Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Takifugu rubripes
cluster # 2702 cluster # 2702       Sequences # 13       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2702#0 length = 646 sequences # 13  
consensusID : consensus_2702#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 13
consensus length = 646
fasta sequence 
                              [GCACGAGGGCGGACCAGGGTGAGAAGAAGGAGAACCCCA-TGAGAGAGCTTCGCATTCGCAAGCTCTGCCTTAACATCTGCGTTGGTGAAAGCGGTGACAGACTGACCCGTGCTGCTAAGGTGCTGGAGCAGCTCACAGGACAGACACCCGTGTTTTCTAAGGCCCGTTACACTGTACGATCCTTCGGTATCCGCAGAAATGAAAA-GATTGCTGTCCATTGCACTGTCCGTGGAGCCAAAGCAGAGGAAATCCTGGAGAAAGGACTTAAGGTGCGTGAGTATGAGTTGAGAAAGAACAACTTCTCAGACACCGGGAACTTTGGTTTTGGTATCCAGGAGCACATCGATCTGGGCATCAAGTATGACCCCAGCATCGGTATCTACGGTCTGGACTTCTATGTGGTTCTGGGCAGACCCGGTTTCAGCATCACTGACAAGAAGCGGAAGACAGGCCGCATC-GGTTTTAGGCACCGAATCCGCAAAGAGGAGGCCATGCGCTGGTTTCAGCAGAAGTATGATGGAATTATCCTCCCTGGCAAGTAAAGGACCACCTTTTCATCTTGTTTGTAACAAATAAAAAAATATTGGGGAATAAAAAAAAAAAAAAAAAAAACCCCGGGGGGGGGCCCGGAACCAAGCTTTGGTCC]

[+] EMBL CA341058             [GCACGAGGGCGGACCAGGGTGAGAAGAAGGAGAACCCCA TGAGAGAGCTTCGCATTCGCAAGCTCTGCCTTAACATCTGCGTTGGTGAAAGCGGTGACAGACTGACCCGTGCTGCTAAGGTGCTGGAGCAGCTCACAGGACAGACACCCGTGTTTTCTAAGGCCCGTTACACTGTACGATCCTTCGGTATCCGCAGAAATGAAAA GATTGCTGTCCATTGCACTGTCCGTGGAGCCAAAGCAGAGGAAATCCTGGAGAAAGGACTTAAGGTGCGTGAGTATGAGTTGAGAAAGAACAACTTCTCAGACACCGGGAACTTTGGTTTTGGTATCCAGGAGCACATCGATCTGGGCATCAAGTATGACCCCAGCATCGGTATCTACGGTCTGGACTTCTATGTGGTTCTGGGCAGACCCGGTTTCAGCATCACTGACAAGAAGCGGAAGACAGGCCGCATC GGTTTTAGGCACCGAATCCGCAAAGAGGAGGCCATGCGCTGGTTTCAGCAGAAGTATGATGGAATTATCCTCCCTGGCAAGTAAAGGACCACCTTTTCATCTTGTTTGTAACAAATAAAAAAATATTGGGGAATA                                                     ]
[+] EMBL CA844482             [                       AAGAAGGAGAACCCCA TGAGAGAGCTTCGCATTCGCACGTTCTGCCTTAACATCTGCGTTGGTGAAAGCGGTGACAGACTGACCCGTGCTGCTAAGGTGCTGGAGCAGCTCACAGGACAGACACCCGTGTTTTCTAAGGCCCGTTACACTGTACGATCCTTCGGTATCCGCAGAAATGAAAA GATTGCTGTCCATTGCACTGTCCGTGGAGCCAAAGCAGAGGAAATCCTGGAGAAAGGACTTAAGGTGCGTGAGTATGAGTTGAGAAAGAACAACTTCTCAGACACCGGGAACTTTGGTTTTGGTATCCAGGAGCACATCGATCTGGGCATCAAGTATGACCCCAGCATCGGTATCTACGGTCTGGACTTCTATGTGGTTCTGGGCAGACCCGGTTTCAGCATCACTGACAAGAAGCGGAAGACAGGCCGCATC GGTTTTAGGCACCGAATCCGCAAAGAGGA                                                                                                                                                               ]
[+] EMBL FR0055150            [                              gGACCCCCATTGAGAGAGCTTCGCATTCGCAAGCTCTGCCTTAACATCTGCGTTGGTGAAAGCGGTGACAGACTGACCCGTGCTGCTAAGGTGCTGGAGCAGCTCACAGGACAGACACCCGTGTTTTCTAAGGCCCGTTACACTGTACGATCCTTCGGTATCCGCAGAAATGAAAA GATTGCTGTCCATTGCACTGTCCGTGGAGCCAAAGCAGAGGAAATCCTGGAGAAAGGACTTAAGGTGCGTGAGTATGAGTTGAGAAAGAACAACTTCTCAGACACCGGGAACTTTGGTTTTGGTATCCAGGAGCACATCGATCTGGGCATCAAGTATGACCCCAGCATCGGTATCTACGGTCTGGACTTCTATGTGGTTCTGGGCAGACCCGGTTTCAGCATCACTGACAAGAAGCGGGAGACAGGGCGCATC GGTTTTAGGCACCGAATCCGCAA                                                                                                                                                                     ]
[+] EMBL CA846787             [                                               GCTTCGCATTCGCAAGCTCTGCCTTAA TTCTCCGTTGGTGAAAGCGGTGACAGACTGACCCGTGCTGCTAAGGTGCTGGAGCAGCTCACAGGACAGACACCCGTGTTTTCTAAGGCCCGTTACACTGTACGATCCTTCGGTATCCGCAGAAATGAAAA GATTGCTGTCCATTGCACTGTCCGTGGAGCCAAAGCAGAGGAAATCCTGGAGAAAGGACTTAAGGTGCGTGATTACTATTTGAGAAAGAACAACTTCTCAGACACCGGGAACTTTGGTTTTGGTATCCAGGAGCACATCGATCTGGGCATCAAGTATGACCCCAGCATCGGTATCTACGGTCTGGACTTCTATGTGGTTCTGGGCAGACCCGGTTTCAGCATCACTGACAAGAAGCGGAAGACAGGCCGCATC GGTTTTAGGCACCGAATCCGCAAAGAGGAGGCCATGCGCTGGTTTCAGCAGAAGTATGATGGAATTATCCTCCCTGGCAAGTAAAGGACCACCTT                                                                                             ]
[+] EMBL FR0055846            [                                               GCATCGCATTCGCAAGCTCTGCCTTAACATCTGCGTTGGTGAAAGCGGTGACAGACTGACCCGTGCTGCTAAGGTGCTGGAGCAGCTCACAGGACAGACACCCGTGTTTTCTAAGGCCCGTTACACTGTACGATCCTTCGGTATCCGCAGAAATGAAAA GATTGCTGTCCATTGCACTGTCCGTGGAGCCAAAGCAGAGGAAATCCTGGAGAAAGGACTTAAGGTGCGTGAGTATGAGTTGAGAAAGAACAACTTCTCAGACACCGGGAACTTTGGTTTTGGTATCCAGGAGCACATCGATCTGGGCATCAAGTATGACCCCAGCATCGGTATCTACGGTCTGGACTTCTATGTGGTTCTGGGCAGACCCGGTTTCAGCATCACTGACAAGAAGCGGAAGACAGGCCGCATC GGTTTTAGGCACCGAATCCGCAAAGAGGAGGGCATGCGCTGGTTTCAGCAGAAGTATGATGGAATTTTCCTCCCTGGCAAGT                                                                                                          ]
[+] EMBL FR0056071            [                                                    GCATTCGCAAGCTCTGCCTTAACATCTGCGTTGGTGAAAGCGGTGACAGACTGACCCGTGCTGCTAAGGTGCTGGAGCAGCTCACAGGACAGACACCCGTGTTTTCTAAGGCCCGTTACACTGTACGATCCTTCGGTATCCGCAGAAATGAAAA GATTGCTGTCCATTGCACTGTCCGTGGAGCCAAAGCAGAGGAAATCCTGGAGAAAGGACTTAAGGTGCGTGAGTATGAGTTGAGAAAGAACAACTTCTCAGACACCGGGAACTTTGGTTTTGGTATCCAGGAGCACATCGATCTGGGCATCAAGTATGACCCCAGCATCGGTATCTACGGTCTGGACTTCTATGTGGTTCTGGGCAGACCCGGTTTCAGCATCACTGACAAGAAGCGGTAGACAGGCCGCATCGGGTTTTAGGg                                                                                                                                                                                  ]
[+] EMBL FR0055795            [                                                       TTCGCAAGCTCTGCCTTAACATCTGCGTTGGTGAAAGCGGTGACAGACTGACCCGTGCTGCTAAGGTGCTGGAGCAGCTCACAGGACAGACACCCGTGTTTTCTAAGGCCCGTTACACTGTACGATCCTTCGGTATCCGCAGAAATGAAAA GATTGCTGTCCATTGCACTGTCCGTGGAGCCAAAGCAGAGGAAATCCTGGAGAAAGGACTTAAGGTGCGTGAGTATGAGTTGAGAAAGAACAACTTCTCAGACACCGGGAACTTTGGTTTTGGTATCCAGGAGCACATCGATCTGGGCATCAAGTATGACCCCAGCATCGGTATCTACGGTCTGGACTTCTATGTGGTTCTGGGCAGACCCGGTTTCAGCATCACTGACAAGAAGCGGAAGACAGGCCGCATC GGTTTTAGGCACCGAATCCGCANA                                                                                                                                                                    ]
[+] EMBL FR0056802            [                                                            AAGCTCTGCCTTAACATCTGCGTTGGTGAAAGCGGTGACAGACTGACCCGTGCTGCTAAGGTGCTGGAGCAGCTCACAGGACAGACACCCGTGTTTTCTAAGGCCCGTTACACTGTACGATCCTTCGGTATCCGCAGAAATGAAAA GATTGCTGTCCATTGCACTGTCCGTGGAGCCAAAGCAGAGGAAATCCTGGAGAAAGGACTTAAGGTGCGTGAGTATGAGTTGAGAAAGAACAACTTCTCAGACACCGGGAACTTTGGTTTTGGTATCCAGGAGCACATCGATCTGGGCATCAAGTATGACCCCAGCATCGGTATCTACGGTCTGGACTTCTATGTGGTTCTGGGCAGACCCGGTTTCAGCATCACTGACAAGAAGCGGGAGACAGGCgca                                                                                                                                                                                                ]
[+] EMBL FR0055797            [                                                             AGCTCTGCCTTAACATCTGCGTTGGTGAAAGCGGTGACAGACTGACCCGTGCTGCTAAGGTGCTGGAGCAGCTCACAGGACAGACACCCGTGTTTTCTAAGGCCCGTTACACTGTACGATCCTTCGGTATCCGCAGAAATGAAAA GATTGCTGTCCATTGCACTGTCCGTGGAGCCAAAGCAGAGGAAATCCTGGAGAAAGGACTTAAGGTGCGTGAGTATGAGTTGAGAAAGAACAACTTCTCAGACACCGGGAACTTTGGTTTTGGTATCCAGGAGCACATCGATCTGGGCATCAAGTATGACCCCAGCATCGGTATCTACGGTCTGGACTTCTATGTGGTTCTGGGCAGACCCGGTTTCAGCATCACTGACAAGAAGCGGNAGACAGGCCGCATC GGTTTTAGGCACCGAATCCGCAAAGAGGAGGGCATGCCCTGGTTT                                                                                                                                               ]
[+] EMBL FR0057406            [                                                                                 GTTGGTGAAAGCGGTGACAGACTGACCCGTGCTGCTAAGGTGCTGGAGCAGCTCACAGGACAGACACCCGTGTTTTCTAAGGCCCGTTACACTGTACGATCCTTCGGTATCCGCAGAAATGAAAAGGATTGCTGTCCATTGCACTGTCCGTGGAGCCAAAGCAGAGGAAATCCTGGAGAAAGGACTTAAGGTGCCTGAGTATGAGTTGAGAAATAACAACTTCTCAGACACCGGGAACTTTGGTTTTGGTAGCCAGGAGCAGATCGATCTGGGCATCAAGTAGTGCCCCAGCATCGGTATCTACGGT                                                                                                                                                                                                                                                                     ]
[+] EMBL FR0057404            [                                                                                  TTGGTGAAAGCGGTGACAGACTGACCCGTGCTGCTAAGGTGCTGGAGCAGCTCACAGGACAGACACCCGTGTTTTCTAAGGCCCGTTACACTGTACGATCCTTCGGTATCCGCAGAAATGAAAA GATTGCTGTCCATTGCACTGTCCGTGGAGCCAAAGCAGAGGAAATCCTGGAGAAAGGACTTAAGGTGCGTGAGTATGAGTTGAGAAAGAACAACTTCTCAGACACCGGGAACTTTGGTTTTGGTATCCAGGAGCACATCGATCTGGGCATCAAGTATGACCCCAGCATCGGTATCTACGGTCTGGACTTCTATGTGGTTCTGGGCAGACCCGGTTTCAGCATCACTGACAAGAAGCGGGAGACAGGCCGCATC GGTTTTAGGCACCGAATCCGCA                                                                                                                                                                      ]
[+] EMBL FR0056101            [                                                                                                                                                                                                                                                                                                                                                                                                                        GGGCAGACCCGGTTTCAGCATCACTGACAAGAAGCGGAAGACAGGCCGCATC GGTTTTAGGCACCGAATCCGCAAAGAGGAGGCCATGCGCTGGTTTCAGCAGAAGTATGATGGAATTATCCTCCCTGGCAAGTAAAGGACCACCTTTTCATCTTGTTTGTAACAAATAAAAAAATATTGGGGAATAAAAAAAAAAAAAAAAAAAACCCCGGGGGGGGGCCCGGTACCAAGTTTTGGTCC]
[+] EMBL FR0056630            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        GGCAAGTAAAGGACCACCTTTTCATCTTGTTTGTAACAAATAAAAAAATATTGGGGAATAAAAAAAAAAAAAAAAAA   CCCAAGGGGGGGCCCGGAACCAAGCTTT     ]




>consensus_2702#0
GCACGAGGGCGGACCAGGGTGAGAAGAAGGAGAACCCCATGAGAGAGCTTCGCATTCGCA
AGCTCTGCCTTAACATCTGCGTTGGTGAAAGCGGTGACAGACTGACCCGTGCTGCTAAGG
TGCTGGAGCAGCTCACAGGACAGACACCCGTGTTTTCTAAGGCCCGTTACACTGTACGAT
CCTTCGGTATCCGCAGAAATGAAAAGATTGCTGTCCATTGCACTGTCCGTGGAGCCAAAG
CAGAGGAAATCCTGGAGAAAGGACTTAAGGTGCGTGAGTATGAGTTGAGAAAGAACAACT
TCTCAGACACCGGGAACTTTGGTTTTGGTATCCAGGAGCACATCGATCTGGGCATCAAGT
ATGACCCCAGCATCGGTATCTACGGTCTGGACTTCTATGTGGTTCTGGGCAGACCCGGTT
TCAGCATCACTGACAAGAAGCGGAAGACAGGCCGCATCGGTTTTAGGCACCGAATCCGCA
AAGAGGAGGCCATGCGCTGGTTTCAGCAGAAGTATGATGGAATTATCCTCCCTGGCAAGT
AAAGGACCACCTTTTCATCTTGTTTGTAACAAATAAAAAAATATTGGGGAATAAAAAAAA
AAAAAAAAAAAACCCCGGGGGGGGGCCCGGAACCAAGCTTTGGTCC

clustalw multiple alignements is not computed in this case
Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner    (hubert.wassner@noos.fr)