cluster # 2792

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Takifugu rubripes
cluster # 2792 cluster # 2792 Sequences # 21 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_2792#0 length = 1253 sequences # 19

consensus_2792#1 length = 389 sequences # 1
consensus_2792#2 length = 245 sequences # 1

consensusID : consensus_2792#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 19
consensus length = 1253
fasta sequence

                              [GGACCAATCTGTTTTATTTATCCAATTCCAGTGTTTGAATTTAATAATTACACTGGTTAATATCAAGAACTGAGAATACAAACCAGCTAAAGACAATGATCAACAGTCCCACTTCAGGGCATT-TATTCAGGGTAGAAGCAGGAAGACAGTCAAATATTTGGACATGAGTGGCAGCGCAGAGTATAGTGATCCCAAAGATTCAAGAATTTTAAACATTAAAGCACATACAGACTGAGATTGTGTGGTGCCGTTTGATCAATGCACATCAAAATCTAAC---CTATTTTTGGGCTGAGCGGCAGTGAAGGC-TTTTTTTATCCAAACTAGAGAAGCAACAGTGGTGTGCAGTAAATAAAATGGACTTTAGTGAAGGTAATGATAAGGTTTGTAAATCATCTCTTCCTCCCTGTCACCGTTAATCTACACAAGAATTATCAAGGCATAATTTCAGTCAAATCATGGAGGACAAGATGCGCTAAGATTCTGCACGTCATTAAGCAAAGGAGCATGAGCATTCCTCTACCGACCTCAGCCAACAGAACCTTTCTGCTCTGGACTCGTTGACCACATAGTCACTTTCATTTCTTTGGTTTCCCTGGGAGATTCAGAGACACCCGGTCATCATGATGTTTATTACTTGTTCAGCCAACATAAACAGATCCAGCAGGTGAATTGCGAGATGAAGACATGCACCTTCATTAGGCTCCCAACGCCTCAGACAGAAAACAGCTAAAGAGACTAGATTTCAATCGGAATTTAAAGATTTTAGTCAAATTTCACAGCGACAGAACAGGGGAGTGTGCTCAAGGTCGGCAGCGTTGGATGAAGCGTGGGTACAGGCACACGTCTCGTATGTGATGTCTGTTCAGCAGCCAGGTGAGGAAACGCTCCAGGCCCAGACCATAACCTCCGTGAGGGCATGTGCCATACTTCCTCTGGTCGGTGTACCAGTAGTAGGGCGTGGGGTCGATTCCCTCCCTCTTGTATCCCTCCAGCAGCTCCTCGGAGTCCCAGATACGCATGGATCCTCCAACGATCTCTCCAACATTTGGCATCAGCACGTCGACCGATTCAGTGAGGCGCTTGTCCTCGCTGCAGCGCTGCATGTAGAAGGACTTGATCTCAGCAGGGAACCTGCAGAGCAGTATGGGGTCATTGATTGTATCTGTCATCACCCTCTCTG-GAGCCTCCGGGATGTCCTCTCCAAACTCATAGAAAGT-GCCGGCCTCCTTCTTGACATCATGCTGCTTTAGCCA]

[+] EMBL CA332173             [GGACCAATCTGTTTTATTTATCCAATTCCAGTGTTTGAATTTAATAATTACACTGGTTAATATCAAGAACTGAGAATACAAACCAGCTAAAGACAATGATCAACAGTCCCACTTCAGGGCATT TATTCAGGGTAGAAGCAGGAAGACAGTCAAATATTTGGACATGAGTGGCAGCGCAGAGTATAGTGATCCCAAAGATTCAAGAATTTTAAACATTAAAGCACATTCTTACTGAGATTGTGTGGTGCCGTTTGATCAATGCACATCAAAATCTAAC   CTATTTTTGGGCTGAGCGGCAGTGAAGGCTTTTTTTTATCCAAACTAGAGAAGCAACAGTGGTGTGCAGTAAATAAAGTGGACTTTAGTGAAGGTAATGATAAGGTTTGTAAATCATCTCTTCCTCCCTGTCACCGTTAATCTACACAAGAATTATCAAGGCATAATTTCAGTCAAATCATGGAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL CA330250             [                                                                                       TAAAGACAATGATCAACAGTCCCACTTCAGGGCATT TATTCAGGGTAGAAGCAGGAAGACAGTCAAATATTTGGACATGAGTGGCAGCGCAGAGTATAGTGATCCCAAAGATTCAAGAATTTTAAACATTAAAGCACATACAGACTGAGATTGTGTGGTGCCGTTTGATCAATGCACATCAAAATCTAAC   CTATTTTTGGGCTGAGCGGCAGTGAAGGC TTTTTTTATCCAAACTAGAGAAGCAACAGTGGTGTGCAGTAAATAAAATGGACTTTAGTGAAGGTAATGATAAGGTTTGTAAATCATCTCTTCCTCCCTGTCACCGTTAATCTACACAAGAATTATCAAGGCATAATTTCAGTCAAATCATGGAGGACAAGATGCGCTAAGATTCTGCACGTCATTAAGCAAAGGAGCATGAGCATTCCTCTACCGACCTCAGCCAACAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CA332529             [                                                                                                    CAACAGTCCCACTTCAGGGCATT TATTCAGGGTAGAAGCAGGAAGACAGTCAAATATTTGGACATGAGTGGCAGCGCAGAGTATAGTGATCCCAAAGATTCAAGAATTTTAAACATTAAAGCACATACAGACTGAGATTGTGTGGTGCCGTTTGATCAATGCACATCAAAATCTAAC   CTATTTTTGGGCTGAGCGGCAGTGAAGGC TTTTTTTATCCAAACTAGAGAAGCAACAGGGGTGTGCAGTAAATAAAATGGACTTTAGTGAAGGTAATGATAAGGTTTGTAAATCATCTCTTCCTCCCTGTCACCGTTAATCTACACAAGAATTATCAAGGCATAATTTCAGTCAAATCATGGAGGACAAGATGCGCTAAGATTCTGCACGTCATTAAGCAAAGGAGCATGAGCATTCCTCTACCGACCTCAGCCAACAGAACCTTTCTGCTCTGGACTCGTTGACCACATAGTCACTTTCATTTCTTTGGTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CA332174             [                                                                                                      ACCGCCCCACTTCATGTTTTTCCCTTCAGGGTAGAAGCAGGAAGACAGTCAAATATTTGGACATGAGTGGCAGCGCAGAGTATAGTGATCCCAAAGATTCAAGAATTTTAAACATTAAAGCACATACAGACTGAGATTGTGGGGGGCCGTTTGATCAATGCACATCAAAATCTAACCTTCTATTTTTGGGCTGAGCGGCAGGGAAGGC TTTTTTTATCCAATTAATAGAAGCAACAGGGGGGTGCAGTAAATAAAATGGACTTTAGTGAAGATAATGATAAGGTTTGTAAATCATCTCTTCCTCCCTGTCACCGTTAATCTACACAAGAATTATCAAGGCATAATTTCAGCCAAATCATGGAGGACAAGATGCGCTAAGATTCTGCACGTCATTAAGCAAAGGAGCATGAGCATTCCTCTACCGACCTCAGCCAACAGAACCTTTCTGCTCTGGACTCGTTGACCACATTGCCACTTTCAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CA331812             [                                                                                                       CAGTCCCACTTCAGGGCATT TATTCAGGGTAGAAGCAGGAAGACAGTCAAATATTTGGACATGAGTGGCAGCGCAGAGTATAGTGATCCCAAAGATTCAAGAATTTTAAACATTAAAGCACATACAGACTGAGATTGTGTGGTGCCGTTTGATCAATGCACATCAAAATCTAAC   CTATTTTTGGGCTGAGCGGCAGTGAAGGC TTTTTTTATCCAAACTAGAGAAGCAACAGTGGTGTGCAGTAAATAAAATGGACTTTAGTGAAGGTAATGATAAGGTTTGTAAATCATCTCTTCCTCCCTGTCACCGTTAATCTACACAAGAATTATCAAGGCATAATTTCAGTCAAATCATGGAGGACAAGATGCGCTAAGATTCTGCACGTCATTAAGCAAAGGAGCATGAGCATTCCTCTACCGACCTCAGCCAACAGAACCTTTCTGCTCTGGACTCGTTGACCACATAGTCACTTTCATTTCTTTGGTTTCCCTGGGAGATTCAGAGACACCCGGTCATCATGATGTTTATTACTTGTTCAGCCAACATAAACAGATCCAGCAGGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CA332658             [                                                                                                       CAGTCCCACTTCAGGGCATT TATTCAGGGTAGAAGCAGGAAGACAGTCAAATATTTGGACATGAGTGGCAGCGCAGAGTATAGTGATCCCAAAGATTCAAGAATTTTAAACATTAAAGCACATACAGACTGAGATTGTGTGGTGCCGTTTGATCAATGCACATCAAAATCTAACCTTCTATTTTTGGGCTGAGCGGCAGTGAAGGC TTTTTTTATCCAAACTAGAGAAGCAACAGTGGTGTGCAGTAAATAAAATGGACTTTAGTGAAGATAATGATAAGGTTTGTAAATCATCTCTTCCTCCCTGTCACCGTTAATCTACACAAGAATTATCAAGGCATAATTTCAGTCAAATCATGGAGGACAAGATGCGCTAAGATTCTGCACGTCATTAAGCAAAGGAGCATGAGCATTCCTCTACCGACCTCAGCCAACAGAACCTTTCTGCTCTGGACTCGTTGACCACATTGTCACTTTCATTTTTTTGGTTTCCCTGGGAGATTCAGAGACACCCGGTCATCATG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CA332452             [                                                                                                       CAGTCCCACTTCAGGGCATT TATTCAGGGTAGAAGCAGGAAGACAGTCAAATATTTGGACATGAGTGGCAGCGCAGAGTATAGTGATCCCAAAGATTCAAGAATTTTAAACATTAAAGCACATACAGACTGAGATTGTGTGGTGCCGTTTGATCAATGCACATCAAAATCTAAC   CTATTTTTGGGCTGAGCGGCAGTGAAGGC TTTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CA332293             [                                                                                                        AGTCCCACTTCAGGGCATT TATTCCCGGTAGAAGCAGGAAGACAGTCAAATATTTGGACATGAGTGGCAGCGCAGAGTATAGTGATCCCAAAGATTCAAGAATTTTAAACATTAAAGCACATACAGACTGAGATTGTGTGGTGCCGTTTGATCAATGCACATCAAAATCTAAC   CTATTTTTGGGCTGAGCGGCAGTGAAGGC TTTTTTTATCCAAACTAGAGAAGCAACTGTGGTGTGCAGTAAATAAAATGGACTTTAGTGAAGGTAATGATAAGGTTTGTAAATCATCTCTTCCTCCCTGTCACCGTTAATCTACACAAGAATTATCAAGGCATAATTTCAGTCAAATCATGGAGGACAAGATGCGCTAAGATTCTGCACGTCATTAAGCAAAGGAGCATGAGCATTCCTCTACCGACCTCAGCCAACAGAACCTTTCTGCTCTGGACTCGTTGACCACATAGTCAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CA332509             [                                                                                                        AGTCCCACTTCAGGGCATT TATTCAGGGTAGAAGCAGGAAGACAGTCAAATATTTGGACATGAGTGGCAGCGCAGAGTATAGTGATCCCAAAGATTCAAGAATTTTAAACATTAAAGCACATACAGACTGAGATTGTGTGGTGCCGTTTGATCAATGCACATCAAAATCTAAC   CTATTTTTGGGCTGAGCGGCAGTGAAGGC TTTTTTTATCCAAACTAGAGAAGCAACAGTGGTGTGCAGTAAATAAAATGGACTTTAGTGAAGGTAATGATAAGGTTTGTAAATCATCTCTTCCTCCCTGTCACCGTTAATCTACACAAGAATTATCAAGGCATAATTTCAGTCAAATCATGGAGGACAAGATGCGCTAAGATTCTGCACGTCATTAAGCAAAGGAGCATGAGCATTCCTCTACCGACCTCAGCCAACAGAACCTTTCTGCTCTGGACTCGTTGACCACATAGTCACTTTCATTTCTTTGGTTTCCCTGGGAGATTCAGAGACACCCGGTCATCATGATGTTTATTACTTGTTCAGCCAACATAAACAGATCCAGCAGGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CA332064             [                                                                                                         GTCCCACTTCAGGGCATT TATTCCCGGTAGAAGCAGGAAGACAGTCAAATATTTGGACATGAGTGGCAGCGCAGAGTATAGTGATCCCAAAGATTCAAGAATTTTAAACATTAAAGCACATACAGACTGAGATTGTGTGGTGCCGTTTGATCAATGCACATCAAAATCTAAC   CTATTTTTGGGCTGAGCGGCAGTGAAGGC TTTTTTTATCCAAACTAGAGAAGCAACAGTGGTGTGCAGTAAATAAAATGGACTTTAGTGAAGGTAATGATAAGGTTTGTAAATCATCTCTTCCTCCCTGTCACCGTTAATCTACACAAGAATTATCAAGGCATAATTTCAGTCAAATCATGGAGGACAAGATGCGCTAAGATTCTGCACGTCATTAAGCAAAGGAGCATGAGCATTCCTCTACCGACCTCAGCCAACAGAACCTTTCTGCTCTGGACTCGTTGACCACATAGTCACTTTCATTTCTTTGGTTTCCCTGGGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CA332334             [                                                                                                         GTCCCACTTCAGGGCATT TATTCAGGGTAGAAGCAGGAAGACAGTCAAATATTTGGACATGAGTGGCAGCGCAGAGTATAGTGATCCCAAAGATTCAAGAATTTTAAACATTAAAGCACATACAGACTGAGATTGTGTGGTGCCGTTTGATCAATGCACATCAAAATCTAAC   CTATTTTTGGGCTGAGCGGCAGTGAAGGC TTTTTTTATCCAAACTAGAGAAGCAACAGTGGTGTGCAGTAAATAAAATGGACTTTAGTGAAGGTAATGATAAGGTTTGTAAATCATCTCTTCCTCCCTGTCACCGTTAATCTACACAAGAATTATCAAGGCATAATTTCAGTCAAATCATGGAGGACAAGATGCGCTAAGATTCTGCACGTCATTAAGCAAAGGAGCATGAGCATTCCTCTACCGACCTCAGCCAACAGAACCTTTCTGCTCTGGACTCGTTGACCACATAGTCACTTTCATTTCTTTGGTTTCCCTGGGAGATTCAGAGACACCCGGTCATCATGATGTTTATTACTTGTTCAGCCAACATAAACAGATCCAGCAGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CA332525             [                                                                                                     tttttTCCCACTTCAGGGTTTT TATTCAGGGTAGAAGCAGGAAGACAGTCAAATATTTGGACATGAGTGGCAGCGCAGAGTATAGTGATCCCAAAGATTCAAGAATTTTAAACATTAAAGCACATACAGACTGAGATTGGGGGGGGCCGTTTGATCAATGCACATCAAAATCTAAC   CTATTTTTGGGCTGAGCGGCAGTGAAGGC TTTTTTTATCCAAACTAGATAATTTACAGGGGGGGGCAGTAAATAAAATGGACTTTAGTGAAGGTAATGATAAGGTTTGTAAATCATCTCTTCCTCCCTGTCACCGTTAATCTACACAAGAATTATCAAGGCATAATTTCAGTCAAATCATGGAGGACAAGATGCGCTAAGATTCTGCACGTCATTAAGCAAAGGAGCATGAGCATTCCTCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CA332481             [                                                                                                          TCCCACTTCAGGGCATT TATTCAGGGTAGAAGCAGGAAGACAGTCAAATATTTGGACATGAGTGGCAGCGCAGAGTATAGTGATCCCAAAGATTCAAGAATTTTAAACATTAAAGCACATACAGACTGAGATTGTGTGGTGCCGTTTGATCAATGCACATCAAAATCTAAC   CTATTTTTGGGCTGAGCGGCAGTGAAGGC TTTTTTTATCCAAACTAGAGAAGCAACAGTGGTGTGCAGTAAATAAAATGGACTTTAGTGAAGGTAATGATAAGGTTTGTAAATCATCTCTTCCTCCCTGTCACCGTTAATCTACACAAGAATTATCAAGGCATAATTTCAGTCAAATCATGGAGGACAAGATGCGCTAAGATTCTGCACGTCATTAAGCAAAGGAGCATGAGCATTCCTCTACCGACCTCAGCCAACAGAACCTTTCTGCTCTGGACTCGTTGACCACATTGTCACTTTCATTTTTTTGGTTTCCCTGGGAGATTCAGAGACACCCGGNCATCATGATGTTTATTACTTGTTCAGCCAACATAAACAGATCCAGCAGGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CA332634             [                                                                                                                TTCAGGGCATT TATTCAGGGTAGAAGCAGGAAGACAGTCAAATATTTGGACATGAGTGGCAGCGCAGAGTATAGTGATCCCAAAGATTCAAGAATTTTAAACATTAAAGCACATACAGACTGAGATTGTGTGGTGCCGTTTGATCAATGCACATCAAAATCTAAC   CTATTTTTGGGCTGAGCGGCAGTGAAGGC TTTTTTTATCCAAACTAGAGAAGCAACAGTGGTGTGCAGTAAATAAAATGGACTTTAGTGAAGGTAATGATAAGGTTTGTAAATCATCTCTTCCTCCCTGTCACCGTTAATCTACACAAGAATTATCAAGGCATAATTTCAGTCAAATCATGGAGGACAAGATGCGCTAAGATTCTGCACGTCATTAAGCAAAGGAGCATGAGCATTCCTCTACCGACCTCAGCCAACAGAACCTTTCTGCTCTGGACTCGTTGACCACATAGTCACTTTCATTTCTTTGGTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CA588850             [                                                                                                                                                                                       ATAGTGATCCCAAAGATTCAAGAATTTTAAACATTAAAGCACATACAGACTGAGATTGTGTGGTGCCGTTTGATCAATGCACATCAAAATCTAAC   CTATTTTTGGGCTGAGCGGCAGTGAAGGC TTTTTTTATCCAAACTAGAGAAGCAACAGTGGTGTGCAGTAAATAAAATGGACTTTAGTGAAGGTAATGATAAGGTTTGTAAATCATCTCTTCCTCCCTGTCACCGTTAATCTACACAAGAATTATCAAGGCATAATTTCAGTCAAATCATGGAGGACAAGATGCGCTAAGATTCTGCACGTCATTAAGCAAAGGAGCATGAGCATTCCTCTACCGACCTCAGCCAACAGAACCTTTCTGCTCTGGACTCGTTGACCACATTGTCACTTTCATTTTTTTGGTTTCCCTGGGAGATTCAGAGACACCCGGTCATCATGATGTTTATTACTTGTTCAGCCAACATAAACAGATCCAGCAGGTGAATTGTGAGATGAAGACATGCACCTTCATTAGGCTCCCAACGCCTCAGACAGAAAACAGCTAAAGAGACTAGATTTCAATCGGAATTTAAAGATTTTAGTCAAATTTCACAGCGACAGAACAGGGGAGTGTGCTCAAGGTCGGCAGCGTTGGATGAAGCGTGGGTACAGGCACACGTCTCGTATGTGATGTCTGTTCAGCAGCCAGGT                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CA331214             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        CCGGTCATCATGATGTTTATTACTTGTTCAGCCAACATAAACAGATCCAGCAGGTGAATTGCGAGATGAAGACATGCACCTTCATTAGGATCCCAACGCCTCAGACAGAAAACAGCTAAAGAGACTAGATTTCAATCGGAATTTAAAGATTTTAGTCAAATTTCACAGCGACAGAACAGGGGAGTGTGCTCAAGGTCGGCAGCGTTGGATGAAGCGTGGGTACAGGCACACGTCTCGTATGTGATGTCTGTTCAGCAGCCAGGTGAGGAAACGCTCCAGGCCCAGACCATAACCTCCGTGAGGGCATGTGCCATACTTCCTCTGGTCGGTGTACCAGTAGTAGGGCGTGGGGTCGATTCCCTCCCTCTTGTATCCCTCCAGCAGCTCCTCGGAGTCCCAGATACGCATGGATCCTCCAACGATCTCTCCAACATTTGGCATCAGCACGTCGACCAATTCAGTGAGGCGCTTGTCCTCGCTGCAGCGCTGCATGTAGAAGGACTTGATCTCAGCAGGGAACCTGCAGAGCAGTATGGGTTCATTGATTGTATCTGTCATCACCCTCTCTG GAGCCTCCGGGATGTCCTCTCCAAACTCATAGAAAGT GCCGCCCTCCTTCTTGACATCATGCTGCTT      ]
[+] EMBL CA331344             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               TCATGATGTTTATTACTTGTTCAGCCAACATAAACAGATCCAGCAGGTGAATTGCGAGATGAAGACATGCACCTTCATTAGGCTCCCAACGCCTCAGACAGAAAACAGCTAAAGAGACTAGATTTCAATCGGAATTTAAAGATTTT CACAAATTTCACAGCGACAGAACAGGGGAGTGTGCTCAAGGTCGGCAGCGTTGGATGAAGCGTGGGTACAGGCACACGTCTCGTATGTGATGTCTGTTCAGCAGCCAGGTGAGGAAACGCTCCAGGCCCAGACCATAACCTCCGTGAGGGCATGTGCCATACTTCCTCTGGTCGGTGTACCAGTAGTAGGGCGTGGGGTCGATTCCCTCCCCCTTGTATCCCTCCAGCAGCTCCTCGGAGTCCCAGATACGCATGGATCCTCCAACGATCTCTCCAACATTTGGCATCAGCACGTCGACCGATTCAGTGAGGCGCTTGTCCTCGCTGCAGCGCTGCATGTAGAAGGACTTGATCTCAGCAGGGAACCTGCAGAGCAGTATGGGGTCATTGATTGGATCTGTCATCACCCTCTCTG GAGCCTCCGGGATGTCCTCTCCAAACTCATAGAAAATGGCCGGCCTCCTTCTTGACATCATGCTGCTTTAGCCA]
[+] EMBL CA329561             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ATGATGTTTATTACTTGTTCAGCCAACATAAACAGATCCAGCAGGTGAATTGCGAGATGAAGACATGCACCTTCATTAGGCTCCCAACGCCTCAGACAGAAAACAGCTAAAGAGACTAGATTTCAATCGGAATTTAAAGATTTTAGTCAAATTTCACAGCGACAGAACAGGGGAGTGTGCTCAAGGTCGGCAGCGTTGGATGAAGCGTGGGTACAGGCACACGTCTCGTATGTGATGTCTGTTCAGCAGCCAGGTGAGGAAACGCTCCAGGCCCAGACCATAACCTCCGTGAGGGCATGTGCCATACTTCCTCTGGTCGGTGTACCAGTAGTAGGGCGTGGGGTCGATTCCCTCCCTCTTGTATCCCTCCAGCAGCTCCTCGGAGTCCCAGATACGCATGGATCCTCCAACGATCTCTCCAACATTTGGCATCAGCACGTCGACCGATTCAGTGAGGCGCTTGTCCTCGCTGCAGCGCTGCATGTAGAAGGACTTGATCTCAGCAGGGAACCTGCAGAGCAGAATGGGGTCGGTGATTGTATCTGTCATCACCCTCTCTGAAAGCCTCGGGGATGTCCTCTCCAAA                                                 ]
[+] EMBL CA332061             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  gGATGTTTATTACTTGTTCAGCCAACATAAACAGATCCAGCAGGTGAATTGTGAGATGAAGACATGCACCTTCATTAGGCTCCCAACGCCTCAGACAGAAAACAGCTAAAGAGACTAGATTTCAATCGGAATTTAAAGATTTTAGTCAAATTTCACAGCGACAGAACAGGGGAGTGTGCTCAAGGTCGGCAGCGTTGGATGAAGCGTGGGTACAGGCACACGTCTCGTATGTGATGTCTGTTCAGCAGCCAGGTGAGGAAACGCTCCAGGCCCAGACCATAACCTCCGTGAGGGCATGTGCCATACTTCCTCTGGTCGGTGTACCAGTAGTAGGGCGTGGGGTCGATTCCCTCCCTCTTGTATCCCTCCAGCAGCTCCTCGGAGTCCCAGATACGCATGGATCCTCCAACGATCTCTCCAACATTTGGCATCAGCACGTCGACCGATTCAGTGAGGCGCTTGTCCTCGCTGCAGCGCTGCATGTAGAAGGACTTGATCTCAGCAGGGAACCTGCAGAGCAGTATGGGTTCATTGATTGTATCTGTCATCACCCTCTCTG GAGCCTCCGGGATGTCCTCTCCAAACTCATAGAA                                        ]




>consensus_2792#0
GGACCAATCTGTTTTATTTATCCAATTCCAGTGTTTGAATTTAATAATTACACTGGTTAA
TATCAAGAACTGAGAATACAAACCAGCTAAAGACAATGATCAACAGTCCCACTTCAGGGC
ATTTATTCAGGGTAGAAGCAGGAAGACAGTCAAATATTTGGACATGAGTGGCAGCGCAGA
GTATAGTGATCCCAAAGATTCAAGAATTTTAAACATTAAAGCACATACAGACTGAGATTG
TGTGGTGCCGTTTGATCAATGCACATCAAAATCTAACCTATTTTTGGGCTGAGCGGCAGT
GAAGGCTTTTTTTATCCAAACTAGAGAAGCAACAGTGGTGTGCAGTAAATAAAATGGACT
TTAGTGAAGGTAATGATAAGGTTTGTAAATCATCTCTTCCTCCCTGTCACCGTTAATCTA
CACAAGAATTATCAAGGCATAATTTCAGTCAAATCATGGAGGACAAGATGCGCTAAGATT
CTGCACGTCATTAAGCAAAGGAGCATGAGCATTCCTCTACCGACCTCAGCCAACAGAACC
TTTCTGCTCTGGACTCGTTGACCACATAGTCACTTTCATTTCTTTGGTTTCCCTGGGAGA
TTCAGAGACACCCGGTCATCATGATGTTTATTACTTGTTCAGCCAACATAAACAGATCCA
GCAGGTGAATTGCGAGATGAAGACATGCACCTTCATTAGGCTCCCAACGCCTCAGACAGA
AAACAGCTAAAGAGACTAGATTTCAATCGGAATTTAAAGATTTTAGTCAAATTTCACAGC
GACAGAACAGGGGAGTGTGCTCAAGGTCGGCAGCGTTGGATGAAGCGTGGGTACAGGCAC
ACGTCTCGTATGTGATGTCTGTTCAGCAGCCAGGTGAGGAAACGCTCCAGGCCCAGACCA
TAACCTCCGTGAGGGCATGTGCCATACTTCCTCTGGTCGGTGTACCAGTAGTAGGGCGTG
GGGTCGATTCCCTCCCTCTTGTATCCCTCCAGCAGCTCCTCGGAGTCCCAGATACGCATG
GATCCTCCAACGATCTCTCCAACATTTGGCATCAGCACGTCGACCGATTCAGTGAGGCGC
TTGTCCTCGCTGCAGCGCTGCATGTAGAAGGACTTGATCTCAGCAGGGAACCTGCAGAGC
AGTATGGGGTCATTGATTGTATCTGTCATCACCCTCTCTGGAGCCTCCGGGATGTCCTCT
CCAAACTCATAGAAAGTGCCGGCCTCCTTCTTGACATCATGCTGCTTTAGCCA

consensusID : consensus_2792#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 389
fasta sequence

                              [TTATGGGTTTATTTGCTTTATGTACAACATAAATCACGATAAACAAAAATACATTTCTACATTAAAAGAATGCTAGAACTATCATCTTTTAAATTGAAAACTGTATTTTTGTTTATCCATATGTATTATTCATTCCATAAAGTGGCCCCTGTCATATGGCACCATCTGGTTGAACACCATCTGGTGGTCAGCAGAGGAACTGCAATCCCTCAGAGGCGGCGTTGCTTTCTGTTGTGTTTTAATCAAACTTAGTCTACCTGCAGGTCAGATTACATCATACATTTAAATATTAATATGGGAACCAATACTCCTAAGAAATAAAAGCAGAAACATCTAAAGAGTGTGTATGTTACCAATCTGTTTTATTTATCTAATTCCAGTGTTTGAAT]

[+] EMBL CA332176             [TTATGGGTTTATTTGCTTTATGTACAACATAAATCACGATAAACAAAAATACATTTCTACATTAAAAGAATGCTAGAACTATCATCTTTTAAATTGAAAACTGTATTTTTGTTTATCCATATGTATTATTCATTCCATAAAGTGGCCCCTGTCATATGGCACCATCTGGTTGAACACCATCTGGTGGTCAGCAGAGGAACTGCAATCCCTCAGAGGCGGCGTTGCTTTCTGTTGTGTTTTAATCAAACTTAGTCTACCTGCAGGTCAGATTACATCATACATTTAAATATTAATATGGGAACCAATACTCCTAAGAAATAAAAGCAGAAACATCTAAAGAGTGTGTATGTTACCAATCTGTTTTATTTATCTAATTCCAGTGTTTGAAT]




>consensus_2792#1
TTATGGGTTTATTTGCTTTATGTACAACATAAATCACGATAAACAAAAATACATTTCTAC
ATTAAAAGAATGCTAGAACTATCATCTTTTAAATTGAAAACTGTATTTTTGTTTATCCAT
ATGTATTATTCATTCCATAAAGTGGCCCCTGTCATATGGCACCATCTGGTTGAACACCAT
CTGGTGGTCAGCAGAGGAACTGCAATCCCTCAGAGGCGGCGTTGCTTTCTGTTGTGTTTT
AATCAAACTTAGTCTACCTGCAGGTCAGATTACATCATACATTTAAATATTAATATGGGA
ACCAATACTCCTAAGAAATAAAAGCAGAAACATCTAAAGAGTGTGTATGTTACCAATCTG
TTTTATTTATCTAATTCCAGTGTTTGAAT

consensusID : consensus_2792#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 245
fasta sequence

                              [ACCAAAACTTGGGTCCCGGGCCCCCCCCGAGAGTTTATCCTTCTCCCATCTTTTTTTTCAACAGTCCCACTTCAGGGCATTTATTCAGGGTAGAAGCAGGAAGACAGTCAAATATTTGGACATGAGTGGCAGCGCAGAGTATAGTGATCCCAAAGATTCAAGAATTTTAAACATTAAAGCACATACAGACTGAGATTGTGTGGTGCCGTTTGATCAATGCACATCAAAATCTAACCTATTTTTGG]

[-] EMBL FR0057032            [ACCAAAACTTGGGTCCCGGGCCCCCCCCGAGAGTTTATCCTTCTCCCATCTTTTTTTTCAACAGTCCCACTTCAGGGCATTTATTCAGGGTAGAAGCAGGAAGACAGTCAAATATTTGGACATGAGTGGCAGCGCAGAGTATAGTGATCCCAAAGATTCAAGAATTTTAAACATTAAAGCACATACAGACTGAGATTGTGTGGTGCCGTTTGATCAATGCACATCAAAATCTAACCTATTTTTGG]




>consensus_2792#2
ACCAAAACTTGGGTCCCGGGCCCCCCCCGAGAGTTTATCCTTCTCCCATCTTTTTTTTCA
ACAGTCCCACTTCAGGGCATTTATTCAGGGTAGAAGCAGGAAGACAGTCAAATATTTGGA
CATGAGTGGCAGCGCAGAGTATAGTGATCCCAAAGATTCAAGAATTTTAAACATTAAAGC
ACATACAGACTGAGATTGTGTGGTGCCGTTTGATCAATGCACATCAAAATCTAACCTATT
TTTGG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_2792#0      GGACCAATCTGTTTTATTTATCCAATTCCAGTGTTTGAATTTAATAATTACACTGGTTAA 60
consensus_2792#2      -------------------------------------------ACCAAAACTTGGGTCCC 17
consensus_2792#1      -----TTATGGGTTTATTTGCTTTATGTACAACATAAATCACGATAA--ACAAAAATACA 53
                                                                 *  *  **     *   

consensus_2792#0      TATCAAGAACTGAGAATACAAACCAG-CTAAAGACAATGATCAACAGTCCCACTTCAGGG 119
consensus_2792#2      GGGCCCCCCCCGAGAGTTTATCCTTCTCCCATCTTTTTTTTCAACAGTCCCACTTCAGGG 77
consensus_2792#1      TTTCTACATTAAAAGAATGCTAGAACTATCATCTTTTAAATTGAAAACTGTATTTTTGTT 113
                         *        *                 *         *  * *     * **  *  

consensus_2792#0      CATTTATTCAGGGTAG--AAGCAGGAAGACAGTCA--AATATTTGGACATGAGTGGCAGC 175
consensus_2792#2      CATTTATTCAGGGTAG--AAGCAGGAAGACAGTCA--AATATTTGGACATGAGTGGCAGC 133
consensus_2792#1      TATCCATATGTATTATTCATTCCATAAAGTGGCCCCTGTCATATGGCACCATCTGGTTGA 173
                       **  **      **   *  *   **    * *      ** ***       ***  * 

consensus_2792#0      GCAGAGTATAGTGATCC-CAAAGATTCAAGAATTTTAAACATTAAAGCACATACAGACTG 234
consensus_2792#2      GCAGAGTATAGTGATCC-CAAAGATTCAAGAATTTTAAACATTAAAGCACATACAGACTG 192
consensus_2792#1      ACACCATCTGGTGGTCAGCAGAGGAACTGCAATCCCTCAGAG-GCGGCGT-TGCTTTCTG 231
                       **   * * *** **  ** **   *   ***     * *     **   * *   ***

consensus_2792#0      AGATTGTGTGGTGCCGTTTGATCAA--TGCACATCAAAATCTAACCTATTTTTGGGCTGA 292
consensus_2792#2      AGATTGTGTGGTGCCGTTTGATCAA--TGCACATCAAAATCTAACCTATTTTTGG----- 245
consensus_2792#1      TTGTGTTTTAATCAAACTTAGTCTACCTGCAGGTCAGATTACATCATACATTTAAATATT 291
                         *  * *  *     **  ** *  ****  *** * *  * * **  ***       

consensus_2792#0      GCGGCAGTGAAGGCTTTTTTTATCCAAACTAG--AGAAGCAACAGTGGTGTGCAGTAAAT 350
consensus_2792#2      ------------------------------------------------------------
consensus_2792#1      AATATGGGAACCAATACTCCTAAGAAATAAAAGCAGAAACATCTAAAGAGTGTGTATGTT 351
                                                                                  

consensus_2792#0      AAAATGGACTTTAGTGAAGGTAATGATAAGGTTTGTAAATCATCTCTTCCTCCCTGTCAC 410
consensus_2792#2      ------------------------------------------------------------
consensus_2792#1      ACCAATCTGTTTTATTTATCTAATTCCAGTGTTTGAAT---------------------- 389
                                                                                  

consensus_2792#0      CGTTAATCTACACAAGAATTATCAAGGCATAATTTCAGTCAAATCATGGAGGACAAGATG 470
consensus_2792#2      ------------------------------------------------------------
consensus_2792#1      ------------------------------------------------------------
                                                                                  

consensus_2792#0      CGCTAAGATTCTGCACGTCATTAAGCAAAGGAGCATGAGCATTCCTCTACCGACCTCAGC 530
consensus_2792#2      ------------------------------------------------------------
consensus_2792#1      ------------------------------------------------------------
                                                                                  

consensus_2792#0      CAACAGAACCTTTCTGCTCTGGACTCGTTGACCACATAGTCACTTTCATTTCTTTGGTTT 590
consensus_2792#2      ------------------------------------------------------------
consensus_2792#1      ------------------------------------------------------------
                                                                                  

consensus_2792#0      CCCTGGGAGATTCAGAGACACCCGGTCATCATGATGTTTATTACTTGTTCAGCCAACATA 650
consensus_2792#2      ------------------------------------------------------------
consensus_2792#1      ------------------------------------------------------------
                                                                                  

consensus_2792#0      AACAGATCCAGCAGGTGAATTGCGAGATGAAGACATGCACCTTCATTAGGCTCCCAACGC 710
consensus_2792#2      ------------------------------------------------------------
consensus_2792#1      ------------------------------------------------------------
                                                                                  

consensus_2792#0      CTCAGACAGAAAACAGCTAAAGAGACTAGATTTCAATCGGAATTTAAAGATTTTAGTCAA 770
consensus_2792#2      ------------------------------------------------------------
consensus_2792#1      ------------------------------------------------------------
                                                                                  

consensus_2792#0      ATTTCACAGCGACAGAACAGGGGAGTGTGCTCAAGGTCGGCAGCGTTGGATGAAGCGTGG 830
consensus_2792#2      ------------------------------------------------------------
consensus_2792#1      ------------------------------------------------------------
                                                                                  

consensus_2792#0      GTACAGGCACACGTCTCGTATGTGATGTCTGTTCAGCAGCCAGGTGAGGAAACGCTCCAG 890
consensus_2792#2      ------------------------------------------------------------
consensus_2792#1      ------------------------------------------------------------
                                                                                  

consensus_2792#0      GCCCAGACCATAACCTCCGTGAGGGCATGTGCCATACTTCCTCTGGTCGGTGTACCAGTA 950
consensus_2792#2      ------------------------------------------------------------
consensus_2792#1      ------------------------------------------------------------
                                                                                  

consensus_2792#0      GTAGGGCGTGGGGTCGATTCCCTCCCTCTTGTATCCCTCCAGCAGCTCCTCGGAGTCCCA 1010
consensus_2792#2      ------------------------------------------------------------
consensus_2792#1      ------------------------------------------------------------
                                                                                  

consensus_2792#0      GATACGCATGGATCCTCCAACGATCTCTCCAACATTTGGCATCAGCACGTCGACCGATTC 1070
consensus_2792#2      ------------------------------------------------------------
consensus_2792#1      ------------------------------------------------------------
                                                                                  

consensus_2792#0      AGTGAGGCGCTTGTCCTCGCTGCAGCGCTGCATGTAGAAGGACTTGATCTCAGCAGGGAA 1130
consensus_2792#2      ------------------------------------------------------------
consensus_2792#1      ------------------------------------------------------------
                                                                                  

consensus_2792#0      CCTGCAGAGCAGTATGGGGTCATTGATTGTATCTGTCATCACCCTCTCTGGAGCCTCCGG 1190
consensus_2792#2      ------------------------------------------------------------
consensus_2792#1      ------------------------------------------------------------
                                                                                  

consensus_2792#0      GATGTCCTCTCCAAACTCATAGAAAGTGCCGGCCTCCTTCTTGACATCATGCTGCTTTAG 1250
consensus_2792#2      ------------------------------------------------------------
consensus_2792#1      ------------------------------------------------------------
                                                                                  

consensus_2792#0      CCA 1253
consensus_2792#2      ---
consensus_2792#1      ---

Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr)