Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Takifugu rubripes
cluster # 2404 cluster # 2404       Sequences # 6       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2404#0 length = 629 sequences # 6  
consensusID : consensus_2404#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 629
fasta sequence 
                              [CAAGAAACCCCAGCCTGAAGGAACAAACACCGAATATTCTGCATCTTTACAAGCTCTTGTCTCTTTCAACATTTCACTGTAACTCTTAACTCCTTACAAAGAAGATGCCTCAGAACGAGCACATCGAGTTGCATCGCAAGCGGCACGGTTATCGCCTTGACCATCATGAAAAGAAAAGGAAGAAGGAGAGCCGTGAGGCTCATGAAAGGTCTCACAAAGCCAGGAAGCTGA-TCGGGTTGAAGGCCAAATTGTACCACAAACAAAGACATGCTGAAAAGATTCAGATGAAGAAAACTATCAAAATGCATGAACAGAGAAATACCAAGCAGAAGAATGATGATAAAACACCACAGGGAGCCGTGCCGGCATACTTGTTGGACAGAGAGGGTCAGTCCCGCGCTAAGGTTCTGTCCAACATGATCAAACAGAAGAGGAAAGAGAAGGCTGGCAAATGGGAGGTGCCTCTTCCCAAAGTGCGAGCACAAGGAGAAACAGAAGTTCTTAAAGTCATCAAAACTGGAAAGAGACAGAAAAAGGCATGGAAGAGAATGGTCACAAAGGTTTGCTTTGTCGGGGATGGCTTTACCCGGGAAACTCCAAAGTATGAGCGTTTCATCAGGCCCATGGGT]

[+] EMBL CA591308             [CAAGAAACCCCAGCCTGAAGGAACAAACACCGAATATTCTGCATCTTTACAAGCTCTTGTCTCTTTCAACATTTCACTGTAACTCTTAACTCCTTACAAAGAAGATGCCTCAGAACGAGCACATCGAGTTGCATCGCAAGCGGCACGGTTATCGCCTTGACCATCATGAAAAGAAAAGGAAGAAGGAGAGCCGTGAGGCTCATGAAAGGTCTCACAAAGCCAGGAAGCTGA TCGGGTTGAAGGCCAAATTGTACCACAAACAAAGACATGCTGAAAAGATTCAGATGAAGAAAACTATCAAAATGCATGAACAGAGAAATACCAAGCAGAAGAATGATGATAAAACACCACAGGGAGCCGTGCCGGCATACTTGTTGGACAGAGAGGGTCAGTCCCGCGCTAAGGTTCTGTCCAACATGATCAAACAGAAGAGGAAAGAGAAGGCTGGCAAATGGGAGGTGCCTCTTCCCAAAGTGCGAGCACAAGGAGAAACAGAAGTTCTTAAAGTCATCAAAACTGGAAAGAGACAGAAAAAGGCATGGAAGAGAATGGTCACAAAAGTTTGCTTTGTCGGGGATGGCTTTACCCGGGAAACTCCAAAGTATGAGCGTTTCATCAGGCCCATGGGT]
[+] EMBL BU808509             [CAAGAAACCCCAGCCTGAAGGAACAAACACCGAATATTCTGCATCTTTACAAGCTCTTGTCTCTTTCAACATTTCACTGTAACTCTTAACTCCTTACAAAGAAGATGCCTCAGAACGAGCACATCGAGTTGCATCGCAAGCGGCACGGTTATCGCCTTGACCATCATGAAAAGAAAAGGAAGAAGGAGAGCCGTGAGGCTCATGAAAGGTCTCACAAAGCCAGGAAGCTGA TCGGGTTGAAGGCCAAATTGTACCACAAACAAAGACATGCTGAAAAGATTCAGATGAAGAAAACTATCAAAATGCATGAACAGAGAAATACCAAGCAGAAGAATGATGATAAAACACCACAGGGAGCCGTGCCGGCATACTTGTTGGACAGAGAGGGTCAGTCCCGCGCTAAGGTTCTGTCCAACATGATCAAACAGAAGAGGAAAGAGAAGGCTGGCAAATGGGAGGTGCCTCTTCCCAAAGTGCGAGCACAAGGAGAAACAGAAGTTCTTAAAGTCATCAAAACTGGAAAGAGACAGAAAAAGGCATGGAAGAGAATGGTCACAAAGGTTTGCTTTGTCGGCGATGGCTTTACCCGGAAACCTCCAAAGTATG                       ]
[+] EMBL CA846815             [  AGAAACCCCAGCCTGAAGGAACTTACACCGAATATTCTGCATCTTTACAAGCTCTTGTCTCTTTCAACATTTCACTGTAACTCTTAACTCCTTACAAAGAAGATGCCTCAGAACGAGCACATCGAGTTGCATCGCAAGCGGCACGGTTATCGCCTTGACCATCATGAAAAGAAAAGGAAGAAGGAGAGCCGTGAGGCTCATGAAAGGTCTCACAAAGCCAGGAAGCTGA TTTTTTTGAAGGCCAAATTGTACCACAAACAAAGACATGCTGAAAAGATTCAGATGAAGAAAACTATCAAAATGCATGAACAGAGAAATACCAAGCAGAAGAATGATGATAAAACACCACAGGGAGCCGTGCCGGCATACTTGTTGGACAGAGAGGGTCAGTCCCGCGCTAAGGTTCTGTCCAACATGATCAAACAGAAGAGGAAAGAGAAGGCTGGCAAATGGGAGGT                                                                                                                                                                         ]
[+] EMBL FR0055222            [            GCCTGAAGGAACAAACACCGAATATTCTGCATCTTTACAAGCTCTTGTCTCTTTCAACATTTCACTGTAACTCTTAACTCCTTACAAAGAAGATGCCTCAGAACGAGCACATCGAGTTGCATCGCAAGCGGCACGGTTATCGCCTTGACCATCATGAAAAGAAAAGGAAGAAGGAGAGCCGTGAGGCTCATGAAAGGTCTCACAAAGCCAGGAAGCTGA TCGGATTGAAGGCCAAATTGTACCACATACACAGACATGCTGAGAAGATTCAGATGAAGAAAACTATCAAAATGCATGAACAGAGAAATACCAAGCAGCAGAATGATGATAAAACACCACAGGGAGCCGTGCCGGCATACTTGTTGGACAGAGAGGGTCAGTCCCGCGCTAAGGTTCTGTCCAACATGATCAAACAGAAGAGGAAAGAGAAGGCTGGCAAATGGCAGGTGCCTCTTCCCAAAGTGCGAGCACAAGGAGAAACAGGAGTTCTTAAAGTCA                                                                                                                       ]
[+] EMBL FR0056604            [                   GGAACAAACACCGAATATTCTGCATCTTTACAAGCTCTTGTCTCTTTCAACATTTCACTGTGACTCTTAACTCCTTACAAAGAAGATGCCTCAGAACGAGCACATCGAGTTGCATCGCAAGCGGCACGGTTATCGCCTTGACCATCATGAAAAGAGAAGGAAGAAGGAGAGCCGTGAGGCTCATGAAAGGTCTCACAAAGCCAGGAAGCTGAGTCGGATTGAAGGGCAGATTGTACCAGAGACAGAGGCA                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL FR0062262            [                                                   AGCTCTTGTCTCTTTCAACATTTCACTGTAACTCTTAACTCCTTACAAAGAAGATGCCTCGGAACGAGCACATCGAGTTGCATCGCAAGCGGCACGGTTATCGCCTTGACCATCATGAAAAGAAAAGGAAGAAGGAGAGCCGTGAGTCTTATGAAAGGTCTCACAAAGCC                                                                                                                                                                                                                                                                                                                                                                                                                         ]




>consensus_2404#0
CAAGAAACCCCAGCCTGAAGGAACAAACACCGAATATTCTGCATCTTTACAAGCTCTTGT
CTCTTTCAACATTTCACTGTAACTCTTAACTCCTTACAAAGAAGATGCCTCAGAACGAGC
ACATCGAGTTGCATCGCAAGCGGCACGGTTATCGCCTTGACCATCATGAAAAGAAAAGGA
AGAAGGAGAGCCGTGAGGCTCATGAAAGGTCTCACAAAGCCAGGAAGCTGATCGGGTTGA
AGGCCAAATTGTACCACAAACAAAGACATGCTGAAAAGATTCAGATGAAGAAAACTATCA
AAATGCATGAACAGAGAAATACCAAGCAGAAGAATGATGATAAAACACCACAGGGAGCCG
TGCCGGCATACTTGTTGGACAGAGAGGGTCAGTCCCGCGCTAAGGTTCTGTCCAACATGA
TCAAACAGAAGAGGAAAGAGAAGGCTGGCAAATGGGAGGTGCCTCTTCCCAAAGTGCGAG
CACAAGGAGAAACAGAAGTTCTTAAAGTCATCAAAACTGGAAAGAGACAGAAAAAGGCAT
GGAAGAGAATGGTCACAAAGGTTTGCTTTGTCGGGGATGGCTTTACCCGGGAAACTCCAA
AGTATGAGCGTTTCATCAGGCCCATGGGT

clustalw multiple alignements is not computed in this case
Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner    (hubert.wassner@noos.fr)