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These datas are free for academic use only, please contact me for any other use. Takifugu rubripes see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2749#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 15 consensus length = 658 fasta sequence
[AGTGCAGTTGCGGATCACCACCAGGAATCGCCGACAAGCCGATAATCCTCCCTTTTAAGCGGGACGCAGCGAAAGGTCCCAGTATCCACGCACCATGGCAGACAGAGAAAACCTCGTGTACCAGGCTAAACTGGCCGAGCAGGCGGAAAGATATGACGAAATGGTGGAGTCGATGAAGAAGGTGGCGGGTTTGGACAAGGAGCTGACCATGGAAGAGAGGAACCTGCTGTCGGTTGCCTACAAGAACGTCATCGGAGCTCGACGAGCTTCTTGGAGGATAATTAGCA-GCCTGGAGCAGAAAGAAGAAGGCAAAGCTGCAGAGGAGAAGATGAAAATGATCAAGGAGTACAGGAAAGTGATTGAAAACGAGCTGAAAACGATCTGCAACGATATTCTGGTTGTACTGGACAAGCACCTGATCCCCACTGCATTAATGGGAGAATCCAAGGTTTTCTACTACAAGATGAAGGGAGATTACCACAGGTACCTGGCAGAGTTTGCTACAGGAAACGACAGGAAGGAGGCGGCGGAGAACAGTCTGATGGCGTACAAAGCTGCTAACGACATCGCCCAGAGCGAGCTCACTTCCACACACCCCATCCGTCTGGGATTGGCCCTCAACTTTTCAGTCTTCTACTACGAAATCCTAAACTCGGCG]
[+] EMBL CA332871 [AGTGCAGTTGCGGATCACCACCAGGAATCGCCGACAAGCCGATAATCCTCCCTTTTAAGCGGGACGCAGCGAAAGGTCCCAGTATCCACGCACCATGGCAGACAGAGAAAACCTCGTGTACCAGGCTAAACTGGCCGAGCAGGCGGAAAGATATGACGAAATGGTGGAGTCGATGAAGAAGGTGGCGGGTTTGGACAAGGAGCTGACCATGGAAGAGAGGAACCTGCTGTCGGTTGCCTACAATATTGTCATCGGAGCTCGACGAGCTTCTTGGAGGATAATTAGCA GCCTGGAGCACAAAGAAGAAGGCAAAGCTGCAGAGGAGAAGATGAAAATGATCAAGGAGTACAGGAAAGTGATTGAAAACGAGCTGAAAACGATCTGCAACGATATTCTGGTTGTACTGGACCAGCACCTGATCCCCACTGCATTAATGGGAGAATCCAAGGTTTTCTAC ]
[+] EMBL BU808198 [AGTGCAGTTGCGGATCACCACCAGGAATCGCCGACAAGCCGATAATCCTCCCTTTTAAGCGGGACGCAGCGAAAGGTCCCAGTATCCACGCACCATGGCAGACAGAGAAAACCTCGTGTACCAGGCTAAACTGGCCGAGCAGGCGGAAAGATATGACGAAATGGTGGAGTCGATGAAGAAGGTGGCGGGTTTGGACAAGGAGCTGACCATGGAAGAGAGGAACCTGCTGTCGGTTGCCTACAAGAACGTCATCGGAGCTCGACGAGCTTCTTGGAGGATAATTAGCA GCCTGGAGCAGAAAGAAGAAGGCAAAGCTGCAGAGGAGAAGATGAAAATGATCAAGGAGTACAGGAAAGTGATTGAAAACGAGCTGAAAACGATCTGCAACGATATTCTGGTTGTACTGGACAAGCACCTGATCCCCACTGCATTAATGGGAGAGTCCAAGGTTTTCTACTACAAGATGAAGGGAGATTACCACAGGTACCTGGCAGAGTTTGCTACAGGAAACGACAGGAAGGAGGCGGCGGAGAACAGTCTGATGGCGTACAAAGCTGCTAACGACATCGCCCAGAGCGAGCTCACTTTCACACACCCCATCCGTCTGGGATTGGCCCTCAACTTTTCAGTC ]
[+] EMBL CA846045 [ACTGTAGTTGCGGATCACCACCAGGAATCGCCGACAAGCCGATACTTCTCCCTTTTAAGCGGGACGCAGCGAAAGGTCCCAGTATCCACGCACCATGGCAGACAGAGAAAACCTCGTGTACCAGGCTAAACTGGCCGAGCAGGCGGAAAGATATGACGAAATGGTGGAGCCGATGAAGAAGGTGGCGGGTTTGGACAAGGAGCTGACCATGGAAGAGAGGAACCTGCTGTCGGTTGCCTACAAGAACGTCATCGGAGCTCGACGAGCTTCTTGGAGGATAATTAGCA GCCTGGAGCAGAAAGAAGAAGGCAAAGCT ]
[+] EMBL BU808185 [ tCTGGAGCGGATCACCACCAGGAATCGCCGACAAGCCGATAATCCTCCCTTTTAAGCGGGACGCAGCGAAAGGTCCCAGTATCCACGCACCATGGCAGACAGAGAAAACCTCGTGTACCAGGCTAAACTGGCCGAGCAGGCGGAAAGATATGACGAAATGGTGGAGTCGATGAAGAAGGTGGCGGGTTTGGACAAGGAGCTGACCATGGAAGAGAGGAACCTGCTGTCGGTTGCCTACAAGAACGTCATCGGAGCTCGACGAGCTTCTTGGAGGATAATTAGCA GCCTGGAGCAGAAAGAAGAAGGCAAAGCTGCAGAGGAGAAGATGAAAATGATCAAGGAGTACAGGAAAGTGATTGAAAACGAGCTGAAAACGATCTGCAACGATATTCTGGTTGTACTGGACAAGCACCTGATCCCCACTGCATTAATGGGAGAGTCCAAGGTTTTCTACTACAAGATGAAGGGAGATTACCACAGGTACCTGGCAGAGTTTGCTACAGGAAACGACAGGAAGGAGGCGGCGGAGAACAGTCTGATGGCGTACAAAGCTGCTAACGACATCGCCCAGAGCGAGCTCACTTCCACACACCCCATCCGTCTGGGATTGGCCCTCAACTTTTCAGg ]
[+] EMBL BU804633 [ AGTTGCGGATCACCACCAGGAATCGCCGACAAGCCGATAATCCTCCCTTTTAAGCGGGACGCAGCGAAAGGTCCCAGTATCCACGCACCATGGCAGACAGAGAAAACCTCGTGTACCAGGCTAAACTGGCCGAGCAGGCGGAAAGATATGACGAAATGGTGGAGTCGATGAAGAAGGTGGCGGGTTTGGACAAGGAGCTGACCATGGAAGAGAGGAACCTGCTGTCGGTTGCCTACAAGAACGTCATCGGAGCTCGACGAGCTTCTTGGAGGATAATTAGCA GCCTGGAGCAGAAAGAAGAAGGCAAAGCTGCAGAGGAGAAGATGAAAATGATCAAGGAGTACAGGAAAGTGATTGAAAACGAGCTGAAAACGATCTGCAACGATATTCTGGTTGTACTGGACAAGCACCTGATCCCCACTGCATTAATGGGAGAATCCAAGGTTTT ]
[+] EMBL CA333199 [ TGCGGATCACCACCAGGAATCGCCGACAAGCCGATAATCCTCCCTTTTAAGCGGGACGCAGCGAAAGGTCCCAGTATCCACGCACCATGGCAGACAGAGAAAACCTCGTGTACCAGGCTAAACTGGCCGAGCAGGCGGAAAGATATGACGAAATGGTGGAGTCGATGAAGAAGGTGGCGGGTTTGGACAAGGAGCTGACCATGGAAGAGAGGAACCTGCTGTCGGTTGCCTACAAGAACGTCATCGGAGCTCGACGAGCTTCTTGGAGGATAATTAGCA GCCTGGAGCAGAAAGAAGAAGGCAAAGCTGCAGAGGAGAAGATGAAAATGATCAAGGAGTACAGGAAAGTGATTGAAAACGAGCTGAAAACGATCTGCAACGATATTCTGGTTGTACTGGACAAGCACCTGATCCCCACTGCATTAATGGGAGAGTCCAAGGTTTTCTACTACAAGATGAAGGGAGATTACCACAGGTACCTGGCAGAGTTTGCTACAGGAAACGACAGGAAGGAGGCGGCGGAGAACAGTCTGATGGCGTACAAAGCTGCTAACGACATCGCCCAGAGCGAGCTCACTTCCACACACCCCATCCGTCTGGGATTGGCCCTCAACTT ]
[+] EMBL BU807150 [ CCAGGAATCGCCGACAAGCCGATAATCCTCCCTTTTAAGCGGGACGCAGCGAAAGGTCCCAGTATCCACGCACCATGGCAGACAGAGAAAACCTCGTGTACCAGGCTAAACTGGCCGAGCAGGCGGAAAGATATGACGAAATGGTGGAGTCGATGAAGAAGGTGGCGGGTTTGGACAAGGAGCTGACCATGGAAGAGAGGAACCTGCTGTCGGTTGCCTACAAGAACGTCATCGGAGCTCGACGAGCTTCTTGGAGGATAATTAGCA GCCTGGAGCAGAAAGAAGAAGGCAAAGCTGCAGAGGAGAAGATGAAAATGATCAAGGAGTACAGGAAAGTGATTGAAAACGAGCTGAAAACGATCTGCAACGATATTCTGGTTGTACTGGACAAGCACCTGATCCCCACTGCATTAATGGGAGAATCCAAGGTTTTCTACTACAAGATGAAGGGAGATT ]
[+] EMBL BU808572 [ GGAATCGCCGACAAGCCGATAATCCTCCCTTTTAAGCGGGACGCAGCGAAAGGTCCCAGTATCCACGCACCATGGCAGACAGAGAAAACCTCGTGTACCAGGCTAAACTGGCCGAGCAGGCGGAAAGATATGACGAAATGGTGGAGTCGATGAAGAAGGTGGCGGGTTTGGACAAGGAGCTGACCATGGAAGAGAGGAACCTGCTGTCGGTTGCCTACAAGAACGCCATCGGAGCTCGACGAGCTTCTTGGAGGATAATTAGCA GCCTGGAGCAGAAAGAAGAAGGCAAAGCTGCAGAGGAGAAGATGAAAATGATCAAGGAGTACAGGAAAGTGATTGAAAACGAGCTGAAAACGATCTGCAACGATATTCTGGTTGTACTGGACAAGCACCTGATCCCCACTGCATTAATGGGAGAATCCAAGGTTTTCTACTACAAGATGAAGGGAGATTACCACAGGTACCTGGCAGAGTTTGCTACAGGAAACGACAGGAAGGAGACGGCGGAGAACAGTCTGATGGCGTACAAAGCTGCTAACGACATCGCCCAGAGCGAGCTCACTTCCACACACCCCATCCGTCTGGGATTGGCCCTCAACTTTTCAGTCTTCTACTACGAAATCCTAAACTCGGCG]
[+] EMBL BU807830 [ ATCACCGACAAGCCGATAATCCTCCCTTTTAAGCGGGACGCAGCGAAAGGTCCCAGTATCCACGCACCATGGCAGACAGAGAAAACCTCGTGTACCAGGCTAAACTGGCCGAGCAGGCGGAAAGATATGACGAAATGGTGGAGTCGATGAAGAAGGTGGCGGGTTTGGACAAGGAGCTGACCATGGAAGAGAGGAACCTGCTGTCGGTTGCCTACAAGAACGTCATCGGAGCTCGACGAGCTTCTTGGAGGATAATTAGCA GCCTGGAGCAGAAAGAAGAAGGCAAAGCTGCAGAGGAGAAGATGAAAATGATCAAGGAGTACAGGAAAGTGATTGAAAACGAGCTGAAAACGATCTGCAACGATATTCTGGTTGTACTGGACAAGCACCTGATCCCCACTGCATTAATGGGAGAGTCCAAGGTTTTCTACTACAAGATGAAGGGAGATTACCACAGGTACCTGGCAGAGTTTGCTACAGGAAACGACAGGAAGGAGGCGGCGGAGAACAGTCTGATGGCGTACAAAGCTGCTAACGACATCGCCCAGAGCGAGCTCACTTCCACACACCCCATCCGTCTGGGATTGGCCCTCAACTTTTCAGTCTTCTACTACGAAATCCTAAACTCG ]
[+] EMBL FR0061719 [ AGCGAAAGGTCCCAGTATCCACGCACCATGGCAGACAGAGAAAACCTCGTGTACCAGGCTAAACTGGCCGAGCAGGCGGAAAGATATGACGAAATGGTGGAGTCGATGAAGAAGGTGGCGGGTTTGGACAAGGAGCTGACCATGGAAGAGAGGAACCTGCTGTCGGTTGCCTACAAGAACGTCATCGGAGCTCGACGAGCTTCTTGGAGGATAATTAGCA GCCTGGAGCAGAAAGAAGAAGGCAAAGCTGCAGAGGAGAAGATGAAAATGATCAAGGAGTACAGGAAAGTGATTGAAAACGAGCTGAAAACGATCTGCAACGATATTCTGGTTGTACTGGACAAGCACCTGATCCCCACTGCATTAATGGGAGAGTCCAAGGTTTTCTACTACAAGAGGAAGGGAGATTACCACAGGTACCTGGCAGAATTTGCTACAGGAAACGAC ]
[+] EMBL FR0061924 [ GCGAAAGGTCCCAGTATCCACGCACCATGGCGGACAGAGAAAACCTCGTGTACCAGGCTAAACTGGCCGAGCAGGCGGAAAGATATGACGAAATGGTGGAGTCGATGAAGAAGGTGGCGGGTTTGGACAAGGAGCTGACCATGGAAGAGAGGAACCTGCTGTCGGTTGCCTACAAGAACGTCATCGGAGCTCGACGAGCTTCTTGGAGGATAATTAGCA GCCTGGAGCAGAAAGAAGAAGGCAAAGCTGCAGAGGAGAAGATGAAAATGATCAAGGAGTACAGGAAAGTGATTGAAAACGAGCTGAAAACGATCTGCAACGATATTCTGGTTGTACTGGACAAGCAC ]
[+] EMBL FR0061933 [ CGCACCATGTTAGACAGAGAAAACCTCGTGTACCAGGCTAAACTGGCCGAGCAGGCGCAAAGATATGACGAAATGGTGGAGTCGATGAAGAAGGTGGCGGGTTTGGACAAGGAGCTGACCATGGAAGAGAGGAACCTGCTGTCGGTTGCCTACAAGAACGTCATCGGAGCTCGACGAGCTTCTTGGAGGATAATTAGCA GCCTGGAGCAGAAAGAAGAAGGCAAAGCTGCAGAGGAGAAGATGAAAATGATCAAGGAGTACAGGAAAGTGATTGAAAACGAGCTTGTAACGATCTGCAACGGTATTCTGGTTGGACTGGACAAGCACCTGACCCCCACTGCTTTAATGGGAGAATCC ]
[+] EMBL BU808428 [ GCACCATGGCAGACAGAGAAAACCTCGTGTACCAGGCTAAACTGGCCGAGCAGGCGGAAAGATATGACGAAATGGTGGAGTCGATGAAGAAGGTGGCGGGTTTGGACAAGGAGCTGACCATGGAAGAGAGGAACCTGCTGTCGGTTGCCTACAAGAACGTCATCGGAGCTCGACGAGCTTCTTGGAGGATAATTAGCA GCCTGGAGCAGAAAGAAGAAGGCAAAGCTTTAGAGGAGAAGATGAAAATGATCAAGGAGTACAGGAAAGTGATTGAAAACGAGCTGAAAACGATCTGCAACGATATTCTGGTTGTACTGGACAAGCACCTGATCCCCACTGCATTAATGGGAGAATCCAAGGTTTTCTACTACAAGATGAAGGGAGATTACCACAGGTACCTGGCAGAGTTTGCTACAGGAAACGACAGGAAGGAGGCGGCGGAG ]
[+] EMBL BU807435 [ GCACCATGGCAGACAGAGAAAACCTCGTGTACCAGGCTAAACTGGCCGAGCAGGCGGAAAGATATGACGAAATGGTGGAGTCGATGAAGAAGGTGGCGGGTTTGGACAAGGAGCTGACCATGGAAGAGAGGAACCTGCTGTCGGTTGCCTACAAGAACGTCATCGGAGCTCGACGAGCTTCTTGGAGGATAATTAGCATTCTTGGAGCAGAAAGAAGAAGGCAAAGCTGCAGAGGAGAAGATGAAAATGATCAAGGAGTACAGGAAAGTGATTGAAAACGAGCTGAAAACGATCTGCAACGATATTCTGGTTGTACTGGACAAGCACCTGATCCCCACTGCATTAATGGGAGAATCCAAGGTTTTCTACTACAAGATGAAGGGAGATTACCACAGGTACCTGGCAGAGTTTGCTACAGGAAACGACAGGAAGGAGGCGGCGGAGAACAGTCTGATGGCGTACAAAGCTGCTAACGACATCGCCCAGAGCGAGCTCACTTCCACACACCCCATCCGTCTGGGATTGGCCCTCAACTTTTCAGTCTTCTACTACGAAATCCTAAACTCGc ]
[+] EMBL FR0062155 [ GTTTGGACAAGGAGCTGACCATGGAAGAGAGGAACCTGCTGTCGGGTGCCTACAAGAACGTCATCGGAGCTCGACGAGCTTCTTGGAGGATAATTAGCA GCCTGGAGCAGAAAGAAGAAGGCAAAGCTGCAGAGGAGAAGATGAAAATGATCAAGGAGTACAGGAAAGTGATTGAAAACGAGCTGGAAACGATCTGCAACGATATTCTGGGTGGACTGGACAAGCACCTGAATCCCACTGGATTAATGGGAGAGTTCAAGGGT ]
consensusID : consensus_2749#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 235 fasta sequence
[CCACGCACCATGGCAGACAGAGAAAATTCTTGTACCAGGCTAAACTGGCCGAGCAGGCGGAAAGATATGACGAAATGGTGGAGTCGATGAAGAAGGTGGCGGGTTTGGACAAGGAGCTGACCATGGAAGAGAGGAACCTGCTGGCGGTTGCTACAAGAACGTCATCGGAGCTCGACGAGCTTCTTGGAGGGATAATTAGCAGCCTCCACCAGAGTACCTGCGCTGAGGGGCCCCC]
[+] EMBL FR0060540 [CCACGCACCATGGCAGACAGAGAAAATTCTTGTACCAGGCTAAACTGGCCGAGCAGGCGGAAAGATATGACGAAATGGTGGAGTCGATGAAGAAGGTGGCGGGTTTGGACAAGGAGCTGACCATGGAAGAGAGGAACCTGCTGGCGGTTGCTACAAGAACGTCATCGGAGCTCGACGAGCTTCTTGGAGGGATAATTAGCAGCCTCCACCAGAGTACCTGCGCTGAGGGGCCCCC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_2749#0 AGTGCAGTTGCGGATCACCACCAGGAATCGCCGACAAGCCGATAATCCTCCCTTTTAAGC 60
consensus_2749#1 ------------------------------------------------------------
consensus_2749#0 GGGACGCAGCGAAAGGTCCCAGTATCCACGCACCATGGCAGACAGAGAAAACCTCGTGTA 120
consensus_2749#1 -------------------------CCACGCACCATGGCAGACAGAGAAAAT-TCTTGTA 34
************************** ** ****
consensus_2749#0 CCAGGCTAAACTGGCCGAGCAGGCGGAAAGATATGACGAAATGGTGGAGTCGATGAAGAA 180
consensus_2749#1 CCAGGCTAAACTGGCCGAGCAGGCGGAAAGATATGACGAAATGGTGGAGTCGATGAAGAA 94
************************************************************
consensus_2749#0 GGTGGCGGGTTTGGACAAGGAGCTGACCATGGAAGAGAGGAACCTGCTGTCGGTTGCCTA 240
consensus_2749#1 GGTGGCGGGTTTGGACAAGGAGCTGACCATGGAAGAGAGGAACCTGCTGGCGGTTGC-TA 153
************************************************* ******* **
consensus_2749#0 CAAGAACGTCATCGGAGCTCGACGAGCTTCTTGGAGG-ATAATTAGCAGCCTGGAGCAGA 299
consensus_2749#1 CAAGAACGTCATCGGAGCTCGACGAGCTTCTTGGAGGGATAATTAGCAGCCTCCACCAGA 213
************************************* ************** * ****
consensus_2749#0 AAGAAGAAGGCAAAGCTGCAGAGGAGAAGATGAAAATGATCAAGGAGTACAGGAAAGTGA 359
consensus_2749#1 GTACCTGCGCTGAGGGGCCCCC-------------------------------------- 235
* * * *
consensus_2749#0 TTGAAAACGAGCTGAAAACGATCTGCAACGATATTCTGGTTGTACTGGACAAGCACCTGA 419
consensus_2749#1 ------------------------------------------------------------
consensus_2749#0 TCCCCACTGCATTAATGGGAGAATCCAAGGTTTTCTACTACAAGATGAAGGGAGATTACC 479
consensus_2749#1 ------------------------------------------------------------
consensus_2749#0 ACAGGTACCTGGCAGAGTTTGCTACAGGAAACGACAGGAAGGAGGCGGCGGAGAACAGTC 539
consensus_2749#1 ------------------------------------------------------------
consensus_2749#0 TGATGGCGTACAAAGCTGCTAACGACATCGCCCAGAGCGAGCTCACTTCCACACACCCCA 599
consensus_2749#1 ------------------------------------------------------------
consensus_2749#0 TCCGTCTGGGATTGGCCCTCAACTTTTCAGTCTTCTACTACGAAATCCTAAACTCGGCG 658
consensus_2749#1 -----------------------------------------------------------
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| Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |