cluster # 10665

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Schistosoma mansoni
cluster # 10665 cluster # 10665 Sequences # 19 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10665#0 length = 1862 sequences # 18

consensus_10665#1 length = 236 sequences # 1

consensusID : consensus_10665#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 18
consensus length = 1862
fasta sequence

                              [ATTGGCACACGATCGATCCTTATGAAAGCCAGTTTGTTGATCTTGAAGTTGAGCGTCTACTGAATCTTTCATTCGGTTCAGAAGCGCTGTTGAAAACTTCGCCTAGAACTGAAAGTAATTTGATCCCTTTTTAATTCCCTCTTCCTTGTGGTATCTTGATGAGTTATCGCTCTTTTCGCGTTGCTTGTACTTGTTATTCCTCCTAAGTTTCCCTGGAGCATTTTTGCAGTTGCCTACTTATCAGAATTTAATGGTTCGACCACTATGTTGTCTGGTCCTCCTGTTTTACCGTTCCAATTTGTCTATTAAGCCTCATGCCTCATTTCCTGAAAATTCTTATGCTGTGGATTCATTGTCTACATGGGCTAATCGCACAGAGCGAAAAAGTGAAACAGTTTCCAAGGATGATTCTGATAAGTTCTCGCAATCACGTAAAGAGTTCTACGAGGTAAATCAAGACACCTTTGAAGAGGATACTCCACATGGAGATGGATTTACAAAAGTTGTCTCAAAAGCTAGCAAGTATTTTGCCCGTCGACGAATGCAGCAAGAAGTTTCAGTTTCTGGTGACTTGAGCACAAGAAGGTCGAATGGTTTCTCTAGAAATATTGGAA-ATGTAACCCAAGTATATTCCAAGGAGGGTTCAACCTTAACTACCACTCTTTCACAAAATTATGTACATACAAATGACCATAAAAGTCAATCAAGTGGTTTGTTAAGAAGTTTGTCGGGTAAAAAGAAGTGTCTCCCCACTAAAGTAAGTTTTATGGGTCCACCATTATGTTTGGACGCAACTTCATCAGTATGCACTGTTACAACTTCTATTTTGTCTGGTCAAACTAACCAACCAGTTCCTTGTAGCAGCAGTTTGTCAGCCACACCTACATCATCTGTACTGCAGAAGATTTCTTTCTCGACTACTCGCACTTGGTCGAAAGTTGTCGGTACAAAGTTTGCAAAAGTCCCACCTGAAAATCATGGTGACTCTACGAAAACCTCATCGTCAGTTTTACTTAATTCAAATTCAGTCTGGCAAACAGAACATTCAAACCACGTAATTACTGAGGAATCCAATGAAGATAAAAAATTATTAGACAACACAGCCACTACAACAACCAGTAACACAGATTCAGTGGTGAAATGCTCTTATGCTTCCATGCAATCGTTATGGTCGATAGGCGATAGCATACCTCAAGCAAACAAAAATCATTCAACCAATAGTACTTTGCTCTTGGCTAGTAGCACAGTTCAGGGTACGGTTGTCCCTTCTGTTGGTCCGCTATGTACTGTTAGTCCTTCGACTACATTCTCATCTCAAATTTCTAATAACATTTGTAAGGTCAAGCCTCAACAACAACAGCTTC-TTCAGGTTAC-T-CCATCTCACCTCTTATTTCAACTTCTATGCACTTAAACCTTCTTAGCCCGTCTAATAATAATATTATTGAGAATATCTCCACCGCAGATTTGATAGCAGAAACAGAAAGATCTGATTTCGAATGTTGTGGTGACATTGGACGTCCTAATGCCCTTTTAAGACCGCATACCTCAGATAACCTTCAAAATTTAACAACTTTATCCAGTAACGCTTTTCAGTCTTGGTCTTCCTCAAATGCTCTATATACACCATTCTCTTTATCAAATGTTCCTATAAATCGTCACGAAAGCAACATGTTTTCCGGTAACGTTTGGCCTACAGCTGATCAAAGTATGGATATGAATATAAATTGCATGACAGGTTCGTATAATACTAATTCTAACCAACCACACTTTCAAAATCAATTGAGTTCTAATATTCTTTCAAGTGTTTTAACTCACAATAATACCACCCCATCATTGGATGGCATGACTAAGCAATCGAATAT]

[-] EMBL CD084630             [ATTGGCACACGATCGATCCTTATGAAAGCCAGTTTGTTGATCTTGAAGTTGAGCGTCTACTGAATCTTTCATTCGGTTCAGAAGCGCTGTTGAAAACTTCGCCTAGAACTGAAAGTAATTTGATCCCTTTTTAATTCCCTCTTCCTTGTGGTATCTTGATGAGTTATCGCTCTTTTCGCGTTGCTTGTACTTGTTATTCCTCCTAAGTTTCCCTGGAGCATTTTTGCAGTTGCCTACTTATCAGAATTTAATGGTTCGACCACTATGTTGTCTGGTCCTCCTGTTTTACCGTTCCAATTTGTCTATTAAGCCTCATGCCTCATTTCCTGAAAATTCTTATGCTGTGGATTCATTGTCTACATGGGCTAATCGCACAGAGCGAAAAAGTGAAACAGTTTCCAAGGATGATTCTGATAAGTTCTCGCAATCACGTAAAGAGTTCTACGAGGTAAATCAAGACACCTTTGAAGAGGATACTCCACATGGAGATGGATTTACAAAAGTTGTCTCAAAAGCTAGCAAGTATTTTGCCCGTCGACGAATGCAGCAAGAAGTTTCAGTTTCTGGTGACTTGAGCACAAGAAGGTCGAATGGTTTCTCTAGAAATATTGGAAGATGTAACC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL CD195843             [                                                                                                                                                                                                                                                                                                                                                                                                                            GATAAGTTCTCGCAATCACGTAAAGAGTTCTACGAGGTAAATCAAGACACCTTTGAAGAGGATACTCCACATGGAGATGGATTTACAAAAGTTGTCTCAAAAGCTAGCAAGTATTTTGCCCGTCGACGAATGCAGCAAGAAGTTTCAGTTTCTGGTGACTTGAGCACAAGAAGGTCGAATGGTTTCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[-] EMBL CD160311             [                                                                                                                                                                                                                                                                                                                                                                                                                             ATAAGTTCTCGCAATCACGTAAAGAGTTCTACGAGGTAAATCAAGACACCTTTGAAGAGGATACTCCACATGGAGATGGATTTACAAAAGTTGTCTCAAAAGCTAGCAAGTATTTTGCCCGTCGACGAATGCAGCAAGAAGTTTCAGTTTCTGGTGACTTGAGCACAAGAAGGTCGAATGGTTTCTCTAGAAATATTGGAA ATGTAACCCAAGTATATTCCAAGGAGGGTTCAACCTTAACTACCACTCTTTCACAAAATTATGTACATACAAATGACCATAAAAGTCAATCAAGTGGTTTGTTAAGAAGTTTGTCGGGTAAAAAGAAGTGTCTCCCCACTAAAGTAAGTTTTATGGGTCCACCATTATGTTTGGACGCAACTTCATCAGTATGCACTGTTACAACTTCTATTTTGTCTGGTCAAACTAACCAACCAGTTCCTTGTAGCAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL CD160325             [                                                                                                                                                                                                                                                                                                                                                                                                                                        CAATCACGTAAAGAGTTCTACGAGGTAAATCAAGACACCTTTGAAGAGGATACTCCACATGGAGATGGATTTACAAAAGTTGTCTCAAAAGCTAGCAAGTATTTTGCCCGTCGACGAATGCAGCAAGAAGTTTCAGTTTCTGGTGACTTGAGCACAAGAAGGTCGAATGGTTTCTCTAGAAATATTGGAA ATGTAACCCAAGTATATTCCAAGGAGGGTTCAACCTTAACTACCACTCTTTCACAAAATTATGTACATACAAATGACCATAAAAGTCAATCAAGTGGTTTGTTAAGAAGTTTGTCGGGTAAAAAGAAGTGTCTCCCCACTAAAGTAAGTTTTATGGGTCCACCATTATGTTTGGACGCAACTTCATCAGTATGCACTGTTACAACTTCTATTTTGTCTGGTCAAACTAACCAACCAGTTCCTTGTAGCAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL CD160371             [                                                                                                                                                                                                                                                                                                                                                                                                                                                TAAAGAGTTCTACGAGGTAAATCAAGACACCTTTGAAGAGGATACTCCACATGGAGATGGATTTACAAAAGTTGTCTCAAAAGCTAGCAAGTATTTTGCCCGTCGACGAATGCAGCAAGAAGTTTCAGTTTCTGGTGACTCGAGCACAAGAAGGTCGAATGATTTCTCTAGAAATATTGGAA ATGTAACCCAAGTATATTCCAAGGAGGGTTCAACCTTCACTACCACTCTTTCACAAAATTATGTACATACAAATGACCATAAAAGTCAATCAAGTGGTTTGTTAAGAAGTTTGTCGGGTAAAAAGAAGTGTCTCCCCAGTAAAGTAAGTTTTATGGGTCCAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CD163836             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                  AAATCAAGACACCTTTGGAGAGGATACTCCACATGGAGATGGATTTACAAAAGTTGTCTCAAAAGCTAGCAAGTATTTTGCCCGTCGACGAATGCAGCAAGAAGTTTCAGTTTCTGGTGACTTGAGCACAAGAAGGTCGAATGGTTTCTCTAGAAATATTGGAA ATGTAACCCAAGTATATTCCAAGGAGGGTTCAACCTTAACTACCACTCTTTCACAAAATTATGTACATACAAATGACCATAAAAGTCAATCAAGTGGTTTGTTAAGAAGTTTGTCGGGTAAAAAGAAGTGTCTCCCCACTAAAGTAAGTTTTATGGGTCCACCATTATGTTTGGACGCAACTTCATCAGTATGCACTGTTACAACTTCTATTTTGTCTGGTCAAACTAACCAACCAGTTCCTTGTAGCAGCAGTTTGTCAGCCACACCTACATCATCTGTACTGCAGAAGATTTCTTTCTCGACTACTCGCACTTGGTCGAAAGTTGTCGGTACANAGTTTGCAAAAGTCCCACCTGAAAATCATGGTGACTCTACGAAAACCTCATCGTCAGTcg                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[-] EMBL CD160303             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 AGCTAGCAAGTATTTTGCCCGTCGACGAATGCAGCAAGAAGTTTCAGTTTCTGGTGACTTGAGCACAAGAAGGTCGAATGGTTTCTCTAGAAATATTGGAA ATGTAACCCAAGTATATTCCAGGGAGGGTTCAACCTTAACTACCACTCTTTCACAAAATTATGTACATACAAATGACCATAAAAGTCAATCAAGTGGTTTGTTAAGAAGTTTGTCGGGTAAAAAGAAGTGTCTCCCCACTAAAGTAAGTTTTATGGGTCCACCATTATGTTTGGACGCAACTTCGTCAGTATGCACTGTTACAACTTCTATTTTGTCTGGTCAAACTAACCAACCAGTTCCTTGTAGCAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CD190984             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      AAGGTCGAATGGTTTCTCTAGAAATATTGGAA ATGTAACCCAAGTATATTCCAAGGAGGGTTCAACCTTAACTACCACTCTTTCACAAAATTATGTACATACAAATGACCATAAAAGTCAATCAAGTGGTTTGTTAAGAAGTTTGTCGGGTAAAAAGAAGTGTCTCCCCACTAAAGTAAGTTTTATGGGTCCACCATTATGTTTGGACGCAACTTCATCAGTATGCACTGTTACAACTTCTATTTTGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CD181843             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              TATTGGAA ATGTAACCCAAGTATATTCCAAGGAGGGTTCAACCTTAACTACCACTCTTTCACAAAATTATGTACATACAAATGACCATAAAAGTCAATCGAGTGGTTTGTTAAGAAGTTTGTCGGGTAAAAAGAAGTGTCTCCCCACTAAAGTAAGTTTTATGGGTCCACCATCATGTTTGGACGCAACTTCATCAGTATGCACTGTTACAACTTCTATTTTGTCTGGTCAAACTAACCAACCAGTTCCTTGTAGCAGCAGTTTGTCAGCCACACCTACATCATCTGTACTGCAGAAGATTTCTTTCTCGACTACTCGCACTTGGTCGAAAGTTGTCGGTACAAAGTTTGCAAAAGTCCCACCTGAAAATCATGGTGACTCTACG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CD153182             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 GACCATAAAAGTCAATCAAGTGGTTTGTTAAGAAGTTTGTCGGGTAAAAAGAAGTGTCTCCCCACTAAAGTAAGTTTTATGGGTCCACCATTATGTTTGGACGCAACTTCATCAGTATGCACTGTTACAACTTTTATTTTGTCTGGTCAAACTAACCAACCAGTTCCTTGTAGCAGCAGTTTGTCAGCCACACCTACATCATCTGTACTGCAGAAGATTTCTTTCTCGACTACTCGCACTTGGTCGAAAGTTGTCGGTACAAAGTTTGCAAAAGTCCCACCTGAAAATCATGGTGACTCTACGAAAACCTCATCGTCAGTTTTACTTAATTCAAATTCAGTCTGGCAAACAGAACATTCAAACCACGTAATTACTGAGGAATCCAATGAAGATAAAAAATTATTAGACAACACAGCCACTACAACAACCAGTAACACAGATTCAGTGGTGAAATGCTCTTATGCTTCCATGCAATCGTTATGGTCGATAGGCGATAGCATACCTCAAGCANACAAAAATCATTCAACCAATAGTACTTTGCTCTTGGCTAGTAGCACAGTTCAGGGTACGGTTGTCCCTTCTGTTGGTCCGCTATGTACTGTTAGTCCTTCGACTACATTCTCAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL CD127834             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TGTCAGCCACACCTACATCATCTGTACTGCAGAAGATTTCTTTCTCGACTACTCGCACTTGGTCGAAAGTTGTCGGTACAAAGTTTGCAAAAGTCCCACCTGAAAATCATGGTGACTCTACGAAAACCTCATCGTCAGTTTTACTTAATTCAAATTCAGTCTGGCAAACAGAACATTCAAACCACGTAATTACTGAGGAATCCAATGAAGATAAAAAATTATTAGACAACACAGCCACTACAACAACCAGTAACACAGATTCAGTGGTGAAATGCTCTTATGCTTCCATGCAATCGTTATGGTCGATAGGCGATAGCATACCTCAAGCAAACAAAAATCATTCAACCAATAGTACTTTGCTCTTGGCTAGTAGCACAGTTCAGGGTACGGTTGTCCCTTCTGTTGGTCCGCTATGTACTGTTAGTCCTTCGACTACATTCTCATCTCAAATTTCTAATAACATTTGTAAGGTCAAGCCTCAACAACAACAGCTTC TTCAGAATAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL CD130047             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ATCTGTACTGCAGAAGATTTCTTTCTCGACTACTCGCACTTGGTCGAAAGTTGTCGGTACAAAGTTTGCAAAAGTCCCACCTGAAAATCATGGTGACTCTACGAAAACCTCATCGTCAGCTTTACTTAATTCAAATTCAGTCTGGCAAACAGAACATTCAAACCACGTAATTACTGAGGAATCCAATGAAGATAAAAAATTATTAGACAACACAGCCACTACAACAACCAGTAACACAGATTCAGTGGTGAAATGCTCTTATGCTTCCATGCAATCGTTATGGTCGATAGGCGATAGCATACCTCAAGCAAACAAAAATCATTCAACCAATAGTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CD094720             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         CAACCAGTAACACAGATTCAGTGGTGAAATGCTCTTATGCTTCCATGCAATCGTTATGGTCGATAGGCGATAGCATACCTCAAGCAAACAAAAATCATTCAACCAATAGTACTTTGCTCTTGGCTAGTAGCACAGTTCAGGGTACGGTTGCCCCTTCTGTTGGTCCGCTATGTACTGTTAGTCCTTCGACTACATTCTCATCTCAAATTTCTAATAACATTTGTAAGGTCAAGCCTCAACAACAACAGCTTT TTCAGGTTACTT CCATCTCACCTCTTATTTCAACTTCTATGCACTTAAACCTTCTTAGCCCGTCTAATAATAATATTATTGAGAATATCTCCACCGCAGATTTGATAGCAGAAACAGAAAGATCTGATTTCGAATGTTGTGGTGACATTGGACGTCCTAATGCCCTTTTAAGACCGCATACCTCAGATAACCTTCAAAATTTAACAACTTTATCCAGTAACGCTTTTCAGTCTTGGTCTTCCTCAAATGCTCTATATACACCATTCTCTNTATCAAATGTTCCTAT                                                                                                                                                                                                                     ]
[+] EMBL CD112613             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          AACCAGTAACACAGATTCAGTGGTGAAATGCTCTTATGCTTCCATGCAATCGTTATGGTCGATAGGCGATAGCATACCTCAAGCAAACAAAAATCATTCAACCAATAGTACTTTGCTCTTGGCTAGTAGCACAGTTCAGGGTACGGTTGTCCCTTCTGTTGGTCCGCTATGTACTGTTAGTCCTTCGACTACATTCTCATCTCAAATTTCTAATAACATTTGTAAGGTCAAGCCTCAACAACAACAGCTTC TTCAGGTTACTT CCATCTCACCTCTTATTTCGACTTCTATGCACTTAAACCTTCTTAGCCCGTCTAATAATAATATTATTGAGAATATCTCCACCGCAGATTTGATAGCAGAAACAGAAAGATCT                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CD166112             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            TATGCTTCCATGCAATCGTTATGGTCGATAGGCGATAGCATACCTCAAGCAAACAAAAATCATTCAACCAATAGTACTTTGCTCTTGGCTAGTAGCACAGTTCAGGGTACGGTTGTCCCTTCTGTTGGTCCGCTATGTACTGTTAGTCCTTCGACTACATTCTCATCTCAAATTTCTAATAACATTTGTAAGGTCAAGCCTCAACAACAACAGCTTCTTTCAGG TAC TCCCATCTCACC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[-] EMBL CD184811             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ATACCTCAAGCAAACAAAAATCATTCAACCAATAGTACTTGGCTCTGGGCTAGTAGCACAGTTCAGGGTACGGTTGTCCCTTCTGTTGGTCCGCTATGTACTGTTAGTCCTTCGACTACATTCTCATCTCAAATTTCTAATAACATTTGTAAGGTCAAGCCTCAACAACAACAGCTAC TTCAGGTTACTT CCATCTCACCTCTTATTTCAACTTCTATGCACTTAAACCTTCTTAGCCCGTCTAATAATAATATTATTGAGAATATCTCCACCGCAGATTTGATAGCAGAAACAGAAAGATCTGATTTCGAATGTTGTGGTGACATTGGACGTCCTAATGCCCTTTTAAGACCGCATACCTCAGATAACCTTCAAAATTTAACAACTTTATCCA                                                                                                                                                                                                                                                                                           ]
[-] EMBL CD124999             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        TCACCTCTTATTTCAACTTCTATGCACTTAAACCTTCTTAGCCCGTCTAATAATAATATTATTGAGAATATCTCCACCGCAGATTTGATAGCAGAAACAGAAAGATCTGATTTCGAATGTTGTGGTGACATTGGACGTCCTAATGCCCTTTTAAGACCGCATACCTCAGATAACCTTCAAAATTTAACAACTTTATCCAGTAACGCTTTTCAGTCTTGGTCTTCCTCAAATGCTCTATATACACCATTCTCTTTATCAAATGTTCCTATAAATCGTCACGAAAGCAACATGTTTTCCGGTAACGTTTGGCCTACAGCTGATCAAAGTATGGATATGAATATAAATTGCATGACAGGTTCGTATAATACTAATTCTAACCAACCACACTTTCAAAATCAATTGAGTTCTAATATTCTTTCAAGTGTTTTAACTCACAATAATACCACCCCATCATTGGATGGCATGACTAAGCAATCGAATAT]
[-] EMBL CD166095             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              TGCTCTATATACACCATTCTCTTTATCAAATGTTCCTATAAATCGTCACGAAAGCAACATGTTTTCCGGTAACGTNTGGCCTACAGCTGATCAAAGTATGGATATGAATATAAATTGCATGACAGGTTCGTATAATACTAATTCTAACCAACCACACTTTCAAAATCAATTGAGTTCTAATATTCTTTCAAGTGTTATAACTCACAAT                                            ]




>consensus_10665#0
ATTGGCACACGATCGATCCTTATGAAAGCCAGTTTGTTGATCTTGAAGTTGAGCGTCTAC
TGAATCTTTCATTCGGTTCAGAAGCGCTGTTGAAAACTTCGCCTAGAACTGAAAGTAATT
TGATCCCTTTTTAATTCCCTCTTCCTTGTGGTATCTTGATGAGTTATCGCTCTTTTCGCG
TTGCTTGTACTTGTTATTCCTCCTAAGTTTCCCTGGAGCATTTTTGCAGTTGCCTACTTA
TCAGAATTTAATGGTTCGACCACTATGTTGTCTGGTCCTCCTGTTTTACCGTTCCAATTT
GTCTATTAAGCCTCATGCCTCATTTCCTGAAAATTCTTATGCTGTGGATTCATTGTCTAC
ATGGGCTAATCGCACAGAGCGAAAAAGTGAAACAGTTTCCAAGGATGATTCTGATAAGTT
CTCGCAATCACGTAAAGAGTTCTACGAGGTAAATCAAGACACCTTTGAAGAGGATACTCC
ACATGGAGATGGATTTACAAAAGTTGTCTCAAAAGCTAGCAAGTATTTTGCCCGTCGACG
AATGCAGCAAGAAGTTTCAGTTTCTGGTGACTTGAGCACAAGAAGGTCGAATGGTTTCTC
TAGAAATATTGGAAATGTAACCCAAGTATATTCCAAGGAGGGTTCAACCTTAACTACCAC
TCTTTCACAAAATTATGTACATACAAATGACCATAAAAGTCAATCAAGTGGTTTGTTAAG
AAGTTTGTCGGGTAAAAAGAAGTGTCTCCCCACTAAAGTAAGTTTTATGGGTCCACCATT
ATGTTTGGACGCAACTTCATCAGTATGCACTGTTACAACTTCTATTTTGTCTGGTCAAAC
TAACCAACCAGTTCCTTGTAGCAGCAGTTTGTCAGCCACACCTACATCATCTGTACTGCA
GAAGATTTCTTTCTCGACTACTCGCACTTGGTCGAAAGTTGTCGGTACAAAGTTTGCAAA
AGTCCCACCTGAAAATCATGGTGACTCTACGAAAACCTCATCGTCAGTTTTACTTAATTC
AAATTCAGTCTGGCAAACAGAACATTCAAACCACGTAATTACTGAGGAATCCAATGAAGA
TAAAAAATTATTAGACAACACAGCCACTACAACAACCAGTAACACAGATTCAGTGGTGAA
ATGCTCTTATGCTTCCATGCAATCGTTATGGTCGATAGGCGATAGCATACCTCAAGCAAA
CAAAAATCATTCAACCAATAGTACTTTGCTCTTGGCTAGTAGCACAGTTCAGGGTACGGT
TGTCCCTTCTGTTGGTCCGCTATGTACTGTTAGTCCTTCGACTACATTCTCATCTCAAAT
TTCTAATAACATTTGTAAGGTCAAGCCTCAACAACAACAGCTTCTTCAGGTTACTCCATC
TCACCTCTTATTTCAACTTCTATGCACTTAAACCTTCTTAGCCCGTCTAATAATAATATT
ATTGAGAATATCTCCACCGCAGATTTGATAGCAGAAACAGAAAGATCTGATTTCGAATGT
TGTGGTGACATTGGACGTCCTAATGCCCTTTTAAGACCGCATACCTCAGATAACCTTCAA
AATTTAACAACTTTATCCAGTAACGCTTTTCAGTCTTGGTCTTCCTCAAATGCTCTATAT
ACACCATTCTCTTTATCAAATGTTCCTATAAATCGTCACGAAAGCAACATGTTTTCCGGT
AACGTTTGGCCTACAGCTGATCAAAGTATGGATATGAATATAAATTGCATGACAGGTTCG
TATAATACTAATTCTAACCAACCACACTTTCAAAATCAATTGAGTTCTAATATTCTTTCA
AGTGTTTTAACTCACAATAATACCACCCCATCATTGGATGGCATGACTAAGCAATCGAAT
AT

consensusID : consensus_10665#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 236
fasta sequence

                              [TTCGAATAATAGAGAACGAGGGATGATATTTAAGTTGGGTTTATTCACAACTACTCTACACACATATCAGGTCGGGTATTTAACTACAATGACGTTAACGTTTTGTTCCAATCTCGAGGACATGGCTCAAAATTGTTTGCAATGGCGAAGGTGCATCCACTCTTTGTGTTCTACCAAATTCTAATCTTCTGAATTCTTCATGTCCCTATCTTTCTTCTCTTTCCAAATTTATTTCA]

[+] EMBL CD193321             [TTCGAATAATAGAGAACGAGGGATGATATTTAAGTTGGGTTTATTCACAACTACTCTACACACATATCAGGTCGGGTATTTAACTACAATGACGTTAACGTTTTGTTCCAATCTCGAGGACATGGCTCAAAATTGTTTGCAATGGCGAAGGTGCATCCACTCTTTGTGTTCTACCAAATTCTAATCTTCTGAATTCTTCATGTCCCTATCTTTCTTCTCTTTCCAAATTTATTTCA]




>consensus_10665#1
TTCGAATAATAGAGAACGAGGGATGATATTTAAGTTGGGTTTATTCACAACTACTCTACA
CACATATCAGGTCGGGTATTTAACTACAATGACGTTAACGTTTTGTTCCAATCTCGAGGA
CATGGCTCAAAATTGTTTGCAATGGCGAAGGTGCATCCACTCTTTGTGTTCTACCAAATT
CTAATCTTCTGAATTCTTCATGTCCCTATCTTTCTTCTCTTTCCAAATTTATTTCA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10665#0      ATTGGCACACGATCGATCCTTATGAAAGCCAGTTTGTTGATCTTGAAGTTGAGCGTCTAC 60
consensus_10665#1      ------------------------------------------------------------
                                                                                   

consensus_10665#0      TGAATCTTTCATTCGGTTCAGAAGCGCTGTTGAAAACTTCGCCTAGAACTGAAAGTAATT 120
consensus_10665#1      ------------------------------------------------------------
                                                                                   

consensus_10665#0      TGATCCCTTTTTAATTCCCTCTTCCTTGTGGTATCTTGATGAGTTATCGCTCTTTTCGCG 180
consensus_10665#1      ------------------------------------------------------------
                                                                                   

consensus_10665#0      TTGCTTGTACTTGTTATTCCTCCTAAGTTTCCCTGGAGCATTTTTGCAGTTGCCTACTTA 240
consensus_10665#1      ------------------------------------------------------------
                                                                                   

consensus_10665#0      TCAGAATTTAATGGTTCGACCACTATGTTGTCTGGTCCTCCTGTTTTACCGTTCCAATTT 300
consensus_10665#1      ------------------------------------------------------------
                                                                                   

consensus_10665#0      GTCTATTAAGCCTCATGCCTCATTTCCTGAAAATTCTTATGCTGTGGATTCATTGTCTAC 360
consensus_10665#1      ------------------------------------------------------------
                                                                                   

consensus_10665#0      ATGGGCTAATCGCACAGAGCGAAAAAGTGAAACAGTTTCCAAGGATGATTCTGATAAGTT 420
consensus_10665#1      ------------------------------------------------------------
                                                                                   

consensus_10665#0      CTCGCAATCACGTAAAGAGTTCTACGAGGTAAATCAAGACACCTTTGAAGAGGATACTCC 480
consensus_10665#1      ------------------------------------------------------------
                                                                                   

consensus_10665#0      ACATGGAGATGGATTTACAAAAGTTGTCTCAAAAGCTAGCAAGTATTTTGCCCGTCGACG 540
consensus_10665#1      ------------------------------------------------------------
                                                                                   

consensus_10665#0      AATGCAGCAAGAAGTTTCAGTTTCTGGTGACTTGAGCACAAGAAGGTCGAATGGTTTCTC 600
consensus_10665#1      ------------------------------------------------------------
                                                                                   

consensus_10665#0      TAGAAATATTGGAAATGTAACCCAAGTATATTCCAAGGAGGGTTCAACCTTAACTACCAC 660
consensus_10665#1      ------------------------------------------------------------
                                                                                   

consensus_10665#0      TCTTTCACAAAATTATGTACATACAAATGACCATAAAAGTCAATCAAGTGGTTTGTTAAG 720
consensus_10665#1      ------------------------------------------------------------
                                                                                   

consensus_10665#0      AAGTTTGTCGGGTAAAAAGAAGTGTCTCCCCACTAAAGTAAGTTTTATGGGTCCACCATT 780
consensus_10665#1      ------------------------------------------------------------
                                                                                   

consensus_10665#0      ATGTTTGGACGCAACTTCATCAGTATGCACTGTTACAACTTCTATTTTGTCTGGTCAAAC 840
consensus_10665#1      ------------------------------------------------------------
                                                                                   

consensus_10665#0      TAACCAACCAGTTCCTTGTAGCAGCAGTTTGTCAGCCACACCTACATCATCTGTACTGCA 900
consensus_10665#1      ------------------------------------------------------------
                                                                                   

consensus_10665#0      GAAGATTTCTTTCTCGACTACTCGCACTTGGTCGAAAGTTGTCGGTACAAAGTTTGCAAA 960
consensus_10665#1      ------------------------------------------------------------
                                                                                   

consensus_10665#0      AGTCCCACCTGAAAATCATGGTGACTCTACGAAAACCTCATCGTCAGTTTTACTTAATTC 1020
consensus_10665#1      ------------------------------------------------------------
                                                                                   

consensus_10665#0      AAATTCAGTCTGGCAAACAGAACATTCAAACCACGTAATTACTGAGGAATCCAATGAAGA 1080
consensus_10665#1      ------------------------------------------------------------
                                                                                   

consensus_10665#0      TAAAAAATTATTAGACAACACAGCCACTACAACAACCAGTAACACAGATTCAGTGGTGAA 1140
consensus_10665#1      ------------------------------------------------------------
                                                                                   

consensus_10665#0      ATGCTCTTATGCTTCCATGCAATCGTTATGGTCGATAGGCGATAGCATACCTCAAGCAAA 1200
consensus_10665#1      ------------------------------------------------------------
                                                                                   

consensus_10665#0      CAAAAATCATTCAACCAATAGTACTTTGCTCTTGGCTAGTAGCACAGTTCAGGGTACGGT 1260
consensus_10665#1      ------------------------------------------------------------
                                                                                   

consensus_10665#0      TGTCCCTTCTGTTGGTCCGCTATGTACTGTTAGTCCTTCGACTACATTCTCATCTCAAAT 1320
consensus_10665#1      ------------------------------------------------------------
                                                                                   

consensus_10665#0      TTCTAATAACATTTGTAAGGTCAAGCCTCAACAACAACAGCTTCTTCAGGTTACTCCATC 1380
consensus_10665#1      ------------------------------------------------------------
                                                                                   

consensus_10665#0      TCACCTCTTATTTCAACTTCTATGCACTTAAACCTTCTTAGCCCGTCTAATAATAATATT 1440
consensus_10665#1      ------------------------------------------------------------
                                                                                   

consensus_10665#0      ATTGAGAATATCTCCACCGCAGATTTGATAGCAGAAACAGAAAGATCTGATTTCGAATGT 1500
consensus_10665#1      ------------------------------------------------------------
                                                                                   

consensus_10665#0      TGTGGTGACATTGGACGTCCTAATGCCCTTTTAAGACCGCATACCTCAGATAACCTTCAA 1560
consensus_10665#1      -------------------------------------------------------TTCGA 5
                                                                              *** *

consensus_10665#0      AATTTAACAACTTTATCCAGTAACGCTTTTCAGTCTTGGTCT-TCCTCAAATGCTCTATA 1619
consensus_10665#1      A---TAATAGA--GAACGAGGGATGATATTTAAGTTGGGTTTATTCACAACTACTCTACA 60
                       *   *** *     * * **  * * * ** *   * *** * * * *** * ***** *

consensus_10665#0      TACACCATTCTCTTTATCAAATGTTCCTATAAATCGTCACGAAAGCAACATGTTTTCCGG 1679
consensus_10665#1      CACA----------TATCAGGTCGGGTATTTAACTACAATGACGTTAACGTTTTGTTC-- 108
                        ***          *****  *       * **     * **    *** * ** * *  

consensus_10665#0      TAACGTTTGGCCTACAGCTGATCAAAGTATGGATATGAATATAAATTGCATGACAGGTTC 1739
consensus_10665#1      CAATCTCGAGGACATGGCTCAAAATTGTTTGCA-ATGGCGA--AGGTGCATCCACTCTTT 165
                        **  *   *   *  *** *  *  ** ** * ***   *  *  *****      ** 

consensus_10665#0      GTATAATACTAA-TTCTAACCAACCACACTTTCAAAATCAATTGAGTTCTAATATTCTTT 1798
consensus_10665#1      GTGTTCTACCAAATTCTAATCTTCTGAATTCTTCATGTCCCTATCTTTCT--TCTCTTTC 223
                       ** *  *** ** ****** *  *   * * *  *  **  *    ****  * *  ** 

consensus_10665#0      CAAGTGTTTTAACTCACAATAATACCACCCCATCATTGGATGGCATGACTAAGCAATCGA 1858
consensus_10665#1      CAAAT---TTATTTCA-------------------------------------------- 236
                       *** *   ***  ***                                            

consensus_10665#0      ATAT 1862
consensus_10665#1      ----