Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Takifugu rubripes
cluster # 2296 cluster # 2296       Sequences # 5       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2296#0 length = 646 sequences # 5  
consensusID : consensus_2296#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 646
fasta sequence 
                              [CACAGATACACAACGGTTGTTTAAACTCGAGGGTAAGCGGCATCATGGAGGCCATGACGAAGAGGTTAAAGACCTTTCAGGTGGTTTTTACGGACCCCACCAAGACGTTTTTCTGCGGCGGGGACGTGGTGTCCGGACGGGTTCAGGTGGAAGTGAGCGAGGCGACCCGCGTGTCCGCCGTCAGGCTTCTGGCTCTCGGCTGCGCCAAGGTGGAGTACGCCAAAGGCAAGCAGCGGT-GCCGACAGGAGGCCGAATACCTCCGACACGAAGAGGTGCTTCGCCTGGACAGTCAGCCCACAGATTCAGATGGGTCGGTGGTTTTAAGGCCCGGAAATAAATATGAGTATACCTTCCGATTTGAGCTGCCACAGAACGGGCCGCTGGTGTCCCCCTATCAGGCCAAGTTCGGGTACCGCGCCCTATTATGTGAAAGCTCCTCTTCGGACGACCTAAGCCGCCGCCCCCCGGAGTGCAAAACAGTCCTCTCGCCTGTGTAAGCAACCTCCGGGCTGGCCACCCCCCCTGAACTCGCTGTCTCACACCGGCCGTGCATGTCCCGCCGATGGTCTCCCCCCCTTCCCCGCGTGGGCCCCCGACCGCACTTGTCGCGCCTCTCGCCGGCCGCGATGCCTACCCCCTACCCGCG]

[+] EMBL FR0058899            [CACAGATACACAACGGTTGTTTAAACTCGAGGGTAAGTTGCATCATGGAGGCCATGACGAAGGGATTAAAGACCTTTCAGGGGGTTTTCCCGGACCCCACCAAGACGTTTTTCTGCGGCGGGGACGTGGTGTCCGGACTGGTTCAGGTGGAAGTGAGCGAGGCGACCCCCGTGTCCGCCGTCA GTTTTTTGCTCTCGGCTGC CCAAGGTGGAGAA                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CA333353             [      TACACAACGGTTGTTTAAACTCGAGGGTAAACGGCATCATGGTGGCCATGACGAAGAGGTTAAAGACCTTTCAGGTGGTTTTTACGGACCCCACCAAGACGTTTTTCTGCGGCGGGGACGTGGTGTCCGGACGGGTTCAGGTGGAAGTGAGCGAGGCGACCCGCGTGTCCGCCGTCAGGCTTCTGGCTCTCGGCTGCGCCAAGGTGGAGTACGCCAAAGGCAAGCAGCGTTCGTCGACAGGAGGCCGAATACCTCCGACACGAAGAGGTGCTTCGCCTGGACAGTCAGCCCACAGATTCAGATGGGTCGGTGGTTTTAAGGCCCGGAAATAAATATGAGTATACCTTCCGATTTGAGCTGCCACAGAACGGGCCGCTGGTGTCCCCCTATCAGGCCAAGTTCGGGTACCGCGCCCTATTATGTGAAAGCTCCTCTTCGGACGACCTAAGCCGCCGCCCCCCGGAGTGCAAAACAGTCCTCTCGCCTGTGTAAGCAACCTCCGGGCTGGCCACCCCCCCTGAACTCGCTGTCTCACACCGGCCGTGCATGTCCCGCCGATGGTCTCCCCCCCTTCCCCGCGTGGGCCCCCGACCGCACTTGTCGCGCCTCTCGCCGGCCGCGATGCCTACCCCCTACCCGCG]
[+] EMBL FR0058696            [                                                    CATGATGAAGAGGTTAAAGACCTTTCAGGTGGTTGTTACGGACCCCACCAAGACGTTTTTCTGCGGCGGGGACGTGGTGTCCGGACGGATTCAGGTGGAAGTGAGCGAGGCGACCCGCGTGTCCGCCGTCAGGCTTCTGGCTCTCGGCTGCGCCAGGGTGGAGTACGCCAAAGGCAAGCAGCGGT GCCGACAGTAGGCCG                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL FR0059435            [                                                                 ggAAAGACCTTTCAGGTGGTTTTTACGGACCCCACCAAGACGTTTTTCTGCGGCGGGGACGTGGTGTCCGGACGGGTTCAAGTGGAAGTGAGCGAGGCGACCCGCGTGTCCGCCGTCAGGCTTCTGGCTCTCGGCTGCGCCAAGGTGGAGTACGCCAAAGGCAAGCAGCGGT GCCGACAGGAGGCCGAATACCTCCGACACGAAGAGGTGCTTCGCCTGGACAGTCAGCCCACAGATTCAGATGGGTCGGTGGTTTTAAGGCCCCGAAATAAATATGAGTATACCTTTCGATT                                                                                                                                                                                                                                                                                                ]
[+] EMBL FR0058404            [                                                                                GTGGGGGTTACGGACCCCACCAAGACGTTTTTCTGCGGCGGGGACGTGGTGTCCGGACGGGTTCAGGTGGAAGTGAGCGA GCGACCCGCGTG CCGCCG  CAGCTTCT GCTCTCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]




>consensus_2296#0
CACAGATACACAACGGTTGTTTAAACTCGAGGGTAAGCGGCATCATGGAGGCCATGACGA
AGAGGTTAAAGACCTTTCAGGTGGTTTTTACGGACCCCACCAAGACGTTTTTCTGCGGCG
GGGACGTGGTGTCCGGACGGGTTCAGGTGGAAGTGAGCGAGGCGACCCGCGTGTCCGCCG
TCAGGCTTCTGGCTCTCGGCTGCGCCAAGGTGGAGTACGCCAAAGGCAAGCAGCGGTGCC
GACAGGAGGCCGAATACCTCCGACACGAAGAGGTGCTTCGCCTGGACAGTCAGCCCACAG
ATTCAGATGGGTCGGTGGTTTTAAGGCCCGGAAATAAATATGAGTATACCTTCCGATTTG
AGCTGCCACAGAACGGGCCGCTGGTGTCCCCCTATCAGGCCAAGTTCGGGTACCGCGCCC
TATTATGTGAAAGCTCCTCTTCGGACGACCTAAGCCGCCGCCCCCCGGAGTGCAAAACAG
TCCTCTCGCCTGTGTAAGCAACCTCCGGGCTGGCCACCCCCCCTGAACTCGCTGTCTCAC
ACCGGCCGTGCATGTCCCGCCGATGGTCTCCCCCCCTTCCCCGCGTGGGCCCCCGACCGC
ACTTGTCGCGCCTCTCGCCGGCCGCGATGCCTACCCCCTACCCGCG

clustalw multiple alignements is not computed in this case
Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner    (hubert.wassner@noos.fr)