cluster # 2802

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Takifugu rubripes
cluster # 2802 cluster # 2802 Sequences # 21 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_2802#0 length = 751 sequences # 17

consensus_2802#1 length = 623 sequences # 2
consensus_2802#2 length = 521 sequences # 2

consensusID : consensus_2802#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 17
consensus length = 751
fasta sequence

                              [AAGACGATGCAAATAAACCAATAGAGAGCACAAAACCATGAAATGAACAATTTGAATAAATTTAGTTCCCATTGAAGCTATTATAATTCAACAATCAGCGTGAAAATCACAGCAATTTTGCACAAGAAATCACTTTTCCGGACTATTCTTTTTATCGTACAGAGATCCATCTTTATTCAAAATGCGTGAGTGCATCTCCATACACATTGGTCAGGCCGGTGTCCAGATCGGCAATGCTTGTTGGGAGCTTTACTGCCTGGAGCACGGGATCCAGCCCGACGGGCTGATGCCCAGTGACAAGACCGTTGGAGGAGGCGACGATTCTTTCAACACCTTCTTTAGTGAGACAGGAGCAGG-AAAACACGTCCCCAGAGCTGTTTTTGTGGACCTGGAACCAACTGTGATAGATGAGGTGCGTACTGGTA-CCTACCGCCAGCTCTTTCACCCTGAGCAGCTGATCACTGGTAAGGAGGATGCTGCCAACAACTACGCCCGTGGACACTACACCGTCGGAAAAGAGCTCATCGATGTCGTGCTGGACAGAACCCGCAAACTGACTGACCAGTGCACCGGCCTTCAGGGCTTTCTGGTGTTCCACAGCTTTGGAGGTGGCACTGGTTCTGGTTTTACCTCCCTGCTGATGGAGCGACTGTCCGTCGACTACGGCAAGAAGTCCAAGCTTGAGTTCTCAGTCTACCCGGCTCCCCAAGTGCCCACTGCTGTGGTGGAGCCCTATCACTCCATCCTGACC]

[+] EMBL FR0060456            [AAGACGATGCAAATAAACCAATAGAGAGCACAAAACCATGAAATGAACAATTTGAATAAATTTAGTTCCCATTGAAGCTATTATAATTCAACAATCAGCGTGAAAATCACAGCAATTTTGCACAAGAAATCACTTTTCCGGACTATTCTTTTTATCGTACAGAGATCCATCTTTATTCAAAATGCGTGAGTGCATCTCCATACACATTGGTCAGGCCGGTGTCCAGATCGGCAATGCTTGTTGGGAGCTTTACTGCCTGGAGCACGGGATCCAGCCCGACGGGCTGATGCCCAGTGACAAGACCGTTGGAGGAGGCGACGATTCTTTCAACACCTTCTTTAGTGAGACAGGAGCAGGAAAAACACG                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CA590689             [                                                           ATTTAGTTCCCATTGAAGCTATTATAATTCAACAATCAGCGTGAAAATCACAGCAATTTTGCACAAGAAATCACTTTTCCGGACTATTCTTTTTATCGTACAGAGATCCATCTTTATTCAAAATGCGTGAGTGCATCTCCATACACATTGGTCAGGCCGGTGTCCAGATCGGCAATGCTTGTTGGGAGCTTTACTGCCTGGAGCACGGGATCCAGCCCGACGGGCTGATGCCCAGTGACAAGACCGTTGGAGGAGGCGACGATTCTTTCAACACCTTCTTTAGTGAGACAGGAGCAGG AAAACACGTCCCCAGAGCTGTTTTTGTGGACCTGGAACCAACTGTGATAGATGAGGTGCGTACTGGTA CCTACCGCCAGCTCTTTCACCCTGAGCAGCTGATCACTGGTAAGGAGGATGCTGCCAACAACTACGCCCGTGGACACTACACCGTCGGAAAAGAGCTCATCGATGTCGTGCTGGACAGAACCCGCAAACTGACTGACCAGTGCACCGGCCTTCAGGGCTTTCTGGTGTTCCACAGCTTTGGAGGTGGCACTGGTTCTGGTTTTACCTCCCTGCTGATGGAGCGACTGTCCGTCGACTACGGCAAGAAGTCCAAGCTTGAGTTC                                                               ]
[+] EMBL CA332834             [                                                                 TTCCCATTGAAGCTATTATAATTCAACAATCAGCGTGAAAATCACAGCAATTTTGCACAAGAAATCACTTTTCCGGACTATTCTTTTTATCGTACAGAGATCCATCTTTATTCAAAATGCGTGAGTGCATCTCCATACACATTGGTCAGGCCGGTGTCCAGATCGGCAATGCTTGTTGGGAGCTTTACTGCCTGGAGCACGGGATCCAGCCCGACGGGCTGATGCCCAGTGACAAGACCGTTGGAGGAGGCGACGATTCTTTCAACACCTTCTTTAGTGAGACAGGAGCAGG AAAACACGTCCCCAGAGCTGTTTTTGTGGACCTGGAACCAACTGTGATAGATGAGGTGCGTACTGGTA CCTACCGCCAGCTCTTTCACCCTGAGCAGCTGATCACTGGTAAGGAGGATGCTGCCAACAACTACGCCCGTGGACACTACACCGTCGGAAAAGAGCTCATCGATGTCGTGCTGGACAGAACCCGCAAACTGACTGACCAGTGCACCGGCCTTCAGGGCTTTCTGGTGTTCCACAGCTTTGGAGGTGGCACTGGTTCTGGTTTTACCTCCCTGCTGATGGAGCGACTGGCCCTCGACTACGGCAAGAAGTCCAAGCTTGAG                                                                  ]
[+] EMBL CA590353             [                                                                 TTCCCATTGAAGCTATTATAATTCAACAATCAGCGTGAAAATCACAGCAATTTTGCACAAGAAATCACTTTTCCGGACTATTCTTTTTATCGTACAGAGATCCATCTTTATTCAAAATGCGTGAGTGCATCTCCATACACATTGGTCAGGCCGGTGTCCAGATCGGCAATGCTTGTTGGGAGCTTTACTGCCTGGAGCACGGGATCCAGCCCGACGGGCTGATGCCCAGTGACAAGACCGTTGGAGGAGGCGACGATTCTTTCAACACCTTCTTTAGTGAGACAGGAGCAGG AAAACACGTCCCCAGAGCTGTTTTTGTGGACCTGGAACCAACTGTGATAGATGAGGTGCGTACTGGTA CCTACCGCCAGCTCTTTCACCCTGAGCAGCTGATCACTGGTAAGGAGGATGCTGCCAACAACTACGCCCGTGGACACTACACCGTCGGAAAAGAGCTCATCGATGTCGTGCTGGACAGAACCCGCAAACTGACTGACCAGTGCACCGGCCTTCAGGGCTTTCTGGTGTTCCACAGCTTTGGAGGTGGCACTGGTTCTGGTTTTACCTCCCTGCTGATGGAGCGACTGTCCGTCGACTACGGCAAGAAATCCAAGCTTGAG                                                                  ]
[+] EMBL CA332808             [                                                                 TTCCCATTGAAGCTATTATAATTCAACAATCAGCGTGAAAATCACAGCAATTTTGCACAAGAAATCACTTTTCCGGACTATTCTTTTTATCGTACAGAGATCCATCTTTATTCAAAATGCGTGAGTGCATCTCCATACACATTGGTCAGGCCGGTGTCCAGATCGGCAATGCTTGTTGGGAGCTTTACTGCCTGGAGCACGGGATCCAGCCCGACGGGCTGATGCCCAGTGACAAGACCGTCGGAGGAGGCGACGATTCTTTCAACACCTTCTTTAGTGAGACAGGAGCAGG AAAACACGTCCCCAGAGCTGTTTTTGTGGACCTGGAACCAACTGTGATAGATGAGGTGCGTACTGGTA CCTACCGCCAGCTCTTTCACCCTGAGCAGCTGATCACTGGTAAGGAGGATGCTGCCAACAACTACGCCCGTGGACACTACACCGTCGGAAAAGAGCTCATCGATGTCGTGCTGGACAGAACCCGCAAACTGACTGACCAGTGCACCGGCCTTCAGGGCTTTCTGGTGTTCCACAGCTTTGGAGGTGGCACTGGTTCTGGTTTTACCTCCCTGCTGATGGAGCGACTGTCCGTCGACTACGGCAAGAAGTCCAAGCTT                                                                     ]
[+] EMBL CA332972             [                                                                 TTCCCATTGAAGCTATTATAATTCAACAATCAGCGTGAAAATCACAGCAATTTTGCACAAGAAATCACTTTTCCGGACTATTCTTTTTATCGTACAGAGATCCATCTTTATTCAAAATGCGTGAGTGCATCTCCATACACATTGGTCAGGCCGGTGTCCAGATCGGCAATGCTTGTTGGGAGCTTTACTGCCTGGAGCACGGGATCCAGCCCGACGGGCTGATGCCCAGTGACAAGACCGTTGGAGGAGGCGACGATTCTTTCAACACCTTCTTTAGTGAGACAGGAGCAGG AAAACACGTCCCCAGAGCTGTTTTTGTGGACCTGGAACCAACTGTGATAGATGAGGTGCGTACTGGTA CCTACCGCCAGCTCTTTCACCCTGAGCAGCTGATCACTGGTAAGGAGGATGCTGCCAACAACTACGCCCGTGGACACTACACCGTCGGAAAAGAGCTCATCGATGTCGTGCTGGACAGAACCCGCAAACTGACTGACCAGTGCACCGGCCTTCAGGGCTTTCTGGTGTTCCACAGCTTTGGAGGTGGCACTGGTTCTGGTTTTACCTCCCTGCTGATGGAGCGACTGTCCGTCGACTACGGCAAGAAGTCCAAG                                                                        ]
[+] EMBL CA332946             [                                                                 TTCCCATTGAAGCTATTATAATTCAACAATCAGCGTGAAAATCACAGCAATTTTGCACAAGAAATCACTTTTCCGGACTATTCTTTTTATCGTACAGAGATCCATCTTTATTCAAAATGCGTGAGTGCATCTCCATACACATTGGTCAGGCCGGTGTCCAGATCGGCAATGCTTGTTGGGAGCTTTACTGCCTGGAGCACGGGATCCAGCCCGACGGGCTGATGCCCAGTGACAAGACCGTCGGAGGAGGCGACGATTCTTTCAACACCTTCTTTAGTGAGACAGGAGCAGG AAAACACGTCCCCAGAGCTGTTTTTGTGGACCTGGAACCAACTGTGATAGATGAGGTGCGTACTGGTA CCTACCGCCAGCTCTTTCACCCTGAGCAGCTGATCACTGGTAAGGAGGATGCTGCCAACAACTACGCCCGTGGACACTACACCGTCGGAAAAGAGCTCATCGATGTCGTGCTGGACAGAACCCGCAAACTGACTGACCAGTGCACCGGCCTTCAGGGCTTTCTGGTGTTCCACAGCTTTGGAGGTGGCACTGGTTCTGGTTTTACCTCCCTGCTGATGGAGCGACTGTCCGTCGACTACGGCAAGAAGTCCAAG                                                                        ]
[+] EMBL FR0061067            [                                                                                                                 AATTTTGCACAAGAAATCACTTTTCCGGACTATTCTTTTTATCGTACAGAGATCCATCTTTATTCAAAATGCGTGAGTGCATCTCCATACACATTGGTCAGGCCGGTGTCCAGATCGGCAATGCTTGTTGGGAGCTTTACTGCCTGGAGCACGGGATCCAGCCCGACGGCCTGATGCCCAGTGACAAGACCGTTGGAGGAGGCGACGATTCTTTCAACACCTTCTTTAGTGAGACAGGAGCAGG AAAACACGTCCCCAGAGCTGTTTTTGTGGACCTGGGACCAACTGTGATAGATGAGGTGCG ACTGGTA CCTACCGCCAGCTCTTTCACC                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL FR0060904            [                                                                                                                                     TTTTCCGGACTATTCTTTTTATCGTACAGAGATCCATCTTTATTCAAAATGCGTGAGTGCATCTCCATACACATTGGTCAGGCCGGTGTCCAGATCGGCAATGCTTGTTGGGAGCTTTACTGCCTGGAGCACGGGATCCAGCCCGACGGGCTGATGCCCAGTGACAAGACCGTTGGAGGAGGCGACGATTCTTTCAACACCTTCTTTAGTGAGACAGGAGCAGG AAAACACGTCCCCAGGGCTGTTTTTGTGGACCTGGAACCAACTGTGAAAGAGGAGGTGCGTACTGGGA CCTACCGGCAGCTCTTTCACCCTGAGCAGTTGATCACTGGGAAGGAGGAT                                                                                                                                                                                                                                                                                    ]
[+] EMBL FR0060242            [                                                                                                                                       TTCCGGACTATTCTTTTTATCGTACAGAGATCCATCTTTATTCAAAATGCGTGAGTGCATCTCCATACACATTGGTCAGGCCGGTGTCCAGATCGGCAATGCTTGTTGGGAGCTTTACTGCCTGGAGCACGGGATCCAGCCCGACGGGCTGATGCCCAGTGACAAGACCGTTGGAGGAGGCGACGATTCTTTCAACACCTTCTTTAGTGAGACAGGAGCAGG AAAACACGTCCCCAGAGCTGTTTTTGTGGACCTGGAACCAACTGTGATAGATGAGGTGCGTACTGGTA CCTACCGCCAGCTCTTTCACCCTGAGCAGCTGATCACTGGTAAGGAGGATGCTGCCAACAACTACGCCCGTGGACACTACACCGTCGGAAAA                                                                                                                                                                                                                                          ]
[+] EMBL FR0061028            [                                                                                                                                        TCCGGACTATTCTTTTTATCGTACAGAGATCCATCTTTATTCAAAATGCGTGAGTGCATCTCCATACACATTGGTCAGGCCGGTGTCCAGATCGGCAATGCTTGTTGGGAGCTTTACTGCCTGGAGCACGGGATCCAGCCCGACGGGCTGATGCCCAGTGACAAGACCGTTGGAGGAGGCGACGATTCTTTCAACACCTTCTTTAGTGAGACAGGAGCAGG AAAACACGTCCCCAGAGCTGTTTTTGTGGACCTGGAACCAACTGTGATAGATGAGGGGCGTACTGGGACCCTACCGCCAGCTCTT                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL FR0060777            [                                                                                                                                        TCCGGACTATTCTTTTTATCGTACAGAGATCCATCTTTATTCAAAATGCGTGAGTGCATCTCCATACACATTGGTCAGGCCGGCGTCCAGATCGGCAATGCTTGTTGGGAGCTTTACTGCCTGGAGCACGGGATCCAGCCCGAC GGCTGATGCCCAGTGACAAGACCGTTGGAGGAGGCGACGATTCTTTCAACACCTTCTTTAGTGA                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL FR0060439            [                                                                                                                                          CGGACTATTCTTTTTATCGTACAGAGACCCATCTTTATTCAAAATGCGTGAGTGCATCTCCATACACATTGGTCAGGCCGGTGTCCAGATCGGCAATGCTTGTTGGGAGCTTTACTGCCTGGAGCACGGGATCCAGCCCGACGGGCTGATGCCCAGTGACAAGACCGTTGGAGGAGGCGACGATTCTTTCAACACCTTCTTTAGTGAGACAGGAGCAGG AAAACACGTCCCCAGAGCTGTTTTTGTGGACCTGGAACCAACTGTGATAGATGAGGTGCGTACTGGGA CCTACCGCCAGCTCTTTCACCCTGAGCAGCTG                                                                                                                                                                                                                                                                                                      ]
[+] EMBL FR0060465            [                                                                                                                                                  TCTTTTTATCGTACAGAGATCCATCTTTATTCAAAATGCGTGAGTGCATCTCCATACACATTGGTCAGGCCGGTGTCCAGATCGGCAATGCTTGTTGGGAGCTTTACTGCCTGGAGCACGGGATCCAGCCCGACGGGCTGATGCCCAGTGACAAGACCGTTGGAGGAGGCGACGATTCTTTCAACACCTTCTTTAGTGAGACAGGAGCAGG AAAACACGTCCCCAGGGCTGTTTTTGTGGACCTGGAACCAACTGTGATAGATGAGGTGCGTACTGGGA CCTACCGCCAGCTCTTTCACCC                                                                                                                                                                                                                                                                                                                ]
[+] EMBL FR0061019            [                                                                                                                                                            GGACAGAGATCCATCTTTATTCAAAATGCGTGAGTGCATCTCCATACACATTGGTCAGGCCGGTGTCCAGATCGGCAATGCTTGTTGGGAGCTTTACTGCCTGGAGCACGGGATCCAGCCCGACGGGTTGATGCCCAGTGACAAGACCGTTGGAGGAGGCGACGATTCTTTCAACACCTTCTTTAGTGAGACAGGAGCAGG AAAACACGTCCCCAGGGCTGGTTTTGg                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL FR0060187            [                                                                                                                                                              ACAGAGATCCATCTTTATTCAAAATGCGTGAGTGCATCTCCATACACATTGGTCAGGCCGGTGTCCAGATCGGCAATGCTTGTTGGGAGCTTTACTGCCTGGAGCACGGGATCCAGCCCGACGGGCTGATGCCCAGTGACAAGACCGTTGGAGGAGGCGACGATTCTTTCAACACCTTCTTTAGTGAGACAGGAGCANG ANAACACGTCCCCAGAGCTGTTTTTGTGGACCTG                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CA590661             [                                                                                                                                                                                                             ATTGGTCAGGCCGGTGTCCAGATCGTTTATGCCTGTTGGGAGCTTTACTGCCTGGAGCACGGGATCCAGCCCGACGGGCTGATGCCCAGTGACAAGACCGTTGGAGGAGGCGACGATTCTTTCAACACCTTCTTTAGTGAGACAGGAGCAGG AAAACACGTCCCCAGGGCTGTTTTTGTGGACCTGGAACCAACTGTGATAGATGAGGTGCGTACTGGTA CCTACCGCCATTCCTCTCTCCCTGAGCAGCTGATCACTGGTAAGGAGGATGCTGCCAACAACTACGCCCGTGGACACTACACCGTCGGAAAAGAGCTCATCGATGTCGTGCTGGACAGAACCCGCAAACTGACTGACCAGTGCACCGGCCTTCAGGGCTTTCTGGTGTTCCACAGCTTTGGAGGTGGCACTGGTTCTGGTTTTACCTCCCTGCTGATGGAGCGACTGTCCGTCGACTACGGCAAGAAGTCCAAGCTTGAGTTCTCAGTCTACCCGGCTCCCCAAGTGCCCACTGCTGTGGTGGAGCCCTATCACTCCATCCTGACC]




>consensus_2802#0
AAGACGATGCAAATAAACCAATAGAGAGCACAAAACCATGAAATGAACAATTTGAATAAA
TTTAGTTCCCATTGAAGCTATTATAATTCAACAATCAGCGTGAAAATCACAGCAATTTTG
CACAAGAAATCACTTTTCCGGACTATTCTTTTTATCGTACAGAGATCCATCTTTATTCAA
AATGCGTGAGTGCATCTCCATACACATTGGTCAGGCCGGTGTCCAGATCGGCAATGCTTG
TTGGGAGCTTTACTGCCTGGAGCACGGGATCCAGCCCGACGGGCTGATGCCCAGTGACAA
GACCGTTGGAGGAGGCGACGATTCTTTCAACACCTTCTTTAGTGAGACAGGAGCAGGAAA
ACACGTCCCCAGAGCTGTTTTTGTGGACCTGGAACCAACTGTGATAGATGAGGTGCGTAC
TGGTACCTACCGCCAGCTCTTTCACCCTGAGCAGCTGATCACTGGTAAGGAGGATGCTGC
CAACAACTACGCCCGTGGACACTACACCGTCGGAAAAGAGCTCATCGATGTCGTGCTGGA
CAGAACCCGCAAACTGACTGACCAGTGCACCGGCCTTCAGGGCTTTCTGGTGTTCCACAG
CTTTGGAGGTGGCACTGGTTCTGGTTTTACCTCCCTGCTGATGGAGCGACTGTCCGTCGA
CTACGGCAAGAAGTCCAAGCTTGAGTTCTCAGTCTACCCGGCTCCCCAAGTGCCCACTGC
TGTGGTGGAGCCCTATCACTCCATCCTGACC

consensusID : consensus_2802#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 623
fasta sequence

                              [GACGCTTAAGGACCTGACTGTTGGAGGACCAGATTTTTTTCTTCATCTTGTTGAGATCGGAATTCAACATGCGTGAGTGCATCTCCATACATGTAGGTCAGGCTGGGGTCCAGATCGGCAATGCTTGTTGGGAGCTTTACTGTCTGGAGCACGGGATCCAGCCAGACGGGCAGATGCCCAGTGACAAGACCGTTGGAGGAGGCGACGATTCATTCAACACCTTCTTTAGTGAGACAGGAGCAGGAAAACACGTCCCCAGAGCTGTTTTTGTGGACCTGGAACCATCTGTGATAGATGAGGTACGTAGTGGTACCTACCGCCAGCTGTTTCACCCTGAGCAGCTGATCACTGGTAAGGAGGATGCTGCCAACAACTACGCCCGAGGACACTACACCGTCGGAAAAGAGCTCATCGATGTAGTGCTGGACAGAATCCGCAAACTGACTGACCAGTGCACCGGCCTTCAGGGCTTTCTGGTGTTCCACAGCTTTGGAGGTGGCACTGGTTCTGGTTTTACCTCCCTGCTGATGGAGCGACTGTCCGTCGACTACGGCAAGAAGTCCAAGCTTGAGTTCTCAGTCTACCCAGCTCCCCAGGTGTCCACTGCTGTGGTGGAGCCCTAC]

