Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Takifugu rubripes
cluster # 187 cluster # 187       Sequences # 2       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_187#0 length = 487 sequences # 2  
consensusID : consensus_187#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 487
fasta sequence 
                              [AAAAAAATTGGTCCCGGGCCCCCCCCCGGGGGTTTTTTTTTTTTTCTTTTTTTTTTTCACAGGGGCTGGGATTTTAATTTGGACCAGTTCTTTAACGGAAATGTAACAAAAAAAAAAAAAAAAAGTTTAAGAACACACTTAAATGCTCCAATTACATAAAAAGAGTATCTGAACAACACACTGAAACAACCGATGTGGGCTAAAACGTTGGTTATTCGCTAATGAGATAATTAAAGTTTGGTGAACATCCCCTTCTCCAGTTTGATTCCTGTGGGACAGATGGAGTGAAATTGGAGCAGGAGGAAACCATTGATGCAGTGGACGAGGTCCCAGTTTTACCCTCCATGTGTCAGCCCACTCTAATTAACCAGGCCCAAAGCATCCATTTTTAATGAGTGCTGGGGATGGTGACAGAAAACAGAAGGAGAAGGCCTGCTTTGCTCTTTTCATCCATTCAAAAACCCCCAAAATAGGACAACAATGAAGG]

[-] EMBL FR0056425            [AAAAAAATTGGTCCCGGGCCCCCCCCCGGGGGTTTTTTTTTTTTTCTTTTTTTTTTTTCCCGGGCTTGGGATTTTAATTTGGACCAGTTCTTTAACGTAAATTTACCCAAAAAAAAAAAAAAAAGTTTAAGAACACACTTAAATGCTCCAATTACATAAAAAGAGTATCTGAACAACACACTGAAACAACCGATGTGGGCTAAAACGTTGGTTATTCGCTAATGAGATAATTACAGTTTGGTGAACATCCCCTTCTCCAGTTTGATTCCTGTGGGACAGATGGAGTGAAATTGGAGCAGGAGGAAACCATTGATGCAGTGGA                                                                                                                                                                     ]
[+] EMBL CA329650             [                                                         CACAGGAGCTGAGATTTTATTTTCGATCAGTTCTTTTACTGTAATGTAACAAAAAAAAAAAAAAAAAGTTTAAGAACACACTTAAATGCTCCAATTACATAAAAAGAGTATCTGAACAACACACTGAAACAACCGATGTGGGCTAAAACGTTGGTTATTCGCTAATGAGATAATTAAAGTTTGGTGAACATCCCCTTCTCCAGTTTGATTCCTGTGGGACAGATGGAGTGAAATTGGAGCAGGAGGAAACCATTGATGCAGTGGACGAGGTCCCAGTTTTACCCTCCATGTGTCAGCCCACTCTAATTAACCAGGCCCAAAGCATCCATTTTTAATGAGTGCTGGGGATGGTGACAGAAAACAGAAGGAGAAGGCCTGCTTTGCTCTTTTCATCCATTCAAAAACCCCCAAAATAGGACAACAATGAAGG]




>consensus_187#0
AAAAAAATTGGTCCCGGGCCCCCCCCCGGGGGTTTTTTTTTTTTTCTTTTTTTTTTTCAC
AGGGGCTGGGATTTTAATTTGGACCAGTTCTTTAACGGAAATGTAACAAAAAAAAAAAAA
AAAAGTTTAAGAACACACTTAAATGCTCCAATTACATAAAAAGAGTATCTGAACAACACA
CTGAAACAACCGATGTGGGCTAAAACGTTGGTTATTCGCTAATGAGATAATTAAAGTTTG
GTGAACATCCCCTTCTCCAGTTTGATTCCTGTGGGACAGATGGAGTGAAATTGGAGCAGG
AGGAAACCATTGATGCAGTGGACGAGGTCCCAGTTTTACCCTCCATGTGTCAGCCCACTC
TAATTAACCAGGCCCAAAGCATCCATTTTTAATGAGTGCTGGGGATGGTGACAGAAAACA
GAAGGAGAAGGCCTGCTTTGCTCTTTTCATCCATTCAAAAACCCCCAAAATAGGACAACA
ATGAAGG

clustalw multiple alignements is not computed in this case
Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner    (hubert.wassner@noos.fr)