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Takifugu rubripes
cluster # 2621 cluster # 2621       Sequences # 9       consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2621#0 length = 669 sequences # 2  
 consensus_2621#1 length = 622 sequences # 7  
consensusID : consensus_2621#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 669
fasta sequence 
                              [CCGCACGTTAGCACACTTCTCTCGTCCCTCAGACGCGTACGAGGAGTCATGGAGGCTGCGCATTCAGACCCTGGTGAAGGTCTTCCTGAAATCGTCCAAAGGAAGGGAGAGCCTAGGAAAGAAAGAGTTCCACACACTTGTCAAGAGCCAACTCTCCAACATCCTTTCGGACACTGACAGCAAGAAAGCTGTCAACAATATGGGCCAGGAGCTGGATGCCAACAAGGATGGGAAGGTTGGTTTTGAGGAGTACATGAAGCTGGTGGGCTACCTGGCGGNTTCACTCAGCGAACAGCGCACTCCCGCTAATCAAGAGCCGGCCACGAATGCTGCATCCGAGCCAGTGGCTCAGAGTGCCCCAGCCAGGGAGGAGGACAAATCAGAGGCTAAGGCGGAGGTGACCGAGGAGGCAGAAGCAGCCGCCGAACCGAAGGTAGAAGTCGATGCTGAAGGTGCCGCCAAGTTCGTGGCAGCGGTCGCAGAGGAGGAAGCGGCCGCGGCTGTAGAGGAAGCGGAGAAGAAGACGGAAGAGGCGACCTCGTAGGGGACAATCCATTCATTCCCAACCAAATCCGACGCGTACATCCCACACTACGGATCACATTACTCTCAAAGTTTCATGCCACTAAACCTTTTTTTTTTAAATGCAAACAACATTGACAACACTTT]

[+] EMBL FR0061192            [CCGCACGTTACCACACTTCTCTCGTCCCTCAGACGCGTACGAGGAGTCATGGAGGCTGCGCATTCAGACCCTGGTGAAGGTCTTCCTGAAATCGTCCAAAGGAAGGGAGAGCCTAGGAAAGAAAGAGTTCCACACACTTGTCAAGAGCCAACTCTCCAACATCCTTTCGGACACTGACAGCAAGAAAGCTGTCAACAATATGGGCCAGGAGCTGGATGCCAACAAGGATGGGAAGGTTGGTTTTGAGGAGTACATGAAGCTGGTGGGCTACCTGGCGGNTTCACTCAGCGAACAGCGCACTCCCGCTAATCAAGAGCCGGCCACGAATGCTGCATCCGAGCCAGTG                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CA846153             [      GTTAGCACACTTCTCTCGTCCCTCAGACGCGTACGACGATTCATGGAGGCTGC CATTCAGACCCTGGTGAAGGTCTTCCTGAAATCGTCCAAAGGAAGGGAGAGCCTAGGAAAGAAAGAGTTCCACACACTTGTCAAGAGCCAACTCTCCAACATCCTTTCGGACACTGACAGCAAGAAAGCTGTCAACAATATGGGCCAGGAGCTGGATGCCAACAAGGATGGGAAGGTTGGTTTTGAGGAGTACATGAAGCTGGTGGGCTACCTGGCGGTTTCACTCAGCGAACAGCGCACTCCCGCTAATCAAGAGCCGGCCACAAATGCTGCATCCGAGCCAGTGGCTCAGAGTGCCCCAGCCAGGGAGGAGGACAAATCAGAGGCTAAGGCGGAGGTGACCGAGGAGGCAGAAGCAGCCGCCGAACCGAAGGTAGAAGTCGATGCTGAAGGTGCCGCCAAGTTCGTGGCAGCGGTCGCAGAGGAGGAAGCGGCCGCGGCTGTAGAGGAAGCGGAGAAGAAGACGGAAGAGGCGACCTCGTAGGGGACAATCCATTCATTCCCAACCAAATCCGACGCGTACATCCCACACTACGGATCACATTACTCTCAAAGTTTCATGCCACTAAACCTTTTTTTTTTAAATGCAAACAACATTGACAACACTTT]




>consensus_2621#0
CCGCACGTTAGCACACTTCTCTCGTCCCTCAGACGCGTACGAGGAGTCATGGAGGCTGCG
CATTCAGACCCTGGTGAAGGTCTTCCTGAAATCGTCCAAAGGAAGGGAGAGCCTAGGAAA
GAAAGAGTTCCACACACTTGTCAAGAGCCAACTCTCCAACATCCTTTCGGACACTGACAG
CAAGAAAGCTGTCAACAATATGGGCCAGGAGCTGGATGCCAACAAGGATGGGAAGGTTGG
TTTTGAGGAGTACATGAAGCTGGTGGGCTACCTGGCGGNTTCACTCAGCGAACAGCGCAC
TCCCGCTAATCAAGAGCCGGCCACGAATGCTGCATCCGAGCCAGTGGCTCAGAGTGCCCC
AGCCAGGGAGGAGGACAAATCAGAGGCTAAGGCGGAGGTGACCGAGGAGGCAGAAGCAGC
CGCCGAACCGAAGGTAGAAGTCGATGCTGAAGGTGCCGCCAAGTTCGTGGCAGCGGTCGC
AGAGGAGGAAGCGGCCGCGGCTGTAGAGGAAGCGGAGAAGAAGACGGAAGAGGCGACCTC
GTAGGGGACAATCCATTCATTCCCAACCAAATCCGACGCGTACATCCCACACTACGGATC
ACATTACTCTCAAAGTTTCATGCCACTAAACCTTTTTTTTTTAAATGCAAACAACATTGA
CAACACTTT

consensusID : consensus_2621#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 622
fasta sequence 
                              [AGCGCACGTTAGCACACTTCTCTCGTCCCTCAGACGCGTACGAGGAGTCATGGAGGCTGCCATTCAGACCCTGGTGAAGGTCTTCCTGAAATCGTCCAAAGGAAGGGAGAGCCTAGGAAAGAAAGAGTTCCACACACTTGTCAAGAGCCAACTCTCCAACATCCTTTCGGACACTGACAGCAAGAAAGCTGTCAACAATATGGGCCAGGAGCTGGATGCCAACAAGGATGGGAAGGTTGGTTTTGAGGAGTACATGAAGCTGGTGGGCTACCTGGCGGTTTCACTCAGCGAACAGCGCACTCCCGCTAATCAAGAGCCGGCCACAAATGCTGCATCCGAGCCAGTGGCTCAGAGTGCCCCAGCCAGGGAGGAGGACAAATCAGAGGCTAAGGCGGAGGTGACCGAGGAGGCAGAAGCAGCCGCCGAACCGAAGGTAGACGCCAACGCAGAGCCAACGGTACAATTAAAGGTAGACGCCAAGGCCGAGCCAATGGTAGATTTGAAGGTGGAAGCTAACGCCAGCCCAAAGGTAGAAGTCGATGCTGAAGGTGCCGCCAAGATCGTGGCAGCGGTCGCAGAGGAGGAGCCGGCGGCGGCATCGGGAGGAGAGGTGACGGCAGCG]

[+] EMBL BU806188             [AGCGCACGTTAGCACACTTCTCTCGTCCCTCAGACGCGTACGAGGAGTCATGGAGGCTGCCATTCAGACCCTGGTGAAGGTCTTCCTGAAATCGTCCAAAGGAAGGGAGAGCCTAGGAAAGAAAGAGTTCCACACACTTGTCAAGAGCCAACTCTCCAACATCCTTTCGGACACTGACAGCAAGAAAGCTGTCAACAATATGGGCCAGGAGCTGGATGCCAACAAGGATGGGAAGGTTGGTTTTGAGGAGTACATGAAGCTGGTGGGCTACCTGGCGGTTTCACTCAGCGAACAGCGCACTCCCGCTAATCAAGAGCCGGCCACAAATGCTGCATCCGAGCCAGTGGCTCAGAGTGCCCCAGCCAGGGAGGAGGACAAATCAGAGGCTAAGGCGGAGGTGACCGAGGAGGCAGAAGCAGCCGCCGAACCGAAGGTAGACGCCAACGCAGAGCCAACGGTACAATTAAAGGTAGACGCCAAGGCCGAGCCAATGGTAGATTTGAAGGTGG                                                                                                                 ]
[+] EMBL BU807239             [AGCGCACGTTAGCACACTTCTCTCGTCCCTCAGACGCGTACGAGGAGTCATGGAGGCTGCCATTCAGACCCTGGTGAAGGTCTTCCTGAAATCGTCCAAAGGAAGGGAGAGCCTAGGAAAGAAAGAGTTCCACACACTTGTCAAGAGCCAACTCTCCAACATCCTTTCGGACACTGACAGCAAGAAAGCTGTCAACAATATGGGCCAGGAGCTGGATGCCAACAAGGATGGGAAGGTTGGTTTTGAGGAGTACATGAAGCTG                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL BU808413             [  CGCACGTTAGCACACTTCTCTCGTCCCTCAGACGCGTACGAGGAGTCATGGAGGCTGCCATTCAGACCCTGGTGAAGGTCTTCCTGAAATCGTCCAAAGGAAGGGAGAGCCTAGGAAAGAAAGAGTTCCACACACTTGTCAAGAGCCAACTCTCCAACATCCTTTCGGACACTGACAGCAAGAAAGCTGTCAACAATATGGGCCAGGAGCTGGATGCCAACAAGGATGGGAAGGTTGGTTTTGAGGAGTACATGAAGCTGGTGGGCTACCTGGCGGTTTCACTCAGCGAACAGCGCACTCCCGCTAATCAAGAGCCGGCCACAAATGCTGCATCCGAGCCAGTGGCTCAGAGTGCCCCAGCCAGGGAGGAGGACAAATCAGAGGCTAAGGCGGAGGTGACCGAGGAGGCAGAAGCAGCCGCCGAACCGAAGGTAGACGCCAACGNAGAGNCAACGGTACAATT                                                                                                                                                             ]
[+] EMBL CA846183             [    gcCTTTAGCACACTTCTCTCGTCCCTCAGACGCGTACGAGGAGTCATGGAGGCTGCCATTCAGACCCTGGTGAAGGTCTTCCTGAAATCGTCCAAAGGAAGGGAGAGCCTAGGAAAGAAAGAGTTCCACACACTTGTCAAGAGCCAACTCTCCAACATCCTTTCGGACACTGACAGCAAGAAAGCTGTCAACAATATGGGCCAGGAGCTGGATGCCAACAAGGATGGGAAGGTTGGTTTTGAGGAGTACATGAAGCTGGTGGGCTACCTGGCGGTTTCACTCAGCGAACAGCGCACTCCCGCTAATCAAGAGCCGGCCACAAATGCTGCATCCGAGCCAGTGGCTCAGAGTGCCCCAGCCAGGGAGGAGGACAAATCAGAGGCTAAGGCGGAGGTGACCGAGGAGGCAGAAGCAGCCGCCGAACCGAAGGTAGACGCCAACGCAGAGCCAACGGTACAATTAAAGGTAGACGCCAAGGCCGAGCCAATGGTAGATTTGAAGGTGGAAGCTAACGCCAGCCCAAAGGTAGAAGTCGATGCTGAAGGTGCCGCCAAGATCGTGGCAGCGGTCGCAGAGGAGGAGCCGGCGGCGGCATCGGGAGGAGAGGTGACGGCAGCG]
[+] EMBL BU808084             [          AGCACACTTCTCTCGTCCCTCAGACGCGTACGAGGAGTCATGGAGGCTGCCATTCAGACCCTGGTGAAGGTCTTCCTGAAATCGTCCAAAGGAAGGGAGAGCCTAGGAAAGAAAGAGTTCCACACACTTGTCAAGAGCCAACTCTCCAACATCCTTTCGGACACTGACAGCAAGAAAGCTGTCAACAATATGGGCCAGGAGCTGGATGCCAACAAGGATGGGAAGGTTGGTTTTGAGGAGTACATGAAGCTGGTGGGCTACCTGGCGGTTTCACTCAGCGAACAGCGCACTCCCGCTAATCAAGAGCCGGCCACAAATGCTGCATCCGAGCCAGTGGCTCAGAGTGCCCCAGCCAGGGAGGAGGACAAATCAGAGGCTAAGGCGGAGGTGACCGAGGAGGCAGAAGCAGCCGCCGAACCGAAGGTAGACGCCAACGCAGAGCCAACGGTACAATTAAAGGTAGACGCCAAGGCCGAGCCAATGGTAGATTTGAAGGTGGAAGCTAACGCCAGCCCAAAGGTAGAAGTCGA                                                                                  ]
[+] EMBL FR0061184            [                                    CGTACGAGGAGTCATGGAGGCTGCCATTCAGACCCTGGTGAAGGTCTTCCTGAAATCGTCCAAAGGAAGGGAGAGCCTAGGAAAGAAAGAGTTCCACACACTTGTCAAGAGCCAACTCTCCAACATCCTTTCGGACACTGACAGCAAGAAAGCTGTCAACAATATGGGCCAGGAGCTGGATGCCAACAAGGATGGGAAGGTTGGTTTTGAGGAGTACATGAAGCTGGTGGGCTACNNCTGCGGTTCACTCAGCGAACAGCGCACTCCCGCTAATCAAGAGCCGGCCA                                                                                                                                                                                                                                                                                                           ]
[+] EMBL FR0061651            [                                                            CATTCAGACCCTGGTGAAGGGCTTCCTGAAATCGTCCAAAGGAAGGGAGAGCCTAGGAAAGAAAGAGTTCCACACACTTGTCAAGAGCCAACTCTCCAACATCCTTTCGGACACTGACAGCAAGAAAGCTGTCAACAATATGGGCCAGGAGCTGGATGCCAACAAGGATGGGAAGGTTGGTTTTGAGGAGTACATGAAGCTGGTGGGCTACCTGGCGGTTTCACTCAGCGAACAGCGCACTCCCGCTAATCAAGAGCCGGCCACAAATGCTGCATCCGAGCCAGTGGCTCAGAGTGCCCCAGCCAGGGAGGAGGACA                                                                                                                                                                                                                                                     ]




>consensus_2621#1
AGCGCACGTTAGCACACTTCTCTCGTCCCTCAGACGCGTACGAGGAGTCATGGAGGCTGC
CATTCAGACCCTGGTGAAGGTCTTCCTGAAATCGTCCAAAGGAAGGGAGAGCCTAGGAAA
GAAAGAGTTCCACACACTTGTCAAGAGCCAACTCTCCAACATCCTTTCGGACACTGACAG
CAAGAAAGCTGTCAACAATATGGGCCAGGAGCTGGATGCCAACAAGGATGGGAAGGTTGG
TTTTGAGGAGTACATGAAGCTGGTGGGCTACCTGGCGGTTTCACTCAGCGAACAGCGCAC
TCCCGCTAATCAAGAGCCGGCCACAAATGCTGCATCCGAGCCAGTGGCTCAGAGTGCCCC
AGCCAGGGAGGAGGACAAATCAGAGGCTAAGGCGGAGGTGACCGAGGAGGCAGAAGCAGC
CGCCGAACCGAAGGTAGACGCCAACGCAGAGCCAACGGTACAATTAAAGGTAGACGCCAA
GGCCGAGCCAATGGTAGATTTGAAGGTGGAAGCTAACGCCAGCCCAAAGGTAGAAGTCGA
TGCTGAAGGTGCCGCCAAGATCGTGGCAGCGGTCGCAGAGGAGGAGCCGGCGGCGGCATC
GGGAGGAGAGGTGACGGCAGCG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_2621#0      -CCGCACGTTAGCACACTTCTCTCGTCCCTCAGACGCGTACGAGGAGTCATGGAGGCTGC 59
consensus_2621#1      AGCGCACGTTAGCACACTTCTCTCGTCCCTCAGACGCGTACGAGGAGTCATGGAGGCTGC 60
                        **********************************************************

consensus_2621#0      GCATTCAGACCCTGGTGAAGGTCTTCCTGAAATCGTCCAAAGGAAGGGAGAGCCTAGGAA 119
consensus_2621#1      -CATTCAGACCCTGGTGAAGGTCTTCCTGAAATCGTCCAAAGGAAGGGAGAGCCTAGGAA 119
                       ***********************************************************

consensus_2621#0      AGAAAGAGTTCCACACACTTGTCAAGAGCCAACTCTCCAACATCCTTTCGGACACTGACA 179
consensus_2621#1      AGAAAGAGTTCCACACACTTGTCAAGAGCCAACTCTCCAACATCCTTTCGGACACTGACA 179
                      ************************************************************

consensus_2621#0      GCAAGAAAGCTGTCAACAATATGGGCCAGGAGCTGGATGCCAACAAGGATGGGAAGGTTG 239
consensus_2621#1      GCAAGAAAGCTGTCAACAATATGGGCCAGGAGCTGGATGCCAACAAGGATGGGAAGGTTG 239
                      ************************************************************

consensus_2621#0      GTTTTGAGGAGTACATGAAGCTGGTGGGCTACCTGGCGGNTTCACTCAGCGAACAGCGCA 299
consensus_2621#1      GTTTTGAGGAGTACATGAAGCTGGTGGGCTACCTGGCGGTTTCACTCAGCGAACAGCGCA 299
                      *************************************** ********************

consensus_2621#0      CTCCCGCTAATCAAGAGCCGGCCACGAATGCTGCATCCGAGCCAGTGGCTCAGAGTGCCC 359
consensus_2621#1      CTCCCGCTAATCAAGAGCCGGCCACAAATGCTGCATCCGAGCCAGTGGCTCAGAGTGCCC 359
                      ************************* **********************************

consensus_2621#0      CAGCCAGGGAGGAGGACAAATCAGAGGCTAAGGCGGAGGTGACCGAGGAGGCAGAAGCAG 419
consensus_2621#1      CAGCCAGGGAGGAGGACAAATCAGAGGCTAAGGCGGAGGTGACCGAGGAGGCAGAAGCAG 419
                      ************************************************************

consensus_2621#0      CCGCCGAACCGAAGGTAGAAGTCGATGCTGAAGGTGCCGCCAAGTTCGTGGCAGCGGTCG 479
consensus_2621#1      CCGCCGAACCGAAGGTAGACGCCAACGCAGAGCCAACGGTACAATTAAAGGTAGA---CG 476
                      ******************* * * * ** **     * *   * **   ** **    **

consensus_2621#0      CAGAGGAGGAAGCGGCCGCGGCTGTAGAGGAAGCGGAGAAGAAGACGGAAGAGGCGACCT 539
consensus_2621#1      CCAAGGCCGAGCCAATGGTAGATTTGAAGGTGGAAGCTAACGCCAGCCCAAAGG------ 530
                      *  ***  **  *    *  * * *  ***  *  *  **    *    * ***      

consensus_2621#0      CGTAGGGGACAATCCATTCATTCCCAACCAAATCCGACGCGTACATCCCACACTACGGAT 599
consensus_2621#1      --TAGAAGTCGATGCTGAAGGTGCCG-CCAAGATCGTGGCAGCGGTCGCAGAGGAGGAGC 587
                        ***  * * ** *      * **  ****   **  **     ** ** *  * *   

consensus_2621#0      CA-CATTACTCTCAAAGTTTCATGCCACTAAACCTTTTTTTTTTAAATGCAAACAACATT 658
consensus_2621#1      CGGCGGCGGCATCGGGAGGAGAGGTGACGGCAGCG------------------------- 622
                      *  *       **        * *  **   * *                          

consensus_2621#0      GACAACACTTT 669
consensus_2621#1      -----------


Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner    (hubert.wassner@noos.fr)