[+] EMBL BU807183             [GACGCTTAAGGACCTGACTGTTGGAGGACCAGATTTTTTTCTTCATCTTGTTGAGATCGGAATTCAACATGCGTGAGTGCATCTCCATACATGTAGGTCAGGCTGGGGTCCAGATCGGCAATGCTTGTTGGGAGCTTTACTGTCTGGAGCACGGGATCCAGCCAGACGGGCAGATGCCCAGTGACAAGACCGTTGGAGGAGGCGACGATTCTTTCAACACCTTCTTTAGTGAGACAGGAGCAGGAAAACACGTCCCCAGAGCTGTTTTTGTGGACCTGGAACCATCTGTGATAGATGAGGTACGTAGTGGTACCTACCGCCAGCTGTTTCACCCTGAGCAGCTGATCACTGGTAAGGAGGATGCTGCCAACAACTACGCCCGAGGACACTACACCGTCGGAAAAGAGCTCATCGATGTCGTGCTGGACAGAATCCGCAAACTGACTGACCAGTGCACCGGCCTTCAGGGCTTTCTGGTGTTCCACAGCTTTGGAGGTGGCACTGGTTCTGGTTTTACCTCCCTGCTGATGGAGCGACTGTCCGTCGACTACGGCAAGAAGTCCAAGCTTGAGTTCTCAGTCTACCCAGCTCCCCAGGTGTCCACTGCTGTGGTGGAGCCCTAC]
[+] EMBL CA330757             [                                           CATCTTGTTGAGATCGGAATTCAACATGCGTGAGTGCATCTCCATACATGTAGGTCAGGCTGGGGTCCAGATCGGCAATGCTTGTTGGGAGCTTTACTGTCTGGAGCACGGGATCCAGCCAGACGGGCAGATGCCCAGTGACAAGACCGTTGGAGGAGGCGACGATTCATTCAACACCTTCTTTAGTGAGACAGGAGCAGGAAAACACGTCCCCAGAGCTGTTTTTTTGGACCTGGAACCATCTGTGATAGATGAGGTACGTAGTGGTACCTACCGCCAGCTGTTTCACCCTGAGCAGCTGATCACTGGTAAGGAGGATGCTGCCAACAACTACGCCCGTGGACACTACACCGTCGGAAAAGAGCTCATCGATGTAGTGCTGGACAGAATCCGCAAACTGACTGACCAGTGCACTGGCCTTCAGGGCTTTCTGGTGTTCCACAG                                                                                                                                        ]




>consensus_2802#1
GACGCTTAAGGACCTGACTGTTGGAGGACCAGATTTTTTTCTTCATCTTGTTGAGATCGG
AATTCAACATGCGTGAGTGCATCTCCATACATGTAGGTCAGGCTGGGGTCCAGATCGGCA
ATGCTTGTTGGGAGCTTTACTGTCTGGAGCACGGGATCCAGCCAGACGGGCAGATGCCCA
GTGACAAGACCGTTGGAGGAGGCGACGATTCATTCAACACCTTCTTTAGTGAGACAGGAG
CAGGAAAACACGTCCCCAGAGCTGTTTTTGTGGACCTGGAACCATCTGTGATAGATGAGG
TACGTAGTGGTACCTACCGCCAGCTGTTTCACCCTGAGCAGCTGATCACTGGTAAGGAGG
ATGCTGCCAACAACTACGCCCGAGGACACTACACCGTCGGAAAAGAGCTCATCGATGTAG
TGCTGGACAGAATCCGCAAACTGACTGACCAGTGCACCGGCCTTCAGGGCTTTCTGGTGT
TCCACAGCTTTGGAGGTGGCACTGGTTCTGGTTTTACCTCCCTGCTGATGGAGCGACTGT
CCGTCGACTACGGCAAGAAGTCCAAGCTTGAGTTCTCAGTCTACCCAGCTCCCCAGGTGT
CCACTGCTGTGGTGGAGCCCTAC

consensusID : consensus_2802#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 521
fasta sequence

                              [GTTCCCATTGAAGCTATTATAATTCAACAATCAGCGTGGTAAGATATTGGGGGAAAATATTGAATATTTTGTGCACCTCTGCATGTTACTCATTCATGGTATGTCCTACTGTGGGTAGTAGGATGTACAGATGCTAAAAAAAATCAAAATCATGTGTGTGGGGGGTTCTGTACTGTTTGGCTAAACACAGTACTGATGAATGTGGATTGAGATAAAACATTTGTCGGTAACTATTTTGATGGAAAAAAAACAATCAACAGAAAAGTACTGTTTGCTCATTGTCATTTTGTCCTTCATTTTGACATTCCTCTCTATATCCATCTTTTAGAAAATCACAGCAATTTTGCACAAGAAATCACTTTTCCGGACTATTCTTTTTATCGTACAGAGATCCATCTTTATTCAAAATGGTAAGTCAAAAGCTACTGTCATTTCTCATTTTTATTTTAGATTTAAAGTAAATGAGTGGCTCATGGATTAGGCAACTAATCTTTAGGTGTAACATGAAACTTGTGACCTCC]

[+] EMBL CA590567             [GTTCCCATTGAAGCTATTATAATTCAACAATCAGCGTGGTAAGATATTGGGGGAAAATATTGAATATTTTGTGCACCTCTGCATGTTACTCATTCATGGTATGTCCTACTGTGGGTAGTAGGATGTACAGATGCTAAAAAAAATCAAAATCATGTGTGTGGGGGGTTCTGTACTGTTTGGCTAAACACAGTACTGATGAATGTGGATTGAGATAAAACATTTGTCGGTAACTATTTTGATGGAAAAAAAACAATCAACAGAAAAGTACTGTTTGCTCATTGTCATTTTGTCCTTCATTTTGACATTCCTCTCTATATCCATCTTTTAGAAAATCACAGCAATTTTGCACAAGAAATCACTTTTCCGGACTATTCTTTTTATCGTACAGAGATCCATCTTTATTCAAAATGGTAAGTCAAAAGCTACTGTCATTTCTCATTTTT                                                                              ]
[+] EMBL CA590503             [ TTCCCATTGAAGCTATTATAATTCAACAATCAGCGTGGTAAGATATTGGGGGAAAATATTGAATATTTTGTGCACCTCTGCATGTTACTCATTCATGGTATGTCCTACTGTGGGTAGTAGGATGTACAGATGCTAAAAAAAATCAAAATCATGTGTGTGGGGGGTTCTGTACTGTTTGGCTAAACACAGTACTGATGAATGTGGATTGAGATAAAACATTTGTCGGTAACTATTTTGATGGAAAAAAAACAATCAACAGAAAAGTACTGTTTGCTCATTGTCATTTTGTCCTTCATTTTGACATTCCTCTCTATATCCATCTTTTAGAAAATCACAGCAATTTTGCACAAGAAATCACTTTTCCGGACTATTCTTTTTATCGTACAGAGATCCATCTTTATTCAAAATGGTAAGTCAAAAGCTACTGTCATTTCTCATTTTTATTTTAGATTTAAAGTAAATGAGTGGCTCATGGATTAGGCAACTAATCTTTAGGTGTAACATGAAACTTGTGACCTCC]




>consensus_2802#2
GTTCCCATTGAAGCTATTATAATTCAACAATCAGCGTGGTAAGATATTGGGGGAAAATAT
TGAATATTTTGTGCACCTCTGCATGTTACTCATTCATGGTATGTCCTACTGTGGGTAGTA
GGATGTACAGATGCTAAAAAAAATCAAAATCATGTGTGTGGGGGGTTCTGTACTGTTTGG
CTAAACACAGTACTGATGAATGTGGATTGAGATAAAACATTTGTCGGTAACTATTTTGAT
GGAAAAAAAACAATCAACAGAAAAGTACTGTTTGCTCATTGTCATTTTGTCCTTCATTTT
GACATTCCTCTCTATATCCATCTTTTAGAAAATCACAGCAATTTTGCACAAGAAATCACT
TTTCCGGACTATTCTTTTTATCGTACAGAGATCCATCTTTATTCAAAATGGTAAGTCAAA
AGCTACTGTCATTTCTCATTTTTATTTTAGATTTAAAGTAAATGAGTGGCTCATGGATTA
GGCAACTAATCTTTAGGTGTAACATGAAACTTGTGACCTCC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_2802#0      AAGACGATGCAAATAAACCAATAGAGAGCACAAAACCATGAAATGAACAATTTGAATAAA 60
consensus_2802#1      ------------------------------------------------------------
consensus_2802#2      ------------------------------------------------------------
                                                                                  

consensus_2802#0      TTTAGTTCCCATTGAAGCTATTATAATTCAACAATCAGCGTGAAAATCACAGCAATTTTG 120
consensus_2802#1      --------------------------------------------------GACGCTTAAG 10
consensus_2802#2      ------------------------------------------------------------
                                                                                  

consensus_2802#0      CACAAGAA-ATCACTTTTCCGGACTATTCTTTTTATCGTACAGAGATCCATCTTTATTCA 179
consensus_2802#1      GACCTGACTGTTGGAGGACCAGATTTTTTTCTTCATCTTGTTGAGATCGGA----ATTCA 66
consensus_2802#2      ----------------GTTCCCATTGAAGCTATTATAATTCAACAATCAGCGT---GGTA 41
                                         *  * *       * **  *      ***           *

consensus_2802#0      AAATGCGTGAGTGCATCTCCATACACATTGGTCAGGCCGGTGTCCAGATCGGCAATGCTT 239
consensus_2802#1      ACATGCGTGAGTGCATCTCCATACATGTAGGTCAGGCTGGGGTCCAGATCGGCAATGCTT 126
consensus_2802#2      AGATATTGGGGGAAAATATTGAATATTTTGTGCACCTCTGCATGTTACTCATTCATGGT- 100
                      * **    * *   *       * *  * *  **     *  *     **    *** * 

consensus_2802#0      GTTGGGAGCTTTACTGCCTGGAGCACGGGATCCAGCCCGACGGGCTGATGCCCAGTGACA 299
consensus_2802#1      GTTGGGAGCTTTACTGTCTGGAGCACGGGATCCAGCCAGACGGGCAGATGCCCAGTGACA 186
consensus_2802#2      -----ATGTCCTACTGTGGGTAGTAGGATGTACAGAT-GCTAAAAAAAATCAAAATCATG 154
                             *   *****   * ** * *   * ***   *        *  *  * * *  

consensus_2802#0      AGACCGTTGGAGGAGGCGACGATTCTTTCAACACCTTCTTTAGTGAGACAGGAGCAGG-A 358
consensus_2802#1      AGACCGTTGGAGGAGGCGACGATTCATTCAACACCTTCTTTAGTGAGACAGGAGCAGG-A 245
consensus_2802#2      TGTGTGGGGGGTTCTGTACTGTTTGGCTAAACACAGTACTGATGAATGTGGATTGAGATA 214
                       *   *  **     *    * **   * *****  *  * *   *    *    **  *

consensus_2802#0      AAACACGTCCCCAGAGCTGTTTTTGTGGACCTGGAACCAACTGTGATAGATGAGGTGCGT 418
consensus_2802#1      AAACACGTCCCCAGAGCTGTTTTTGTGGACCTGGAACCATCTGTGATAGATGAGGTACGT 305
consensus_2802#2      AAACATTTGTCGGTAACTATTTTGATGGAAAAAAAACAATC---AACAGA-AAAGTACTG 270
                      *****  *  *   * ** ****  ****     *** * *    * ***  * ** *  

consensus_2802#0      ACTGGTACCTACCGCCAGCTCTTTCACCCTGAGCAGCTGATC---ACTGGTAAGGAGGAT 475
consensus_2802#1      AGTGGTACCTACCGCCAGCTGTTTCACCCTGAGCAGCTGATC---ACTGGTAAGGAGGAT 362
consensus_2802#2      TTTGCTCATTGTCATTTTGTCCTTCATTTTGACATTCCTCTCTATATCCATCTTTTAGAA 330
                        ** *   *  *      *  ****   ***    *   **   *    *      ** 

consensus_2802#0      GCTGCCAACAACTACGCCCGTGGACACTACACCGTCGGAAAAGAGCTCATCGATGTCGTG 535
consensus_2802#1      GCTGCCAACAACTACGCCCGAGGACACTACACCGTCGGAAAAGAGCTCATCGATGTAGTG 422
consensus_2802#2      AATCACAGCAATTTTGCACAAGAA-ATCACTTTTCCGGACTA----TTCTTTTTATCGTA 385
                        *  ** *** *  ** *  * * *  **     ****  *    *  *   * * ** 

consensus_2802#0      CTGGACAGAACCCGCAAACTGACTGACCAGTGCACCGGCCTTCAGGGCTTTCTGGTGTTC 595
consensus_2802#1      CTGGACAGAATCCGCAAACTGACTGACCAGTGCACCGGCCTTCAGGGCTTTCTGGTGTTC 482
consensus_2802#2      CAGAGATCCATCTTTATTCAAAATGGTAAGT-----------CAAAAGCTACTGTCATTT 434
                      * *      * *   *  *  * **   ***           **     * ***   ** 

consensus_2802#0      CACAGCTTTGGAGGTGGCACTGGTTCTGGTTTTACCTCCCTGCTGATGGAGCGACTGTCC 655
consensus_2802#1      CACAGCTTTGGAGGTGGCACTGGTTCTGGTTTTACCTCCCTGCTGATGGAGCGACTGTCC 542
consensus_2802#2      CTCATTTTT--ATTTTAGATTTAAAGTAAATG-AGTGGCTCATGGATTAGGCAACTAATC 491
                      * **  ***  *  *   * *     *   *  *    *     ***   ** ***   *

consensus_2802#0      GTCGACTACGGCAAGAAGTCCAAGCTTGAGTTCTCAGTCTACCCGGCTCCCCAAGTGCCC 715
consensus_2802#1      GTCGACTACGGCAAGAAGTCCAAGCTTGAGTTCTCAGTCTACCCAGCTCCCCAGGTGTCC 602
consensus_2802#2      TTTAGGTGTAACATGAAACTTG----TGACCTCC-------------------------- 521
                       *    *    ** ***         ***  **                           

consensus_2802#0      ACTGCTGTGGTGGAGCCCTATCACTCCATCCTGACC 751
consensus_2802#1      ACTGCTGTGGTGGAGCCCTAC--------------- 623
consensus_2802#2      ------------------------------------

Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr)