGCCAATCGGACATTGTCCACAGAATC
TGAAGATACCAGGACAACCGAATAAATGGCCAACAGGATACCAAAACTAAACCCCATCAC
GTGAACAGACTTCAAACCTCGTGCCGAATTAATGGCTCG

consensusID : consensus_10646#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 11
consensus length = 760
fasta sequence

                              [GCTGCATGGCATGTTTTTTTTTTTTTTTTTTTTTTTTTTACCAATATACGCTTTTCTATTTATTTACTAAATACGTTTCCCACTCTTTAAATATATAACATATATATAATAGATACAAAGAAACGAAATACAACGTGAGAAGAAATATACAAATGAAGAAGAGTATTATGAAAAGCTAGTATTTTGATGCGCTCGAGTGCCACAGCATATATGGTATCAGTAAGCAGGGTGTAACAAACAAAGCGAAACCAATCCACTCAATTGTATGAGAAGTGAAACGC-TTGTTATACTCCTTCAGTCTGTGAATTGTAAG-TAGACCAGGTGCAGAAGAATACAAAAAGGAACTTTTCTGCAAATCAGTAGACTTGTAAGTAATTGTAGCACTAGAAAAATTATGAACGCCATTTATTTGAGGTTTGAGGATTATGACATGAGTGACGTTCGAGGAGGCAGGTACAACAGGCCACCGAGCAGAAGGACTCCCATGAATCAAT-GTAAATTCTGTTTCGGAAAAGATATCAAATAGCTCAACATCTTTGGCAGCGCGTGACTCATGGAAATTATAAATTGTATATAGAATAGTCATTTCTTTTTCCTGGAAGATAAACTCATTCAAAATTTCTTTGGAGACCGCCAATCGGACATTGTCCACAGAATCTGAAGATACCAGGACAACCGAATAAATGGCCAACAGGATACCAAAACTAAACCCCATCACGTTGAACAGACTTCAAACCTCGTGCCGANAT-AAGGCTCCGAG]

[+] EMBL AI444551             [GCTGCATGGCATGTTTTTTTTTTTTTTTTTTTTTTTTTTACCAATATACGCTTTTCTATTTATTTACTAAATACGTTTCCCACTCTTTAAATATATAACATATATATAATAGATACAAAGAAACGAAATACAACGTGAGAAGAAATATACAAATGAAGAAGAGTATTATGAAAAGCTAGTATTTTGATGCGCTCGAGTGCCACAGCATATATGGTATCAGTAAGCAGGGTGTAACAAACAAAGCGAAACCAATCCACTCAATTGTATGAGAAGTGAAACGCTTTGTTATACTCCTGCAGTCTGTGAATTGTAAGATAGACCAGGTGCAGAAGAATAC AAAAGGACTTTTTCTGCAAATCAGTAGACTTGTAAGTAATTGGAGCACCAG AAAATTATGCACGCCATTTA TTGAGGTTTGAGGATTATGACATGAGTGACGTTCGAGGAGGCAGGTACAACAGGCCACCGAGCAGAAGGCCTCCCATGAACCAATGGTAAATTCTGTTGCGG AAAGAT TNCAATAGC CCACATC TTGGGAGCCGGTGACTCAHGG AATTTTAAA TGGGTATAGAATGGTCA TGCTTTTg                                                                                                                                                                       ]
[-] EMBL CD081695             [                                           ATATACGCTTTTCTATTTATTTACTAAATACGTTTCCCACTCTTTAAATATATAACATATATATAATAGATACAAAGAAACGAAATACAACGTGAGAAGAAATATACAAATGAAGAAGAGTATTATGAAAAGCTAGTATTTTGATGCGCTCGAGTGCCACAGCATATATGGTATCAGTAAGCAGGGTGTAACAAACAAAGCGAAACCAATCCACTCAATTGTATGAGAAGTGAAACGC TTGTTATACTCCTTCAGTCTGTGAATTGTAAG TAGACCAGGTGCAGAAGAATACAAAAAGGAACTTTTCTGCAAATCAGTAGACTTGTAAGTAATTGTAGCACTAGAAAAATTATGAACGCCATTTATTTGAGGTTTGAGGATTATGACATGAGTGACGTTCGAGGAGGCAGGTACAACAGGCCACCGAGCAGAAGGACTCCCATGAATCAAT GTAAATTCTGTTTCGGAAAAGATATCAAATAGCTCAACATCTTTGGCAGCGCGTGACTCATGGAAATTATAAATTGTATATAGAATAGTCATTTCTTTTTCCTGGAAGATAAACTCATTCAAAATTTCTTTGGAGACCGCCAATCGGACATTGTCCACAGAATCTGAAGATACCAGGACAACCGAATAAATGGCCAACAGGATACCAAAACTAAACCCCATCACG TGCACAGACTTCAAACCTCGTGCCGANAT AAGGCT     ]
[-] EMBL CD080378             [                                                                       TACGTTTCCCACTCTTTAAATATATAACATATATATAATAGATCCAAAGAAACGAAATNCAACGTGAGAAGAAATATACAAATGAAGAAGAGTATTATGAAAAGCTAGTATTTTGATGCGCTCGAGTGCCACAGCATATATGGTATCAGTAAGCAGGGTGTAACAAACAAAGCGAAACCAATCCACTCAATTGTATGAGAAGTGAAACGC TTGTTATACTCCTTCAGTCTGTGAATTGTAAG TAGACCAGGTGCAGAAGAATACAAAAAGGAACTTTTCTGCAAATCAGTAGACTTGTAAGTAATTGTAGCACTAGAAAAATTATGAACGCCATTTATTTGAGGTTTGAGGATTATGACATGAGTGACGTTCGAGGAGGCAGGTACAACAGGCCACCGAGCAGAAGGACTCCCATGAATCAAT GTAAATTCTGTTTCGGAAAAGATATCAAATAGCTCAACATCTTTGGCAGCGCGTGACTCATGGAAATTATAAATTGTATATAGAATAGTCATTTCTTTTTCCTGGAAGATAAACTCATTCAAAATTTCTTTGGAGACCGCCAATCGGACATTGTCCACAGAATCTGAAGATACCAGGACAACCGAATAAATGGCCAACAGGATACCAAAACTAAACCCCATCACGTTGAACAGACTTC AACCTCGTGCCGA ATNTTGGCTCCGAG]
[-] EMBL CD080390             [                                                                       TACGTTTCCCACTCTTTAAATATATAACATATATATAATAGATCCAAAGAANCGAAATNCAACGTGAGAAGAAATATACAAATGAAGAAGAGTATTATGAAAAGCTAGTATTTTGATGCGCTCGAGTGCCACAGCATATATGGTATCAGTAAGCAGGGTGTAACAAACAAAGCGAAACCAATCCACTCAATTGTATGAGAAGTGAAACGC TTGTTATACTCCTTCAGTCTGTGAATTGTAAG TAGACCAGGTGCAGAAGAATACAAAAAGGAACTTTTCTGCAAATCAGTAGACTTGTAAGTAATTGTAGCACTAGAAAAATTATGAACGCCATTTATTTGAGGTTTGAGGATTATGACATGAGTGACGTTCGAGGAGGCAGGTACAACAGGCCACCGAGCAGAAGGACTCCCATGAATCAAT GTAAATTCTGTTTCGGAAAAGATATCAAATAGCTCAACATCTTTGGCAGCGCGTGACTCATGGAAATTATAAATTGTATATAGAATAGTCATTTCTTTTTCCTGGAAGATAAACTCATTCAAAATTTCTTTGGAGACCGCCAATCGGACATTGTCCACAGAATCTGAAGATACCAGGACAACCGAATAAATGGCCAACAGGATACCAAAACTAAACCCCATCACGTTGAACAGACTTCAA                           ]
[+] EMBL AI067244             [                                                                          GTTTCCCACTCTTTAAATATATAACATATATATAATAGATACAAAGAAACGAAATACAACGTGAGAAGAAATATACAAATGAAGAAGAGTATTATGAAAAGCTAGTATTTTGATGCGCTCGAGTGCCACAGCATATATGGTATCAGTAAGCAGGGTGTAACAAACAAAGCGAAACCAATCCACTCAATTGTATGAGAAGTGAAACGC TTGTTATACTCCTTCAGTCTGTGAATTGTAAG TAGACCAGGTGCAGAAGAATACAAAAAGGAACTTTTCTGCAAATCAGTAGACTTGTAAGTAATTGTAGCACTAGAAAAATTATGAACGCCATTTATTTGAGGTTTGAGGATTATGACATGAGTGACGTTCGAGGAGGCAGGTACAACAGGCCACCGAGCAGAAGGACTCCCATGAATCAAT GTAAATTCTGTTTCGGAAAAGATATCAAATAGCTCAACATCTTTGGCAGCGCGTGACTCATGGAAATTATAAATTGTATATAGAAAAGTCATTTCTTTTTCCTGGAAGATAAAC                                                                                                                                                         ]
[+] EMBL AI067776             [                                                                          GTTTCCCACTCTTTAAATATATAACATATATATAATAGATACAAAGAAACGAAATACAACGTGAGAAGAAATATACAAATGAAGAAGAGTATTATGAAAAGCTAGTATTTTGATGCGCTCGAGTGCCACAGCATATATGGTATCAGTAAGCAGGGTGTAACAAACAAAGCGAAACCAATCCACTCAATTGTATGAGAAGTGAAACGC TTGTTATACTCCTTCAGTCTGTGAATTGTAAG TAGACCAGGTGCAGAAGAATACAAAAAGGAACTTTTCTGCAAATCAGTAGACTTGTAAGTAATTGTAGCACTAGAAAAATTATGAACGCCATTTATTTGAGGTTTGAGGATTATGACATGAGTGACGTTCGAGGAGGCAGGTACAACAGGCCACCGAGCAGAATGACTCCCAT                                                                                                                                                                                                                                                                                    ]
[+] EMBL AI068273             [                                                                          GTTTCCCACTCTTTAAATATATAACATATATATAATAGATACAAAGAAACGAAATACAACGTGAGAAGAAATATACAAATGAAGAAGAGTATTATGAAAAGCTAGTATTTTGATGCGCTCGAGTGCCACAGCATATATGGTATCAGTAAGCAGGGTGTAACAAACAAAGCGAAACCAATCCACTCAATTGTATGAGAAGTGAAACGC TTGTTATACTCCTTCAGTCTGTGAATTGTAAG TAGACCAGGTGCAGAAGAATACACAACAGAACTTTTCTGCAAATCAGTAGACTTGTGAGTAATTGTAGCACTAGGAAAATTATGAACGCCATTTATTTGACGTTTGAGGATTATGAC                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL AI068274             [                                                                          GTTTCCCACTCTTTAAATATATAACATATATATAATAGATACAAAGAAACGAAATACAACGTGAGAAGAAATATACAAATGAAGAAGAGTATTATGAAAAGCTAGTATTTTGATGCGCTCGAGTGCCACAGCATATATGGTATCAGTAAGCAGGGTGTAACAGACAAAGCGAAACCAATCCACTCAATTGTATGAGAAGTGAAACGC TTGTTATACTCCTTCAGTCTGTGAATTGTAAG TAGACCAGGTGCAGAAGAATACANAAAGGAACTTTTCTGCAAATCAGTAGACTTGTAAGTAATTGTAGCACTAG AAAATTATGAACG CATTTATTTGACGTTTGACGATTATG                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL AI067107             [                                                                          GTTTCCCACTCTTTAAATATATAACATATATATAATAGATACAAAGAAACGAAATACAACGTGAGAAGAAATATACAAATGAAGAAGAGTATTATGAAAAGCTAGTATTTTGATGCGCTCGAGTGCCACAGCATATATGGTATCAGTAAGCAGGGTGTAACAAACAAAGCGAAACCAATCCACTCAATTGTATGAGAAGTGAAACGC TTGTTATACTCCTTCAGTCTGTGAATTGTAAG TAGACCAGGTGCAGAAGAATACAGAAAGGAACTTTTCTGCAAATCAGTAGACTTGTAAGTAATTGTAGCACTAGAAAGATT                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL AI067394             [                                                                          GTTTCCCACTCTTTAAATATATAACATATATATAATAGATACAAAGAAACGAAATACAACGTGAGAAGAAATATACAAATGAAGAAGAGTATTATGAAAAGCTAGTATTTTGATGCGCTCGAGTGCCACAGCATATATGGTATCAGTAAGCAGGGTGTAACAAACATAGCGAAACCAATCCACTCAATTGTATGAGAAGTGAAACGC TTGTTATACTCCGTCAGTCTGTGAATTGTAAG TAGACCAGGTGCAGAAGAATACAAAAAGGAACTTTTCTGCAAGTCAGTAGACTTGTAAGTAATTGTAGCACTAGAAA                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CD133707             [                                                                                                                                                                                                                                                                                                                                  GGTGCAGAAGAATACAAAAAGGAACTTTTCTGCAAATCAGTAGACTTGTAAGTAATTGTAGCACTAGAAAAATTATGAACGCCATTTATTTGAGGTTTGAGGATTATGACATGAGTGACGTTCGAGGAGGCAGGTACAACAGGCCACCGAGCAGAAGGACTCCCATGAATCAAT GTAAATTCTGTTTCGGANAAGATATCAAATAGCTCAACATCTTTGGCAGCGCGTGACTCATGGAAATTATAAATTGTATATAGAATAGTCA                                                                                                                                                                                ]




>consensus_10646#2
GCTGCATGGCATGTTTTTTTTTTTTTTTTTTTTTTTTTTACCAATATACGCTTTTCTATT
TATTTACTAAATACGTTTCCCACTCTTTAAATATATAACATATATATAATAGATACAAAG
AAACGAAATACAACGTGAGAAGAAATATACAAATGAAGAAGAGTATTATGAAAAGCTAGT
ATTTTGATGCGCTCGAGTGCCACAGCATATATGGTATCAGTAAGCAGGGTGTAACAAACA
AAGCGAAACCAATCCACTCAATTGTATGAGAAGTGAAACGCTTGTTATACTCCTTCAGTC
TGTGAATTGTAAGTAGACCAGGTGCAGAAGAATACAAAAAGGAACTTTTCTGCAAATCAG
TAGACTTGTAAGTAATTGTAGCACTAGAAAAATTATGAACGCCATTTATTTGAGGTTTGA
GGATTATGACATGAGTGACGTTCGAGGAGGCAGGTACAACAGGCCACCGAGCAGAAGGAC
TCCCATGAATCAATGTAAATTCTGTTTCGGAAAAGATATCAAATAGCTCAACATCTTTGG
CAGCGCGTGACTCATGGAAATTATAAATTGTATATAGAATAGTCATTTCTTTTTCCTGGA
AGATAAACTCATTCAAAATTTCTTTGGAGACCGCCAATCGGACATTGTCCACAGAATCTG
AAGATACCAGGACAACCGAATAAATGGCCAACAGGATACCAAAACTAAACCCCATCACGT
TGAACAGACTTCAAACCTCGTGCCGANATAAGGCTCCGAG

consensusID : consensus_10646#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 315
fasta sequence

                              [TTTTTTTTTTTTTTTTCAAATGAAGAAGAGTATTATGAAAAGCTAGTATTTTGATGCGCTCGAGTGCCACAGCATATATGGTATCAGTAAGCAGGGTGTAACAAACAAAGCGAAACCAATCCACTCAATTGTATGAGAAGTGAAACGCTTGTTATACTCCTTCAGTCTGTGAATTGTAAGTAGACCAGGTGCAGAAGAATACAACAAGGAACTTTTCTGCAAATCAGTAGACTTGTAAGTAATTGTAGCACTAGAAAAATTATGAACGCAATTTATTTAGGTTTGAGGATTATGACATGAGTGACGTTCCAGGAG]

[+] EMBL AI395275             [TTTTTTTTTTTTTTTTCAAATGAAGAAGAGTATTATGAAAAGCTAGTATTTTGATGCGCTCGAGTGCCACAGCATATATGGTATCAGTAAGCAGGGTGTAACAAACAAAGCGAAACCAATCCACTCAATTGTATGAGAAGTGAAACGCTTGTTATACTCCTTCAGTCTGTGAATTGTAAGTAGACCAGGTGCAGAAGAATACAACAAGGAACTTTTCTGCAAATCAGTAGACTTGTAAGTAATTGTAGCACTAGAAAAATTATGAACGCAATTTATTTAGGTTTGAGGATTATGACATGAGTGACGTTCCAGGAG]




>consensus_10646#3
TTTTTTTTTTTTTTTTCAAATGAAGAAGAGTATTATGAAAAGCTAGTATTTTGATGCGCT
CGAGTGCCACAGCATATATGGTATCAGTAAGCAGGGTGTAACAAACAAAGCGAAACCAAT
CCACTCAATTGTATGAGAAGTGAAACGCTTGTTATACTCCTTCAGTCTGTGAATTGTAAG
TAGACCAGGTGCAGAAGAATACAACAAGGAACTTTTCTGCAAATCAGTAGACTTGTAAGT
AATTGTAGCACTAGAAAAATTATGAACGCAATTTATTTAGGTTTGAGGATTATGACATGA
GTGACGTTCCAGGAG

consensusID : consensus_10646#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 124
fasta sequence

                              [ATTAGCGGGTATTTTGAAGTCTGTTCAACGTGATGGGGTTTAGTTTTGGTATCCTGTTGGCCATTTATTCGGTTGTCCTGGTATCTTCAGATTCTGTGGACAATGTCCGAATTGGCGTCCTCCA]

[+] EMBL CD162861             [ATTAGCGGGTATTTTGAAGTCTGTTCAACGTGATGGGGTTTAGTTTTGGTATCCTGTTGGCCATTTATTCGGTTGTCCTGGTATCTTCAGATTCTGTGGACAATGTCCGAATTGGCGTCCTCCA]




>consensus_10646#4
ATTAGCGGGTATTTTGAAGTCTGTTCAACGTGATGGGGTTTAGTTTTGGTATCCTGTTGG
CCATTTATTCGGTTGTCCTGGTATCTTCAGATTCTGTGGACAATGTCCGAATTGGCGTCC
TCCA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10646#1      ------------------------------------------------------------
consensus_10646#2      ------------------------------------------------------------
consensus_10646#3      ------------------------------------------------------------
consensus_10646#0      AACTATATGTAATCATATTAACGCACGTACACCATCATGGACAACAATGCAAACGGAAAA 60
consensus_10646#4      ------------------------------------------------------------
                                                                                   

consensus_10646#1      ------------------------------------------------------------
consensus_10646#2      ------------------------------------------------------------
consensus_10646#3      ------------------------------------------------------------
consensus_10646#0      CACTGAAATTCAGGATCAAGAGAATTTTAAGAGTTTTTAGAACTATGGCAATCAAACCAA 120
consensus_10646#4      ------------------------------------------------------------
                                                                                   

consensus_10646#1      ------------------------------------------------------------
consensus_10646#2      ------------------------------------------------------------
consensus_10646#3      ------------------------------------------------------------
consensus_10646#0      TTGGTAGTCAAACATATAGACAGAAATTCGATCCGCTAAACCATATGAAAAAGGTTGGAC 180
consensus_10646#4      ------------------------------------------------------------
                                                                                   

consensus_10646#1      ------------------------------------------------------------
consensus_10646#2      ------------------------------------------------------------
consensus_10646#3      ------------------------------------------------------------
consensus_10646#0      AACCAAATGGTCAGAGACCAACCGAACAAGGCAGTCAAGAGTAGTAAAAAGACGAATGTA 240
consensus_10646#4      ------------------------------------------------------------
                                                                                   

consensus_10646#1      ------------------------------------------------------------
consensus_10646#2      ------------------------------------------------------------
consensus_10646#3      ------------------------------------------------------------
consensus_10646#0      ACCTTCTTCTTCGTCCTCTAGTTAAATCAATCTGAAAATATTAGTAAAATACTCAAAACG 300
consensus_10646#4      ------------------------------------------------------------
                                                                                   

consensus_10646#1      ----------------TGCATTCACT-ATTGTGCTTTGAAATACATATAATNATGTCCAC 43
consensus_10646#2      ---------------------------GCTGCATGGCATGTTTTTTTTTTTTTTTTTTTT 33
consensus_10646#3      ------------------------------------------------------------
consensus_10646#0      AAACTGAATCAACCCATGCATTCACTTATTGTGCTTTGAAATACATTATAATATGTCCAC 360
consensus_10646#4      ------------------------------------------------------------
                                                                                   

consensus_10646#1      AGTATTACCAATATACGCTNTTCTATTTATTTACTAAATACGTTTCCCACTCTTTAAATA 103
consensus_10646#2      TTTTTTACCAATATACGCTTTTCTATTTATTTACTAAATACGTTTCCCACTCTTTAAATA 93
consensus_10646#3      ------------------------------------------------------------
consensus_10646#0      AGTATTACCAATATACGCTTTTCTATTTATTTACTAAATACGTTTCCCACTCTTTAAATA 420
consensus_10646#4      ------------------------------------------------------------
                                                                                   

consensus_10646#1      TATAACATATATATAATAGATCCAAAGAANCGAAATCCAACGTGAGAAGAAATATACAAA 163
consensus_10646#2      TATAACATATATATAATAGATACAAAGAAACGAAATACAACGTGAGAAGAAATATACAAA 153
consensus_10646#3      ----------------------------------------TTTTTTTTTTTTTTTTCAAA 20
consensus_10646#0      TATAACATATATATAATAGATACAAAGAAACGAAATACAACGTGAGAAGAAATATACAAA 480
consensus_10646#4      ------------------------------------------------------------
                                                                                   

consensus_10646#1      TGAAGAAGAGTATTATGAANAGCTAGTATTNTGATGCGC-TCGAGTGCCACAGCATATAT 222
consensus_10646#2      TGAAGAAGAGTATTATGAAAAGCTAGTATTTTGATGCGC-TCGAGTGCCACAGCATATAT 212
consensus_10646#3      TGAAGAAGAGTATTATGAAAAGCTAGTATTTTGATGCGC-TCGAGTGCCACAGCATATAT 79
consensus_10646#0      TGAAGAAGAGTATTATGAAAAGCTAGTATTTTGATGCGC-TCGAGTGCCACAGCATATAT 539
consensus_10646#4      -----------------ATTAGCGGGTATTTTGAAGTCTGTTCAACGTGATGGGGTTTA- 42
                                        *  ***  ***** *** *    *  *  *  *  *  * ** 

consensus_10646#1      GGTATCAGTAAGCAGGGTGTAACAAACAAAGCGAAACCAATCCACTCA-ATTGTATGAGA 281
consensus_10646#2      GGTATCAGTAAGCAGGGTGTAACAAACAAAGCGAAACCAATCCACTCA-ATTGTATGAGA 271
consensus_10646#3      GGTATCAGTAAGCAGGGTGTAACAAACAAAGCGAAACCAATCCACTCA-ATTGTATGAGA 138
consensus_10646#0      GGTATCAGTAAGCAGGGTGTAACAAACAAAGCGAAACCAATCCACTCA-ATTGTATGAGA 598
consensus_10646#4      -GTTTTGGTATCCTGTTGGCCATTTATTCGGTTGTCCTGGTATCTTCAGATTCTGTGGAC 101
                        ** *  ***  * *   *  *   *    *     *   *    *** *** * **   

consensus_10646#1      AGTGAAACGCTTGTTATACTCCTTCAGTCTGTGAATTGTAAGTAGACCAGGTGCAGAAGA 341
consensus_10646#2      AGTGAAACGCTTGTTATACTCCTTCAGTCTGTGAATTGTAAGTAGACCAGGTGCAGAAGA 331
consensus_10646#3      AGTGAAACGCTTGTTATACTCCTTCAGTCTGTGAATTGTAAGTAGACCAGGTGCAGAAGA 198
consensus_10646#0      AGTGAAACGCTTGTTATACTCCTTCAGTCTGTGAATTGTAAGTAGACCAGGTGCAGAAGA 658
consensus_10646#4      AATGTCCGAATTGGCGTCCTCCA------------------------------------- 124
                       * **      ***   * ****                                      

consensus_10646#1      ATACAAAAAGGAACTTTTCTGCAAATCAGTAGACTTGTAAGTAATTGTAGCACTAGAAAA 401
consensus_10646#2      ATACAAAAAGGAACTTTTCTGCAAATCAGTAGACTTGTAAGTAATTGTAGCACTAGAAAA 391
consensus_10646#3      ATACAACAAGGAACTTTTCTGCAAATCAGTAGACTTGTAAGTAATTGTAGCACTAGAAAA 258
consensus_10646#0      ATACAA-AAGGAACTNTTCTGCNAATCAGTAGACTTGTAAAGTATTGTAGCACTAGAAAA 717
consensus_10646#4      ------------------------------------------------------------
                                                                                   

consensus_10646#1      ATTATGAACGCCATTTATTTGAGGTTTGAGGATTATGACATGAGTGACGTTCGAGGAGGC 461
consensus_10646#2      ATTATGAACGCCATTTATTTGAGGTTTGAGGATTATGACATGAGTGACGTTCGAGGAGGC 451
consensus_10646#3      ATTATGAACGCAATTTATTT-AGGTTTGAGGATTATGACATGAGTGACGTTCCAGGAG-- 315
consensus_10646#0      -TTATGAACGCCCATTATTTGAGGTTNGAGGGATATGACATGAGTGACGTTCGAGGAGGC 776
consensus_10646#4      ------------------------------------------------------------
                                                                                   

consensus_10646#1      AGGTACAACAGGCCACCGAGCAGAAGGACTCCCATGAATCAATGTAAATTCTGTTTCGGA 521
consensus_10646#2      AGGTACAACAGGCCACCGAGCAGAAGGACTCCCATGAATCAATGTAAATTCTGTTTCGGA 511
consensus_10646#3      ------------------------------------------------------------
consensus_10646#0      AGGTACA-CAGGCCAC-GAGCAGA-GGACTCCCATGATC--ATGTAANTCTGNNNTCGAA 831
consensus_10646#4      ------------------------------------------------------------
                                                                                   

consensus_10646#1      AAAGATATCAAATAGCTCAACATCTTTGGCAGCGCGTCTCAAAGAAAATGCATAACCCAA 581
consensus_10646#2      AAAGATATCAAATAGCTCAACATCTTTGGCAGCGCGT----------------------- 548
consensus_10646#3      ------------------------------------------------------------
consensus_10646#0      AGA----TTCAATAGCTCA-CATCTT----GGCGCGC----------------------- 859
consensus_10646#4      ------------------------------------------------------------
                                                                                   

consensus_10646#1      AAGGTGGTCCGAGTATCAAATACACAACTTTCATCTGCTAAATCGTAAGTATCGATTCGC 641
consensus_10646#2      ------------------------------------------------------------
consensus_10646#3      ------------------------------------------------------------
consensus_10646#0      ------------------------------------------------------------
consensus_10646#4      ------------------------------------------------------------
                                                                                   

consensus_10646#1      AAACAATTTTTGAGTCCTCAAAACATTGACGCAATGGGTGCAGCATGGGGGGTCAAATTC 701
consensus_10646#2      ------------------------------------------------------------
consensus_10646#3      ------------------------------------------------------------
consensus_10646#0      ------------------------------------------------------------
consensus_10646#4      ------------------------------------------------------------
                                                                                   

consensus_10646#1      AAATGTGTCGAACTAATTGAAAACAATAAGACTCATGGAAATTATAAATTGTATATAGAA 761
consensus_10646#2      -----------------------------GACTCATGGAAATTATAAATTGTATATAGAA 579
consensus_10646#3      ------------------------------------------------------------
consensus_10646#0      -----------------------------GGACTATGGAATNTA------ATGNATAGAA 884
consensus_10646#4      ------------------------------------------------------------
                                                                                   

consensus_10646#1      TAGTCATTTCTTTTTCCTGGAAGATAAACTCATTCAAAATTTCTTTGGAGACCGCCAATC 821
consensus_10646#2      TAGTCATTTCTTTTTCCTGGAAGATAAACTCATTCAAAATTTCTTTGGAGACCGCCAATC 639
consensus_10646#3      ------------------------------------------------------------
consensus_10646#0      TAGCT-----TCTTTTCTG--AGATACTATCAATCTTGAACGCATCG---ACTGCCNATT 934
consensus_10646#4      ------------------------------------------------------------
                                                                                   

consensus_10646#1      GGACATTGTCCACAGAATCTGAAGATACCAGGACAACCGAATAAATGGCCAACAGGATAC 881
consensus_10646#2      GGACATTGTCCACAGAATCTGAAGATACCAGGACAACCGAATAAATGGCCAACAGGATAC 699
consensus_10646#3      ------------------------------------------------------------
consensus_10646#0      GAATCNGACGTATGGCAGACANTACTAC--GAACTACTGCAT---TGGGCATCTAGNTAT 989
consensus_10646#4      ------------------------------------------------------------
                                                                                   

consensus_10646#1      CA-AAACTAAACCCCATCACGT-GAACAGACTTCAAACCTCGTGCCGAATTAATGGCTCG 939
consensus_10646#2      CA-AAACTAAACCCCATCACGTTGAACAGACTTCAAACCTCGTGCCGANATAAGGCTCCG 758
consensus_10646#3      ------------------------------------------------------------
consensus_10646#0      NATANGTTGAGTCACAACGAAANGTANAANNNTCTA-CTACG------------------ 1030
consensus_10646#4      ------------------------------------------------------------
                                                                                   

consensus_10646#1      --
consensus_10646#2      AG 760
consensus_10646#3      --
consensus_10646#0      --
consensus_10646#4      --