Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Takifugu rubripes
cluster # 2613 cluster # 2613       Sequences # 9       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2613#0 length = 766 sequences # 9  
consensusID : consensus_2613#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 766
fasta sequence 
                              [GGGGAGTCCTTGCTCATTTTTCCAACATGGGATTCGGTGACCTGAAGTCTGCCTCCGGCCTCAAAGTCCTCAATGACTTCCTGTCGTATCGGAGCTACATTGAGGGGTACGTCCCATCTCAGGCCGACACGGTTGTGTTTGATGCAATCTCATCACCCCCCCCAGCGGATCTGGTCCATGCCCTCCGCTGGTACAACCACATCAAGTCCTTCCAGAAGGGCAGTCTCCCAGGTGTGAAGAAACCTCTGGGTCAGTATGGTCCTCCGGGAGTGGCCGACACCACCTCTGCCTCCAAACCCGCTGCAAAGAAAGACGATGACGATGACATTGACCTGTTTGGCTCTGACGAAGAGGAAGATGAAGAGACTGCCAGGATAAAGGAAGAGCGTCTGGCACAATATGCTGCTAAAAAATCTAAGAAGCCCACCGTCATCGCTAAATCTTCACTCTTACTGGATGTTAAGCCCTGGGACGATGAGACGGACATGGCCAAGCTGGAGGAGTGCGTCCGCAGTATTCAGATGGACGGGCTAGTTTGGGGACAGTCTAAACTGGTCCCTGTTGGTTACGGCATCAAGAAGCTGCAGATTGGTTGCGTGGTGGAAGATGATAAGGTGGGCACTGAAATACTGGAGGAGCAAATCACGGCCTTTGAAGACTATGTTCAGTCAATGGACGTAGCTGCTTTCAACAAGATCTGAAAATGTCACATTAATAAAGCACTTCATAAAGGGGGGGGATGGGGGGGGGGGGATGGCGGGGGAAG]

[+] EMBL BU808068             [GGGGAGTCCTTGCTCATTTTTCCAACATGGGATTCGGTGACCTGAAGTCTGCCTCCGGCCTCAAAGTCCTCAATGACTTCCTGTCGTATCGGAGCTACATTGAGGGGTACGTCCCATCTCAGGCCGACACGGTTGTGTTTGATGCAATCTCATCACCCCCCCCAGCGGATCTGGTCCATGCCCTCCGCTGGTACAACCACATCAAGTCCTTCCAGAGGGGCAGTCTCCCAGGTGTGAAGAAACCTCTGGGTCAGTATGGTCCTCCGGGAGTGGCCGACACCACCTCTGCCTCCAAACCCGCTGCAAAGAAAGACGATGACGATGACATTGACCTGTTTGGCTCTGACGAAAAGGAAGATGAAGAGACTGCCAGGATAAAGGAAGAGCGTCTGGCACAATATGCTGCTAAAAAATCTAAGAAGCCCACCGTCATCGCTAAATCTTCACTCTT                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CA846714             [   GAGTCCTTGCTCATTTTTCCAACATGGGATTCGGTGACCTGAAGTCTGCCTCCGGCCTCAAAGTCCTCAATGACTTCCTGTCGTATCGGAGCTACATTGAGGGGTACGTCCCATCTCAGGCCGACACGGTTGTGTTTGATGCAATCTCATCACCCCCCCCAGCGGATCTGGTCCATGCCCTCCGCTGGTACAACCACATCAAGTCCTTCCAGAAGGGCAGTCTCCCAGGTGTGAAGAAACCTCTGGGTCAGTATGGTCCTCCGGGAGTGGCCGACACCACCTCTGCCTCCAAACCCGCTGCAAAGAAAGACGATGACGATGACATTGACCTGTTTGGCTCTGACGAAGAGGAAGATGAAGAGACTGCCAGGATAAAGGAAGAGCGTCTGGCACAATATGCTGCTAAAAAATCTAAGAAGCCCACCGTCATCGCTAAATCTTCACTCTTACTGGATGTTAAGCCCTGGGACGATGAGACGGACATGGCCAAGCTGGAGGAGTGCGTCCGCAGTATTCAGATGGACGGGCTAGTTTGGGGACAGTCTAAACTGGTCCCTGTTGGTTACGGCATCAAGAAACTGCAGATTGGTTGCGTGGTGGAAGATGATAAAGTGGGCACT                                                                                                                                               ]
[+] EMBL FR0055266            [                    TCCAACATGGGATTCGGTGACCTGAAGTCTGCCTCCGGCCTCAAAGTCCTCAATGACTTCCTGTCGTATCGGAGCTACATTGAGGGGTACGTCGCATCTCAGGCCGACACGGTTGTGTTTGATGCAATCTCATCACCCCCCCCAGCGGATCTGGTCCATGCCCTCCGCTGGTACAACCACATCAAGTCCTTCCAGAAGGGCAGTCTCCCAGGTGTGAAGAAACCTCTGGGTCAGTATGGTCCTCCGGGAGTGGCCGACACCACCTCTGCCTCCAAACCCGCTGCAGAGAAAGACGATGACGATGACATTGACCTGTTTGGCTCTGACGAAGAGGAAGATGAAGAGACTGCCAGGATATAGGACAAGCGTCTGGCACAATATGCTGGCTAAGAATCTAAGAAGCCCAGCGTCAT                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL FR0057420            [                                                 TGCCTCCGGCCTCAAAGTCCTCAATGACTTCCTGTCGTATCGGAGCTACATTGAGGGGTACGTCCCATCTCAGGCCGACACGGTTGTGTTTGATGCAATCTCATCACCCCCCCCAGCGGATCTGGTCCATGCCCTCCGCTGGTACAACCACATCAAGTCCTTCCAGAAGGGCAGTCTCCCAGGTGTGAAGAAACCTCTGGGTCAGTATGGTCCTCCGGGAGTGGCCGACACCACCTCTGCCTCCAAACCCGCTGCAAAGAAAGACGATGACGATGACATTGACCTGTTTGGCTCTGACGAAGAGGAAGATGAAGAGACTGCCAGGATAAAGGAAGAGCGTCTGGCACAATATGCTGCTAAAAAATCTAAGAAGCCCACCGTCATCGCTAAATCTTCACTCTTACTGGATGTGAAGCCCTGGG                                                                                                                                                                                                                                                                                                       ]
[+] EMBL FR0056651            [                                                                                                                                                                                                                                                                                                                                      ATTGACCTGTTTGGCTCTGACGAAGAGGAAGATGAAGAGACTGCCAGGATAAAGGAAGAGCGTCTGGCACAATATGCTGCTAAAAAATCTAAGAAGCCCACCGTCATCGCTAAATCTTCACTCTTACTGGATGTTAAGCCCTGGGACGATGAGACGGACATGGCCAAGCTGGAGGAGTGCGTCCGCAGTATTCAGATGGACGGGCTAGTTTGGGGACAGTCTAAACTGGTCCCTGTTGGTTACGGCATCAAGAAGCTGCAGATTGGTTGCGTGGTGGAAGATGATAAGGTGGGCACTGAAATACTGGAGGAGCAAATCACGGCCTTTGAAGACTATGTTCAGTCAATGGACGTAGCTGCTTTCAACAAGATCTGAAAATGTCACATTAATAAAGCACTTCATAGGGGGGGGGGATGGGGGGGGGGGGATGGCGGGGGAAG]
[+] EMBL CA845124             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             GCTGGAGGAGTGCGTCCGCAGTATTCAGATGGACGGGCTAGTTTGGGGACAGTCTAAACTGGTCCCTGTTGGTTACGGCATCAAGAAGCTGCAGATTGGTTGCGTGGTGGAAGATGATAAGGTGGGCACTGAAATACTGGAGGAGCAAATCACGGCCTTTGAAGACTATGTTCAGTCAATGGACGTAGCTGCTTTCAACAAGATCTGAAAATGTCACATTAATAAAGCACTTCA                                       ]
[+] EMBL CA845743             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        GATGGACGTTCTAGTTTGGGGACAGTCTAAACTGGTCCCTGTTGGTTACGGCATCAAGAAGCTGCAGATTGGTTGCGTGGTGGAAGATGATAAGGTGGGCACTGAAATACTGGAGGAGCAAATCACGGCCTTTGAAGACTATGTTCAGTCAATGGACGTAGCTGCTTTCAACAAGATCTGAAAATGTCACATTAATAAAGCACTTCATAAA                                   ]
[+] EMBL CA845648             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        GATGGACCTGCTAGTTTGGGGACAGTCTAAACTGGTCCCTGTTGGTTACGGCATCAAGAAGCTGCAGATTGGTTGCGTGGTGGAAGATGATAAGGTGGGCACTGAAATACTGGAGGAGCAAATCACGGCCTTTGAAGACTATGTTCAGTCAATGGACGTAGCTGCTTTCAACAAGATCTGAAAATGTCACATTAATAAAGCACTTCATAAA                                   ]
[+] EMBL CA330974             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        GATGGACGGGCTAGTTTGGGGACAGTCTAAACTGGTCCCTGTTGGTTACGGCATCAAGAAGCTGCAGATTGGTTGCGTGGTGGAAGATGATAAGGTGGGCACTGAAATACTGGAGGAGCAAATCACGGCCTTTGAAGACTATGTTCAGTCAATGGACGTAGCTGCTTTCAACAAGATCTGAAAATGTCACATTAATAAAGCACTTC                                        ]




>consensus_2613#0
GGGGAGTCCTTGCTCATTTTTCCAACATGGGATTCGGTGACCTGAAGTCTGCCTCCGGCC
TCAAAGTCCTCAATGACTTCCTGTCGTATCGGAGCTACATTGAGGGGTACGTCCCATCTC
AGGCCGACACGGTTGTGTTTGATGCAATCTCATCACCCCCCCCAGCGGATCTGGTCCATG
CCCTCCGCTGGTACAACCACATCAAGTCCTTCCAGAAGGGCAGTCTCCCAGGTGTGAAGA
AACCTCTGGGTCAGTATGGTCCTCCGGGAGTGGCCGACACCACCTCTGCCTCCAAACCCG
CTGCAAAGAAAGACGATGACGATGACATTGACCTGTTTGGCTCTGACGAAGAGGAAGATG
AAGAGACTGCCAGGATAAAGGAAGAGCGTCTGGCACAATATGCTGCTAAAAAATCTAAGA
AGCCCACCGTCATCGCTAAATCTTCACTCTTACTGGATGTTAAGCCCTGGGACGATGAGA
CGGACATGGCCAAGCTGGAGGAGTGCGTCCGCAGTATTCAGATGGACGGGCTAGTTTGGG
GACAGTCTAAACTGGTCCCTGTTGGTTACGGCATCAAGAAGCTGCAGATTGGTTGCGTGG
TGGAAGATGATAAGGTGGGCACTGAAATACTGGAGGAGCAAATCACGGCCTTTGAAGACT
ATGTTCAGTCAATGGACGTAGCTGCTTTCAACAAGATCTGAAAATGTCACATTAATAAAG
CACTTCATAAAGGGGGGGGATGGGGGGGGGGGGATGGCGGGGGAAG

clustalw multiple alignements is not computed in this case
Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner    (hubert.wassner@noos.fr)