Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Takifugu rubripes
cluster # 2072 cluster # 2072       Sequences # 4       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2072#0 length = 935 sequences # 4  
consensusID : consensus_2072#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 935
fasta sequence 
                              [GACCCCGCTGTCTTCTGTCGAACTGTGTCACTCTGGTGTGACTGAATCTGAGAGTGAAAATGGCTGCAGGCAAAGCTCAAATTGGAAAATTGGCCCCAGACTTTACGGCCAAGGCCGTGATGCCAGATGGACAGTTCCAGGACCTGAAACTGTCAGATTACAGAGGAAAATATGTGGTCTTTTTCTTCTACCCGCTGGACTTCACCTTTGTCTGCCCCACTGAAATAATCGCCTTCAGTGATGCTGCTGAGGATTTCAGGAAAATTGGCTGCGAGGTAATCGCAGCCTCCGTTGACTCGCACTTCTCCCATTTTGCCTGGACCAACACACCACGTAAGCAGGGCGGTCTGGGGAGCATGAAAATTCCCCTTGTATCAGACACACGGCGCACAATCTCCACAGACTACGGAGTCCTGAAGGAAGATGAAGGCATCGCCTACAGAGGTCTGTTCATTATCGACCCCAAGGGTATCCTGAGACAGATCACCATAAATGACCTCCCAGTGGGACGCTCTGTTGAGGAGACCCTGCGTCTTGTCCAAGCCTTTCAGTTCACAGACAAGCACGGAGAAGTTTGTCCCGCCGGCTGGAAGCCAGGAAGTGACACCATCAAGCCCGACGTCCAGAAGAGCAAAGAATTCTTCTCCAAGCATTAACACCAAGGCCAAAACATGCAGCCTACTGTAGTGACCCAATGTGCTTGTCAAAATTGTGTAAGGAGAGCGGTTTTTGTAGTCCTGCTGTCCCTTGAGTTGATAGTGCATTACATAGTGCATTGATAGTCCAAAACAAATCGTGTAATTCATTTTGTGGTATATGTATTTAAACTCTTGAGCTAAATGTGTTTACGTATTTCATGCCCTACTTTTTATTGCAAACGACCACAGAGGAACTCCTGCTCACATGAACCCACACTTGTTGTTCTGTTAAGATAA]

[+] EMBL CA591411             [GTCTCCGCTGTCTTCTGTCGAACTGTATCACTCTGGTGTGACTGAATCTGAGAGTGAAAATGGCTGCAGGCAAAGCTCAAATTGGAAAATTGGCCCCAGACTTTACGGCCAAAGCCGTGATGCTAGATGGACAGTTCCAGGACCTGAAACTGTCAGATTACAGAGGAAAATATGTGGTCTTTTTCTTCTACCCGCTGGACTTCACCTTTGTCTGCCCCACTGAAATAATCGCCTTCAGTGATGCTGCTGAGGATTTCAGGAAAATTGGCTGCGAGGTAATCGCAGCCTCCGTTGACTCGCACTTCTCCCATTTTGCCTGGACCAACACACCACGTAAGCAGGGCGGTCTGGGGAGCATGAAAATTCCCCTTGTATCAGACACACGGCGCACAATCTCCACAGACTACGGAGTCCTGAAGGAAGATGAAGGCATCGCCTACAGAGGTCTGTTCATTATCGACCCCAAGGGTATCCTGAGACAGATCACCATAAATGACCTCCCAGTGGGACGCTCTGTTGAGGAGACCCTGCGTCTTGTCCAAGCCTTTCAGTTCACAGACAAGCACGGAGAAGTTTGTCCCGCCGGCTGGAAGCCAGGAAGTGACACCATC                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL BU804547             [tACCTTCCTGTCTTCTGTCGAACTGTGTCCCTCTGGTGTGACTGAATCTGAGAGTGAAAATGGCTGCAGGCAAAGCTCAAATTGGAAAATTGGCCCCAGACTTTACGGCCAAGGCCGTGATGCCAGATGGACAGTTCCAGGACCTGAAACTGTCAGATTACAGAGGAAAATATGTGGTCTTTTTCTTCTACCCGCTGGACTTCACCTTTGTCTGCCCCACTGAAATAATCGCCTTCAGTGATGCTGCTGAGGATTTCAGGAAAATTGGCTGCGAGGTAATCGCAGCCTCCGTTGACTCGCACTTCTCCCATTTTGCCTGGACCAACACACCACGTAAGCAGGGCGGTCTGGGGAGCATGAAAATTCCCCTTGTATCAGACACACGGCGCACAATCTCCACAGACTACGGAGTCCTGAAGGAAGATGAAGGCATCGCCTACAGAGGTCTGTTCATTATCGACCCCAAGGGTATCCTGAGACAGATCACCATAAATGACCTCCCAGTGGGACGCTCTGTTGAGGAGACCCTGCGTCTTGTCCAAGCCTTTCAGTTCACAGACAAGCACGGAGAAGTTTGTCCCGCCGGCTGGAAGCCAGGAAGTGACACCATCAAGCCCGACGTCCAGAAGAGCAAAGAA                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CA846659             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   CCCAGTGGGACGCTCTGTTGAGGAGACCCTGCGTCTTGTCCAAGCCTTTCAGTTCACAGACAAGCACGGAGAAGTTTGTCCCGCCGGCTGGAAGCCAGGAAGTGACACCATCAAGCCCGACGTCCAGAAGAGCAAAGAATTCTTCTCCAAGCATTAACACCAAGGCCAAAACATGCAGTCTACTGTAGTGACCCAATGTGCTTGTCAAAATTGTGTAAGGAGAGCGGTTTTTGTAGTCCTGTTGTCCCTTGAGTTGATAGTGCATTACATAGTGCATTGATAGTCCAAAACAAATCGTGTAATTCATTTTGTGGTATATGTATTTAAACTCTTGAGCTAAATGTGTTTACGTATTTCATGCCCTACTTTTTATTGCAAACGACCACAGAGGAACTCCTGCTCACATGAACCCACACTTGTTGTTCT          ]
[+] EMBL FR0056522            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     GCCGGCTGGAAGCCAGGAAGTGACACCATCAAGCCCGACGTCCAGAAGAGCAAAGAATTCTTCTCCAAGCATTAACACCAAGGCCAAAACATGCAGCCTACTGTAGTGACCCAATGTGCTTGTCAAAATTGTGTAAGGAGAGCGGTTTTTGTAGTCCTGCTGTCCCTTGAGTTGATAGTGCATTACATAGTGCATTGATAGTCCAAAACAAATCGTGTAATTCATTTTGTGGTATATGTATTTAAACTCTTGAGCTAAATGTGTTTACGTATTTCATGCCCTACTTTTTATTGCAAACGACCACAGAGGAACTCCTGCTCACATGAACCCACACTTGTTGTTCTGTTAAGATAA]




>consensus_2072#0
GACCCCGCTGTCTTCTGTCGAACTGTGTCACTCTGGTGTGACTGAATCTGAGAGTGAAAA
TGGCTGCAGGCAAAGCTCAAATTGGAAAATTGGCCCCAGACTTTACGGCCAAGGCCGTGA
TGCCAGATGGACAGTTCCAGGACCTGAAACTGTCAGATTACAGAGGAAAATATGTGGTCT
TTTTCTTCTACCCGCTGGACTTCACCTTTGTCTGCCCCACTGAAATAATCGCCTTCAGTG
ATGCTGCTGAGGATTTCAGGAAAATTGGCTGCGAGGTAATCGCAGCCTCCGTTGACTCGC
ACTTCTCCCATTTTGCCTGGACCAACACACCACGTAAGCAGGGCGGTCTGGGGAGCATGA
AAATTCCCCTTGTATCAGACACACGGCGCACAATCTCCACAGACTACGGAGTCCTGAAGG
AAGATGAAGGCATCGCCTACAGAGGTCTGTTCATTATCGACCCCAAGGGTATCCTGAGAC
AGATCACCATAAATGACCTCCCAGTGGGACGCTCTGTTGAGGAGACCCTGCGTCTTGTCC
AAGCCTTTCAGTTCACAGACAAGCACGGAGAAGTTTGTCCCGCCGGCTGGAAGCCAGGAA
GTGACACCATCAAGCCCGACGTCCAGAAGAGCAAAGAATTCTTCTCCAAGCATTAACACC
AAGGCCAAAACATGCAGCCTACTGTAGTGACCCAATGTGCTTGTCAAAATTGTGTAAGGA
GAGCGGTTTTTGTAGTCCTGCTGTCCCTTGAGTTGATAGTGCATTACATAGTGCATTGAT
AGTCCAAAACAAATCGTGTAATTCATTTTGTGGTATATGTATTTAAACTCTTGAGCTAAA
TGTGTTTACGTATTTCATGCCCTACTTTTTATTGCAAACGACCACAGAGGAACTCCTGCT
CACATGAACCCACACTTGTTGTTCTGTTAAGATAA

clustalw multiple alignements is not computed in this case
Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner    (hubert.wassner@noos.fr)