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These datas are free for academic use only, please contact me for any other use. Takifugu rubripes see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2836#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 852 fasta sequence
[GAATGGGGCATTGTATTCCTGAAACTAAAGCCACGATCCGGTTCTTAGCCCCTTTCTTATATAGGGATCAAACATTGGCTCCTTGCGGCTTTTCAATCAAAGGGTAACAACAATTGAAGAACTTGCCAAGCAGGTTACATGTTTCTTGTTTTTGATCCCTTATTTCTTTTTTCTATGGGAAATATCAGATGGGGCTTTATTTTCCCAGTTGGGCTCTGACAGAACCAGGTCTTGCCAGGTTTTAAACTGAGGAAAGAATTGCCGTGCTGAATTCCATTTTTACTACAGCCGTTAGTTTAGCCGAGGCTCCTATATGTTCAATTTCCCAAAAGAGTGAATTCCTTTCAGACTGGTGAACTGCGCCTCCGGAGTGGCCGGCTGTTCATGAAGTCTGCCTAAGGTATCTTCTGCTCAACACCTGCATTTTAAGTGTGCTGTAACATGGACTAATCTTGTTTAATGATCGGAAAATGTAACTTGGTTTCCCCAGAGTAAAATTTCAGCCGGGAACGATTTTGTACTTTATGTTCTTTGTATGATCAATATTTTTTCTCTGTCAGTTTGGCTTCATGGAGCCTATTAAATGAACTGTGGAAAAAGAAAAAAAAAAAAAAAAAAAAAAAACGCCGACCATATTTCGAAAAAAAAAGTGGGAACCAAAAAAAAAAAAAATCCACAAGGGTTTTTGGAATTAACAAAGGGCCAACAAAAAAAAAAAAAATTTCCACAACCCGGACCAAGAAAAAGGTCCCCCAAAGTCCCCGAAAAAGGGTCCAGATCGTCAACCCCGGGCCCAAAGGGAATTTTGAAAGTTTTGAAAACCCCAAAAATCCACGGGGAACCATAAAAACC]
[+] EMBL FR0060500 [GAATGGGGCATTGTATTCCTGAAACTAAAGCCACGATCCGGTTCTTAGCCCCTTTCTTATATAGGGATCAAACATTGGCTCCTTGCGGCTTTTCATTCAAAGGCTATC ACCATTGAAG ACTTGCCCAGCACGTTACATGTTTCTTGTTTTTGATCCCTTATTTCTTTTTTCTATGGGAAATATCAGATGGGGCTTTATTTTCCCAGTTGGTCTCTGACAGAACCAGGTCTTGCCAGGTTTTAAACTGAGGAAAGAATTGCCGTGCTGAATTCCATTTTTACTACAGCCGTTAGTTTAGCCGAGGCTCCTAT ]
[+] EMBL FR0056765 [ CAATCAAAGGGTAACAACAATTGTAGAACTTGTCAAGCAGGTTACATGTTTCTTGTTTTTGATTCCTTATTTCTTTTTTCTATGTGAAATATCAGATGGGGCTTTATTTTCCCAGTTGGGCTCTGACAGAACCAGGTCTTGCCAGGTTTTAAACTGAGGAAAGAATTGCCGTGCTGAATTCCATTTTTACTACAGCCGTTAGTTTAGCCGAGGCTCCTATATGTTCAATTTCCCAAAAGAGTGAATTCCTTTCAGACTGGTGAACTGCGCCTCCGGAGTGGCCGGCTGTTCATGACGTCTGCCTAAGGTATCTTCTGCTCAACACCTGCATTTTAAGTGTGCTGTAACATGGACTAATCTTGTTTAATGATCGGTAAATGTAACTTGGGTTCCCCAGAGTAAAATTTCAGCCGGGAACGATTTTGTACTTTATGTTCTTTGTATGATCAAT ]
[+] EMBL CA846768 [ CTCTGACAGAACCAGGTCTTGCCAGGTTTTAAACTGAGGAAAGAATTGCCGTGCTGAATTCCATTTTTACTACAGCCGTTAGTTTAGCCGAGGCTCCTATATGTTCAATTTCCCAAAAGAGTGAATTCCTTTCAGACTGGTGAACTGCGCCTCCGGAGTGGCCGGCTGTTCATGAAGTCTGCCTAAGGTATCTTCTGCTCAACACCTGCATTTTAAGTGTGCTGTAACATGGACTAATCTTGTTTAATGATCGGAAAATGTAACTTGGTTTCCCCAGAGTAAAATTTCAGCCGGGAACGATTTTGTACTTTATGTTCTTTGTATGATCAATATTTTTTCTCTGTCAGTTTGGCTTCATGGAGCCTATTAAATGAACTGTGGAAAAAGA ]
[+] EMBL CA846615 [ ACAGAACCAGGTCTTGCCAGGTTTTAAACTGAGGAAAGAATTGCCGTGCTGAATTCCATTTTTACTACAGCCGTTAGTTTAGCCGAGGCTCCTATATGTTCAATTTCCCAAAAGAGTGAATTCCTTTCAGACTGGTGAACTGCGCCTCCGGAGTGGCCGGCTGTTCATGAAGTCTGCCTAAGGTATCTTCTGCTCAACACCTGCATTTTAAGTGTGCTGTAACATGGACTAATCTTGTTTAATGATCGGAAAATGTAACTTGGTTTCCCCAGAGTAAAATTTCAGCCGGGAACGATTTTGTACTTTATGTTCTTTGTATGATCAATATTTTTTCTCTGTCAGTTTGGCTTCATGGAGCCTATTAAATGAACTGTGGAAAAAGA ]
[+] EMBL CA846663 [ ACAGAACCAGGTCTTGCCAGGTTTTAAACTGAGGAAAGAATTGCCGTGCTGAATTCCATTTTTACTACAGCCGTTAGTTTAGCCGAGGCTCCTATATGTTCAATTTCCCAAAAGAGTGAATTCCTTTCAGACTGGTGAACTGCGCCTCCGGAGTGGCCGGCTGTTCATGAAGTCTGCCTAAGGTATCTTCTGCTCAACACCTGCATTTTAAGTGTGCTGTAACATGGACTAATCTTGTTTAATGATCGGAAAATGTAACTTGGTTTCCCCAGAGTAAAATTTCAGCCGGGAACGATTTTGTACTTTATGTTCTTTGTATGATCAATATTTTTTCTCTGTCAGTTTGGCTTCATGGAGCCTATTAAATGAACTGTGGAAAAAGA ]
[+] EMBL CA846722 [ TCCTTTCAGACTGGTGAACTGCGCCTCCGGAGTGGCCGGCTGTTCATGAAGTCTGCCTAAGGTATCTTCTGCTCAACACCTGCATTTTAAGTGTGCTGTAACATGGACTAATCTTGTTTAATGATCGGAAAATGTAACTTGGTTTCCCCAGAGTAAAATTTCAGCCGGGAACGATTTTGTACTTTATGTTCTTTGTATGATCAATATTTTTTCTCTGTCAGTTTGGCTTCATGGAGCCTATTAAATGAACTG ]
[+] EMBL CA844949 [ GACTAATCTTGTTTAATGATCGGAAAATGTAACTTGGTTTCCCCAGAGTAAAATTTCAGCCGGGAACGATTTTGTACTTTATGTTCTTTGTATGATCAATATTTTTTCTCTGTCAGTTTGGCTTCATGGAGCCTATTAAATGAACTGTGGA ]
[+] EMBL FR0055830 [ CAGAGTAATATTCAAGCCGGGAACGATTTTGTACTTAATGTTCTTTGTATGATCAATATTTTTTCTCTGTCAGTTTGGCTTCATGGAGCCTATTAAATGAACTGTGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACGCCGACCATATTTCGAAAAAAAAAGTGGGAACCAAAAAAAAAAAAAATCCACAAGGGTTTTTGGAATTAACAAAGGGCCAACAAAAAAAAAAAAAATTTCCACAACCCGGACCAAGAAAAAGGTCCCCCAAAGTCCCCGAAAAAGGGTCCAGATCGTCAACCCCGGGCCCAAAGGGAATTTTGAAAGTTTTGAAAACCCCAAAAATCCACGGGGAACCATAAAAACC]
consensusID : consensus_2836#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 845 fasta sequence
[CCGCGTCGTCGCCTCAGTACTCTATCACTA-AAAGGAAAAGCGAGGATGTCGGACGAGGGGGGATTGTTCATTGGAGGTCTGAGCTTCGAGACCAACGAGGAGTCTCTGGCTGAGGCCTTCGGCAAGTACGGAACCATCGAAAAGGTGGACGTGATCCGAGACAAAGAGACCGGGAGATCTCGCGGGTTTGGCTTTGTGAAATATGAAAGTGTCGAAGACGCGAAGGACGCCATGACGGCGATGAACGGAAAGTCTTTGGACGGCCGGGCGATTCGTGTGGATGAAGCTGGCAAGGGTCTTCGGCCCAGGGGAGGCTTCCAGTCAAGCAGCAGATCCCGGGGGAGATCTGGAAGAGGCAGCTATGGTGGAGACAGAAGCTATGG-CGACGGGAGTTATGGTGAAAGAAGCTATGGCAACAATGACCGGGGCTTTGGAGGCAGCGGTGGCTACAGAAGTGGGGGCTACTCTGGTGGCTACAGAGACAACAGGATGCAGGGTGGATACGAACGCTCCGGGTCCTACCGTGATGGATATGATGGCTATGGTAAGCATCAATGATACGCATTTGTGACGTGAATAAACCTATGTTGGGGCTGTTATGTCTTCAAATGGCATCAAACTAGCCATGTGTGGACGCTGCGGTCCCCAACCCGAAACATTCTCCTCAAAGGATCCAGTTCAGTTCCTTAAAACCTTCTTCCAGCCCCAACATATAAAGCCATGTTTGAAGTCAGCCCCTCAGTTTTGTACCTGAGCCTAAGTTGGTACCTCTAAGCGGGTGCCAGATTTAGGTAGCCCTCCAGCCTTGCTCTGACCAGAGCTTAGCCACACCGACGGGCGAAGGT]
[+] EMBL CA591170 [CCGCGTCGTCGCCTCAGTACTCTATCACTA AAAGGAAAAGCGAGGATGTCGGACGAGGGTAAATTGTTCATTGGAGGTCTGAGCTTCGAGACCAACGAGGAGTCTCTGGCTGAGGCCTTCGGCAAGTACGGAACCATCGAAAAGGTGGACGTGATCCGAGACAAAGAGACCGGGAGATCTCGCGGGTTTGGCTTTGTGAAATATGAAAGTGTCGAAGACGCGAAGGACGCCATGACGGCGATGAACGGAAAGTCTTTGGACGGCCGGGCGATTCGTGTGGATGAAGCTGGCAAGGGTCTTCGTCCCAGGGGAGGCTTCCAGTCAAGCAGCAGATCCCGGGGGAGATCTGGAAGAGGCAGCTATGGTGGAGACAGAAGCTATGG CGACAGGAGTTATGGTGAAAGAAGCTATGGCAACAATGACCGGGGCTTTGGAGGCAGCGGTGGCTACAGAAGTGGAGGCTACTCTGGTGGCTACAGAGACAACAGGATGCAGGGTGGATACGAACGCTCCGGGTCCTACCGTGATGGATATGATGGCTATGGTAAGCATCAATGATACGCATTTGTGACGTGAATAAAC ]
[+] EMBL FR0059147 [ GTCGCCTCAGTACTCTATCACTATTAAGGAAAAGCGAGGATGTCGGACGAGGGGGGATTGTTCATTGGAGGTCTGAGCTTCGAGACCAACGAGGAGTCTCTGGCTGAGGCCTTCGGCAAGTACGGAACCATCGAAAAGGTGGACGTGATCCGAGACAAAGAGACCGGGAGATCTCGCGGGTTTGGCTTTGTGAAATATGAAAGTGT ]
[+] EMBL FR0059445 [ catggGGAGGTCTGAGCTTCGAGACCAACGAGGAGTCTCTGGCTGAGGCCTTCGGCAAGTACGGAACCATCGAAAAGGTGGACGTGATCCGAGACAAAGAGACCGGGAGATCTCGCGGGTTTGGCTTTGTGAAATATGAAAGTGTCGAAGACGCGAAGGACGCCATGACGGCGATGAACGGAAAGTCTTTGGACGGCCGGGCGATTCGTGTGGATGAAGCTGGCAAGGGTCTTCGGCCCAGGGGAGGCTTCCAGTCAAGCAGCAGATCCCGGGGGAGATCTGGAAGAGGCAGCTATGGTGGAGACAGAAGCTATGGCCGACGGGAGTT ]
[+] EMBL FR0062490 [ AGCTATGGCAACAATGACCGGGGCTTTGGAGGCAGCGGTGGCTACAGAAGTGGGGGCTACTCTGGTGGCTACAGAGACAACAGCATGCAGGGTGGATACGAACGCTCCGGGTCCTACCGTGATGGATATGATGGCTATGGTAAGCATCAATGATACGCATTTGTGACGTGAATAAACCTATGTTGGGGCTGTTATGTCTTCAAATGGCATCAAACTAGCCATGTGTGGACGCTGCGGTCCCCAACCCGAAACATTCTCCTCAAAGGATCCAGTTCAGTTCCTTAAAACCTTCTTCCAGCCCCAACATATAAAGCCATGTTTGAAGTCAGCCCCTCAGTTTTGTACCTGAGCCTAAGTTGGTACCTCTAAGCGGGTGCCAGATTTAGGTAGCCCTCCAGCCTTGCTCTGACCAGAGCTTAGCCACACCGACGGGCGAAGGT]
consensusID : consensus_2836#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 12 consensus length = 820 fasta sequence
[AGGAGCCAATGTTTGATCCCTATATAAGAAAGGGACTAAGAACCGGATCGTGGCTTTAGTTTCAGGAATACAATGCCCAATTCCAGGGAGTCATTCTCGAATAACAATTTGAAACATTAGGAATGGCTACAA-TTTTTTTTTTTTTAAGATGCCTACAACAAAACTACAAAACTAAGGTCAGCAATAACACGTGGACTTTTCTTGAGGAGCAAATCTTTGAAATACCGCCAGCCAAGTGATGATCTTGATTCAGGGAGATGCTTACTCGTGTGTAGCATAGCCATCATATCCATCACGGTAGGACCCGGAGCGTTCGTATCCACCCTGCATCCTGTTGTCTCTGTAGCCACCAGAGTAGCCTCCACTTCTGTAGCCACCGCTGCCTCCAAAGCCCCGGTCATTGTTGCCATAGCTTCTTTCACCATAACTCCTGTCGCCATAGCTTCTGTCTCCACCATAGCTGCCTCTTCCAGATCTCCCCCGGGATCTGCTGCTTGACTGGAAGCCTCCCCTGGGACGAAGACCCTTGCCAGCTTCATCCACACGAATCGCCCGGC-CGTCCAAAGACTTTCCGTTCATCGCCGTCATGGCGTCCTTCGCGTCTTCGACACTTTCATATTTCACAAAGCCAAACCCGCGAGATCTCCCGGTCTCTTTGTCTCGGATCACGTCCACCTTTTCGATGGTTCCGTACTTGCCGAAGGCCTCAGCCAGAGACTCCTCGTTGGTCTCGAAGCTCAGACCTCCAATGAACAATTTACCCTCGTCCGACATCCTCGCTTTTCCTTTTAGTGATAGAGTACTGAGGCGACGACGAGGG]
[-] EMBL CA341151 [AGGAGCCAATGTTTGATCCCTATATAAGAAAGGGACTAAGAACCGGATCGTGGCTTTAGTTTCAGGAATACAATGCCCAATTCCAGGGAGTCATTCTCGAATAACAATTTGAAACATTAGGAATGGCTACAATTTTTTTTTTTTTTAAGATGCCTACAACAAAACTACAAAACTAAGGTCAGCAATAACACGTGGACTTTTCTTGAGGAGCAAATCTTTGAAATACCGCCAGCCAAGTGATGATCTTGATTCAGGGAGATGCTTACTCGTGTGTAGCATAGCCATCATATCCATCACGGTAGGACCCGGAGCGTTCGTATCCACCCTGCATCCTGTTGTCTCTGTAGCCACCAGAGTAGCCTCCACTTCTGTAGCCACCGCTGCCTCCAAAGCCCCGGTCATTGTTGCCATAGCTTCTTTCACCATAACTCCTGTCGCCATAGCTTCTGTCTCCACCATAGCTGCCTCTTCCAGATCTCCCCCGGGATCTGCTGCTTGACTGGAAGCCTCCCCTGGGACGAAGACCCTTGCCAGCTT ]
[-] EMBL CA847240 [ AGCCAATGTTTGATCCCTATATAAGAAAGGGACTAAGAACCGGATCGTGGCTTTAGTTTCAGGAATACAATGCCCAATTCCAGGGAGTCATTCTCGAATAACAATTTGAAACATTAGGAATGGCTACAA TTTTTTTTTTTTTAAGATGCCTACAACAAAACTACAAAACTAAGGTCAGCAATAACACGTGGACTTTTCTTGAGGAGCAAATCTTTGAAATACCGCCAGCCAAGTGATGATCTTGATTCAGGGAGATGCTTACTCGTGTGTAGCATAGCCATCATATCCATCACGGTAGGACCCGGAGCGTTCGTATCCACCCTGCATCCTGTTGTCTCTGTAGCCACCAGAGTAGCCTCCACTTCTGTAGCCACCGCTGCCTCCAAAGCCCCGGTCATTGTTGCCATAGCTTCTTTCACCATAACTCCTGTCGCCATAGCTTCTGTCTCCACCATAGCTGCCTCTTCCAGATCTCCCCCGGGATCTGCTGCTTGACTGGAAGCCTCCCCTGGGACGAAGACCCTTGCCAGCTTCATCCACACGAATCGCCCGGC CGTCCAAAGACTTTCCGTTCATCGCCGTCATGGCGTCCTTCGCGTCTTCGACACTTTCATATTTCACAAAGCCAAACCCGCGAGATCTCCCGGTCTCTTTGTCTCGGATCACGTCCACCTTTTCGATGGTTCCGTACTTGCCGAAGGCCTCAGCCAGAGACTCCTCGTTGGTCTCGAAGCTCAGACCTCCAATGAACAATTTACCCTCGTCCGACATCCTCGCTTTTCCTTTTAGTGATAGAG ]
[-] EMBL CA844594 [ AGGAATGGCTACAA TTTTTTTTTTTTTAAGATGCCTACAACAAACCTACAAAACTAAGGTCAGCAATAACACGTGGACTTTTCTTGAGGAGCAAATCTTTGAAATACCGCCAGCCAAGTGATGATCTTGATTCAGGGAGATGCTTACTCGTGTGTAGCATAGCCATCATATCCATCACGGTAGGACCCGGAGCGTTCGTATCCACCCTGCATCCTGTTGTCTCTGTAGCCACCAGAGTAGCCTCCACTTCTGTAGCCACCGCTGCCTCCAAAGCCCCGGTCATTGTTGCCATAGCTTCTTTCACCATAACTCCTGTCGCCATAGCTTCTGTCTCCACCATAGCTGCCTCTTCCAGATCTCCCCCGGGATCTGCTGCTTGACTGGAAGCCTCCCCTGGGACGAAGACCCTTGCCAGCTTCATCCACACGAATCGCCCGGC CGTCCAAAGACTTTCCGTTCATCGCCGTCATGGCGTCCTTCGCGTCTTCGACACTTTCATATTTCACAAAGCCAAACCCGCGAGATCTCCCGGTCTCTTTGTCTCGGATCACGTCCACCTTTTCGATGGTTCCGTACTTGCCGAAGGCCTCAGCCAGAGACTCCTCGTTGGTCTCGAAGCTC ]
[+] EMBL CA332225 [ TTTTTAAGATGCCTACAACAAAACCACAAAACTAAGGTCAGCAATAACACGTGGACTTTTCTTGAGGAGCAAATCTTTGAAATACCGCCAGCCAAGTGATGATCTTGATTCAGGGAGATGCTTACTCGTGTGTAGCATAGCCATCATATCCATCACGGTAGGACCCGGAGCGTTCGTATCCACCCTGCATCCTGTTGTCTCTGTAGCCACCAGAGTAGCCTCCACTTCTGTAGCCACCGCTGCCTCCAAAGCCCCGGTCATTGTTGCCATAGCTTCTTTCACCATAACTCCTGTCGCCATAGCTTCTGTCTCCACCATAGCTGCCTCTTCCATATCTCCCCCGGGATCTGCTGCTTGACTGGAAGCCTCCCCTGGGACGAAGACCCTTGCCAGCTTCATCCACACGAATCGCCCGGC CGTCCAAAGACTTTCCGTTCATCGCCGTCATGGCGTCCTTCGCGTCTTCGACACTTTCATATTTCACAAAGCCAAACCCGCGAGATCTCCCGGTCTCTTTGTCTCGGATCACGTCCACCTTTTCGATGGTTCCGTACTTGCCGAAAGCCTCAGCCAGAGACTTCTCGTTGGTCTCGAAGCTCAGACCTCC ]
[-] EMBL CA588513 [ AAGGTCAGCAATAACACGTGGACTTTTCTTGAGGAGCAAATCTTTGAAATACCGCCAGCCAAGTGATGATCTTGATTCAGGGAGATGCTTACTCGTGTGTAGCATAGCCATCATATCCATCACGGTAGGACCCGGAGCGTTCGTATCCACCCTGCATCCTGTTGTCTCTGTAGCCACCAGAGTAGCCTCCACTTCTGTAGCCACCGCTGCCTCCAAAGCCCCGGTCATTGTTGCCATAGCTTCTTTCACCATAACTCCTGTCGCCATAGCTTCTGTCTCCACCATAGCTGCCTCTTCCAGATCTCCCCCGGGATCTGCTGCTTGACTGGAAGCCTCCCCTGGGACGAAGACCCTTGCCAGCTTCATCCACACGAATCGCCCGGC CGTCCAAAGACTTTCCGTTCATCGCCGTCATGGCGTCCTTCGCGTCTTCGACACTTTCATATTTCACAAAGCCAAACCCGCGAGATCTCCCGGTCTCTTTGTCTCGGATCACGTCCACCTTTTCGATGGTTCCGTACTTGCCGAAGGCCTCAGCCAGAGACTCCTCGTTGGTCTCGAAGCTCAGACCTCCAATGAACAATTTACCCTCGTCCGACATACGCGCTTTTCCTTTTAGTGATAGAGTACTGAGGCGACtttcaccg]
[-] EMBL CA844595 [ AAATCTTTGAAATACCGCCACCCAAGTGATGATCTTGATTCAGGGAGATGCTTACTCGTGTGTAGCATAGCCATCATATCCATCACGGTAGGACCCGGAGCGTTCGTATCCACCCTGCATCCTGTTGTCTCTGTAGCCACCAGAGTAGCCTCCACTTCTGTAGCCACCGCTGCCTCCAAAGCCCCGGTCATTGTTGCCATAGCTTCTTTCACCATAACTCCTGTCGCCATAGCTTCTGTCTCCACCATAGCTGCCTCTTCCAGATCTCCCCCGGGATCTGCTGCTTGACTGGAAGCCTCCCCTGGGACGAAGACCCTTGCCAGCTTCATCCACACGAATCGCCCGGC CGTCCAAAGACTTTCCGTTCATCGCCGTCATGGCGTCCTTCGCGTCTTCGACACTTTCATATTTCACAAAGCCAAACCCGCGAGATCTCCCGGTCTCTTTGTCTCGGATCACGTCCACCTTTTCGATGGTTCCGTACTTGCAGAGGGC ]
[-] EMBL CA330425 [ TTTGAAATACCGCCAGCCAAGTGATGATCTTGATTCAGGGAGATGCTTACTCGTGTGTAGCATAGCCATCATATCCATCACGGTAGGACCCGGAGCGTTCGTATCCACCCTGCATCCTGTTGTCTCTGTAGCCACCAGAGTAGCCTCCACTTCTGTAGCCACCGCTGCCTCCAAAGCCCCGGTCATTGTTGCCATAGCTTCTTTCACCATAACTCCTGTCGCCATAGCTTCTGTCTCCACCATAGCTGCCTCTTCCAGATCTCCCCCGGGATCTGCTGCTTGACTGGAAGCCTCCCCTGGGACGAAGACCCTTGCCAGCTTCATCCACACGAATCGCCCGGCAAGTCCAAAGACTTTCCGTTCATCGCCGTCATGGCGTCCTTCGCGTCTTCGACACTTTCATATTTCACAAAGCCAAACCCGCGAGATCTCCCGGTCTCTTTGTCTCGGATCACGTCCACCTTTTCGATGGTTCCGTACTTGCCGAAGGCCTCAGCCAGAGACTCCTCGTTGGTCTCGAAGCTCAGACCTCC ]
[-] EMBL CA846604 [ TGAAATACCGCCAGCCAAGTGATGATCTTGATTCAGGGAGATGCTTACTCGTGTGTAGCATAGCCATCATATCCATCACGGTAGGACCCGGAGCGTTCGTATCCACCCTGCATCCTGTTGTCTCTGTAGCCACCAGAGTAGCCTCCACTTCTGTAGCCACCGCTGCCTCCAAAGCCCCGGTCATTGTTGCCATAGCTTCTTTCACCATAACTCCTGTCGCCATAGCTTCTGTCTCCACCATAGCTGCCTCTTCCAGATCTCCCCCGGGATCTGCTGCTTGACTGGAAGCCTCCCCTGGGACGAAGACCCTTGACAACTTCATCCACACGAATCGCCCGGC CGTCCAAAGACTTTCCGTTCATCGCCGTCATGGCGTCCTTCGCGTCTTCGACACTTTCATATTTCACAAAGCCAAACCCGCGAGATCTCCCGGTCTCTTTGTCTCGGATCACGTCCACCTTTTCGATGGTTCCGTACTTGCCGAAGGC ]
[-] EMBL CA846751 [ GATCTTGATTCAGGGAGATGCTTACTCGTGTGTAGCATAGCCATCATATCCATCACGGTAGGACCCGGAGCGTTCGTATCCACCCTGCATCCTGTTGTCTCTGTAGCCACCAGAGTAGCCTCCACTTCTGTAGCCACCGCTGCCTCCAAAGCCCCGGTCATTGTTGCCATAGCTTCTTTCACCATAACTCCTGTCGCCATAGCTTCTGTCTCCACCATAGCTGCCTCTTCCAGATCTCCCCCGGGATCTGCTGCTTGACTGGAAGCCTCCCCTGGGACGAAGACCCTTGCCAGCTTCATCCACACGAATCGCCCGGC CGTCCAAAGACTTTCCGTTCATCGCCGTCATGGCGTCCTTCGCGTCTTCGACACTTTCATATTTCACAAAGCCAAACCCGCGAGATCTCCCGGTCTCTTTGTCTCGGATCACGTCCACCTTTTCGATGGTTCCGTACTTGCCGAAGGCCTCAGCCAGAGACTCCTCGTTGGTCTCGAAGCTCAGACCTCCAATGAACAATTTACCCTCGTCCGA ]
[-] EMBL CA588967 [ TCTTGATTCAGGGAGATGCTTACTCGTGTGTAGCATAGCCATCATATCCATCACGGTAGGACCCGGAGCGTTCGTATCCACCCTGCATCCTGTTGTCTCTGTAGCCACCAGAGTAGCCTCCACTTCTGTAGCCACCGCTGCCTCCAAAGCCCCGGTCATTGTTGCCATAGCTTCTTTCACCATAACTCCTGTCGCCATAGCTTCTGTCTCCACCATAGCTGCCTCTTCCATATCTCCCCCGGGATCTGCTGCTTGACTGGAAGCCTCCCCTGGGACGAAGACCCTTGCCAGCTTCATCCACACGAATCGCCCGGC CGTCCAAAGACTTTCCGTTCATCGCCGTCATGGCGTCCTTCGCGTCTTCGACACTTTCATATTTCACAAAGCCAAACCCGCGAGATCTCCCGGTCTCTTTGTCTCGGATCACGTCCACCTTTTCGATGGTTCCGTACTTGCCGAAGGCCTCAGCCAGAGACTTCTCGTTGGTCTCGAAGCTCAGACCTCCAATGAACAATTTACCCTCGTCCGACATCCTCGCTTTTCCTTTTAGTGATAGAGTACTGAGGCGACGACGCGG ]
[-] EMBL BU805860 [ AGGGAGATGCTTACTCGTGTGTAGCATAGCCATCATATCCATCACGGTAGGACCCGGAGCGTTCGTATCCACCCTGCATCCTGTTGTCTCTGTAGCCACCAGAGTAGCCTCCACTTCTGTAGCCACCGCTGCCTCCAAAGCCCCGGTCATTGTTGCCATAGCTTCTTTCACCATAACTCCTGTCGCCATAGCTTCTGTCTCCACCATAGCTGCCTCTTCCAGATCTCCCCCGGGATCTGCTGCTTGACTGGAAGCCTCCCCTGGGACGAAGACCCTTGCCAGCTTCATCCACACGAATCGCCCGGC CGTCCAAAGACTTTCCGTTCATCGCCGTCATGGCGTCCTTCGCGTCTTCGACACTTTCATATTTCACAAAGCCAAACCCGCGAGATCTCCCGGTCTCTTTGTCTCGGATCACGTCCACCTTTTCGATGGTTCCGTACTTGCCGAAGGCCTCAGCCAGAGACTCCTCGTTGGTCTCGAAGCTCAGACCTCCAATGAACAATTTACCCTCGTCCGACATCCTCGCTTTTCCTTTTAGTGATAGAGTACTGAGGCGACGA ]
[-] EMBL CA330861 [ CTGTAGCCACCAGAGTAGCCTCCACTTCTGTAGCCACCGCTGCCTCCAAAGCCCCGGTCATTGTTGCCATAGCTTCTTTCACCATAACTCCTGTCGCCATAGCTTCTGTCTCCACCATAGCTGCCTCTTCCAGATCTCCCCCGGGATCTGCTGCTTGACTGGAAGCCTCCCCTGGGACGAAGACCCTTGCCAGCTTCATCCACACGAATCGCCCGGC CGTCCAAAGACTTTCCGTTCATCGCCGTCATGGCGTCCTTCGCGTCTTCGACACTTTCATATTTCACAAAGCCAAACCCGCGAGATCTCCCGGTCTCTTTGTCTCGGATCACGTCCACCTTTTCGATGGTTCCGTACTTGCCGAAGGCCTCAGCCAGAGACTCCTCGTTGGTCTCGAAGCTCAGACCTCC ]
consensusID : consensus_2836#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 383 fasta sequence
[ATATATTTTACGTGCTAAAGCCTATAATTACCTGCGGATACTGCACCAGTGACCTACTTTGAACTGCATGCGCAGATTGAATAACGCACGAGGGCCCGGGGGCTAATTTAGCAAGCGCTACAACTTCTCTCCAAAAATACACAACACACAACACAAATATATAATATTCGCTTTTCTCTCGGTTTGTAGGAAAAGCGAGGATGTCGGACGAGGGTAAATTGTTCATTGGAGGTCTGAGCTTCGAGACCAACGAGGAGTCTCTGGCTGAGGCCTTCGGCAAGTACGGAACCATCGAAAAGGGTAGGTTCAAAACATTTTACCATCGCAGGCGCGCTACCCCGTTAACATTCCCGATAAATAGCAGCTCCGTTTGGGGGTAAAAT]
[+] EMBL BU808448 [ATATATTTTACGTGCTAAAGCCTATAATTACCTGCGGATACTGCACCAGTGACCTACTTTGAACTGCATGCGCAGATTGAATAACGCACGAGGGCCCGGGGGCTAATTTAGCAAGCGCTACAACTTCTCTCCAAAAATACACAACACACAACACAAATATATAATATTCGCTTTTCTCTCGGTTTGTAGGAAAAGCGAGGATGTCGGACGAGGGTAAATTGTTCATTGGAGGTCTGAGCTTCGAGACCAACGAGGAGTCTCTGGCTGAGGCCTTCGGCAAGTACGGAACCATCGAAAAGGGTAGGTTCAAAACATTTTACCATCGCAGGCGCGCTACCCCGTTAACATTCCCGATAAATAGCAGCTCCGTTTGGGGGTAAAAT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_2836#1 ------------------------CCGCGTCGTCGCCTCAGTACTCTATCACTAAAAGGA 36
consensus_2836#3 ------------------------------------------------------------
consensus_2836#2 --------------------------------AGGAGCCAATGTTTGATCCCTATATAAG 28
consensus_2836#0 GAATGGGGCATTGTATTCCTGAAACTAAAGCCACGATCCGGTTCTTAGCCCCTTTCTTAT 60
consensus_2836#1 AAAGCGAGGATGTCGGACGAGGGGGGATTGTTCATTGGAGGTCTGAGCTTCGAGACCAAC 96
consensus_2836#3 ------------------------------------------------------------
consensus_2836#2 AAAGGGACTAAG--AACCGGATCGTGGCTTTAGTTTCAGGAATACAATGCCCAATTCCAG 86
consensus_2836#0 ATAGGGATCAAA--CATTGGCTCCTTGCGGCTTTTCAATCAAAGGGTAACAACAATTGAA 118
consensus_2836#1 GAGGAGTCTCTGGCTGAGGCCTTCGGCAAGTACGGAACCATCGAAAAGGTGGACGTGATC 156
consensus_2836#3 ------------------------------------------------------------
consensus_2836#2 GGAGTCATTCTCGAATAACAATTTGAAACATTAGGAATGGCTACAATTTTTTTTTTTTTA 146
consensus_2836#0 GAACTTGCCAAGCAGGTTACATGTTTCTTGTTTTTGATCCCTTATTTCTTTTTTCTATGG 178
consensus_2836#1 CGAGACAAAGAGACCGGGAGATCTCGCGGGTTTGGCTTTGTGAA-ATATGAAAGTGTCGA 215
consensus_2836#3 ----------------ATATATTTTACGTGCTAAAGCCTATAATTACCTGCGGATACTGC 44
consensus_2836#2 AGATGCCTA-----CAACAAAACTACAAAACTAAGGTCAGCAATAACACGTGGACTTTTC 201
consensus_2836#0 GAAATATCAGATGGGGCTTTATTTTCCCAGTTGGGCTCTGACAGAACCAGGTCTTGCCAG 238
* * * * * *
consensus_2836#1 AGACGCGAAGGACGCCATGACGGCGATGAACGGAAAGTCTTTGGACGGCCGGGCGATTCG 275
consensus_2836#3 ACCAGTGACCTACTTTG-AACTGC-ATGCGCAGA------TTGAATAACGCACGAGGGCC 96
consensus_2836#2 TTGAGGAGCAAATCTTTGAAATACCGCCAGCCAAGTGATGATCT-TGATTCAGGGAGATG 260
consensus_2836#0 GTTTTAAACTGAGGAAAGAATTGC--CGTGCTGAATTCCATTTT-TACTACAGCCGTTAG 295
* * * * * *
consensus_2836#1 TGTGGATGAAGCTGGCAAGGGTCTTCGGCCCAGGGGAGGCTTCCAGTCAAGCAGCAGATC 335
consensus_2836#3 CGGGGGCTAATTTAGCAAGCG-CTACAACTTC-------TCTCCAAAAATACA-CAACAC 147
consensus_2836#2 CTTACTCGTGTGTAGCATA-GCCATCATATCCATCACGGTAGGACCCGGAGCGTTCGTAT 319
consensus_2836#0 TTTAGCCGAGGCTCCTATATG-TTCAATTTCCCAAAAGAGTGAATTCCTTTCAGACTGGT 354
* * * *
consensus_2836#1 CCGGGGGAGATCTGGAAGAGGCAGCTATGGTGGAGACAGAAGCTATGGCGACGGGAGTTA 395
consensus_2836#3 ACAACACAAATATATAATATTCGCTTTTCTCTCGGTTTGTAGGAAAAGCGA--GGATGTC 205
consensus_2836#2 CCACCCTGCATCCTGTTGTCTCTGTAGCCACCAGAGTAGCCTCCACTTCTGTAGCCACCG 379
consensus_2836#0 GAACTGCGCCTCCGGAGTGGCCGGCTGTTCATGAAGT--CTGCCTAAGGTATCTTCTGCT 412
* *
consensus_2836#1 TGGTGAAAGAAGCTATGGCA-ACAATGACCGGGGCTTTGGAGGCAGCGGTGGCTACAGAA 454
consensus_2836#3 GGACGAGGGTAAATTGTTCA-TTGGAGGTCTGAGCTTCGAGACCAACGAGGAGTCTCTGG 264
consensus_2836#2 CTGCCTCCAAAGCCCCGGTC-ATTGTTGCCATAGCTTCTTTCACCATAACTCCTGTCGCC 438
consensus_2836#0 CAACACCTGCATTTTAAGTGTGCTGTAACATGGACTAATCTTGTTTAATGATCGGAAAAT 472
* **
consensus_2836#1 GTGGGGGCTACTCTGGTGGCTACAGAGACAACAGGATGCAGGGTGGATACGAACGCTCCG 514
consensus_2836#3 CTGAGGC---CTTCGGCAAGTACGGAACCATCGAAA---AGGGTAGGTTCAAA------A 312
consensus_2836#2 ATAGCTTCTGTCTCCACCATAGCTGCCTCTTCCAGATCTCCCCCGGGATCTGCTGCTTGA 498
consensus_2836#0 GTAACTTGGTTTCCCCAGAGTAAAATTTCAGCCGGGAACGATTTTGTACTTTATGTTCTT 532
* * * *
consensus_2836#1 GGTCCTACCGTGATGGATATGATGGCTATGGTAAGCATCAATGATACGCATTTGTGACGT 574
consensus_2836#3 CATTTTACCATCGCAGGCGCGCTACCC--CGTTAACATTCCCGATAAATAGCAGCTCCGT 370
consensus_2836#2 CTGGAAGCCTCCCCTGGGACGAAGACCCTTGCCAGCTTCATCCACACGAATCGCCCGGCC 558
consensus_2836#0 TGTATGATCAATATTTTTTCTCTGTCA--GTTTGGCTTCATGGAGCCTATTAAATGAACT 590
* * * * *
consensus_2836#1 GAATAAACCTATGTTGGGGCTGTTATGTCTTCAAATGGCATCAAACTAGCCATGTGTGGA 634
consensus_2836#3 --TTGGGGGTAAAAT--------------------------------------------- 383
consensus_2836#2 GTCCAAAGACTTTCCGTTCATCGCCGTCATGGCGTCCTTCGCGTCTTCGACACTTTCATA 618
consensus_2836#0 GTGGAAAAAGAAAAAAAAAAAAAAAAAAAAAAAACGCCGACCATATTTCGAA---AAAAA 647
consensus_2836#1 CGCTGCGGTCCCCAACCCGAAACATTCTCCTCAAAGGATCCAGTTCAGTTCCTTAAAACC 694
consensus_2836#3 ------------------------------------------------------------
consensus_2836#2 TTTCACAAAGCCAAACCCGCGAGATC--TCCCGGTCTCTTTGTCTCGGATCACGTCCACC 676
consensus_2836#0 AAGTGGGAACCAAAAAAAAAAAAAATCCACAAGGGTTTTTGGAATTAACAAAGGGCCAAC 707
consensus_2836#1 TTCTTCCAGCCCCAACATATAAAGCCATGTTTGAAGTCAGCCCCTCAGTTTTGTACCTGA 754
consensus_2836#3 ------------------------------------------------------------
consensus_2836#2 TTTTCGATGGTTC--CGTACTTGCCGAAGGCCTCAGCCAGAGACTCCTCGTTGGTCTCGA 734
consensus_2836#0 AAAAAAAAAAAAAATTTCCACAACCC--GGACCAAGAAAAAGGTCCCCCAAAGTCCCCGA 765
consensus_2836#1 GCCTAAGTTGGTACCTCTAAGCGGGTGCCAGATTTAGGTAGCCCTCCAGCCTTGCTCTGA 814
consensus_2836#3 ------------------------------------------------------------
consensus_2836#2 AGCTCAGACCTCCAATGAACAATTTACCCTCGTCCGACATCCTCGCTTTTCCTTTTAGTG 794
consensus_2836#0 AAA-AGGGTCCAGATCGTCAACCCCGGGCCCAAAGGGAATTTTGAAAGTTTTGAAAACCC 824
consensus_2836#1 CCAGAGCTTAGCCACACCGACGGGCGAAGGT 845
consensus_2836#3 -------------------------------
consensus_2836#2 ATAGAGTACTGAGGCGACGACGAGGG----- 820
consensus_2836#0 CAAAAATCCACGGGGAACCATAAAAACC--- 852
|
|||||||
| Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |