Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Takifugu rubripes
cluster # 2540 cluster # 2540       Sequences # 7       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2540#0 length = 713 sequences # 7  
consensusID : consensus_2540#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 713
fasta sequence 
                              [CTCATTCTCCCCCTCATCATCTCGTGGAAGACTTTGTCCTAGATAAATACGATGTCTGCGTCTAACTACTCGTTGAAAATCAACCGTGACCTATTGGACCCTGGATTTGAGAGTTATAGGTTATCACAA-GACACCATCCCGATGTACAAAGTTGATCTGGATGCTGATGTTGAGGAGCTGAAGTTGAATGAATACACCCTGGAACACGTGCGTGCGTTCGGCATGTACAACCATCTCCACTTAGATCCTTGGTATGAAGACAGTGTCTTGTTTGTGGACGGCAGAGGGAGAGTTCTCAGTTTCACAGTCATCCTGGACGCTGCCCTGGGGAAGCCAAGAGAGGTCTACTGTGTGGCCCCTGACACCAGTGAGCACCGGGATCGTGTGTGTGCGTCCCTCAGCCTCACCTCGGCCACCTGGGCGACCCTCTCGGACGGCTCGGGCAGACTGGATCTTCTTCGCACTGGGAAAAGGGGCGACAGCTGTCACACGAAATGGGAACCACTGTTCAGCCAGGACATGGGGGCCCCGTTCACCCTCCTGCACAGCGTGGCACATGTGCAGGATAACGTTCACACCCTGGAGGTCCTGCTGCTCCGCATCCAGAAAGATCCGGAGGAAACCAAAGGAAGTGGATTTTCAGTGTTTCTTGAGTGGATCACAGTCGCCAACACTGCTCAACAAGGTCAGGAGGCGAAGTACGAGATGAAGAA]

[+] EMBL CA844720             [CTCATTCTCCCCCTCATCATCTCGTGGAAGACTTTGTCCTAGATAAATACGATGTCTGCGTCTAACTACTCGTTGAAAATCAACCGTGACCTATTGGACCCTGGATTTGAGAGTTATAGGTTATCACAA GACACCATCCCGATGTACAAAGTTGATCTGGATGCTGATGTTGAGGAGCTGAAGTTGAATGAATACACCCTGGAACACGTGCGTGCGTTCGGCATGTACAACCATCTCCACTTAGATCCTTGGTATGAAGACAGTGTCTTGTTTGTGGACGGCAGAGGGAGAGTTCTCAGTTTCACAGTCATCCTGGACGCTGCCCTGGGGAAGCCAAGAGAGGTCTACTGTGTGGCCCCTGACACCAGTGAGCACCGGGATCGTGTGTGTGCGTCCCTCAGCCTCACCTCGGCCACCTGGGCGACCCTCTCGGACGGCTCGGGCAGACTGGATCTTCTTCGCACTGGGAAAAGGGGCGACAGCTGTCACACGAAATGGGAACCACTGTTCAGCCAGGACATGGGGGCCCCGTTCACCCTCCTGCACAGCGTGGCACATGTGCAGGATAACGTTCACACCCTGGAGGTCCTGCTGCTCCGCATCCAGAAAGATCCGGAGGAAACCAAAGGAAGTGGATTTTCAGTGTTTCTTGAGTGGATCACAGTCGCCAACACTGCTCAACAAGGTCAGGAGGCG                 ]
[+] EMBL BU806937             [   ATTCTCCCCCTCATCATCTCGTGGAAGACTTTGTCCTAGATAAATACGATGTCTGCGTCTAACTACTCGTTGAAAATCAACCGTGACCTATTGGACCCTGGATTTGAGAGTTATAGGTTATCACAA GACACCATCCCGATGTACAAAGTTGATCTGGATGCTGATGTTGAGGAGCTGAAGTTGAATGAATACACCCTGGAACACGTGCGTGCGTTCGGCATGTACAACCATCTCCACTTAGATCCTTGGTATGAAGACAGTGTCTTGTTTGTGGACGGCAGAGGGAGAGTTCTCAGTTTCACAGTCATCCTGGACGCTGCCCTGGGGAAGCCAAGAGAGGTCTACTGTGTGGCCCCTGACACCAGTGAGCACCGGGATCGTGTGTGTGCGTCCCTCAGCCTCACCTCGGCCACCTGGGCGACCCTCTCGGACGGCTCGGGCAGACTGGATCTTCTTCGCACTGGGAAAAGGGGCGACAGCTGTCACACGAAATGGGAACCACTGTTCAGCCAGGACATGGGGGCCCCGTTCACCCTCCTGCACAGC                                                                                                                                                                    ]
[+] EMBL CA846030             [            CTCACTAAAAAGTGGAAGACTTTGTCCTAGATAAATACGATGTCT CGTTTAACTACTCGTTGAAAATCAACCGTGACCTATTGGACCCTGGATTTGAGAGTTATAGGTTATCACAA GACACCTTCCCGATGTACAAAGTTGATCTGGATGCTGATGTTGAGGAGCTGAAGTTGAATGAATACACCCTGGAACACGTGCGTGCGTTCGGCATGTACAACCATCTCCACTTAGATCCTTGGTATGAAGACAGTGTCTTGTTTGTGGACGGCAGAGGGAGAGTTCTCAGTTTCACAGTCATCCTGGACGCTGCCCTGGGGAAGCCAAGAGAGGTCTACTGTGTGGCCCCTGACACCAGTGAGCACCGGGATCGTGTGTGTGCGTCCCTCAGCCTCACCTCGGCCACCTGGGCGACCCTCTCGGACGGCTCGGGCAGACTGGATCTTCTTCGCACTGGGAAAAGGGGCGACAGCTGTCACACGAAATGGGAACCACTGTTCAGCCAGGACATGGGGGCCCCGTTCACCCTCCTGCACAGCGTGGCACATGTGCAGGATAACGTTCACACCCTGGAGGTCCTGCTGCTCCGCATCCAGAAAGATCCGGAGGAAACCAAAGGAAGTGGATTTTCAGTGTTTCTTGAGTGGATCACAGTCGCCAACACTGCTCAACAAGGTCAGGAGGCGAAGTACGAGATGAAGAA]
[+] EMBL CA590093             [            CTCATCATCTCGTGGAAGACTTTGTCCTAGATAAATACGATGTCTGCGTCTAACTACTCGTTGAAAATCAACCGTGACCTATTGGACCCTGGATTTGAGAGTTATAGGTTATCACAA GACACCATCCCGATGTACAAAGTTGATCTGGATGCTGATGTTGAGGAGCTGAAGTTGAATGAATACACCCTGGAACACGTGCGTGCGTTCGGCATGTACAACCATCTCCACTTAGATCCTTGGTATGAAGACAGTGTCTTGTTTGTGGACGGCAGAGGGAGAGTTCTCAGTTTCACAGTCATCCTGGACGCTGCCCTGGGGAAGCCAAGAGAGGTCTACTGTGTGGCCCCTGACACCAGTGAGCACCGGGATCGTGTGTGTGCGTCCCTCAGCCTCACCTCGGCCACCTGGGCGACCCTCTCGGACGGCTCGGGCAGACTGGATCTTCTTCGCACTGGGAAAAGGGGCGACAGCTGTCACACGAAATGGGAACCACTGTTCAGCCAGGACATGGGGGCCCCGTTCACCCTCCTGCACAGCGTGGCACATGTGCAGGATAACGTTCACACCCTGGAGGTCCTGCTGCTCCGCATCCAGAAAGATCCGGAGGAAACCAAAGGAAGTGGATTTTCAGTGTTTCTT                                                              ]
[+] EMBL FR0060395            [                                                           GTCTAACTACTCGTTGAAAATCAACCGTGACCTATTGGACCCTGGATTTGAGAGTTATAGGTTATCACAA GACACCATCCCGATGTACAAAGTTGATCTGGATGCTGATGTTGAGGAGCTGAAGTTGAATGAATACACCCTGGAACACGTGCGTGCGTTCGGCATGTACAACCATCTCCACTTAGATCCTTGGTATGAAGACAGTGTCTTGTTTGTGGACGGCAGAGGGAGAGTTCTCAGTTTCACGGTCATCCTGGACGCTGCCCTGNGGAAGCCAAGAGAGGTCTACTGTGTGGGCCCTGACACC                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL FR0060622            [                                                                   ACTCGTTGAGAATCAACCGTGACCTATTGGACCCTGGATTTGAGAGTTATAGGTTATCACAA GACACCATCCCGATGTACAAAGTTGATCTGGATGCTGATGTTGAGGAGCTGAAGTTGAATGAATACACCCTGGAACACGTGCGTGCGTTCGGCATGTACAACCATCTCCACTTAGATCCTTGGTATGAAGACAGTGTCTTGTTTGTGGACGGCAGAGGGAGATTTCTCAGTTTGACAGGCATTCTGGA                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL FR0061219            [                                                                                CAACCGTGACCTATTGGACGGTGGATTTGAGAGTTATAGGTTATCACAACCACACCATCCCGATGTACAAAGTTGATCTGGATGCTGATGTTGAGGAGCTGAAGTTGAATGAATACACCCTGGAACACGTGCGTGCGTTCGGCATGTACAACCATCTCCACTTAGATCCTTGGTATGAAGACAGTGTCTTGTTTGTGGACGGCAGAGGGAGAGTTCTCAGTTTCACAGTCATCCTGGACGCTGCCCTGGGGAAGCCAAGAGAGGTCTACTGTGTGGCCCCT                                                                                                                                                                                                                                                                                                                                                                 ]




>consensus_2540#0
CTCATTCTCCCCCTCATCATCTCGTGGAAGACTTTGTCCTAGATAAATACGATGTCTGCG
TCTAACTACTCGTTGAAAATCAACCGTGACCTATTGGACCCTGGATTTGAGAGTTATAGG
TTATCACAAGACACCATCCCGATGTACAAAGTTGATCTGGATGCTGATGTTGAGGAGCTG
AAGTTGAATGAATACACCCTGGAACACGTGCGTGCGTTCGGCATGTACAACCATCTCCAC
TTAGATCCTTGGTATGAAGACAGTGTCTTGTTTGTGGACGGCAGAGGGAGAGTTCTCAGT
TTCACAGTCATCCTGGACGCTGCCCTGGGGAAGCCAAGAGAGGTCTACTGTGTGGCCCCT
GACACCAGTGAGCACCGGGATCGTGTGTGTGCGTCCCTCAGCCTCACCTCGGCCACCTGG
GCGACCCTCTCGGACGGCTCGGGCAGACTGGATCTTCTTCGCACTGGGAAAAGGGGCGAC
AGCTGTCACACGAAATGGGAACCACTGTTCAGCCAGGACATGGGGGCCCCGTTCACCCTC
CTGCACAGCGTGGCACATGTGCAGGATAACGTTCACACCCTGGAGGTCCTGCTGCTCCGC
ATCCAGAAAGATCCGGAGGAAACCAAAGGAAGTGGATTTTCAGTGTTTCTTGAGTGGATC
ACAGTCGCCAACACTGCTCAACAAGGTCAGGAGGCGAAGTACGAGATGAAGAA

clustalw multiple alignements is not computed in this case
Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner    (hubert.wassner@noos.fr)