Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Takifugu rubripes
cluster # 2760 cluster # 2760       Sequences # 17       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2760#0 length = 519 sequences # 17  
consensusID : consensus_2760#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 17
consensus length = 519
fasta sequence 
                              [GCACGAGCCCTAGCTGAAGACGAAACATGCCAGCAAAAGGTCCATTACAATCTGTCCAGGTTTTTGGACGTAAGAAAACTGCCACAGCAGTTGCCCACTGCAAGAGGGGGAATGGCCTTCTGAAGGTTAATGGCAAACCTCTGGAGATGTTGGAGCCTGCCACCCTCCAGTACAAGCTCCTGGAGCCCGTGTTGCTGCTGGGGAAGGAGCGCTTTGCTGGAGTTGACATCAGAGTCAGAGTGAAGGGTGGCGGACGTGTCGCACAAGTCTACGCCATCCGCCAGGCCATCTCTAAAGCCCTGGTCGCCTACTACCAGAAGTATGTCGATGAGGCTTCCAAGAAAGAGATCAAAGACATCCTGATCCAGTACGACAGGACCCTGCTGGTCGCCGACCCACGTCGCTGCGAGTCCAAGAAGTTCGGTGGACCTGGAGCCCGTGCTCGTTACCAGAAGTCCTACCGTTAA-CCCCCCCGTACCCTTTGATAATAAATGGAGGAACGAAATATTANAAAAAAAA]

[+] EMBL CA845308             [GCACGAGCCCTAGCTGAAGACGAAACATGCCAGCAAAAGGTCCATTACAATCTGTCCAGGTTTTTGGACGTAAGAAAACTGCCACAGCAGTTGCCCACTGCAAGAGGGGGAATGGCCTTCTGAAGGTTAATGGCAAACCTCTGGAGATGTTGGAGCCTGCCACCCTCCAGTACAAGCTCCTGGAGCCCGTGTTGCTGCTGGGGAAGGAGCGCTTTGCTGGAGTTGACATCAGAGTCAGAGTGAAGGGTGGCGGACGTGTCGCACAAGTCTACGCCATCCGCCAGGCCATCTCTAAAGCCCTGGTCGCCTACTACCAGAAATATGTCGATGAGGCTTCCAAGAAAGAGATCAAAGACATCCTGATCCAGTACGACAGGACCCTGCTGGTCGCCGACCCACGTCGCTGCGAGTCCAAGAAGTTCGGTGGACCTGGAGCCCGTGCTCGTTAC                                                                       ]
[+] EMBL BU805463             [        CCTAGCTGAAGACGAAACATGCCAGCAAAAGGTCCATTACAATCTGTCCAGGTTTTTGGACGTAAGAAAACTGCCACAGCAGTTGCCCACTGCAAGAGGGGGAATGGCCTTCTGAAGGTTAATGGCAAACCTCTGGAGATGTTGGAGCCTGCCACCCTCCAGTACAAGCTCCTGGAGCCCGTGTTGCTGCTGGGGAAGGAGCGCTTTGCTGGAGTTGACATCAGAGTCAGAGTGAAGGGTGGCGGACGTGTCGCACAAGTCTACGCCATCCGCCAGGCCATCTCTAAAGCCCTGGTCGCCTACTACCAGAAATATGTCGATGAGGCTTCCAAGAAAGAGATCAAAGACATCCTGATCCAGTACGACAGGACCCTGCTGGTCGCCGACCCACGTCGCTGCGAGTCCAAGAAGTTCGGTGGACCTGGAGCCCGTGCTCGTTACCAGAAGTCCTACCGTTAA CCCCCCCGTACCCTTTGATAATAAATGGAGGAACGAAATATTANAAAAAAAA]
[+] EMBL CA588904             [        CCTAGCTGAAGACGAAACATGCCAGCAAAAGGTCCATTACAATCTGTCCAGGTTTTTGGACGTAAGAAAACTGCCACAGCAGTTGCCCACTGCAAGAGGGGGAATGGCCTTCTGAAGGTTAATGGCAAACCTCTGGAGATGTTGGAGCCTGCCACCCTCCAGTACAAGCTCCTGGAGCCCGTGTTGCTGCTGGGGAAGGAGCGCTTTGCTGGAGTTGACATCAGAGTCAGAGTGAAGGGTGGCGGTTTTGTCGCACAAGTCTACGCCATCCGCCAGGCCATCTCTAAAGCCCTGGTCGCCTACTACCAGAAGTATGTCGATGAGGCTTCCAAGAAAGAGATCAAAGACATCCTGATCCAGTACGACAGGACCCTGCTGGTCGCCGACCCACGTCGCTGCGAGTCC                                                                                                           ]
[+] EMBL CA847164             [                      AAACATGCCAGCAAAAGGTCCATTACAATCTGTCCAGGTTTTTGGACGTAAGAAAACTGCCACAGCAGTTGCCCACTGCAAGAGGGGGAATGGCCTTCTGAAGGTTAATGGCAAACCTCTGGAGATGTTGGAGCCTGCCACCCTCCAGTACAAGCTCCTGGAGCCCGTGTTGCTGCTGGGGAAGGAGCGCTTTGCTGGAGTTGACATCAGAGTCAGAGTGAAGGGTGGCGGACGTGTCGCACAAGTCTACGCCATCCGCCAGGCCATCTCTAAAGCCCTGGTCGCCTACTACCAGAAGTATGTCGATGAGGCTTCCAAGAAAGAGATCAAAGACATCCTGATCCAGTACGACAGGACCCTGCTGGTCGCCGACCCACGTCGCTGCGAGTCCAAGAAGTTCGGTGGACCT                                                                                         ]
[+] EMBL CA330252             [                       AACATGCCAGCAAAAGGTCCATTACAATCTGTCCAGGTTTTTGGACGTAAGAAAACTGCCACAGCAGTTGCCCACTGCAAGAGGGGGAATGGCCTTCTGAAGGTTAATGGCAAACCTCTGGAGATGTTGGAGCCTGCCACCCTCCAGTACAAGCTCCTGGAGCCCGTGTTGCTGCTGGGGAAGGAGCGCTTTGCTGGAGTTGACATCAGAGTCAGAGTGAAGGGTGGCGGACGTGTCGTACAAGTCTACGCCATCCGCCAGGCCATCTCTAAAGCCCTGGTCGCCTACTACCAGAAGTATGTCGATGAGGCTTCCAAGAAAGAGATCAAAGACATCCTGATCCAGTACGACAGGACCCTGCTGGTCGCCGACCCACGTCGCTGCGAGTCCAAGAAGTTCGGTGGACCTGGAGCCCGTGCTCGTTACCAGAAGTCCTACCGTTAA CCCC                                                ]
[+] EMBL CA845767             [                           TGCCAGCAAAAGGTCCATTACAATCTGTCCAGGTCTTTGGACGTAAGAAAACTGCCACAGCAGTTGCCCACTGCAAGAGGGGGAATGGCCTTCTGAAGGTTAATGGCAAACCTCTGGAGATGTTGGAGCCTGCCACCCTCCAGTACAAGCTCCTGGAGCCCGTGTTGCTGCTGGGGAAGGAGCGCTTTGCTGGAGTTGACATCAGAGTCAGAGTGAAGGGTGGCGGACGTGTCGCACAAGTCTACGCCATCCGCCAGGCCATCTCTAAAGCCCTGGTCGCCTACTACCAGAAATATGTCGATGAGGCTTCCAAGAAAGAGATCAAAGACATCCTGATCCAGTACGACAGGACCCTGCTGGTCGCCGACCCACGTCGCTGCGAGTCCAAGAAGTTCGGTGGACCTGGAGCCCGTGCTCGTTACCAGAAGTCCTACCGTTAA CCCCCCCGTACCCTTTGA                                  ]
[+] EMBL CA330561             [                            GCCAGCAAAAGGTCCATTACAATCTGTCCAGGTTTTTGGACGTAAGAAAACTGCCACAGCAGTTGCCCACTGCAAGAGGGGGAATGGCCTTCTGAAGGTTAATGGCAAACCTCTGGAGATGTTGGAGCCTGCCACCCTCCAGTACAAGCTCCTGGAGCCCGTGTTGCTGCTGGGGAAGGAGCGCTTTGCTGGAGTTGACATCAGAGTCAGAGTGAAGGGTGGCGGACGTGTCTCACAAGTCTACGCCATCCGCCAGGCCA                                                                                                                                                                                                                                        ]
[-] EMBL CA332161             [                                    AAGGTCCATTACAATCTGTCCAGGTTTTTGGACGTAAGAAAACTGCCACAGCAGTTGCCCACTGCAAGAGGGGGAATGGCCTTCTGAAGGTTAATGGCAAACCTCTGGAGATGTTGGAGCCTGCCACCCTCCAGTACAAGCTCCTGGAGCCCGTGTTGCTGCTGGGGAAGGAGCGCTTTGCTGGAGTTGACATCAGAGTCAGAGTGAAGGGTGGCGGACGTGTCGCACAAGTCTACGCCAAACAACAGGCCATCTCTAAAGCCCTGGTCGCCTACTACCAGAAGTATGTCGATGAGGCTTCCAAGAAAGAGATCAAAGACATCCTGATCCAGTACGACAGGACCCTGCTGGTCGCCGACCCACGTCGCTGCGAGTCCAAGAAGTTCGGTGGACCTGGAGCCCGTGCTCGTTACCAGAAGTCCTACCGTTAA CCCCCCCGTACCCTGTGATAATAAATGGAGGAATGAAA              ]
[+] EMBL FR0056228            [                                         CCATTACAGTCTGTCCAGGTTTTTGGACGTAACAAAACTGCCACAGCAGTTGCCCACTGCAAGAGGGGGAATGGCCTTCTGAAGGTTAATGGCAAACCTCTGGAGATGTTGGAGCCTGCCACCCTCCAGTACAAGCTCCTGGAGCCCGTGTTGCTGCTGGGGAAGGAGCGCTTTGCTGGCGTTGACATCAGAGTCAGAGTGAGGGGTGGCAGACGTGTCGCACAGGTCTACGCCATCCGCCAGGCCATCTCTAAAGCCCTGGTCGCCTACTAGCAGAAATATGTCGATGAGGCTTCCAAGAGAGCGATCAGAGACATCCTGATCCAGTTACACAGGACCCTGCTGGTCGCCGACCCACGTCGCTGCTAG                                                                                                              ]
[+] EMBL FR0058013            [                                                AATCTGTCCAGGTTTTTGGACGTAAGAAAACTGCCACAGCAGTTGCCCACTGCAAGAGGGGGAATGGCCTTCTGAAGGTTAATGGCAAACCTCTGGAGATGTTGGAGCCTGCCACCCTCCAGTACAAGCTCCTGGAGCCCGTGTTGCTGCTGGGGAAGGAGCGCTTTGCTGGAGTTGACATCAGAGTCAGAGTGAAGGGTGGCGGACGTGTCGCACAAGTCTACGCCATCCGCCAGGCCATCTCTANAGCCCTGGTCGCCTACTACCAGAAGTATGTCGATGAGGC                                                                                                                                                                                          ]
[+] EMBL CA330226             [                                                      TCCAGGTTTTTGGACGTAAGAAAACTGCCACAGCAGTTGCCCACTGCAAGAGGGGGAATGGCCTTCTGAAGGTTAATGGCAAACCTCTGGAGATGTTGGAGCCTGCCACCCTCCAGTACAAGCTCCTGGAGCCCGTGTTGCTGCTGGGGAAGGAGCGCTTTGCTGGAGTTGACATCAGAGTCAGAGTGAAGGGTGGCGGACGTGTCGCACAAGTCTACGCCATCCGCCAGGCCATCTCTAAAGCCCTGGTCGCCTACTACCAGAAGTATGTCGATGAGGCTTCCAAGAAAGAGATCAAAGACATCCTGATCCAGTACGACAGGACCCTGCTGGTCGCCGACCCACGTCGCTGCGAGTCCAAGAAGTTCGGTGGACCTGGAGCCCGTGCTCGTTACCAGAAGTCCTACCGTTAA CCCCCCCGTACCCTTT                                    ]
[+] EMBL FR0055726            [                                                        CAGGTTTTTGGACGTAAGAAAACTGCCACAGCAGTTGCCCACTGCATGAGGGGGAATGGCCTTCTGAAGGTTAATGGCAAACCTCTGGAGATGTTGGAGCCTGCCACCCTCCAGTACAAGCTCCTGGAGCCCGTGTTGCTGCTGGGGAAGGAGCGCTTTGCTGGAGTTGACATCAGAGTCAGAGTGAAGGGTGGCGGACGTGTCGCACAAGTCTACGCCATCCGCCAGGCCATCTCTAAAGCCCTGGTCGCCTACTACCAGAAATATGTCGATGAGGCTTCCAAGAAAGAGATCAAAGACATCCTGATCCAGTACGACAGGACCCTGCTGGTCGCCGACCCACGTCGCTGCGAGTCCAAGAAGTTCGGTGGACCTGGAGCCCGTGCTCGTTACCAGAAGTCCTACCGTTAACCCCCCCCGTACCCTTTGATAATAAATG                         ]
[+] EMBL FR0056124            [                                                         AGGTTTTTGGACGTAAGAAAACTGCCACAGCAGTTGCCCACTGCAAGAGGGGGAATGGCCTTCTGAAGGTTAATGGCAAACCTCTGGAGATGTTGGAGCCTGCCACCCTCCAGTACAAGCTCCTGGAGCCCGTGTTGCTGCTGGGGAAGGAGCGCTTTGCTGGAGTTGACATCAGAGTCAGAGTGAAGGGTGGCGGACGTGTCGCACAAGTCTACGCCATCCGCCAGGCCATCTCTAAAGCCCTGGTCGCCTACTACCAGAAGTATGTCGATGAGGCTTCCAAGAAAGAGATCAAAGACATCCTGATCCAGTACGACAGGACCCTGCTGGTCGCCGACCCACGTCGCTGCGAGTCCAAGAAGTTCGGTGGACCTGGAGCCCGTGCTCGTTACCAGAAGTCCTACCGTTAA CCCCCCCGTACCCTTTGAT                                 ]
[+] EMBL FR0056437            [                                                                TGGACGTAAGAAAACTGCCACAGCAGTTGCCCACTGCAAGAGGGGGAATGGCCTTCTGAAGGTTAATGGCAAACCTCTGGAGATGTTGGAGCCTGCCACCCTCCAGTACAAGCTCCTGGAGCCCGTGTTGCTGCTGGGGAAGGAGCGCTTTG                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CA340942             [                                                                                                                                                                                                                                                       TGGCGGACGTGTCGCACAAGTCTACGCCATCCGCCAGGCCATCTCTAAAGCCCTGGTCGCCTACTACCAGAAATATGTCGATGAGGCTTCCAAGAAAGAGATCAAAGACATCCTGATCCAGTACGACAGGACCCTGCTGGTCGCCGACCCACGTCGCTGCGAGTCCAAGAAGTTCGGTGGACCTGGAGCCCGTGCTCGTTACCAGAAGTCCTACCGTTAA CCCCCCCGTACCCTTTGATAATAAATGGAGGAA                   ]
[+] EMBL CA845366             [                                                                                                                                                                                                                                                                                                                                                                     TCCTGATCCAGTACGACAGGACCCTGCTGGTCGCCGACCCACGTCGCTGCGAGTCCAAGAAGTTCGGTGGACCTGGAGCCCGTGCTCGTTACCAGAAGTCCTACCGTTAA CCCCCCCGTACCCTTTGATAATAAATGGAGGAACGAAATA            ]
[+] EMBL CA845142             [                                                                                                                                                                                                                                                                                                                                                                                                     GCCGATCCACGTCGCTGTGAGTCCAAGAAGTTCGGTGGACCTGGAGCCCGTGCTCGTTACCAGAAGTCCTACCGTTAA CCCCCCCGTACCCTTTGATAATAAATGGAGGAACGAAA              ]




>consensus_2760#0
GCACGAGCCCTAGCTGAAGACGAAACATGCCAGCAAAAGGTCCATTACAATCTGTCCAGG
TTTTTGGACGTAAGAAAACTGCCACAGCAGTTGCCCACTGCAAGAGGGGGAATGGCCTTC
TGAAGGTTAATGGCAAACCTCTGGAGATGTTGGAGCCTGCCACCCTCCAGTACAAGCTCC
TGGAGCCCGTGTTGCTGCTGGGGAAGGAGCGCTTTGCTGGAGTTGACATCAGAGTCAGAG
TGAAGGGTGGCGGACGTGTCGCACAAGTCTACGCCATCCGCCAGGCCATCTCTAAAGCCC
TGGTCGCCTACTACCAGAAGTATGTCGATGAGGCTTCCAAGAAAGAGATCAAAGACATCC
TGATCCAGTACGACAGGACCCTGCTGGTCGCCGACCCACGTCGCTGCGAGTCCAAGAAGT
TCGGTGGACCTGGAGCCCGTGCTCGTTACCAGAAGTCCTACCGTTAACCCCCCCGTACCC
TTTGATAATAAATGGAGGAACGAAATATTANAAAAAAAA

clustalw multiple alignements is not computed in this case
Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner    (hubert.wassner@noos.fr)