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These datas are free for academic use only, please contact me for any other use. Takifugu rubripes see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2602#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 913 fasta sequence
[CTGGGAGAGCCGGAAGAGCCGCAGATTCCCAGTCAGGGCGTCAAAGGCAGCGCTTCTTCCACCAGCAGGGAGATATTCATTTTATAACCCGGGACTCTGCTGCGGTTTCCTCGTTTGAAGAATGTGGAAGGCAACAGCCGGACAGTCGGTCAAAATAGCTCCAAGTGAGGAGGTGGACGACTGGGAGACCGACCCAGACTTTGAGAATGATGTGTCAGAGAAGGAGCAGCGCTGGGGGGCCAAGACGGTGGCGGGCTCAGGACATCAGGAACACATCAATATCCACCAGTTACGTCAG-ACGGTGTCCACAGAACACACC-TCCCTGAAGCAGCAGGAGATGGACACCATGCCCAGAGCCTCGTATGGATATGGAGGAAAGTTTGGACTTCAGGAGGACCGCATGGACAAGTCTGCAGTGGGTCACGACTACCAGAGCAAGTTGTCCAAACACTGTTCCCAGGTCGACACCTCCAAGGGCTTCGGAGGGAAGTTTGGAGTTCAGGCTGATCGTGTTGATCAGTCTGCTGTCGGTTTCGAGTATGCTGGGAAGACGGAGAAACACGCCTCTCAGAAAGATTACTCCAGTGGGTTTGGAGGGCGGTACGGAGTTCAGGCAGACCGTGTCGACAAGAGCGCCATGGGCTTCGATTACCAGGCCAAAACTGAGAAGCACGAGTCCCAGAAAGATTACACAAAGGGCTTCGGTGGCAAGTTTGGCGTTGAGACAGACAAGGTGGATAAAAGCGCCGTGGGCTTCGAGTATCAGGGCAAAACAGAGAAGCATGAATCCCAGAAAGACTACGTGAAGGGGTTTGGAGGGAAGGTTGGCGTGCAGACAGACCGACAGGACAAGTCTGCGCTTGGATGGGACCACCAGGAGAAGTTACAGCTGCACGAGTCTCAGAAAGATTAT]
[+] EMBL CA589762 [CTGGGAGAGCCGGAAGAGCCGCAGATTCCCAGTCAGAGCGTCTCCGTCAGCGCTTCTTCCACCAGCAGGGAGATATTCATTTTATAACCCGGGACTCTGCTGCGGTTTCCTCGTTTGAAGAATGTGGAAGGCAACAGCCGGACAGTCGGTCAAAATAGCTCCAAGTGAGGAGGTGGACGACTGGGAGACCGACCCAGACTTTGAGAATGATGTGTCAGAGAAGGAGCAGCGCTGGGGGGCCAAGACGGTGGCGGGCTCAGGACATCAGGAACACATCAATATCCACCAGTTACGTCAG ACGGTGTCCACAGAACACACC TCCCTGAAGCAGCAGGAGATGGACACCATGCCCAGAGCCTCGTATGGATATGGAGGAAAGTTTGGACTTCAGGAAGACCGCATGGACAAGTCTGCAGTGGGTCACGACTACCAGAGC ]
[+] EMBL CA588548 [ aGTCTTTAAAGGCAGCGCTTCTTCCACCAGCAGGGAGATATTCA TTCCTAAAAAGGGACTCTGCTGCGGTTTCCTCGTTTGAAGAATGTGGAAGGCAACAGCCGGACAGTCGGTCAAAATAGCTCCAAGTGAGGAGGTGGACGACTGGGAGACCGACCCAGACTTTGAGAATGATGTGTCAGAGAAGGAGCAGCGCTGGGGGGCCAAGACGGTGGCGGGCTCAGGACATCAGGAACACATCAATATCCACCAGTTACGTCAG ACGGTGTCCACAGAACACACC TCCCTGAAGCAGCAGGAGATGGACACCATGCCCAGAGCCTCGTATGGATATGGAGGAAAGTTTGTTCTTCAGGAGGACCGCATGGACAAGTCTGCAGTGGGTCACGACTACCAGAGCAAGTTGTCCAAACACTGTTCCCAGGTCGACACCTCCAAGGGCTTCGGAGGGAAGTTTGGAGTTCAGGCTGATCGTGTTGATCAGTCTGCTGTCGGTTTCGAGTATGCTGGGAAGACGGAGAAACACGCCTCTCAGAAAGATTACTCCAGTGGGTTTGGAGGGCGGTACGGAGTTCAGGCAGACCGTGTCGACAAGAGCGCCATGGGCTTCGATTACCAGGCCAAAACTGAGAAGCACGAGTCCCAGAAAGATTACACAAAGGGCTTCGGTGGCAAGTTTGGCGTTGAGACAGACAAGGTGGATAAAAGCGCCGTGGGCTTCGAGTATCAGGGCAAAACAGAGAAACATGAATCCCAGAAAGACTACGTGAAGGGGTTTGGAGGGAAGGTTGGCGTGCAGACA ]
[+] EMBL BU808281 [ ACCAGCAGGGAGATATTCATTTTATAACCCGGGACTCTGCTGCGGTTTCCTCGTTTGAAGAATGTGGAAGGCAACAGCCGGACAGTCGGTCAAAATAGCTCCAAGTGAGGAGGTGGACGACTGGGAGACCGACCCAGACTTTGAGAATGATGTGTCAGAGAAGGAGCAGCGCTGGGGGGCCAAGACGGTGGCGGGCTCAGGACATCAGGAACACATCAATATCCTCCAGTTACGTCAG ACGGTGTCCACAGAACACACC TCCCTGAAGCAGCAGGAGATGGACACCATGCCCAGAGCCTCGTATGGATATGGAGGAAAGTTTGGACTTCAGGAGGACCGCATGGACAAGTCTGCAGTGGGTCACGACTACCAGAGCAAGTTGTCCAAACACTGTTCCCAGGTCGACACCTCCAAGGGCTTCGGAGGGAAGTTTGGAGTTCAGGCTGATCGTGTTGATCAGTCTGCTGTCGGTTTCGAGTATGCTGGGAAGACGGAGAAACACGCCTCTCAGAAAGATTACTCCAGTGGGTTTGGAGGGCGGTACGGAGTTCAGGCAGACCGTGTCGACAAGAGCGCCATGGGCTTCGATTACCAGGCCAAAACT ]
[+] EMBL BU807132 [ ACCAGCAGGGAGATATTCATTTTATAACCCGGGACTCTGCTGCGGTTTCCTCGTTTGAAGAATGTGGAAGGCAACAGCCGGACAGTCGGTCAAAATAGCTCCAAGTGAGGAGGTGGACGACTGGGAGACCGACCCAGACTTTGAGAATGATGTGTCAGAGAAGGAGCAGCGCTGGGGGGCCAAGACGGTGGCGGGCTCAGGACATCAGGAACACATCAATATCCACCAGTTACGTCAG ACGGTGTCCACAGAACACACC TCCCTGAAGCAGCAGGAGATGGACACCATGCCCAGAGCCTCGTATGGATATGGAGGAAAGTTTGGACTTCAGGAGGACCGCATGGACAAGTCTGCAGTGGGTCACGACTACCAGAGCAAGTTGTCCAAACACTGTTCCCAGGTCGACACCTCCAAGGGCTTCGGAGGGAAGTTTGGAGTTCAGGCTGATCGTGTTGATCAGTCTGCTGTCGGTTTCGAGTATGCTGGGAAGACGGAGAAACACGCCTCTCAGAAAGATTACTCCAGTGGGTTTGGAGGGCGGTACGGAGTTCAGGCAGACCGTGTCGACAAGAGCGCCATGGGC ]
[+] EMBL CA590924 [ ACCAGCAGGGAGATATTCATTTTATAACCCGGGACTCTGCTGCGGTTTCCTCGTTTGAAGAATGTGGAAGGCAACAGCCGGACAGTCGGTCAAAATAGCTCCAAGTGAGGAGGTGGACGACTGGGAGACCGACCCAGACTTTGAGAATGATGTGTCAGAGAAGGAGCAGCGCTGGGGGGCCAAGACGGTGGCGGGCTCAGGACATCAGGAACACATCAATATCCACCAGTTACGTCAG ACGGTGTCCACAGAACACACC TCCCTGAAGCAGCAGGAGATGGACACCATGCCCAGAGCCTCGTATGGATATGGAGGAAAGTTTGGACTTCAGGAGGACCGCATGGACAAGTCTGCAGTGGGTCACGACTACCAGAGCAAGTTGTCCAAACACTGTTCCCAGGTCGACACCTCCAAGGGCTTCGGAGGGAAGTTTGGAGTTCAGGCTGATCGTGTTGATCAGTCTGCTGTCGGTTTCGAGTATGCTGGGAAGACCGAGAAACACGCCTCTCAGAAAGATTAC ]
[+] EMBL FR0061442 [ GAGATATTCATTTTATAACCCGGGACTCTGCTGCGGTTTCCTCGTTTGAAGAATGTGGAAGGCAACAGCCGGACAGTCGGTCAAAATAGCTCCAAGTGAGGAGGTGGACGACTGGGAGACCGACCCAGACTTTGAGAATGATGTGTCAGAGAAGGAGCAGCGCTGGGGGGCCAAGACGGTGGCGGGCTCAGGACATCAGGAACACATCAATATCCACCAGTTACGTCAG ACGGTGTCCACAGAACACACC TCCCTGAAGCAGCAGGAGATGGACACCATGCCCAGAGCCTCGTATGGATATGGAGGAAAGTTTGGACTTCAGGAGGACCGCATGGACAAGTCTGCAGTGGGTCACGACTACCAGAGCAAGTTGTCCAAACACTGTTCCCAGGTCGACACCTCCAAGGGCTTCCG ]
[+] EMBL FR0058637 [ CTGCTGCGGTTTGGGCGTTTGAAGAATGTGGAAAGCAACAGCCGGACAGTCGGTCAAAATAGCTCCAAGTGAGGAGGTGGACGACTGGGAGACCGACCCAGACTTTGAGAATGATGTGTCAGAGAAGGAGCAGCGCTGGGGGGCCAAAACGGTGGCGGGCTCAGGACATCAGGAACACATCAATATCCACCAGTTACGTCAGAACGGTGTCCACAGAACACACCTTCCCTGAGGCAGCAGGAGAAGGACACCATGCCCAGAGCCTCGTATGGATAT ]
[+] EMBL BU807942 [ CAGCCGGACAGTCGGTCAAAATAGCTCCAAGTGAGGAGGTGGACGACTGGGAGACCGACCCAGACTTTGAGAATGATGTGTCAGACAAGGAGCAGCGCTGGGGGGCCAAGACGGTGGCGGGCTCATGACATCACGAACACATCAATATCCTCCAGATACGTCAG ACGGTGTCCACAGAACACACC TCCCTGAAGCAGCAGGAGATGGACACCATGCCCAGAGCCTCGTATGGATATGGAGGAAAGTTTGGACTTCAGGAGGACCGCATGGACAAGTCTGCAGTGGGTCACGACTACCAGAGCAAGTTGTCCAAACACTGTTCCCAGGTCGACACCTCCAAGGGCTTCGGAGGGAAGATTGGAGTTCAGGCTGATCGTGTTGATCAGTCTGCTGTCGGTTTCGAGTATGCTGGGAAGACGGAGAAACACGCCTCTCATAAAGATTACTCCAGTGGGTTTGGAGGGCGG ]
[+] EMBL FR0060401 [ GTTTGGAGGGCGGTACGGAGTTCAGGCAGACCGTGTCGACAAGAGCGCCATGGGCTTCGATTACCAGGCCAAAACTGAGAAGCACGAGTCCCAGAAAGATTACACAAAGGGCTTCGGTGGCAAGTTTGGCGTTGAGACAGACAAGGTGGATAAAAGCGCCGTGGGCTTCGAGTATCAGGGCAAAACAGAGAAGCATGAATCCCAGAAAGACTACGTGAAGGGGTTTGGAGGGAAGTTTGGCGTGCAGACAGACCGACAGGACAAGTCTGCGCTTGGATGGGACCACCAGGAGAAGTTACAGCTGCACGAGTCTCAGAAAGATTAT]
clustalw multiple alignements is not computed in this case |
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| Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |