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These datas are free for academic use only, please contact me for any other use. Takifugu rubripes see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1033#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1513 fasta sequence
[ATACCAGAGGAAGCTCTACAAGGAACTGCTGGCTAACTACAACCGGCTGGAGAGGCCCGTTTTCAACGACTCAGCCCCCATCCTGGTGGAGCTGGGCCTCACCCTGCTGCAGATCATCGACGTGGATGAGAAGAACCAAGTGTTGATGACCAATGCATGGCTGCAGTTGTATTGGACAGACATCTACCTAACCTGGAATCCAGAAAGCTACCCTGGTGTCCAGAACCTCCGATTCCCTTCAGACCAGGTCTGGACCCCTGACATCCTGCTCTACAACAGTGCCGACGAGCGGTTTGACGCCACGTTCCACACTAACGTTCTGGTGAACGCGTCAGGCTACTGTCAGTACATCCCGCCAGGCATCCTGAAGAGCACCTGCTACATCGATGTGCGTTGGTTCCCGTTTGATGTCCAAAAATGTGACTTAAAATTCGGCTCCTGGACGCACAACGGCTGGCTGCTGGACCTCCAGATGCTGGACGTGGACACGTCTACATACATACCCAACGGGGAGTGGGACCTCGTGGGGGTGCCGGCCAAGCGTAACGAGCTCTACTACGACTGCTGTAAGGAGCCGTACCCCGATGTGACCTTCACAGTCACCATGCGCCGCAGGACGTTGTATTATGGCCTCAACCTGCTCATCCCCTGTGTGCTGATCTCTGGCTTGGCCCTGCTGGTCTTCTTGCTGCCCGCAGACTCTGGAGAGAAGATTTCTCTGGGCATCACTGTGCTGCTTTCGCTCACTGTCTTCATGCTTCTGGTAGCAGAGATCATGCCCGCCACGTCCGACTCTGTTCCACTCATCGCGCAGTACTTTGCCAGCACCATGATGATTGTGGGAATGTCTGTGGTGGTGACAGTGATCGTCCTGCAGTTTCACCATCACGACCCTCACGGAGGGAAGATGCCTAAATGGGTTCGTGTGATTTTGTTGAACTGGTGTGCCTGGTTCCTCCGAATGAAGCAACCCGGTGACGAGCGTAAGCGGCCGGGTTATAAAGCTCGCCACCTCTCCCAGCGTCACTCCAGCTCCAGCTCCATAGAGATGAGCGCCATGCCCAGCCTCAGCGTGCCCCTCGCTCAGACCTCTGGCCCATCGTGCCCAACAGGAACCTCCAACGGCTCCATGGGTTTTTACTTTAGCACCTACCACCCGACAGACAGCTCATCCTGTCCCCCTTCCAGTGACTCTGGGGTGGCACTTGGAGGACGCAACCACAGCTCCCCCAGCGAGGAGGCGGAGCCACCTGTCGGAGGCAGCGGCGGAAGCCTGGGAATGGGAGTGGGAAGGGTCAGCATCCCCCCACCAGAGATCATGTGCATCCTTGAGGAGGTGTCCTACATAGCCCAGAGGTTCCGGGACCAAGACGAGGCCGAGGCCATCTGCAGCGAGTGGAAGTTTGCGGCGGCGGTGGTGGACCGCCTCTGTCTGGTGGCCTTCTCCCTCTTCTCCATCATCTGCACCTTCACCATCCTCATGTCTGCGCCCAACTTCATAGAGGCCGTTTCA]
[+] EMBL AY299466 [ATACCAGAGGAAGCTCTACAAGGAACTGCTGGCTAACTACAACCGGCTGGAGAGGCCCGTTTTCAACGACTCAGCCCCCATCCTGGTGGAGCTGGGCCTCACCCTGCTGCAGATCATCGACGTGGATGAGAAGAACCAAGTGTTGATGACCAATGCATGGCTGCAGTTGTATTGGACAGACATCTACCTAACCTGGAATCCAGAAAGCTACCCTGGTGTCCAGAACCTCCGATTCCCTTCAGACCAGGTCTGGACCCCTGACATCCTGCTCTACAACAGTGCCGACGAGCGGTTTGACGCCACGTTCCACACTAACGTTCTGGTGAACGCGTCAGGCTACTGTCAGTACATCCCGCCAGGCATCCTGAAGAGCACCTGCTACATCGATGTGCGTTGGTTCCCGTTTGATGTCCAAAAATGTGACTTAAAATTCGGCTCCTGGACGCACAACGGCTGGCTGCTGGACCTCCAGATGCTGGACGTGGACACGTCTACATACATACCCAACGGGGAGTGGGACCTCGTGGGGGTGCCGGCCAAGCGTAACGAGCTCTACTACGACTGCTGTAAGGAGCCGTACCCCGATGTGACCTTCACAGTCACCATGCGCCGCAGGACGTTGTATTATGGCCTCAACCTGCTCATCCCCTGTGTGCTGATCTCTGGCTTGGCCCTGCTGGTCTTCTTGCTGCCCGCAGACTCTGGAGAGAAGATTTCTCTGGGCATCACTGTGCTGCTTTCGCTCACTGTCTTCATGCTTCTGGTAGCAGAGATCATGCCCGCCACGTCCGACTCTGTTCCACTCATCGCGCAGTACTTTGCCAGCACCATGATGATTGTGGGAATGTCTGTGGTGGTGACAGTGATCGTCCTGCAGTTTCACCATCACGACCCTCACGGAGGGAAGATGCCTAAATGGGTTCGTGTGATTTTGTTGAACTGGTGTGCCTGGTTCCTCCGAATGAAGCAACCCGGTGACGAGCGTAAGCGGCCGGGTTATAAAGCTCGCCACCTCTCCCAGCGTCACTCCAGCTCCAGCTCCATAGAGATGAGCGCCATGCCCAGCCTCAGCGTGCCCCTCGCTCAGACCTCTGGCCCATCGTGCCCAACAGGAACCTCCAACGGCTCCATGGGTTTTTACTTTAGCACCTACCACCCGACAGACAGCTCATCCTGTCCCCCTTCCAGTGACTCTGGGGTGGCACTTGGAGGACGCAACCACAGCTCCCCCAGCGAGGAGGCGGAGCCACCTGTCGGAGGCAGCGGCGGAAGCCTGGGAATGGGAGTGGGAAGGGTCAGCATCCCCCCACCAGAGATCATGTGCATCCTTGAGGAGGTGTCCTACATAGCCCAGAGGTTCCGGGACCAAGACGAGGCCGAGGCCATCTGCAGCGAGTGGAAGTTTGCGGCGGCGGTGGTGGACCGCCTCTGTCTGGTGGCCTTCTCCCTCTTCTCCATCATCTGCACCTTCACCATCCTCATGTCTGCGCCCAACTTCATAGAGGCCGTTTCA]
consensusID : consensus_1033#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1432 fasta sequence
[GTTCCAGAGGAAGCTGTACCACGACCTGATGGTCAATTACAACCGTCTTGAAAGACCCGTCCTCAACGACTCCGCGCCAATCGTGGTGGAACTCGGCTTCACGCTGCGACAAATCATCGATGTGGATGAGAAGAACCAAGTGCTGATCACGAATGCCTGGCTGCAGCTGTACTGGACAGACATTTATCTGTCATGGAATCCAGAGAGCTTCCCCGGTGTTCAGAACCTGCGCTTCCCGTCCAGTCTCATATGGATGCCTGATATCCTCCTCTACAACAGTGCCGATGAGAGGTTTGACGCCACCTTCCACACCAACGTGCTGGTGAACGCTACCGGAGTCTGCCAGTACATCCCACCAGGCATCCTGAAGAGCACCTGTTATATTGACGTGCGCTGGTTTCCATTCGATGTGCAGAGGTGCGATCTGAAGTTTGGCTCCTGGACTCACAACGGCTGGCTGCTGGACCTACAAATGATGGACGTGGACATCTCTACCTACATACCCAACGGGGAGTGGGACCTTGTAGGTGTGCCAGCGAAGCGGAATGAGCTGTACTACGACTGCTGTAAAGAACCCTACCCCGATGTGACGTTCACTGTCACCATACGCCGCAGGACGCTTTATTATGGCCTCAACCTGCTCGTTCCCTGTGTGCTCATATCTGGTCTGGCGCTGCTGGTCTTCCTGCTTCCTGCTGACTCTGGGGAGAAGATTTCACTGGGCATCACCGTGCTGCTGTCACTAACAGTCTTCATGTTGCTGGTAGCAGAGATCATGCCTGCCACTTCAGACTCAGTTCCTCTAATTGCTCAGTACTTCGCTAGCACCATGATGATCGTTGGCCTGTCTGTGGTCGTCACGGTCCTTGTGCTTCAGTTCCACCACCACGATCCACATGGCGGGAAGATGCCTAAATGGGTTCGGGTTGTTCTACTCAACTGGTGCGCTTGGTTCCTCCGCATGAAGAAGCCGGGCGAGGATAAACAAGCTGTGGCTTCCAGTCGGCCTCCTGACCACAAACGCTCTCACCCCCCTCCCCACGCCAGTGCCAGCACCATCCAGGTGGCCACTATCCCGGGACAGGCTCCAGCCCCGACAGCCAATGGGAACATGAACCTGTACTTCAGCTACCACGCGCTGGCCTTGGATAACCCCACCCTCCCACCGGCCTCTGACCCAAGCGTCATCCGCTCGGAACAGACACGTTCGCTGCTGCTGGAGCAGCTCCCGGAAATTTCCCAGATCCTCGAGGAAGTGCAATACATAGCCAGGCGCTTCCGGGAGCAGGACGAGGGCGAGGCCATCTGCAGCGAGTGGAAGTTTGCGGCGGCGGTGGTGGATCGGCTGTGCCTGGTGGCCTTCTCCCTTTTCTCCATCATCTGCACCTTCACCATCCTCATGTCCGCTCCCAACTTTATCGAAGCCGTGTTC]
[+] EMBL AY299465 [GTTCCAGAGGAAGCTGTACCACGACCTGATGGTCAATTACAACCGTCTTGAAAGACCCGTCCTCAACGACTCCGCGCCAATCGTGGTGGAACTCGGCTTCACGCTGCGACAAATCATCGATGTGGATGAGAAGAACCAAGTGCTGATCACGAATGCCTGGCTGCAGCTGTACTGGACAGACATTTATCTGTCATGGAATCCAGAGAGCTTCCCCGGTGTTCAGAACCTGCGCTTCCCGTCCAGTCTCATATGGATGCCTGATATCCTCCTCTACAACAGTGCCGATGAGAGGTTTGACGCCACCTTCCACACCAACGTGCTGGTGAACGCTACCGGAGTCTGCCAGTACATCCCACCAGGCATCCTGAAGAGCACCTGTTATATTGACGTGCGCTGGTTTCCATTCGATGTGCAGAGGTGCGATCTGAAGTTTGGCTCCTGGACTCACAACGGCTGGCTGCTGGACCTACAAATGATGGACGTGGACATCTCTACCTACATACCCAACGGGGAGTGGGACCTTGTAGGTGTGCCAGCGAAGCGGAATGAGCTGTACTACGACTGCTGTAAAGAACCCTACCCCGATGTGACGTTCACTGTCACCATACGCCGCAGGACGCTTTATTATGGCCTCAACCTGCTCGTTCCCTGTGTGCTCATATCTGGTCTGGCGCTGCTGGTCTTCCTGCTTCCTGCTGACTCTGGGGAGAAGATTTCACTGGGCATCACCGTGCTGCTGTCACTAACAGTCTTCATGTTGCTGGTAGCAGAGATCATGCCTGCCACTTCAGACTCAGTTCCTCTAATTGCTCAGTACTTCGCTAGCACCATGATGATCGTTGGCCTGTCTGTGGTCGTCACGGTCCTTGTGCTTCAGTTCCACCACCACGATCCACATGGCGGGAAGATGCCTAAATGGGTTCGGGTTGTTCTACTCAACTGGTGCGCTTGGTTCCTCCGCATGAAGAAGCCGGGCGAGGATAAACAAGCTGTGGCTTCCAGTCGGCCTCCTGACCACAAACGCTCTCACCCCCCTCCCCACGCCAGTGCCAGCACCATCCAGGTGGCCACTATCCCGGGACAGGCTCCAGCCCCGACAGCCAATGGGAACATGAACCTGTACTTCAGCTACCACGCGCTGGCCTTGGATAACCCCACCCTCCCACCGGCCTCTGACCCAAGCGTCATCCGCTCGGAACAGACACGTTCGCTGCTGCTGGAGCAGCTCCCGGAAATTTCCCAGATCCTCGAGGAAGTGCAATACATAGCCAGGCGCTTCCGGGAGCAGGACGAGGGCGAGGCCATCTGCAGCGAGTGGAAGTTTGCGGCGGCGGTGGTGGATCGGCTGTGCCTGGTGGCCTTCTCCCTTTTCTCCATCATCTGCACCTTCACCATCCTCATGTCCGCTCCCAACTTTATCGAAGCCGTGTTC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_1033#0 ATACCAGAGGAAGCTCTACAAGGAACTGCTGGCTAACTACAACCGGCTGGAGAGGCCCGT 60
consensus_1033#1 GTTCCAGAGGAAGCTGTACCACGACCTGATGGTCAATTACAACCGTCTTGAAAGACCCGT 60
* ************ *** * ** *** *** ** ******** ** ** ** *****
consensus_1033#0 TTTCAACGACTCAGCCCCCATCCTGGTGGAGCTGGGCCTCACCCTGCTGCAGATCATCGA 120
consensus_1033#1 CCTCAACGACTCCGCGCCAATCGTGGTGGAACTCGGCTTCACGCTGCGACAAATCATCGA 120
********** ** ** *** ******* ** *** **** **** ** ********
consensus_1033#0 CGTGGATGAGAAGAACCAAGTGTTGATGACCAATGCATGGCTGCAGTTGTATTGGACAGA 180
consensus_1033#1 TGTGGATGAGAAGAACCAAGTGCTGATCACGAATGCCTGGCTGCAGCTGTACTGGACAGA 180
********************* **** ** ***** ********* **** ********
consensus_1033#0 CATCTACCTAACCTGGAATCCAGAAAGCTACCCTGGTGTCCAGAACCTCCGATTCCCTTC 240
consensus_1033#1 CATTTATCTGTCATGGAATCCAGAGAGCTTCCCCGGTGTTCAGAACCTGCGCTTCCCGTC 240
*** ** ** * *********** **** *** ***** ******** ** ***** **
consensus_1033#0 AGACCAGGTCTGGACCCCTGACATCCTGCTCTACAACAGTGCCGACGAGCGGTTTGACGC 300
consensus_1033#1 CAGTCTCATATGGATGCCTGATATCCTCCTCTACAACAGTGCCGATGAGAGGTTTGACGC 300
* * **** ***** ***** ***************** *** **********
consensus_1033#0 CACGTTCCACACTAACGTTCTGGTGAACGCGTCAGGCTACTGTCAGTACATCCCGCCAGG 360
consensus_1033#1 CACCTTCCACACCAACGTGCTGGTGAACGCTACCGGAGTCTGCCAGTACATCCCACCAGG 360
*** ******** ***** *********** * ** *** *********** *****
consensus_1033#0 CATCCTGAAGAGCACCTGCTACATCGATGTGCGTTGGTTCCCGTTTGATGTCCAAAAATG 420
consensus_1033#1 CATCCTGAAGAGCACCTGTTATATTGACGTGCGCTGGTTTCCATTCGATGTGCAGAGGTG 420
****************** ** ** ** ***** ***** ** ** ***** ** * **
consensus_1033#0 TGACTTAAAATTCGGCTCCTGGACGCACAACGGCTGGCTGCTGGACCTCCAGATGCTGGA 480
consensus_1033#1 CGATCTGAAGTTTGGCTCCTGGACTCACAACGGCTGGCTGCTGGACCTACAAATGATGGA 480
** * ** ** *********** *********************** ** *** ****
consensus_1033#0 CGTGGACACGTCTACATACATACCCAACGGGGAGTGGGACCTCGTGGGGGTGCCGGCCAA 540
consensus_1033#1 CGTGGACATCTCTACCTACATACCCAACGGGGAGTGGGACCTTGTAGGTGTGCCAGCGAA 540
******** ***** ************************** ** ** ***** ** **
consensus_1033#0 GCGTAACGAGCTCTACTACGACTGCTGTAAGGAGCCGTACCCCGATGTGACCTTCACAGT 600
consensus_1033#1 GCGGAATGAGCTGTACTACGACTGCTGTAAAGAACCCTACCCCGATGTGACGTTCACTGT 600
*** ** ***** ***************** ** ** ************** ***** **
consensus_1033#0 CACCATGCGCCGCAGGACGTTGTATTATGGCCTCAACCTGCTCATCCCCTGTGTGCTGAT 660
consensus_1033#1 CACCATACGCCGCAGGACGCTTTATTATGGCCTCAACCTGCTCGTTCCCTGTGTGCTCAT 660
****** ************ * ********************* * *********** **
consensus_1033#0 CTCTGGCTTGGCCCTGCTGGTCTTCTTGCTGCCCGCAGACTCTGGAGAGAAGATTTCTCT 720
consensus_1033#1 ATCTGGTCTGGCGCTGCTGGTCTTCCTGCTTCCTGCTGACTCTGGGGAGAAGATTTCACT 720
***** **** ************ **** ** ** ******** *********** **
consensus_1033#0 GGGCATCACTGTGCTGCTTTCGCTCACTGTCTTCATGCTTCTGGTAGCAGAGATCATGCC 780
consensus_1033#1 GGGCATCACCGTGCTGCTGTCACTAACAGTCTTCATGTTGCTGGTAGCAGAGATCATGCC 780
********* ******** ** ** ** ********* * ********************
consensus_1033#0 CGCCACGTCCGACTCTGTTCCACTCATCGCGCAGTACTTTGCCAGCACCATGATGATTGT 840
consensus_1033#1 TGCCACTTCAGACTCAGTTCCTCTAATTGCTCAGTACTTCGCTAGCACCATGATGATCGT 840
***** ** ***** ***** ** ** ** ******** ** ************** **
consensus_1033#0 GGGAATGTCTGTGGTGGTGACAGTGATCGTCCTGCAGTTTCACCATCACGACCCTCACGG 900
consensus_1033#1 TGGCCTGTCTGTGGTCGTCACGGTCCTTGTGCTTCAGTTCCACCACCACGATCCACATGG 900
** ********** ** ** ** * ** ** ***** ***** ***** ** ** **
consensus_1033#0 AGGGAAGATGCCTAAATGGGTTCGTGTGATTTTGTTGAACTGGTGTGCCTGGTTCCTCCG 960
consensus_1033#1 CGGGAAGATGCCTAAATGGGTTCGGGTTGTTCTACTCAACTGGTGCGCTTGGTTCCTCCG 960
*********************** ** ** * * ******** ** ***********
consensus_1033#0 AATGAAGCAACCCGGTGACGAGCGTAAGCG-GCCGGGTTATAAAGCTCGCCACCTCTCCC 1019
consensus_1033#1 CATGAAGAAGCCGGG---CGAGGATAAACAAGCTGTGGCTTCCAGTCGGCCTCCTGACCA 1017
****** * ** ** **** *** * ** * * * ** *** *** **
consensus_1033#0 AGCGTCACTCCAGCTCCAGCTCCATAGAGATGAGCGCCATGCCCAGCCTCAGCGTGCCCC 1079
consensus_1033#1 CAAACGCTCTCACCCCCCTCCCCACG----CCAGTGCCAGCACCATC--CAGGTGGCCAC 1071
** * ** * *** ** **** *** * *** *** *
consensus_1033#0 TCGCTCAGACCTCTGGCCCATCGTGCCCAACAGGAACCTCCAACGGCTCCATGGGTTTTT 1139
consensus_1033#1 TATCCCGGGAC--AGGCTC--CAGCCCCGACAG------CCAATGGGAACATGAACCTGT 1121
* * * * * *** * * *** **** **** ** **** * *
consensus_1033#0 ACTTTAGCACCTACCACCCGACAGAC--AGCTCATCCTGTCCCCCTTCCAGTGACTCTGG 1197
consensus_1033#1 ACTTCAGC---TACCACGCGCTGGCCTTGGATAACCCCACCCTCCCACCGGC--CTCTGA 1176
**** *** ****** ** * * * * * ** ** ** ** * *****
consensus_1033#0 GGTGGCACTTGGAGGACGCAACCACAGCTCCCCCAGCGAGGAGGCGGAGCCACCTGTCGG 1257
consensus_1033#1 ------------------------------CCCAAGCG-----------TCATCCGCTCG 1195
*** **** ** * * *
consensus_1033#0 AGGCAGCGGCGGAAGCCTGGGAATGGGAGTGGGAAGGGTCAGCATCCCCCCACCAGAGAT 1317
consensus_1033#1 GAACAGACACGTTCGC-TGCTGCTGG--------------AGCAGCTCCC----GGAAAT 1236
*** ** ** ** *** **** * *** ** **
consensus_1033#0 CATGTGCATCCTTGAGGAGGTGTCCTACATAGCCCAGAGGTTCCGGGACCAAGACGAGGC 1377
consensus_1033#1 TTCCCAGATCCTCGAGGAAGTGCAATACATAGCCAGGCGCTTCCGGGAGCAGGACGAGGG 1296
***** ***** *** ********* * * ******** ** *******
consensus_1033#0 CGAGGCCATCTGCAGCGAGTGGAAGTTTGCGGCGGCGGTGGTGGACCGCCTCTGTCTGGT 1437
consensus_1033#1 CGAGGCCATCTGCAGCGAGTGGAAGTTTGCGGCGGCGGTGGTGGATCGGCTGTGCCTGGT 1356
********************************************* ** ** ** *****
consensus_1033#0 GGCCTTCTCCCTCTTCTCCATCATCTGCACCTTCACCATCCTCATGTCTGCGCCCAACTT 1497
consensus_1033#1 GGCCTTCTCCCTTTTCTCCATCATCTGCACCTTCACCATCCTCATGTCCGCTCCCAACTT 1416
************ *********************************** ** ********
consensus_1033#0 CATAGAGGCCGTTTCA 1513
consensus_1033#1 TATCGAAGCCGTGTTC 1432
** ** ***** *
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| Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |