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These datas are free for academic use only, please contact me for any other use. Takifugu rubripes see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2879#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 32 consensus length = 600 fasta sequence
[AAGTACCAGGTTACATGAAGTGAAAGGTTCTGCCGGTTCTTTTGGTGTTGACGGTACCTCGACCCGGCTCCCGGTGATCCATGTCGTTCCTGGTGCGTCTCTGAGC-CTCCGCCCGAACTTTGACAGTTTTCAGGTCTGACCAGAGGAGGAGCCATGACGGAGTTCCAGGAG-AAGCTTCGGCA-GCAGCACGAGGA-GTCGCTGCACC--GTGAGCTAGAGGCACTGCTCAGTACCGCCGACCATGCTGACGCACAGAGCAGC--AG-AAAAGACTTCCAAGGCTTCCA--GAAGCTCTTTCACAGGTTCCTGCAGGTCAAAGGTCCTTCGGTGGAATGGTCCAAGATCAATCGGCCACCGGAGCAGTCGGTTCAACCTTATGAGAAGATCAAAGCC-AAAGGACTTCCTGCTGACATCAGCACCTGCCTCAGCAAGCTGGCGGTGGTCAAGCTCAACGGGGGAC-TGGGCACCAGCAT-GGGCTGCAAAGGCCCCAAGAGTCTGATCAGCGTTCGCAATGAGAACACCTTCCTGGACCTGACGGTGCAGCAGATCGAGCACTTAAACAAGACGTTCAACACAGACGTTCCGCTGGNGCTCATGAACTCCTTC]
[+] EMBL BU804897 [AAGTACCAGGTTACATGAAGTGAAAGGTTCTGCCGGTTCTTTTGGTGTTGACGGTACCTCGACCCGGCTCCCGGAGATCCATGTCGTTCCTGGTGCGTCTCTGAGC CTCCGCCCGAACTTTGACAGTTTTCAGGTCTGACCAGAGGAGGAGCCATGACGGAGTTCCAGGAG AAGCTTCGGCA GCAGCACGAGGA GTCGCTGCACC GTGAGCTAGAGGCACTGCTCAGTACCGCCGACCATGCTGACGCACAGAGCAGC AG AAAAGACTTCCAAGGCTTCCA GAAGCTCTTTCACAGGTTCCTGCAGGTCAAAGGTCCTTCGGTGGAATGGTCCAAGATCAATCGGCCACCGGAGCAGTCGGTTCAACCTTATGAGAAGATCAAAGCC AAAGGACTTCCTGCTGACATCAGCACCTGCCTCAGCAAGCTGGCGGTGGTCAAGCTCAACGGGGGAC TGGG ]
[+] EMBL BU805264 [ AGTACCAGGTTACATGAAGTGAAAGGTTCTGCCGGTTCTTTTGGTGTTGACGGTACCTCGACCCGGCTCCCGGTGATCCATGTCGTTCCTGGTGCGTCTCTGAGC CTCCGCCCGAACTTTGACAGTTTTCAGGTCTGACCAGAGGAGGAGCCATGACGGAGTTCCAGGAG AAGCTTCGGCA GCAGCACGAGGA GTCGCTGCACC GTGAGCTAGAGGCACTGCTCAGTACCGCCGACCATGCTGACGCACAGAGCAGC AG AAAAGACTTCCAAGGCTTCCA GAAGCTCTTTCACAGGTTCCTGCAGGTCAAAGGTCCTTCGGTGGAATGGTCCAAGATCAATCGGCCACCGGAGCAGTCGGTTCAACCTTATGAGAAGATCAAAGCC AAAGGACTTCCTGCTGACATCAGCACCTGCCTCAGCAAGCTGGCGGTGGTCAAGCTCAACGGGGGAC TGGGC ]
[+] EMBL BU807342 [ GTACCAGGTTACATGAAGTGAAAGGTTCTGCCGGTTCTTTTGGTGTTGACGGTACCTCGACCCGGCTCCCGGTGATCCATGTCGTTCCTGGTGCGTCTCTGAGC CTCCGCCCGAACTTTGACAGTTTTCAGGTCTGACCAGAGGAGGAGCCATGACGGAGTTCCAGGAG AAGCTTCGGCA GCAGCACGAGGA GTCGCTGCACC GTGAGCTAGAGGCACTGCTCATTACCGCCGACCATGCTGACGCACAGAGCAGC AG AAAAGACTTCCAAGGCTTCCA GAAGCTCTTTCACAGGTTCCTGCAGGTCAAAGGTCCTTCGGTGGAATGGTCCAAGATCAATCGGCCACCGGAGCAGTCGGTTCAACCTTATGAGAAGATCAAAGCC AAAGGACTTCCTGCTGACATCAGCACCTGCCTCAGCAAGCTGGCGGTGGTCAAGCTCAACGGGGGAC TGGGCACCAGCAT GGGCTGCAAAGGCCCCAAGAGTCTGATCAGCGTTCGCAATGAGAACACCTTCCTGGACCTGACGGTGCAGCAGATCGAGCACTTAAACAAGACGTTCAACACAGACGTTCCGCTGGTGCTCATGAACTCCTTC]
[+] EMBL BU804537 [ ACATGAAGTGAAAGGTTCTGCCGGTTCTTTTGGTGTTGACGGTACCTCGACCCGGCTCCCGGTGATCCATGTCGTTCCTGGTGCGTCTCTGAGC CTCCGCCCGAACTTTGACAGTTTTCAGGTCTGACCAGAGGAGGAGCCATGACGGAGTTCCAGGAG AAGCTTCGGCA GCAGCACGAGGA GTCGCTGCACC GTGAGCTAGAGGCACTGCTCAGTACCGCCGACCATGCTGACGCACAGAGCAGC AG AAAAGACTTCCAAGGCTTCCA GAAGCTCTTTCACAGGTTCCTGCAGGTCAAAGGTCCTTCGGTGGAATGGTCCAAGATCAATCGGCCACCGGAGCAGTCGGTTCAACCTTATGAGAAGATCAAAGCC AAAGGACTTCCTGCTGACATCAGCACCTGCCTCAGCAAGCTGGCGGTGGTCAAGCTCAACGGGGGAC TGGGCACCAGCAT GG ]
[+] EMBL BU804605 [ CATGAAGTGAAAGGTTCTGCCGGTTCTTTTGGTGTCGACGGTACCTCGACCCGGCTCCCGGTGATCCATGTCGTTCCTGGTGCGTCTCTGAGC CTCCGCCCGAACTTTGACAGTTTTCAGGTCTGACCAGAGGAGGAGCCATGACGGAGTTCCAGGAG AAGCTTCGGCA GCAGCACGAGGA GTCGCTGCACC GTGAGCTAGAGGCACTGCTCAGTACCGCCGACCATGCTGACGCACAGAGCAGC AGTTATAGACTTCCAAGGCTTCCA GAAGCTCTTTCACAGGTTCCTGCAGGTCAAAGGTCCTTCGGTGGAATGGTCCAAGATCAATCGGCCACCGGAGCAGTCGGTTCAACCTTATGAGAAGATCAAAGCC AAAGGACTTCCTGCTGACATCAGCACCTGCCTCAGCAAGCTGGCGGTGGTCAAGCTCAACGGGGGAC TGGGCACCAGCAT GGGCT ]
[+] EMBL BU805335 [ AAGTGAAAGGTTCTGCCGGTTCTTTTGGTGTTGACGGTACCTCGACCCGGCTCCCGGTGATCCATGTCGTTCCTGGTGCGTCTCTGAGC CTCCGCCCGAACTTTGACAGTTTTCAGGTCTGACCAGAGGAGGAGCCATGACGGAGTTCCAGGAG AAGCTTCGGCA GCAGCACGAGGA GTCGCTGCACC GTGAGCTAGAGGCACTGCTCAGTACCGCCGACCATGCTGACGCACAGAGCAGCTTTT TTTTGACTTCCAAGGCTTCCA GAAGCTCTTTCGCAGGTTCCTGCAGGTCAAAGGTCCTTCGGTGGAATGGTCCAAGATCAATCGGCCACCGGAGCAGTCGGTTCAACCTTATGAGAAGATCAAAGCC AAAGGACTTCCTGCTGACATCAGCACCTGCCTCAGCAAGCTGGCGGTGGTCAAGCTCAACGGGGGAC TGGGCACCAGCAT GGGCTGCAAAGGCCCCAAGAGTCTGATCAGC ]
[+] EMBL BU804926 [ CTGCCGGTTCTTTTGGTGTTGACGGTACCTCGACCCGGCTCCCGGTGATCCATGTCGTTCCTGGTGCGTCTCTGAGC CTCCGCCCGAACTTTGACAGTTTTCAGGTCTGACCAGAGGAGGAGCCATGACGGAGTTCCAGGAG AAGCTTCGGCA GCAGCACGAGGA GTCGCTGCACC GTGAGCTAGAGGCACTGCTCAGTACCGCCGACCATGCTGACGCACAGAGCAGC AG AAAAGACTTCCAAGGCTTCCA GAAGCTCTTTCACAGGTTCCTGCAGGTCAAAGGTCCTTCGGTGGAATGGTCCAAGATCAATCGGCCACCGGAGCAGTCGGTTCAACCTTATGAGAAGATCAAAGCC AAAGGACTTCCTGCTGACATCAGCACCTGCCTCAGCAAGCTGGCGGTGGTCAAGCTCAACGGGGGAC TGGGCACCAGCAT GGGCTG ]
[+] EMBL FR0063640 [ CGGTTCTTTTGGTGTTGACGGTACCTCGACCCGGCTCCCGGTGATCCATGTCGGTGGGGGTGCGTCTCTGAGC CTCCGCCCGAACTTTGACAGTTTTCAGGTCTGACCAGAGGAGGAGCCATGACGGAGTTCCAGGAG AAGCTTCGGCA GCAGCACGAGGA GTCGCTGCACC GTGAGCTAGAGGCACTGCTCAGTACCGCCGACCATGCTGACGCACAGAGCAGC AG AAAAGACTTCCAAGGCTTCCA GAAGCTCTTTCACAGGTTCCTGCAGGTCAAAGGTCCTTCGGTGGAATGGTCCAAGATCAATTCGGCACCGGAGCAGTCGGGTCAACCTTATGAGAAGATCAAAGCC AAAGGACTTCC ]
[+] EMBL BU806717 [ TTCTTTTGGTGTTGACGGTACCTCGACCCGGCTCCCGGTGATCCATGTCGTTCCTGGTGCGTCTCTGAGC CTCCGCCCGAACTTTGACAGTTTTCAGGTCTGACCAGAGGAGGAGCCATGACGGAGTTCCAGGAG AAGCTTCGGCA GCAGCACGAGGA GTCGCTGCACC GTGAGCTAGAGGCACTGCTCAGTACCGCCGACCATGCTGACGCACAGAGCAGC AG AAAAGACTTCCAAGGCTTCCA TAAGCTCTTTCACAGGTTCCTGCAGGTCAAAGGTCCTTCGGTGGAATGGTCCAAGATCAATCGGCCACCGGAGCAGTCGGTTCAACCTTATGAGAAGATCAAAGCC AAAGGACTTCCTGCTGACATCAGCACCTGCCTCAGCAAGCTGGCGGTGGTCAAGCTCAACGGGGGAC TGGGCACCAGCAT GGGCTGCAAAGGCCCCAAGAGTCTGATCAGCGTTCGCAATGAGAACACCTTCCTGGGCCTGACGGTGCAGCAG ]
[+] EMBL BU805240 [ TTCTTTTGGTGTTGACGGTACCTCGACCCGGCTCCCGGTGATCCATGTCGTTCCTGGTGCGTCTCTGAGC CTCCGCCCGAATTTTGACAGTTTTCAGGTCTGACCAGAGGAGGAGCCATGACGGAGTTCCAGGAG AAGCTTCGGCA GCAGCACGAGGA GTCGCTGCACC GTGAGCTAGAGGCACTGCTCAGTACCGCCGACCATGCTGACGCACAGAGCAGC AG AAAAGACTTCCAAGGCTTCCA GAAGCTCTTTCACAGGTTCCTGCAGGTCAAAGGTCCTTCGGTGGAATGGTCCAAGATCAATCGGCCACCGGAGCAGTCGGTTCAACCTTATGAGAAGATCAAAGCC AAAGGACTTCCTGCTGACATCAGCACCTGCCTCAGCAAGCTGGCGGTGGTCAAGCTCAACGGGGGAC TGGGCACCAGCAT GGGCTGCAAAGGCCCCAAGAGTCTG ]
[+] EMBL FR0063717 [ TTTGGCGATGACGGGACCTCGACCCGCCTCCCGGCGAACCATGCCGTTCCTGGTGCGTCTCTGAGC CTCCGCCCGAACTTGGACAGTTTTCAGGTCTGACCAGAGGCGGAGCCATGACGGAGCTCCAGGAG AAGCTTCGGCA GCAGCATGAGGA GACGCTGCACC GTGAGCTAGAGGCACTGCTCAGTACCGCCGACCATGCTGACGCACAGAGCAGC AG AAAAGACTTCCAAGGCTTCCA GAAGCTCTTTCACAGGTTCCTGCAGGGCAAAGGACCTTCGGAGGAGACGGCCAAGATCAATCGACCACCGGAGCAGTCGGGTCAACCTTATGAGAAGATCAAAGCC AAAGGACTTCCTGCTGACATCAGCACCTGCCTCAGCAAGCTGGGGGGGGGCAAGCTCAACGG ]
[+] EMBL FR0063690 [ TGGCGTTGACGGTACCTCGACCCGGCTCCCGGTGATCCATGTCGATCCTGGGGCGTCTCTGAGC CTCCGCCCGAACTTTGACAGTTTTCAGGTCTGACCAGAGGAGGAGCCATGACGGAGTTCCAGGAG AAGCTTCGGCA GCAGCACGAGGA GACGCTGCACC GTGAGCTAGAGGCACTGCTCAGTACCGCCGACCATGCTGACGCACAGAGCAGC AG AAAAGACTTCCAAGGCTTCCA GAAGCTCTTTCACAGGTTCCTGCAGGTCAAAGGTCCTTCGGTGGAATGGGCCAAGATCAATCGGGCACCGGAGCAGGCGGTTCAACCTTATGAGAAGATCAAAGCC AGAGGACTTCCTGCTGACATCAGCACCTGCCTCAGCAAG ]
[+] EMBL FR0063683 [ TTGACGGTACCTCGACCCGGCTCCCGGTGATCCATGTCGTTCCTGGTGCGTCTCTGAGCGCTCCGCCCGAACTTTGACAGTTTTCAGGTCTGACCAGAGGAGGAGCCATGACGGAGTTCCAGGAG AAGCTTCGGCA GCAGCACGAGGA GTCGCTGCACC GTGAGCTAGAGGCACTGCTCAGTACCGCCGACCATGCTGACGCACAGAGCAGC AG AAAAGACTTCCAAGGCTTCCA GAAGCTCTTTCACAGGCTCCTGCAGGTCAAAGGTCCTTCGGTGGAAATGGCCAAGATCAATCGGCCACCGGAGCAGTCCGGTCAAC ]
[+] EMBL BU805097 [ TGACGGTACCTCGACCCGGCTCCCGGTGATCCTTGCCGTTCCTGGTGCGTCTCTGAGC CTCCGCCCGAACTTTGACAGTTTTCAGGTCTGACCAGAGGAGGAGCCATGACGGAGTTCCAGGAG AAGCTTCGGCA GCAGCACGAGGA GTCGCTGCACC GTGAGCTAGAGGCACTGCTCAGTACCGCCGACCATGCTGACGCACAGAGCAGC AG AAAAGACTTCCAAGGCTTCCA GAAGCTCTTTCACAGGTTCCTGCAGGTCAAAGGTCCTTCGGTGGAATGGTCCAAGATCAATCGGCCACCGGAGCAGTCGGTTCAACCTTATGAGAAGATCAAAGCC AAAGGACTTCCTGCTGACATCAGCACCTGCCTCAGCAAGCTGGCGGTGGTCAAGCTCAACGGGGGAC TGGGCACCAGCAT GGGCTGCAAAGGCCCC ATAGTCTGATCAGCGTT ]
[+] EMBL BU806776 [ GACGGTACCTCGACCCGGCTCCCGGTGATCCATGTCGTTCCTGGTGCGTCTCTGAGC CTCCGCCCGAACTTTGACAGTTTTCAGGTCTGACCAGAGGAGGAGCCATGACGGAGTTCCAGGAG AAGCTTCGGCA GCAGCACGAGGA GTCGCTGCACC GTGAGCTAGAGGCACTGCTCAGTACCGCCGACCATGCTGACGCACAGAGCAGC AG AAAAGACTTCCAAGGCTTCCA GAAGCTCTTTCACAGGTTCCTGCAGGTCAAAGGTCCTTCGGTGGAATGGTCCAAGATCAATCGGCCACCGGAGCAGTCGGTTCAACCTTATGAGAAGATCAAAGCC AAAGGACTTCCTGCTGACATCAGCACCTGCCTCAGCAAGCTGGCGGTGGTCAAGCTCAACGGGGGAC TGGGCACCAGCAT GGGCTGCAAAGGCCCCAAGAG ]
[+] EMBL FR0063591 [ ACCCGGCTCCCGGTGATCCATGTCGTTCCTGGGGCGTCTCTGAGC CTGCGCCCGAACTTTGACAGTTTTCAGGTCTGACCAGAGGAGGAGCCATGACGGAGTTCCAGGAG AAGCTTCGGCA GCAGCACGAGGA GTCGCTGCACC GTGAGCTAGAGGCACTGCTCAGTACCGCCGACCATGCTGACGCACAGAGCAGC AG AAAAGACTTCCAAGGCTTCCA GAAGCTCTTTCACAGGGTCCTGCAGGTCAAAGGGCCTTCGGTGGAATGGGCCAAGATCAATCGGCCACCGGAGCAGTCGGTTCAACCTTATGAGAAGATCAAAGCC AAAGGACTTCCTGCTGACATCAGCACCTGCCTCAGCAAGCTTGCGGGGGGCAA ]
[+] EMBL FR0064092 [ CGGCTCCCGGAGATCCATGTCGTTCTTGGTGCGTCTCTGAGC CTCCGCCCGAACTTTGACAGTTTTCAGGTCTGACCAGACGAGGAGCCATGACGGAGTTCCAGGAG AAGCTTCGGCA GCAGCACGAGGA GTCGCTGCACC GTGAGCTAGAGGCACTGCTCAGTACCGCCGACCATGCTGACGCACAGAGCAGC AG AAAAGACTTCCAAGGCTTCCA GAAGCTCTTTCACAGGTTCCTGCAGGTCAAAGGTCCTTCGGTGGAATGGTCCAAGATCAATCGGCCACCGGAGCAGTCTGTTCAACCTTATGAGAAGATCAAAGCCAAAAGGACTTCCTGCTGACATCAGCACCTGCCT ]
[+] EMBL FR0063769 [ CGGCT CCGGTGATCCATGTCGTTCCTGGTGCGTCTCTGAGC CTCCGCCCGAACTTTGACAGTTTTCAGGTCTGACCAGAGGAGGAGCCATGACGGAGTCGCAGGAGAAAGCTTCGGCAGGCAGCACGAGGAGGTCGCTGCACCGGGTGAGCTAGAGGCACTGCTCAGTACCGCCGACCATGCTGACGCACAGAGCAGC AG AAAAGACTTCCAAGGCTTCCA GAAGCTCTTTCACAGGTTCCTGCAGGTCAAAGGTCCTTCGGTGGAATGGTCCAAGATCAATCGG CACCGGAGCAGTCGGGTCAACCTTATGAGGAGATCAAAGCC AAAGGACTTCCTGCTGACATCAGCACCTGCCTCAGCAAGCTGGCGGTGGTC ]
[+] EMBL FR0063321 [ CGGCTCCCGGTGATCCATGTCGTTCCTGGTGCGTCTCTGAGC CTCCGCCCGAACTTTGACAGTTTTCAGGTCTGACCAGAGGAGGAGCCATGACGGAGTTCCAGGAG AAGCTTCGGCA GCAGCACGAGGA GTCGCTGCACC GTGAGCTAGAGGCACTGCTCAGTACCGCCGACCATGCTGACGCACAGAGCAGC AG AAAAGACTTCCAAGGCTTCCA GAAGCTCTTTCACAGGTTCCTGCAGGGCAAAGGTCCTTCGGTGGAAATGGCCAAGATCAATCGGCCACCGGAGCAGTCGGTTCAACCTTATGAGAAGATCAAAGCC AAAGGACTTCCTGCTGACATCAGCACCTGCCTCAGCAAGCTGGCGGAGGTCAAGCTCAACGGGGGACTTGGGCACCAGCATGGGGCTGCAAAGGCCCCAAGAGTCT ]
[+] EMBL BU806655 [ GCTCCCGGTGATCCATGTCGTTCCTGGTGCGTCTCTGAGC CTCCGCCCGAACTTTGACAGTTTTCAGGTCTGACCAGAGGAGGAGCCATGACGGAGTTCCAGGAG AAGCTTCGGCA GCAGCACGAGGA GTCGCTGCACC GTGAGCTAGAGGCACTGCTCAGTACCGCCGACCATGCTGACGCACAGAGCAGC AG AAAAGACTTCCAAGGCTTCCA GAAGCTCTTTCACAGGTTCCTGCAGGTCAAAGGTCCTTCGGTGGAATGGTCCAAGATCAATCGGCCACCGGAGCAGTCGGTTCAACCTTATGAGAAGATCAAAGCC AAAGGACTTCCTGCTGACATCAGCACCTGCCTCAGCAAGCTGGCGGTGGTCAAGCTCAACGGGGGAC TGGGCACCAGCAT GGGCTGCAAAGGCCCCAAGAGTCTGATC ]
[+] EMBL BU805293 [ CCGGTGACCCATGTCGTTCCTGGTGCGTCTCTGAGC CTCCGCCCGAACTTTGACAGTTTTCAGGTCTGACCAGAGGAGGAGCCATGACGGAGTTCCAGGAG AAGCTTCGGCA GCAGCACGAGGA GTCGCTGCACC GTGAGCTAGAGGCACTGCTCAGTACCGCCGACCATGCTGACGCACAGAGCAGC AG AAAAGACTTCCAAGGCTTCTATTTAGTCTCTTTCACAGGTTCCTGCAGGTCAAAGGTCCTTCGGTGGAATGGTCCAAGATCAATCGGCCACCGGAGCAGTCGGTTCAACCTTATGAGAAGATCAAAGCC AAAGGACTTCCTGCTGACATCAGCACCTGCCTCAGCAAGCTGGCGGTGGTCAAGCTCAACGGGGGAC TGGGCACCAGCAT GGGCTGCAAAGGCCCCAAGAGTCTGATCAGCGTTCGCAATGAGAACACCTTCCTGGACCTGACGGTGCAGCAGATCGAGCACTTAAACAAGACGTTCAAC ]
[+] EMBL BU805278 [ CCGGTGATCCATGTCGTTCCTGGTGCGTTTCTGCGC CTCCGCCCGAACTTTGACAGTTTTCAGGTCTGACCAGAGGAGGAGCCATGACGGAGTTCCAGGAG AAGCTTCGGCA GCAGCACGAGGA GTCGCTGCACC GTGAGCTAGAGGCACTGCTCAGTACCGCCGACCATGCTGACGCACAGAGCAGC AG AAAAGACTTCCAAGGCTTCCA GAAGCTCTTTCACAGGTTCCTGTATGTTTAAGGTCCTTCGGTGGAATGGTCCAAGATCAATCGGCCACCGGAGCAGTCGGTTCAACCTTATGAGAAGATCAAAGCC AAAGGACTTCCTGCTGACATCAGCACCTGCCTCAGCAAGCTGGCGGTGGTCAAGCTCAACGGGGGAC TGGGCACCAGGAT GGGCTGCAAAGGCCCCAAGAGTCTGATCAGCGGTCGCAATGAG ]
[+] EMBL BU806793 [ CCGGTGATCCATGTCGTTCCTGGTGCGTCTCTGAGC CTCCGCCCGAACTTTGACAGTTTTCAGGTCTGACCAGAGGAGGAGCCATGACGGAGTTCCAGGAG AAGCTTCGGCA GCAGCACGAGGA GTCGCTGCACC GTGAGCTAGAGGCACTGCTCAGTACCGCCGACCATGCTGACGCACAGAGCAGC AG AAAAGACTTCCAAGGCTTCCA GAAGCTCTTTCACAGGTTCCTGCAGGTCAAAGGTCCTTCGGTGGAATGGTCCAAGATCAATCGGCCACCGGAGCAGTCGGTTCAACCTTATGAGAAGATCAAAGCC AAAGGACTTCCTGCTGACATCAGCACCTGCCTCAGCAAGCTGGCGGTGGTCAAGCTCAACGGGGGAC TGGGCACCAGCAT GGGCTGCAAAGGCCCCAAGAGTCTGATCAGCGTTCGCAATGA ]
[+] EMBL BU806823 [ CCGGTGATCCATGTCGTTCCTGGTGCGTCTCTGAGC CTCCGCCCGAACTTTGACAGTTTTCAGGTCTGACCAGAGGAGGAGCCATGACGGAGTTCCAGGAG AAGCTTCGGCA GCAGCACGAGGA GTCGCTGCACC GTGAGCTAGAGGCACTGCTCAGTACCGCCGACCATGCTGACGCACAGAGCAGC AG AAAAGACTTCCAAGGCTTCCA GAAGCTCTTTCACAGGTTCCTGCAGGTCAAAGGTCCTTCGGTGGAATGGTCCAAGATCAATCGGCCACCGGAGCAGTCGGTTCAACCTTATGAGAAGATCAAAGCC AAAGGACTTCCTGCTGACATCAGCACCTGCCTCAGCAAGCTGGCGGTGGTCAAGCTCAACGGGGGAC TGGGCACCAGCAT GGGCTGCAAAGGCCCCAAGAGTCTGATCAGCGTTCGCAATGA ]
[+] EMBL BU805480 [ CCGGTGATCCATGTCGTTCCTGGTGCGTCTCTGAGC CTCCGCCCGAACTTTGACAGTTTTCAGGTCTGACCAGAGGAGGAGCCATGACGGAGTTCCAGGAG AAGCTTCGGCA GCAGCACGAGGA GTCGCTGCACC GTGAGCTAGAGGCACTGCTCAGTACCGCCGACCATGCTGACGCACAGAGCAGC AG AAAAGACTTCCAAGGCTTCCA GAAGCTCTTTCACAGGTTCCTGCAGGTCAAAGGTCCTTCGGTGGAATGGTCCAAGATCAATCGGCCACCGGAGCAGTCGGTTCAACCTTATGAGAAGATCAAAGCC AAAGGACTTCCTGCTGACATCAGCACCTGCCTCAGCAAGCTGGCGGTGGTCAAGCTCAACGGGGGAC TGGGCACCAGCAT GGGCTGCAAAGGCCCCAAGAGTCTGATCAGCGTTCGCAATGAGAACA ]
[+] EMBL BU805459 [ CCGGTGATCCATGTCGTTCCTGGTGCGTCTCTGAGC CTCCGCCCGAACTTTGACAGTTTTCAGGTCTGACCAGAGGAGGAGCCATGACGGAGTTCCAGGAG AAGCTTCGGCA GCAGCACGAGGA GTCGCTGCACC GTGAGCTAGAGGCACTGCTCAGTACCGCCGACCATGCTGACGCACAGAGCAGC AG AAAAGACTTCCAAGGCTTCCA GAAGCTCTTTCACAGGTTCCTGCAGGTCAAAGGTCCTTCGGTGGAATGGTCCAAGATCAATCGGCCACCGGAGCAGTCGGTTCAACCTTATGAGAAGATCAAAGCC AAAGGACTTCCTGCTGACATCAGCACCTGCCTCAGCAAGCTGGCGGTGGTCAAGCTCAACGGGGGAC TGGGCACCAGCAT GGGCTGCAAAGGCCCCAAGAGTCTGATCAGCGTTCGCAATGAGAACACCTTCCT ]
[+] EMBL BU805388 [ CCGGTGATCCATGTCGTTCCTGGTGCGTCTCTGAGC CTCCGCCCGAACTTTGACAGTTTTCAGGTCTGACCAGAGGAGGAGCCATGACGGAGTTCCAGGAG AAGCTTCGGCA GCAGCACGAGGA GTCGCTGCACC GTGAGCTAGAGGCACTGCTCAGTACCGCCGACCATGCTGACGCACAGAGCAGC AG AAAAGACTTCCAAGGCTTCCA TAAGCTCTTTCACAGGTTCCTGCAGGTCAAAGGTCCTTCGGTGGAATGGTCCAAGATCAATCGGCCACCGGAGCAGTCGGTTCAACCTTATGAGAAGATCAAAGCC AAAGGACTTCCTGCTGACATCAGCACCTGCCTCAGCAAGCTGGCGGTGGTCAAGCTCAACGGGGGAC TGGGCACCAGCAT GGGCTGCAAAGGCCCCAAGAGTCTGATCAGCGTT ]
[+] EMBL BU804592 [ CCGGTGATCCATGTCGTTCCTGGTGCGTCTCTGAGC CTCCGCCCGAACTTTGACAGTTTTCAGGTCTGACCAGAGGAGGAGCCATGACGGAGTTCCAGGAG AAGCTTCGGCA GCAGCACGAGGA GTCGCTGCACC GTGAGCTAGAGGCACTGCTCAGTACCGCCGACCATGCTGACGCACAGAGCAGC AG AAAAGACTTCCAAGGCTTCCA GAAGCTCTTTCACAGGTTCCTGCAGGTCAAAGGTCCTTCGGTGGAATGGTCCAAGATCAATCGGCCACCGGAGCAGTCGGTTCAACCTTATGAGAAGATCAAAGCC AAAGGACTTCCTGCTGACATCAGCACCTGCCTCAGCAAGCTGGCGGTGGTCAAGCTCAACGGGGGAC TGGGCACCAGCAT GGGCTGCAAAGGCCCCAAGAGTCTGATCAGCGTTCGCAATG ]
[+] EMBL FR0063802 [ CATGTCGTTCCTGGTGCGTCTCTGAGC CTCCGCCCGAACTTTGACAGTTTTCAGGTCTGACCAGAGGAGGAGCCATGACGGAGTTCCAGGAG AAGCTTC GCA GCAGCACGAGGA GTCGCTGCACC GTGAGCTAGAGGCACTGCTCAGTACCGCCGACCATGCTGACGCACAGAGCAGC AG AAAAGACTTCCAAGGCTTCCA GAAGCTCTTTCACAGGTTCCTGCAGGTCAAAGGTCCTTCGGTGGAATGGTCCAAGATCAATCGGCCACCGGAGCAGTCGGTTCAACCTTATGAGAAGATCAAAGCC AAAGGACTTCCTGCTGACATCAGCACCTGCCTCAGCAAGCTGGCGGNGGTCAAGCTCAACTGGGGAC TGGGCACCAGCAT GGGCTGCAAAGGCCCCAAGAGTCTGATCAGCGTTCGCAATGAGAACACCTTCCTGGACCTGACNGTGCAGCAGATCGAGCACTTAAACAAGACGTTCAACACAGACGTTCCGCTGGNGCTCATGAACTC ]
[+] EMBL FR0063741 [ GTTCCTGGTGCGTCTCTGAGC CTCCGCCCGAACTGGGACAGTTTTCAGGTCTGACCAGAGGAGGAGCCATGACGGAGTTCCAGGAG AAGCTTCGGCA GCAGCACGAGGA GTCGCTGCACC GTGAGCTAGAGGCACTGCTCAGTACCGCCGACCATGCTGACGCACAGAGCAGC AG AAAAGACTTCCAAGGCTTCCA GAAGCTCTTTCACAGGCTCCTGCATGGCAAAGGTCCTTCGGTGGAATGGTCCAAGATCAATCGTCCACCGGAGCAGTCGTTTCAACCTTATGAGAAGATCAAAGCC AAAGGACTTCCTGCTGACATCAGCACCTGCCTCAGCAAGCTGTCGGGGGCCAA ]
[+] EMBL BU804803 [ CTCTGAGC CTCCGCCCGAACTTTGACAGTTTTCAGGTCTGACCAGAGGAGGAGCCATGACGGAGTTCCAGGAG AAGCTTCGGCA GCAGCACGAGGA GTCGCTGCACC GTGAGCTAGAGGCACTGCTCAGTACCGCCGACCATGCTGACGCACAGAGCAGC AG AAAAGACTTCCAAGGCTTCCA GAAGCTCTTTCACAGGTTCCTGCAGGTCAAAGGTCCTTCGGTGGAATGGTCCAAGATCAATCGGCCACCGGAGCAGTCGGTTCAACCTTATGAGAAGATCAAAGCC AAAGGACTTCCTGCTGACATCAGCACCTGCCTCAGCAAGCTGGCGGTGGTCAAGCTCAACGGGGGAC TGGGCACCAGCAT GGGCTGCAAAGGCCCCAAGAGTCTGATCAGCGTTCGCAATGAGAACACCTTCCTGGACCT ]
[+] EMBL BU805057 [ AACTTTGACAGTTTTCAGGTCTGACCAGAGGAGGAGCCATGACGGAGTTCCAGGAG AAGCTTCGGCA GCAGCACGAGGA GTCGCTGCACC GTGAGCTAGAGGCACTGCTCAGTACCGCCGACCATGCTGACGCACAGAGCAGC AG AAAAGACTTCCAAGGCTTCCA GAAGCTCTTTCACAGGTTCCTGCAGGTCAAAGGTCCTTCGGTGGAATGGTCCAAGATCAATCGGCCACCGGAGCAGTCGGTTCAACCTTATGAGAAGATCAAAGCC AAAGGACTTCCTGCTGACATCAGCACCTGCCTCAGCAAGCTGGCGGTGGTCAAGCTCAACGGGGGAC TGGGCACCAGCAT GGGCTGCAAAGGCCCCAAGAGTCTGATCAGCGTTCGCAATGAGAACACCTTCCTGGACCTGACGGTGCAGCAGATCGAGCACTTAAACAAGACGTTCAACAC ]
consensusID : consensus_2879#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 593 fasta sequence
[GGTGGACGCCTGTTGTTCTCTGACAGCTGCTGTGGGACAGTTAAAGGGACAAATTCATGCACGTCTGACTCAAACA--CACCACTGCTGCTGGTCTCCTAGTTATT-GCAGACACCGGTGAAATGTATCTTTCTTTAGTTGGTCTGACCAGAGGAGGAGCCATGACGGAGTTCCA-GGAGAAGCTTCGGCAGCAGCACGAGGAGTCGCTGCACCGTGAGCTAGAGGCACTGCTCAGTACCGCCGACCATGCTGACGCACAGAGCAGCAGAAAAGACTTCCAAGGCTTCCAGAAGCTCTTTCACAGGTTCCTGCAGGTCAAAGGTCCTTCGGTGGAATGGTCCAAGATCAATCGGCCACCGGAGCAGTCGGTTCAACCTTATGAGAAGATCAAAGCCAAAGGACTTCCTGCTGACATCAGCACCTGCCTCAGCAAGCTGGCGGTGGGTCAAGCTCAACGGGGGACTGGGCACCAGCATGGGCTGCAAAGGCCCCAAGAGTCTGATCAGCGTTCGCAATGAGAACACCTTCCTGGACCTGACGGTGCAGCATATCGAGCACTTAAACAAGACGTTCAACACAGACGTTCCGCTGGTGCT]
[+] EMBL BU805604 [GGTGGACGCCTGTTGTTCTCTGACAGCTGCTGTGGGACAGTTAAAGGGACAAATTCATGCACGTCTGACTCAAACA CACCACTGCTGCTGGTCTCCTAGTTATT GCAGACACCGGTGAAATGTATCTTTCTTTAGTTGGTCCGACCAGAGGAGGAGCCATGACGGAGTTCCA GGAGAAGCTTCGGCAGCAGCACGAGGAGTCGCCGCACCGTGAGCTAGAGGCACTGCTCAGTACCGCCGACCATGCTGACGCACAGAGCAGCAGAAAAGACTTCCAAGGCTTCCAGAAGCTCTTTCACAGGTTCCTGCAGGTCAAAGGTCCTTCGGTGGAATGGTCCAAGATCAATCGGCCACCGGAGCAGTCGGTTCAACCTTATGAGAAGATCAAAGCCAAAGGACTTCCTGCTGACATCAGCACCTGCCTCA CAAGCTGGCGGTGAGTCAAGCTCAACGGGGGACTGGGCACCAGCATGGGCTGCAAAGGCCCCAAGAGTCTGATCAGCGTTCGCAATGAGAACACCTTCCTGGACCTGACGGTGCAGCATATCGAGCACTTAAACAAGACGTTCAACACAGACGTTCCGCTGGTGCT]
[+] EMBL BU806742 [ TTCTCTGACAGCTGCTGTGGGACAGTTAAAGGGACAAATTCATGCACGTCTGACTCAAACA CACCACTGCTGCTGGTCTCCTAGTTATT GCAGACACCGGTGAAATGTATCTTTCTTTAGTTGGTCTGACCAGAGGAGGAGCCATGACGGAGTTCCA GGAGAAGCTTCGGCAGCAGCACGAGGAGTCGCTGCACCGTGAGCTAGAGGCACTGCTCAGTACCGCCGACCATGCTGACGCACAGAGCAGCAGAAAAGACTTCCAAGGCTTCCAGAAGCTCTTTCACAGGTTCCTGCAGGTCAAAGGTCCTTCGGTGGAATGGTCCAAGATCAATCGGCCACCGGAGCAGTCGGTTCAACCTTATGAGAAGATCAAAGCCAAAGGACTTCCTGCTGACATCAGCACCTGCCTCAGCAAGCTGGCGGT GGTCAAGCTCAACGGGGGACTGGGCACCAGCA ]
[+] EMBL FR0064052 [ CTGACAGCTGCTGTGGGACAGTTAAAGGTTCAAATTCATGCACGTCTGACTCAAACG CACCACTGCTGCTGGTCTCCTAGTTATTCGCAGACACCGGTGAAATGTATCTTTCTTTAGTTGGTCTGACCAGAGGAGGAGCCATGACGGAGTTCCA GGAGAAGCTTCGGCAGCAGCACGAGGAGTCGCTGCACCGTGAGCTAGAGGCACTGCTCAGTACCGCCGACCATGCTGACGCACAGAGCAGCAGAAAAGACTTCCAAGGCTTCCAGAAGCTCTTTCACAGGTTCCTGCAGGTCAAAGGTCCTTCGGTGGAATGGTCCAAGATCAATCGGCCACCGGAGCAGTCGGTTCAACCTTATGAGAAGATCAAAGCCAAAGGACTTCCTGCTGACATCAGCACCTGCCTCAGCAAGCTGGCG TGGNCAAGCTCAACGGGGac ]
[+] EMBL FR0064036 [ GCTGTGGGACAGTTAAAGGGTTAAATTCATGCACGTCTGACTCAAACAGCGACCACTGCTTGCTGGCTCCTAGTTATC GCAGACACCGGNGAAATGTATCTTTCTTTAGGTGGTCTGACCAGAGGAGGAGCCATGACGGAGTTCCAGGGAGAAGCTTCTGGAGCAGCACGAGAAGTCGCTGCACCGTGAGCTAGAGGCACTGCTTAGTACCGCCGACCATGCTGACGCACAGAGCAGCAGAAAAGACTTCCAAGGCTTCCAGAAGCTCTTTCACAGGTTCCTGCAGGTCAAAGGTCCTTCGGTGGAA ]
[+] EMBL FR0062660 [ GGGACAAATTCATGCACGTCTGACTCAAACA CACCACTGCTGCTGGTCTCCTAGTTATT GCAGACACCGGTGAAATGTATCTTTCTTTAGTTGGTCTGACCAGAGGAGGAGCCATGACGGAGTTCCA GGAGAAGCTTCGGCAGCAGCACGAGGAGTCGCTGCACCGTGAGCTAGAGGCACTGCTCAGTACCGCCGACCATGCTGACGCACAGAGCAGCAGAAAAGACTTCCAAGGCTTCCAGAAGCTCTTTCACAGGTTCCTGCAGGTCAAAGGTCCTTCGGTGGAATGGGCCAAGATCAATCGGCCACCGGAGCAGTCGGGTCAACCTTATGAGAAGAT ]
consensusID : consensus_2879#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 328 fasta sequence
[TGCAATGTTTCTGTTCAGGTTCAACCTTATGAGAAGATCAAAGCCAAAGGACTTCCTGCTGACATCAGCACCTGCCTCAGCAAGCTGGCGGTGGTCAAGCTCAACGGGGGACTGGGCACCAGCATGGGCTGCAAAGGCCCCAAGAGTCTGATCAGCGTTCGCAATGAGAACACCTTCCTGGACCTGACGGTGCAGCAGATCGAGCACTTAAACAAGACGTTCAACACAGACGTTCCGCTGGTGCTCATGAACTCCTTCAATACTGATGATGATACCAAGAAGATCCTCCAGAAATACAAACATCACCGCGTCAACATCCACACCTTCA]
[+] EMBL FR0062648 [TGCAATGTTTCTGTTCAGGTTCAACCTTATGAGAAGATCAAAGCCAAAGGACTTCCTGCTGACATCAGCACCTGCCTCAGCAAGCTGGCGGTGGTCAAGCTCAACGGGGGACTGGGCACCAGCATGGGCTGCAAAGGCCCCAAGAGTCTGATCAGCGTTCGCAATGAGAACACCTTCCTGGACCTGACGGTGCAGCAGATCGAGCACTTAAACAAGACGTTCAACACAGACGTTCCGCTGGTGCTCATGAACTCCTTCAATACTGATGATGATACCAAGAAGATCCTCCAGAAATACAAACATCACCGCGTCAACATCCACACCTTCA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_2879#0 AAGTACCAGGTTAC-ATGAAGTGAAAGGTTCTGCCGGTTCTTTTG-GTGTTGACGGTACC 58
consensus_2879#1 -GGTGGACGCCTGTTGTTCTCTGACAGCTGCTGTGGGACAGTTAAAGGGACAAATTCATG 59
consensus_2879#2 ------------------------------------------------------------
consensus_2879#0 TCGACCCGGCTCCCGGTGATCCATGTCGTT--CCTGGTGCGTCTCTGAGCCTCCGCCCGA 116
consensus_2879#1 CACGTCTGACTCAAACACACCACTGCTGCTGGTCTCCTAGTTATTGCAGACACCGGT-GA 118
consensus_2879#2 ------------------------------------------------------------
consensus_2879#0 ACTTTGACAGTTTTCAG---GTCTGACCAGAGGAGGAGCCATGACGGAGTTCCAGGAGAA 173
consensus_2879#1 AATGTATCTTTCTTTAGTTGGTCTGACCAGAGGAGGAGCCATGACGGAGTTCCAGGAGAA 178
consensus_2879#2 ------------------------------------------------------------
consensus_2879#0 GCTTCGGCAGCAGCACGAGGAGTCGCTGCACCGTGAGCTAGAGGCACTGCTCAGTACCGC 233
consensus_2879#1 GCTTCGGCAGCAGCACGAGGAGTCGCTGCACCGTGAGCTAGAGGCACTGCTCAGTACCGC 238
consensus_2879#2 ------------------------------------------------------------
consensus_2879#0 CGACCATGCTGACGCACAGAGCAGCAGAAAAGACTTCCAAGGCTTCCAGAAGCTCTTTCA 293
consensus_2879#1 CGACCATGCTGACGCACAGAGCAGCAGAAAAGACTTCCAAGGCTTCCAGAAGCTCTTTCA 298
consensus_2879#2 ------------------------------------------------------------
consensus_2879#0 CAGGTTCCTGCAGGTCAAAGGTCCTTCGGTGGAATGGTCCAAGATCAATCGGCCACCGGA 353
consensus_2879#1 CAGGTTCCTGCAGGTCAAAGGTCCTTCGGTGGAATGGTCCAAGATCAATCGGCCACCGGA 358
consensus_2879#2 ---------------------------------------------------TGCAATGTT 9
** *
consensus_2879#0 GCAGTC--GGTTCAACCTTATGAGAAGATCAAAGCCAAAGGACTTCCTGCTGACATCAGC 411
consensus_2879#1 GCAGTC--GGTTCAACCTTATGAGAAGATCAAAGCCAAAGGACTTCCTGCTGACATCAGC 416
consensus_2879#2 TCTGTTCAGGTTCAACCTTATGAGAAGATCAAAGCCAAAGGACTTCCTGCTGACATCAGC 69
* ** ****************************************************
consensus_2879#0 ACCTGCCTCAGCAAGCTGGCGGTGG-TCAAGCTCAACGGGGGACTGGGCACCAGCATGGG 470
consensus_2879#1 ACCTGCCTCAGCAAGCTGGCGGTGGGTCAAGCTCAACGGGGGACTGGGCACCAGCATGGG 476
consensus_2879#2 ACCTGCCTCAGCAAGCTGGCGGTGG-TCAAGCTCAACGGGGGACTGGGCACCAGCATGGG 128
************************* **********************************
consensus_2879#0 CTGCAAAGGCCCCAAGAGTCTGATCAGCGTTCGCAATGAGAACACCTTCCTGGACCTGAC 530
consensus_2879#1 CTGCAAAGGCCCCAAGAGTCTGATCAGCGTTCGCAATGAGAACACCTTCCTGGACCTGAC 536
consensus_2879#2 CTGCAAAGGCCCCAAGAGTCTGATCAGCGTTCGCAATGAGAACACCTTCCTGGACCTGAC 188
************************************************************
consensus_2879#0 GGTGCAGCAGATCGAGCACTTAAACAAGACGTTCAACACAGACGTTCCGCTGGNGCTCAT 590
consensus_2879#1 GGTGCAGCATATCGAGCACTTAAACAAGACGTTCAACACAGACGTTCCGCTGGTGCT--- 593
consensus_2879#2 GGTGCAGCAGATCGAGCACTTAAACAAGACGTTCAACACAGACGTTCCGCTGGTGCTCAT 248
********* ******************************************* ***
consensus_2879#0 GAACTCCTTC-------------------------------------------------- 600
consensus_2879#1 ------------------------------------------------------------
consensus_2879#2 GAACTCCTTCAATACTGATGATGATACCAAGAAGATCCTCCAGAAATACAAACATCACCG 308
consensus_2879#0 --------------------
consensus_2879#1 --------------------
consensus_2879#2 CGTCAACATCCACACCTTCA 328
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| Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |