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Takifugu rubripes
cluster # 2616 cluster # 2616       Sequences # 9       consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2616#0 length = 783 sequences # 6  
 consensus_2616#1 length = 602 sequences # 3  
consensusID : consensus_2616#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 783
fasta sequence 
                              [CAAGCCATCTCTGCAGCGCACCTCAGGGCAGCAACACGTGTTTCAACCACCCGAAACGTTTAACCCAACATTTAGTTTAAAAACGTTCACCAATCACGCTCACAAACATTCCAGCGACTCGGAGGGAGGTTGGTATTAAAAGCTGCTCCGTATCCGCAGTACTCCGTAGCTTCCACGATGTTCCCACCCAGTAGAATATTAAGAGGAAACCCCCGTCAGAGAAATCCCAACAACCCTCGGAAAAAAGATGGCGCCGCCCGGAGAGGTTGGAACGCCAGGCCACCCTTGGACCCCAACGTTCTGATTGAGAGATACAGGCAGGACGAGATGAATGCTCTGGCTTTAATCCACAACCTCGCTCAGGTTGTCCAATTCCAGCTGGAACTGAAGGAAACAGTAACTCCAGCACACGTGCACGGGCTTCACTTTGCTTTCTGTGCCGTGATTGACGGAGTCGAGTATAAGACCGGAATAGGAAAATCCAAGAAGGAGGCTCGGCTCCAGGCTGCCCAGTACGCTCTGGAGGACCTTCTGCCGGCTATAGAACATCTGAAGTCCGCCCTGCCTGAAACACCAGATTTCCCTCCACCTCTGCTGGTGAAAGATCCGTCCGACTTCATCAGAAGAACCAGTCATGGCGGCAGCTCAGTCAACCTCCAGATTCCTCAGGCTGTCAGATTCCAGTTAAATAAAGTATTCAGCCCCCACCCAGACATCTCTGTCTGCACAAGCACCACGGCGGCGTTCGTCATCCAGACTTCTGCTGGGTTTCAGGTGGTGGCT]

[+] EMBL CA333070             [CAAGCCATCTCTGCAGCGCACCTCAGGGCAGCAACACGTGTTTCAACCACCCGAAACGTTTAACCCAACATTTAGTTTAAAAACGTTCACCAATCACGCTCACAAACATTCCAGCGACTCGGAGGGAGGTTGGTATTAAAAGCTGCTCCGTATCCGCAGTACTTCGTAGCTTCCACGATGTTCCCACCCAGTAGAATATTAAGAGGAAACCCCCGTCAGAGAAATCCCAACAACCCTCGGAAAAAAGATGGCGCCGCCCGGAGAGGTTGGAACGCCAGGCCACCCTTGGACCCCAACGTTCTGATTGAGAGATACAGGCAGGACGAGATGAATGCTCTGGCTTTAATCCACAACCTCGCTCAGGTTGTCCAATTCCAGCTGGAACTGAAGGAAACAGTAACTCCAGCACACGTGCACGGGCTTCACTTTGCTTTCTGTGCCGTGATTGACGGAGTCGAGTATAAAACCGGAATAGGAAAATCCAAGAAGGAGGCTCGGCTCCAGGCTGCCCAGTACGCTCTGGAGGACCTTCTGCCGGCTATAGAACATCTGAAGTCCGCCCTGCCTGAAACACCAGAT                                                                                                                                                                                                            ]
[+] EMBL CA590583             [                     CTCAGGGCAGCAACACGTGTTTCAACCACCCGAAACGTTTAACCCAACATTTAGTTTAAAAACGTTCACCAATCACGCTCACAAACATTCCAGCGACTCGGAGGGAGGTTGGTATTAAAAGCTGCTCCGTATCCGCAGTACTCCGTAGCTTCCACGATGTTCCCACCCAGTAGAATATTAAGAGGAAACCCCCGTCAGAGAAATCCCAACAACCCTCGGAAAAAAGATGGCGCCGCCCGGAGAGGTTGGAACGCCAGGCCCCCCTTGGACCCCAACGTTCTGATTGAGAGATACAGGCAGGACGAGATGAATGCTCTGGCTTTAATCCACAACCTCGCTCAGGTTGTCCAATTCCAGCTGGAACTGAAGGAAACAGTAACTCCAGCACACGTGCACGGGCTTCACTTTGCTTTCTGTGCCGTGATTGACGGAGTCGAGTATAAGACCGGAATAGGAAAATCCAAGAAGGAGGCTCGGCTCCAGGCTGCCCAGTACGCTCTGGAGGACCTTCTGCCGGCTATAGAACATCTGAAGTCCGCCCTGCCTGAAACACCAGATTTCCCTCCACCTCTGCTGGTGAAAGATCC                                                                                                                                                                               ]
[+] EMBL FR0060593            [                                                                             TAAAAACGTTCACCAATCACGCTCACAAACATTCCAGCGACTCGGAGGGAGGTTGGTATTAAAAGCTGCTCCGTATCCGCAGTACTTCGGAGCTTCCACGATGTTCCCACCCAGTAGAATATTAAGAGGAAACCCCCGTCAGAGAAATCCCAACAACCCTCGGAAAAAAGATGGCGCCGCCCGGAGAGGTTGGAACGCTAGGCCACCCTTGGACCCCAACGTTCTGATTGAGAGATACAGGCAGGACGAGATGAATGCTCTGGCTTTAATCCACAACCTCGCTCAGGTTGGCCAATTCCAGCTGGAACTGAAGGAAACAGGAACTCCAGCACACGGGCA                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL FR0061027            [                                                                                       CACCAATCACGCTCACAAACATTCCAGCGACTCGTAGGGAGGTTGGTATTAAAAGCTGCTCCGTATCCGCAGTACTCCGTAGCTTCCACGATGTTCCCACCCAGTAGAATATTAAGAGGAAACCCCCGTCAGAGAAATCCCAACAACCCTCGGAAAAAAGATGGCGCCGCCCGGAGAGGTTGGAACGCCAGGCCCCCCTTGGACCCCAACGTTCTGATTGAGAGATACAGGCAGGACGAGATGAATGCTCTGGCTTTAATCCACAACCTCGCTCAGGTTGTCCAATTCCAGCTGGAACTGAAGGAAACAGTAACTCCAGCACACGTGCACGGGCTTCACTTTGCTTTCTGTGCCGTGA                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL FR0060218            [                                                                                                      CAAACATTCCAGCGACTCGGAGGGAGGTTGGTATTAAAAGCTGCTCCGTATCCGCAGTACTCCGTAGCTTCCACGATGTTCCCACCCAGTAGAATATTAAGAGGAAACCCCCGTCAGAGAAATCCCAACAACCCTCGGAAAAAAGATGGCGCCGCCCGGAGAGGTTGGAACGCCAGGCCCCCCTTGGACCCCAACGTTCTGATTGAGAGATACAGGCAGGACGAGATGAATGCTCTGGCTTTAATCCACAACCTCGCTCAGGTTGTCCAATTCCAGCTGGAACTGAAGGAAACAGTAACTCCAGCACACGTGCACGGGCTTCACTTTGCTTTCTGTGCCGTGATTGACGGAGTCGAGTATAAGACCGGAATAGGATAA                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CA590445             [                                                                                                                                                                                   GTTCCCACCCAGTAGAATATTAAGAGGAAACCCCCGTCAGAGAACTCCCAACAACCCTCGGAAAAAAGATGGCGCCGCCCGGAGAGGTTGGAACGCCAGGCCACCCTTGGACCCCAACGTTCTGATTGAGAGATACAGGCAGGACGAGATGAATGCTCTGGCTTTAATCCACAACCTCGCTCAGGTTGTCCAATTCCAGCTGGAACTGAAGGAAACAGTAACTCCAGCACACGTGCACGGGCTTCACTTTGCTTTCTGTGCCGTGATTGACGGAGTCGAGTATAAAACCGGAATAGGAAAATCCAAGAAGGAGGCTCGGCTCCAGGCTGCCCAGTACGCTCTGGAGGACCTTCTGCCGGCTATAGAACATCTGAAGTCCGCCCTGCCTGAAACACCAGATTTCCCTCCACCTCTGCTGGTGAAAGATCCGTCCGACTTCATCAGAAGAACCAGTCATGGCGGCAGCTCAGTCAACCTCCAGATTCCTCAGGCTGTCAGATTCCAGTTAAATAAAGTATTCAGCCCCCACCCAGACATCTCTGTCTGCACAAGCACCACGGCGGCGTTCGTCATCCAGACTTCTGCTGGGTTTCAGGTGGTGGCT]




>consensus_2616#0
CAAGCCATCTCTGCAGCGCACCTCAGGGCAGCAACACGTGTTTCAACCACCCGAAACGTT
TAACCCAACATTTAGTTTAAAAACGTTCACCAATCACGCTCACAAACATTCCAGCGACTC
GGAGGGAGGTTGGTATTAAAAGCTGCTCCGTATCCGCAGTACTCCGTAGCTTCCACGATG
TTCCCACCCAGTAGAATATTAAGAGGAAACCCCCGTCAGAGAAATCCCAACAACCCTCGG
AAAAAAGATGGCGCCGCCCGGAGAGGTTGGAACGCCAGGCCACCCTTGGACCCCAACGTT
CTGATTGAGAGATACAGGCAGGACGAGATGAATGCTCTGGCTTTAATCCACAACCTCGCT
CAGGTTGTCCAATTCCAGCTGGAACTGAAGGAAACAGTAACTCCAGCACACGTGCACGGG
CTTCACTTTGCTTTCTGTGCCGTGATTGACGGAGTCGAGTATAAGACCGGAATAGGAAAA
TCCAAGAAGGAGGCTCGGCTCCAGGCTGCCCAGTACGCTCTGGAGGACCTTCTGCCGGCT
ATAGAACATCTGAAGTCCGCCCTGCCTGAAACACCAGATTTCCCTCCACCTCTGCTGGTG
AAAGATCCGTCCGACTTCATCAGAAGAACCAGTCATGGCGGCAGCTCAGTCAACCTCCAG
ATTCCTCAGGCTGTCAGATTCCAGTTAAATAAAGTATTCAGCCCCCACCCAGACATCTCT
GTCTGCACAAGCACCACGGCGGCGTTCGTCATCCAGACTTCTGCTGGGTTTCAGGTGGTG
GCT

consensusID : consensus_2616#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 602
fasta sequence 
                              [CTCAGGGCAGCAACACGTGTTTCAACCACCCGAAACGTTTAACCCAACATTTAGTTTAAAAACGTTCACCAATCACGCTCACAAACATTCCAGCGACTCGGAGGGAGCGACCTTAGAGACAAGACTTCCATTTCTGTGCGTGTCTAGGTTGGTATTAAAAGCTGCTCCGTATCCGCAGTACTTCGTAGCTTCCACGATGTTCCCACCCAGTAGAATATTAAGAGGAAACCCCCGTCAGAGAAATC-CCAACAACCCTCGGAAAAAAGATGGCGCCGCCCGGAGAGGTTGGAACGCCAGGCCACCCTTGGACCCCAACGTTCTGATTGAGAGATACAGGCAGGACGAGATGAATGCTCTGGCTTTAATCCACAACCTCGCTCAGGTTGTCCAATTCCAGCTGGAACTGAAGGAAACAGTAACTCCAGCACACGTGCACGGGCTTCACTTTGCTTTCTGTGCCGTGATTGACGGAGTCGAGTATAAAACCGGAATAGGAAAATCCAAGAAGGAGGCTCGGCTCCAGGCTGCCCAGTACGCTCTGGAGGACCTTCTGCCGGCTATAGAACATCTGAAGTCCGCCCTGCCTGAAACACCAGATTTCC]

[+] EMBL CA590332             [CTCAGGGCAGCAACACGTGTTTCAACCACCCGAAACGTTTAACCCAACATTTAGTTTAAAAACGTTCACCAATCACGCTCACAAACATTCCAGCGACTCGGAGGGAGCGACCTTAGAGACAAGACTTCCATTTCTGTGCGTGTCTAGGTTGGTATTAAAAGCTGCTCCGTATCCGCAGTACTTCGTAGCTTCCACGATGTTCCCACCCAGTAGAATATTAAGAGGAAACCCCCGTCAGAGAAATC CCAACAACCCTCGGAAAAAAGATGGCGCCGCCCGGAGAGGTTGGAACGCCAGGCCACCCTTGGACCCCAACGTTCTGATTGAGAGATACAGGCAGGACGAGATGAATGCTCTGGCTTTAATCCACAACCTCGCTCAGGTTGTCCAATTCCAGCTGGAACTGAAGGAAACAGTAACTCCAGCACACGTGCACGGGCTTCACTTTGCTTTCTGTGCCGTGATTGACGGAGTCGAGTATAAAACCGGAATAGGAAAATCCAAGAAGGAGGCTCGGCTCCAGGCTGCCCAGTACGCTCTGGAGGACCTTCTGCCGGCTATAGAACATCTGAAGTCCGCCCTGCCTGAAACACCAGAT    ]
[+] EMBL CA333297             [CTCAGGGCAGCAACACGTGTTTCAACCACCCGAAACGTTTAACCCAACATTTAGTTTAAAAACGTTCACCAATCACGCTCACAAACATTCCAGCGACTCGGAGGGAGCGACCTTAGAGACAAGACTTCCATTTCTGTGCGTGTCTAGGTTGGTATTAAAAGCTGCTCCGTATCCGCAGTACTTCGTAGCTTCCACGATGTTCCCACCCAGTAGAATATTAAGAGGAAACCCCCGTCAGAGAAATC CCAACAACCCTCGGAAAAAAGATGGCGCCGCCCGGAGAGGTTGGAACGCCAGGCCACCCTTGGACCCCAACGTTCTGATTGAGAGATACAGGCAGGACGAGATGAATGCTCTGGCTTTAATCCACAACCTCGCTCAGGTTGTCCAATTCCAGCTGGAACTGAAGGAAACAGTAACTCCAGCACACGTGCACGGGCTTCACTTTGCTTTCTGTGCCGTGATTGACGGAGTCGAGTATAAAACCGGAATAGGAAAATCCAAGAAGGAGGCTCGGCTCCAGGCTGCCCAGTACGCTCTGGAGGACCTTCTGCCGGCTATAGAACATCTGAAGTCCGCCCTGCCTGAAACACCAGAT    ]
[+] EMBL BU807578             [ TCAGGGCAGCAACACGTGTTTCAACCACCCGAAACGTTTAACCCAACATTTAGTTTAAAAACGTTCACCAATCACGCTCACAAACATTCCAGCGACTCGGAGGGAGCGACCTTAGAGACAAGACTTCCATTTCTGTGCGTGTCTAGGTTGGTATTAAAAGCTGCTCCGTATCCGCAGTACTTCGTAGCTTCCACGATGTTCCCACCCAGTAGAATATTAAGAGGAAACCCCCGTCAGAGAAATCTTCAACAACCCTCGGAAAAAAGATGGCGCCGCCCGGAGAGGTTGGAACGCCAGGCCACCCTTGGACCCCAACGTTCTGATTGAGAGATACAGGCAGGACGAGATGAATGCTCTGGCTTTAATCCACAACCTCGCTCAGGTTGTCCAATTCCAGCTGGAACTGAAGGAAACAGTAACTCCAGCACACGTGCACGGGCTTCACTTTGCTTTCTGTGCCGTGATTGACGGAGTCGAGTATAAAACCGGAATAGGAAAATCCAAGAAGGAGGCTCGGCTCCAGGCTGCCCAGTACGCTCTGGAGGACCTTCTGCCGGCTATAGAACATCTGAAGTCCGCCCTGCCTGAAACACCAGATTTCC]




>consensus_2616#1
CTCAGGGCAGCAACACGTGTTTCAACCACCCGAAACGTTTAACCCAACATTTAGTTTAAA
AACGTTCACCAATCACGCTCACAAACATTCCAGCGACTCGGAGGGAGCGACCTTAGAGAC
AAGACTTCCATTTCTGTGCGTGTCTAGGTTGGTATTAAAAGCTGCTCCGTATCCGCAGTA
CTTCGTAGCTTCCACGATGTTCCCACCCAGTAGAATATTAAGAGGAAACCCCCGTCAGAG
AAATCCCAACAACCCTCGGAAAAAAGATGGCGCCGCCCGGAGAGGTTGGAACGCCAGGCC
ACCCTTGGACCCCAACGTTCTGATTGAGAGATACAGGCAGGACGAGATGAATGCTCTGGC
TTTAATCCACAACCTCGCTCAGGTTGTCCAATTCCAGCTGGAACTGAAGGAAACAGTAAC
TCCAGCACACGTGCACGGGCTTCACTTTGCTTTCTGTGCCGTGATTGACGGAGTCGAGTA
TAAAACCGGAATAGGAAAATCCAAGAAGGAGGCTCGGCTCCAGGCTGCCCAGTACGCTCT
GGAGGACCTTCTGCCGGCTATAGAACATCTGAAGTCCGCCCTGCCTGAAACACCAGATTT
CC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_2616#0      CAAGCCATCTCTGCAGCGCACCTCAGGGCAGCAACACGTGTTTCAACCACCCGAAACGTT 60
consensus_2616#1      ---------------------CTCAGGGCAGCAACACGTGTTTCAACCACCCGAAACGTT 39
                                           ***************************************

consensus_2616#0      TAACCCAACATTTAGTTTAAAAACGTTCACCAATCACGCTCACAAACATTCCAGCGACTC 120
consensus_2616#1      TAACCCAACATTTAGTTTAAAAACGTTCACCAATCACGCTCACAAACATTCCAGCGACTC 99
                      ************************************************************

consensus_2616#0      GGAGGGAG----------------------------------------GTTGGTATTAAA 140
consensus_2616#1      GGAGGGAGCGACCTTAGAGACAAGACTTCCATTTCTGTGCGTGTCTAGGTTGGTATTAAA 159
                      ********                                        ************

consensus_2616#0      AGCTGCTCCGTATCCGCAGTACTCCGTAGCTTCCACGATGTTCCCACCCAGTAGAATATT 200
consensus_2616#1      AGCTGCTCCGTATCCGCAGTACTTCGTAGCTTCCACGATGTTCCCACCCAGTAGAATATT 219
                      *********************** ************************************

consensus_2616#0      AAGAGGAAACCCCCGTCAGAGAAATCCCAACAACCCTCGGAAAAAAGATGGCGCCGCCCG 260
consensus_2616#1      AAGAGGAAACCCCCGTCAGAGAAATCCCAACAACCCTCGGAAAAAAGATGGCGCCGCCCG 279
                      ************************************************************

consensus_2616#0      GAGAGGTTGGAACGCCAGGCCACCCTTGGACCCCAACGTTCTGATTGAGAGATACAGGCA 320
consensus_2616#1      GAGAGGTTGGAACGCCAGGCCACCCTTGGACCCCAACGTTCTGATTGAGAGATACAGGCA 339
                      ************************************************************

consensus_2616#0      GGACGAGATGAATGCTCTGGCTTTAATCCACAACCTCGCTCAGGTTGTCCAATTCCAGCT 380
consensus_2616#1      GGACGAGATGAATGCTCTGGCTTTAATCCACAACCTCGCTCAGGTTGTCCAATTCCAGCT 399
                      ************************************************************

consensus_2616#0      GGAACTGAAGGAAACAGTAACTCCAGCACACGTGCACGGGCTTCACTTTGCTTTCTGTGC 440
consensus_2616#1      GGAACTGAAGGAAACAGTAACTCCAGCACACGTGCACGGGCTTCACTTTGCTTTCTGTGC 459
                      ************************************************************

consensus_2616#0      CGTGATTGACGGAGTCGAGTATAAGACCGGAATAGGAAAATCCAAGAAGGAGGCTCGGCT 500
consensus_2616#1      CGTGATTGACGGAGTCGAGTATAAAACCGGAATAGGAAAATCCAAGAAGGAGGCTCGGCT 519
                      ************************ ***********************************

consensus_2616#0      CCAGGCTGCCCAGTACGCTCTGGAGGACCTTCTGCCGGCTATAGAACATCTGAAGTCCGC 560
consensus_2616#1      CCAGGCTGCCCAGTACGCTCTGGAGGACCTTCTGCCGGCTATAGAACATCTGAAGTCCGC 579
                      ************************************************************

consensus_2616#0      CCTGCCTGAAACACCAGATTTCCCTCCACCTCTGCTGGTGAAAGATCCGTCCGACTTCAT 620
consensus_2616#1      CCTGCCTGAAACACCAGATTTCC------------------------------------- 602
                      ***********************                                     

consensus_2616#0      CAGAAGAACCAGTCATGGCGGCAGCTCAGTCAACCTCCAGATTCCTCAGGCTGTCAGATT 680
consensus_2616#1      ------------------------------------------------------------
                                                                                  

consensus_2616#0      CCAGTTAAATAAAGTATTCAGCCCCCACCCAGACATCTCTGTCTGCACAAGCACCACGGC 740
consensus_2616#1      ------------------------------------------------------------
                                                                                  

consensus_2616#0      GGCGTTCGTCATCCAGACTTCTGCTGGGTTTCAGGTGGTGGCT 783
consensus_2616#1      -------------------------------------------


Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner    (hubert.wassner@noos.fr)