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These datas are free for academic use only, please contact me for any other use. Takifugu rubripes see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2882#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 19 consensus length = 620 fasta sequence
[TTCTGCCTCTGCTGCCCCCCCTCCCGACTGCTGCAACCATGGCCTACAGACACACAGCAGGTCCCAGGAGCTACCTCACCTCCACCATGA-CCGAACGC-TTCGACTGCTACTACTGCCGCGACAACCTGCAGGGCAAGAAATATGTGAAGAAGGACGAGAAGCCCATATGCCCCAAGTGCTTCGAAAAGACCTGCGCCAACACCTGCGCAGAGTGCAAACGCCCCATCGGCGTCGACGCCAA-GGAGCTGCACCACAAGAACCGCTACTGGCATGAGAGCTGCTTCCGCTGCGCTAAGTGCTACAAGGGCCTGGCCTCGGAGCCCTTCAACGCCCGCGACGACGGCAAGATCATGTGCGGCAAATGCGGCGCCATACAGGACGGCAA-CCGTTGCCAGGGCTGCTACAAGGGGGTCCTGCCAGGGACTCAGAATGTGGAGTACAAGAACAAGGTGTGGCACGAGGACTGCTTCAAGTGCTTCGAATGCAAGCAGCCGATCCGCACCAAGAGCTTCCTGACCAAGGGCGACGACATCTACTGCACTTCCTGCCATGACACCAAATTTGCCAAGAAGTGCTTCCACTGCAAGAAGCCGATCAGCTCCGGGGGGCTCAGCTACCAG]
[+] EMBL CA588994 [TTCTGCCTCTGCTGCCCCCCCTCCCGACTGCTGCAACCATGGCCTACAGACACACAGCAGGTCCCAGGAGCTACCTCACCTCCACCATGA CCGAACGC TTCGACTGCTACTACTGCCGCGACAACCTGCAGGGCAAGAAATATGTGAAGAAGGACGAGAAGCCCATATGCCCCAAGTGCTTCGAAAAGACCTGCGCCAACACCTGCGCAGAGTGCAAACGCCCCATCGGCGTCGACGCCAA GGAGCTGCACCACAAGAACCGCTACTGGCATGAGAGCTGCTTCCGCTGCGCTAAGTGCTACAAGGGCCTGGCCTCGGAGCCCTTCAACGCCCGCGACGACGGCAAGATCATGTGCGGCAAATGCGGCGCCATACAGGACGGCAA CCGTTGCCAGGGCTGCTACAAGGTGGTCCTGCCAGGGACTCAGAATGTGGAGTACAAGAACAAGGTGTGGCACGAGGACTGCTTCAAGTGCTTCGAATGCAAGCAGCCGATCCGCACCAAGAGCTTCCTGACCAAGGGCGACGACATCTACTGCACTTCCTGCCATGACACCAAATTTGCCAAGAAGTGCTTCCACTGCAAGAAGCCGATCAGCTCCGGGGGGCTCAGCTACCAG]
[+] EMBL FR0062457 [ GCTGCAACCAT TTTTTCAG CACACAGCTGTTCCCAGGGGCTTTCTCACCTCCACCATGA CCGCCCGC TTCGACTGCTACTACTGCCGCGACAACCTGCAGGTCAAGAAATATGTGAAGATGGACGAGAAGCCCATATGCCCCAAGTGCTTCGAAAAGACCTGCGCCAACACCTGCGCAGAGTGCAAACGCCCCATCGGCGTCGACGCCAA GGAGCTGCACCACAAGAACCGCTACTGGCATGAGAGCTGCTTCCGCTGCGATAAGTGCTACAAGGGCCTGGCCTCGGAGCCCTTCAACGCCCGCGACGACGGCAAGATCATGTGCGGAAAATGC ]
[+] EMBL FR0063108 [ GCAACCATGGCCTACAGACACACAGCAGGTCCCAGGAGCGACCTCACCTCCACCATGA CCGAACGC TTCGACTGCTACTACTGCCGCGACAACCTGCAGGGCAAGAAATATGTGAAGAAGGACGAGAAGCCCATATGCCCCAAGTGCTTCGAAAAGACCTGCGCCAACACCTGCGCAGAGTGCAAACGCCCCATCGGCGTCGACGCCAA GGAGCTGCACCACAAGAACCGCTACTGGCATGAGAGCTGCTTCCGCTGCGCTAAGTGCTACAAGGGCCTGGCCTCGGAGCCCTTCAACGCCCGCGACGACGGCAAGATCATGTGCGGCAAATGCGGCGCCATACAGGACGGCAA CCGTTGCCAGGGCTGCTACAAGGTGGTCCTGCCAGGGACTCAGAATGTGGAGTACAAGAACAAGGTGTGGCACGAGGACTGCTTCAAGTGCTTCGAATGCAAGCAGCCGATCCGCA ]
[+] EMBL FR0062377 [ CATGGCCTACAGACACACAGCAGGTCCCAGGAGCTACCTCACCTCCAGCATGA CCGAACGC TTCGACTGCTACTACTGCCGCGACAACCTGCAGGGCAAGAAATATGTGAAGAAGGACGAGAAGCCCATATGCCCCAAGTGCTTCGAAAAGACCTGCGCCAACACCTGCGCAGAGTGCAAACGCCCCATCGGCGTCGACGCCAA GGAGCTGCACCACAAGAACCGCTACTGGCATGAGAGCTGCTTCCGCTGCGCTAAGTGCTACAAGGNGCCTGCCTCGGAGCCCTTCAACGCCCGCGACGACGGCAAGATCATGTGCGGCAAATGCGGCGCCATACAGGACGGCAA CCGTTGCCAGGGCTGCTACAAGGGGGTCCTGCCAGGGACTCAGAATGTGGAGTACAAGAACAAGGTGGGGCACGAGGACT ]
[+] EMBL FR0062477 [ ACACACAGCAGGTCCCAGGAGCTACCTCACCTCGGGGATGA CCGAACGC TTCGACTGCTACTACTGCCGCGACAACCTGCAGGGCAAGAAATATGTGAAGAAGGACGAGAAGCCCATATGCCCCAAGTGCTTCGAAAAGACCTGCGCCAACACCTGCGCAGAGTGCAAACGCCCCATCGGCGTCGACGCCAA GGAGCTGCACCACAAGAACCGCTACTGGCATGAGAGCTGCTTCCGCTGCGCTAAGTGCTACAAGGGCCTGGCCTCGGAGCCCTTCAACGCCCGCGAGGGACGCAAGATCATGTGCGGCAAATGCGGCGCCATACAGGACGGCAA CCGTTGCCAGGGCTGCTACAAGGGGGTCCTGCCAGGGACTCAGAATGGGG ]
[+] EMBL FR0062935 [ CAGGTCCCAGGAGCTACCTCACCTCCACCATGAGGCGAACGC TTCGACTGCTACTACTGCCGCGACAACCTGCAGGGCAAGAAATATGTGAAGAAGGACGAGAAGCCCATATGCCCCAAGTGCTTCGAAAAGACCTGCGCCAACACCTGCGCAGAGTGCAAACGCCCCATCGGCGTCGACGCCAA GGAGCTGCACCACAAGAACCGCTACTGGCATGAGAGCTGCTTCCGCTGCGCTAAGTGCTACAAGGGCCTGGCCTCGGAGCCCTTCAACGCCCGCGACGACGGGAAGATCATGTGCGGCAAATGCGGCGCCATACAGGAACGCAA CC ]
[+] EMBL FR0062916 [ AGGTCCCAGGAGCTACCTCACCTCCACCATGA GCGAACGC TTCGACTGCTACTACTGCCGCGACAACCTGCAGGGCAAGAAATATGTGAAGAAGGACGAGAAGCCCATATGCCCCAAGTGCTTCGAAAAGACCTGCGCCAACACCTGCGCAGAGTGCAAACGCCCCATCGGCGTCGACGCCAA GGAGCTGCACCACAAGAACCGCTACTGGCATGAGAGCTGCTTCCGCTGCGCTAAGTGCTACAAGGGCCTGCCCTCGGAGCCCTTCAACGCCCGCGACGACGGCAAGATCATGTGCGGCAAATGCGGCG CATACAGGACGGCAA CCGT ]
[+] EMBL FR0062938 [ GGTCCCAGGAGCTACCTCACCTCCACCATGG GCGAACGC TTCGACTGCTACTACTGCCGCGACAACCTGCAGGGCAAGAAATATGTGAAGAAGGACGAGAAGCCCATATGCCCCAAGTGCTTCGAAAAGACCTGCGCCAACACCTGCGCAGAGTGCAAACGCCCCATCGGCGTCGACGCCAA GGAGCTGCACCACAAGAACCGCTACTGGCATGAGAGCTGCTTCCGCTGCGCTAAGTGCTACAAGGGCCTGGCCTCGGAGCCCTTCAACGCCCGCG ]
[+] EMBL FR0062964 [ TCCCAGGAGCTACCTCACCTCCACCATGG CCGAACGC TTCGACTGCTACTACTGCCGCGACAACCTGCAGGGCAAGAAATATGTGAAGAAGGACGAGAAGCCCATATGCCCCAAGTGCTTCGAAAAGACCTGCGCCAACACCTGCGCAGAGTGCAAACGCCCCATCGGCGTCGACGCCAA GGAGCTGCACCACAAGAACCGCTACTGGCATGAGAGCTGCTTCCGCTGCGCTAAGTGCTACAAGGGCCTGGCCTTGGAGCCCTTCAACGCCCGCGACGACGGCAAGATCATGTGCGGCAAAGGCGGGGCCATACAGGACGGCAACCCGTTG ]
[+] EMBL FR0062561 [ CCAGGAGCTACCTCACCTCCACCATGA CCGAACGC TTCGAGTGCTACTACTGCCGCGACAACCTGCA GCCAAGAAATATGTGAAGAAGGACGAGAAGCCCATATGCCCCAAGTGCTTCGAAAAGACCTGCGCCAACACCTGCGCAGAGTGCAAACGCCCCATCGGCGTCGACGCCAA GGAGCTGCACCACAAGAACCGCTACTGGCATGAGAGCTGCTTCCGCTGCGCTAAGTGCTACAAGGGCCTGGCCTCGGAGCCCTTCAACGCCCGCGACGACGGCAAGATCATGTGCGGCAAATGCGG GCCATACAGGACGGCAA CCGTTGCCA GGCTTGTACAA GGGGTCCTGCCA GGACTCAGAATGg ]
[+] EMBL FR0062193 [ CAGGAGCTACCTCACCTCCACCATGA CCGAAGGC TTCGACTGCTACTACTGCCGCGACAACCTGCAGGGCAAGAAATATGTGAAGAAGGACGAGAAGCCCATATGCCCCAAGTGCTTCGAAAAGACCTGCGCCAACACCTGCGCAGAGTGCAAACGCCCCATCGGCGTCGACGCCAA GGAGCTGCACCACAAGAACCGCTACTGGCATGAGAGCTGCTTCCGCTGCGCTAAGTGCTACAAGGGCCTGGCCTCGGAGCCCTTCAACGCCCGCGACGACGGCAAGATCATGGGCGGCAAATGCGGCGCCATACAGGACGGCAA CCGTTGCCAGGGCTGCTAC ]
[+] EMBL FR0062752 [ AGGAGCTACCTCAGCTCCACCATGAGGCGAACTC TTCGACTGCTACTACTGCCGCGACAACCTGCANNTCAAGAAATATGTGAAGAAGGACTAGAAGCCCATATGCCCCAAGTGCTTCGAAAAGACCTGCGCCAACACCTGCGCAGAGTGCAAACGCCCCATCGGCGTCGA GCAGA GCAGCTGCACCACAAGAACCGCTACTGGCATGAGAGCTGCTGTCGCTGCGCTAAGTGCTACAAGGAACTGGCCTCGGAGCCCTTCAACGCg ]
[+] EMBL FR0062972 [ AGGAGCTACCTCACCTCCACCATGG CCGAACGC TTCGACTGCTACTACTGCCGCGACAACCTGCAGGGCAAGAAATATGTGAAGAAGGACGAGAAGCCCATATGCCCCAAGTGCTTCGAAAAGACCTGCGCCAACACCTGCGCAGAGTGCAAACGCCCCATCGGCGTCGACGCCAA GGAGCTGCACCACAAGAACCGCTACTGGCATGAGAGCTGCTTCCGCTGCGCTAAGTGCTACAAGGCCCTTGCCTCGGAGCCCTTCAACGCCCGCGACGACGGCAAGATCATGTGCGGAAAATGCGGCGCCATACAGGACCGC ]
[+] EMBL FR0062272 [ AGCTACCTCACCTCCACCATGA CCGAACGC TTCGACCGCTACTACTGCCGCGACAACCTGCAGGGCAAGAAATATGTGAAGAAGGACGAGAAGCGCATATGCCCCAAGTGCTTCGAAAAGACCTGCGCCAACACCTGCGCAGAGTGCAAACGCCCCATCGGCGTCGACGCCAA GGAGCTGCACCACAAGAACCGCTACTGGCATGAGAGCTGCTTCCGCTGCGCTAAGTGCTACAAGGGCCTGGCCTCGGAGCCCTTCAACGCCCGCGACGACGGCAAGATCATGTGCGGCAAATGCGGCGCCATACAGGACGCCAA CCGTTGCCAGGGCTGCTACAAGGGGGGCCTGCCAGGGACTC ]
[+] EMBL FR0062869 [ gtatGCTACCTCACCTCCACCATGA CCGAACGC TTCGACTGCTACTACTGCCGCGACAACCTGCAGGGCAAGAAATATGTGAAGAAGGACGATAAGCCCATATGCCCCAAGCGCTTCGAAAAGACCTGCGCCAACACCTGCGCAGAGTGCAAACGCCCCATCGGCGTCGACGCCAA GGAGCTGCACCACAAGAACCGCTACTGGCATGAGAGCTGCTTCCGCTGCGCTAAGTGCTACAAGGGCCTGGCCTCGGAGCCCTTCAACGCCCGCGACGA ]
[+] EMBL FR0062205 [ CTACCTCACCTCCACCATGA CCGAACGCGTGGGACTGCTACTACTGCCGCGACAACCTCCATTGTAAGAAATATGTGAAGAAGGACGAGAAGCCCATATGCCCCAAGTGCTTCGAAAAGACCTGCGCCAACACCTGCGCAGAGTGCAAACGCCCCATCGGGGTCGACGCCAA GGAGCTGCACCACAAGAACCGCTACTGGCATGAGATCTGCTTCCGCTGCGCTAAGTGCTACAAGGGCCTGGCCTCGGAGCCCTTCAACGCCCGCGAC ]
[+] EMBL FR0062981 [ TACCTCACCTCCACCATGAGGCGAACGC TTCGACTGCTACTACTGCCGCGACAACCTGCAGGGCAAGAAATATGTGAAGAAGGACGAGAAGCCCATATGCCCCAAGTGCTTCGAAAAGACCTGCGCCAACACCTGCGCAGAGTGCAAACGCCCCATCGGCGTCGACGCCAAGGGAGCTGCACCACAAGAACCGCTACTGGCATGAGAGCTGCTTCCGCTGCGCTAAGTGCTACAAGGGCCTGGCCTCGGAGCCCTTCAACGCCCGCGACGACGGTAAGATCATGTGCGGCAAATGCGGGGCCATACAGGACGGCAA CCGTTGGCCAGGCTGCTACAAGGG ]
[+] EMBL FR0062292 [ CTCACCTCCACCATGA CCGAACGC TTCGACTGCTACTACTGCCGCGACAACCTGCAGGGCAAGAAATATGTGAAGAAGGACGAGAAGCCCATATGCCCCAAGTGCTTCGAAAAGACCTGCGCCAACACCTGCGCAGAGTGCAAACGCCCCATCGGCGTCGACGCCAA GGAGCTGCACCACAAGAACCGCTACTGGCATGAGAGCTGCTTCCGCTGCGCTAAGTGCTACAAGGGCCTGGCCTCGGAGCCCTTCAACGCCCGCGACGACGGCAAGATCATGTGCGGGAAATGCGGCGCCATACAGGACGGCAA CCGTT ]
[+] EMBL FR0062982 [ CACCATGA CCGAACGC TGGGGCTGCTACTACTGGCG GACAACCTG AGGCAAGAAATATGTGAAGAAGGACGAGAAGCCCATATGCCCCAAGCGCTTCGAAAAGACCTGCGCCAACACCTGCGCAGAGTGCAAACGCCCCATCGGCGTCGACGCCAA GGAGCTGCACCACAAGAACCGCTACTGGCATGAGAGCTGCTTCCGCTGCGCTAAGTGCTACAAGGGCCTGTCCTCGGAGCCCTT ]
consensusID : consensus_2882#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 16 consensus length = 620 fasta sequence
[CCGCTGGACGCGCTGGTGGTGTCAGCTGACAGAAGTTCATCCGTGCGCTTTGGAGAGCAGGTCCCAGGAGCTACCTCACCTCCACCATGACCGAACGCTTCGACTGCTACTACTGCCGCGACAACCTGCAGGGCAAGAAATATGTGAAGAAGGACGAGAAGCCCATATGCCCCAAGTGCTTCGAAAAGACCTGCGCCAACACCTGCGCAGAGTGCAAACGCCCCATCGGCGTCGACG-CCAAGGAGCTGCACCACAAGAACCGCTACTGGCATGAGAGCTGCTTCCGCTGCGCTAAGTGCTACAAGGGCCTGGCCTCGGA-GCCCTTCAACGCCCGCGACGACGGCAAGATCATGTGCGGCAAATGCGGCGCCATACAGGACGGCAACCGTTGCCAGGGCTGCTACAAGGTGGTCCTGCCAGGGACTCAGAATGTGGAGTACAAGAACAAGGTGTGGCACGAGGACTGCTTCAAGTGCTTCGAATGCAAGCAGCCGATCCGCACCAAGAGCTTCCTGACCAAGGGCGACGACATCTACTGCACTTCCTGCCATGACACCAAATTTGCCAAGAAGTGCTTCCACTGCAAGAAGCCGATCAGCTCCCGGGGGCTCAGCTACCGG]
[+] EMBL BU806747 [CCGCTGGACGCGCTGGTGGTGTCAGCTGACAGAAGTTCATCCGTGCGCTTTGGAGAGCAGGTCCCAGGAGCTACCTCACCTCCACCATGACCGAACGCTTCGACTGCTACTACTGCCGCGACAACCTGCAGGGCAAGAAATATGTGAAGAAGGACGAGAAGCCCATATGCCCCAAGTGCTTCGAAAAGACCTGCGCCAACACCTGCGCAGAGTGCAAACGCCCCATCGGCGTCGACG CCAAGGAGCTGCACCACAAGAACCGCTACTGGCATGAGAGCTGCTTCCGCTGCGCTAAGTGCTACAAGGGCCTGGCCTCGGA GCCCTTCAACGCCCGCGACGACGGCAAGATCATGTGCGGCAAATGCGGCGCCATACAGGACGGCAACCGTTGCCAGGGCTGCTACAAGGTGGTCCTGCCAGGGACTCAGAATGTGGAGTACAAGAACAAGGTGTGGCACGAGG ]
[+] EMBL FR0063102 [ GCTGACAGAAGTTCATCCGTGCGCTTTGGAG AGGTCCCAGGAGCTGCCTCACCTCCACCATGACCGAACGCTTCGACTGCTACTACTGCCGCGACAACCTGCAGGGCAAGAAATATGTGAAGAAGGACGAGAAGCCCATATGCCCCAAGTGCTTCGAAAAGACCTGCGCCAACACCTGCGCAGAGTGCAAACGCCCCATCGGCGTCGACG CCAAGGAGCTGCACCACAAGAACCGCTACTGGCATGAGAGCTGCTTCCGCTGCGCTAAGTGCTACAAGGGCCTGGCCTCGGA GCCCTTCAACGCCCGCGACGACGGCAAGATCATGTGCGGCAAATGCGGCGCCATACAGGACGGCAACCGTTGCCAGGGCTGCTACAAGGTGGTCCTGCCAGGGACTCAGAATGTGGAGTACAAGAACAAGGT ]
[+] EMBL FR0062868 [ GTTCATCCGTGCGCTTTGGAGAGCAGGTCCCAGGAGCTACCTCACCTCCACCATGACCGAACGCTTCGACTGCTACTACTGCCGCGACAACCTGCAGGGCAAGAAATATGTGAAGAAGGACGAGAAGCCCATATGCCCCAAGTGCTTCGAAAAGACCTGCGCCAACACCTGCGCAGAGTGCAAACGCCCCATCGGCGTCGACG CCAAGGAGCTGCACCACAAGAACCGCTACTGGCATGAGAGCTGCTTCCGCTGCGCTAAGTGCTACAAGGGCCTGGCCTCGGA GCCCTTCAACGCCCGCGACGACGGCAAGATCATGTGCGGCAAATGCGGCGCCATACAGGACGGCAACCGTTG ]
[+] EMBL FR0063069 [ TCATCCGTGCGCTTTGGAG AGGTCCCAGGAGCTACCTCACCTCCAGCATGACCGAACGCTTCGACTGCTACTACTGCCGCGACAACCTGCAGGGCAAGAAATATGTGAAGAAGGACGAGAAGCCCATATGCCCCAAGTGCTTCGAAAAGACCTGCGCCAACACCTGCGCAGAGTGCAAACGCCCCATCGGCGTCGACG CCAAGGAGCTGCACCACAAGAACCGCTACTGGCATGAGAGCTGCTTCCGCTGCGCTAAGTGCTACAAGGGCCTGGCCTCGGA GCCCTTCAACGCCCGCGACGACGGCAAGATCATGTGCGGCAAATGCGGCGCCATACAGGACGGCAACCGTTGCCAGGGCTGCTACAAGGTGGGCCTGCCAGGGACTCAGAATGTGGAGTACAAGAACAAGGTGTGGCACGAGGACTGCTTCAAGTGCTTCGAATGCAAGCAGCC ]
[+] EMBL FR0062728 [ CATCCGTGCGCTTTGGAG AGGTCCCAGGAGCTACCTCACCTCCACCATTACCCAACGCTTCGACTGCTACTACTGCCGCGACAACCTGCAGGGCAAGAAATATGTGAAGAAGGACGAGAAGCCCATATGCCCCAAGTGCTTCGAAAAGACCTGCGCCAACACCTGCGCAGAGTGCAAACGCCCTATCGGCGTCGACGCCCAAGGAGCTGCACCACAGGAA ]
[+] EMBL FR0063039 [ GTGCGCTTTGGAG AGGTCCCAGGAGCTACCTCACCTCCACCATGACCGAACGCTTCGACTGCTACTACTGCCGCGACAACCTGCAGGGCAAGAAATATGTGAAGAAGGACGAGAAGCCCATATGCCCCAAGTGCTTCGAAAAGACCTGCGCCAACACCTGCGCAGAGTGCAAACGCCCCATCGGCGTCGACG CCAAGGAGCTGCACCACAAGAACCGCTACTGGCATGAGAGCTGCTTCCGCTGCGCTAAGTGCTACAAGGGCCTGGCCTCGGA GCCCTTCAACGCCCGCGACGACGGCAAGATCATGTGCGGCAAATGCGGCGCCATACAGGACGGCAACCGTTGCCAGGGCTGCTACAAGGTGGTCCTGCCAGGGACTCAGAATGTGGAGTACAAGAA ]
[+] EMBL FR0062705 [ TGCGCTTTGGAG AGGTCCCAGGAGCTACCTCACCTCCACCATGACCGAACGCTTCGACTGCTACTACTGCCGCGACAACCTGCAGGGCAAGAAATATGTGAAGAAGGACGAGAAGCCCATATGCCCCAAGTGCTTCGAAAAGACCTGCGCCAACACCTGCGCAGAGTGCAAACGCCCCATCGGCGTCGACG CCAAGGAGCTGCACCACAAGAACCGCTACTGGCATGAGAGCTGCTTCCGCTGCGCTAAGTGCTACAAGGGCCTGGCCTTAAAGGCCCTTCAACGCCCGCGACGACGGCAAGATCATGTGCGGCAAATG ]
[+] EMBL FR0062246 [ TGCGCTTTGGAGAGCATGTCCCAGGAGCTACCTCACCTCCACGATGACCGAACGCTTCGACTGCTACTACTGCCGCGACAACCTGCAGGGCAAGAAATATGTGAAGAAGGACGAGAAGCCCATATGCCCCAAGTGCTTCGAAAAGACCTGCGCCAACACCTGCGCAGAGTGCAAACGCCCCATCGGCGTCGACG CCAAGGAGCTGCACCACAAGAACCGCTACTGGCATGAGAGCTGCTTCCGCTGCGCTAAGGGCTACAAGGGCCTGGCCTCGGA GCCCTTCAACGCCCGCGACGACGGCAAGATCATGTGCGGCAAATGCGNCCCCATACAGGACGGCAACCGTTGCCAGGGCTGCTACAAGGTGAACCTGCCca ]
[+] EMBL FR0062492 [ CGCTTTGGAGAGCAGGTCCCAGGAGCTACCTCACCTCCACGAGGACCGAACGCTTCGACTGCTACTACTGCCGCGACAACCTGCAGGGCAAGAAATATGTGAAGAAGGACGAGAAGCCCATATGCCCCAAGTGCTTCGAAAAGACCTGCGCCAACACCTGCGCAGAGCGCAAACGCCCCATCGGCGTCGACG CCAAGGAGCTGCACCACAAGAA ]
[+] EMBL FR0063025 [ TTGGAG AGGTCCCAGGAGCTACCTCACCTCCACGATGACCGAACGCTTCGACTGCTACTACTGCCGCGACAACCTGCAGGGCAAGAAATATGTGAAGAAGGACGAGAAGCCCATATGCCCCAAGTGCTTCGAAAAGACCTGCGCCAACACCTGCGCAGAGTGCAAACGCCCCATCGGCGTCGACG CCAAGGAGCTGCACCACAAGAACCGCTACTGGCATGAGAGCTGCTTCCGCTGCGCTAAGTGCTACAAGGGCCTGGCCTCGGA GCCCTTCAACGCCCGCGACGACGGCAAGATCATGTGCGGCAAATGCGGCGCCATACAGGACGGCAACCGGTGCCAGGGCTGCTACAAGGTGGTCCTGCCAGGGACTCAGAATGTGGAGTACAAGAACAAG ]
[+] EMBL FR0062219 [ TTGGAGAGCTTTTCCCAGGAGCTACCTCACCTCCACGGGGACCGAACGCTTCGACTGCTACTACTGCCGCGACAACCTGCAGGGCAAGAAATATGTGAAGAAGGACGAGAAGCCCATATGCCCCAAGTGCTTCGAAAAGACCTGCGCCAACACCTGCGCAGAGTGCAAACGCCCCATCGGCGTCGACG CCAAGGAGCTGCACCACAAGAACCGCTACTGGCATGAGAGCTGCTTCCGCTGCGCTAAGTGCTACAAGGGCCTGGCCTCGGA GCCCTTCAACGCCCGCGACGACGGCAAGATCATGTGCGGCAAATGCGGCGCCATACAGGAACGCAACCGTTGCCAGGGCTGCTACAAGGTG ]
[+] EMBL FR0062645 [ GAGAGCAGGTCCCAGGAGCTACCTCACCTCCACCATGACCGAACGCTTCGACTGCTACTACTGCCGCGACAACCTGCAGGGCAAGAAATATGTGAAGAAGGACGAGAAGCCCATATGCCCCAAGTGCTTCGAAAAGACCTGCGCCAACACCTGCGCAGAGTGCAAACGCCCCATCGGCGTCGACG CCAAGGAGCTGCACCACAAGAACCGCTACTGGCATGAGAGCTGCTTCCGCTGCGCTAAGTGCTACAAGGGCCTGGGCTCGGA GCCCTTCAACGCCCGCGACGACGGCAAGATCATGTGCGGCAAATGCGGCGCCATACAGGACGGCAACCGGTGCCAGGGCTGGTACAAGGTGGGCCTGCCAGGGACTCAGAATGGG ]
[+] EMBL CA589199 [ AGGAGCTACCTCACCTCCACCATGACCGAACGCTTCGACTGCTACTACTGCCGCGACAACCTGCAGGGCAAGAAATATGTGAAGAAGGACGAGAAGCCCATATGCCCCAAGTGCTTCGAAAAGACCTGCGCCAACACCTGCGCAGAGTGCAAACGCCCCATCGGCGTCGACG CCAAGGATCTGCACCACAAGAACCGCTACTGGCATGAGAGCTGCTTCCGCTGCGCTAAGTGCTACAAGGGCCTGGCCTCGGA GCCCTTCAACGCCCGCGACGACGGCAAGATCATGTGCGGCAAATGCGGCGCCATACAGGACGGCAACCGTTGCCAGGGCTGCTACAAGGTGGTCCTGCCAGGGACTCAGAATGTGGAGTACAAGAACAAGGTGTGGCACGAGGACTGCTTCAAGTGCTTCGAATGCAAGCAGCCGATCCGCACCAAGAGCTTCCTGACCAAGGGCGACGACATCTACTGCACTTCCTGCCATGACACCAAATTTGCCAAGAAGTGCTTCCACTGCAAGAAGCCGATCAGCTCCCGGGGGCTCAGCTACCGG]
[+] EMBL FR0062756 [ AGGAGCTACCTCACCTCCACCATGACCGAACGCTTCGACTGCTACTACTGCCGCGACAACCTGCAGGGCAAGAAATATGTGAAGAAGGACGAGAAGCCCATATACCCCAAGTGCTTCGAAAAGACCTGCGCCAACACCTGCGCAGAGTGCAAACGCCCCATCGGCGTCGACG CCAAGGAGCTGCACCACAAGAACCGCTACTGGCATAAGAGCTGCTTCCGCTGCGCTAAGTGCTACAAGGGCCTGGCCTCGGA GCCCTTCAACGCCCGCGACGACGGCAAGATCATGTGCGGCAAATGCGGCGCCATACAGGACGGCAACCGTTGCCAGGGCTGCTACAAGGTGG ]
[+] EMBL FR0062265 [ TACCTCACCTCCACCATGACCGAACGCTTCGACCGCTACTACTGCCGCGACAACCTGCAGTGCAAGAAATATGTGAAGAAGGACGAGAAGCGCATATGCCCCAAGTGCTTCGAAAAGACCTGCGCCAACACCTGCGCAGAGTGCAAACGCCCCATCGGCGTCGACG CCAAGGAGCTGCACCACAAGAACCGCTACTGGCATGAGAGCTGCTTCCGCTGCGCTAAGTGCTACAAGGGCCTGGCCTCGGA GCCCTTCAACGCCCGCGACGACGGCAAGATCATGTGCGGCATATGCGGCGCCATACAGGACGGCAACCGTTGCCAGGGCTGCTACAAGGTGGTCCT ]
[+] EMBL FR0063060 [ GACCGAACGCTTCGACTGCTACTACTGCCGCGACAACCTGCAGGGCAAGAAATATGTGAAGAAGGACGAGAAGCCCATATGCCCCAAGTGCTTCGAAAAGACCTGCGCCAACACCTGCGCAGAGTGCAAACGCCCCATCGGCGTCGACG CCAAGGAGCTGCACCACAAGAACCGCTACTGGCATGAGAGCTGCTTCCGCTGCGCTAAGTGCTACAAGGGCCTGGCCTCGGA GCCCTTCAACGCCCGCGACGACGGCAAGATCATGTGCGGCAAATGCGGCGCCATACAGGACGGCAACCGTTGCCAGGGCTGCTACAAGGTGGTCCTGCCAGGGACTCAGAATGTGGAGTACAAGAACAAGGGGTGGCACGAGGACTGCTTCAAGT ]
consensusID : consensus_2882#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 397 fasta sequence
[CATGGACGACTCCGAGCCGCCTTTCACGGACACCCACCGCCACCTGCAGATGTGAGGACGACGCAGACCCTGACAGCCGTCCGCCCGCCACCCACCCGAGCCGTCGAGCAAACGACCAGTACCTGACAAAACTGTCCCAGGAGCTACCTCACCTCCACCATGGGCGAACGCTTCGACTGCTACTACTGCCGCGACAACCTGCA-GGCAAGAAATATGTGAAGAAGGACGAGAAGCCCATATGCCCCAAGTGCTTCGAAAAGACCTGCGCCAACACCTGCGCAGAGTGCAAACGCCCCATCGGCGTCGACGCCAAGGAGCTGCACCACAAGAACCGCTACTGGCATGAGAGCTGCTTCCGCTGCGCTAAGTGCTACAAGGGCCTGGCCTCGGAGCCCTT]
[+] EMBL FR0063036 [CATGGACGACTCCGAGCCGCCTTTCACGGACACCCACCGCCACCTGCAGATGTGAGGACGACGCAGACCCTGACAGCCGTCCGCCCGCCACCCACCCGAGCCGTCGAGCAAACGACCAGTACCTGACAAAACTGTCCCAGGAGCTACCTCACCTCCACCATGACCGAACGCTTCGACTGCTACTACTGCCGCGACAACCTGCAGGGCAAGAAATATGTGAAGAAGGACGAGAAGCCCATATGCCCCAAGTGCTTCGAAAAGACCTGCGCCAACACCTGCGCAGAGTGCAAACGCCCCATCGGCGTCGACGCCAAGGAGCTGCACCACAAGAACCGCTACTGGCATGAGAGCTGCTTCCGCTGCGCTAAGTGCTACAAGGGCCTGGCCTCGGAGCCCTT]
[+] EMBL FR0062949 [ CAGGAGCTACCTCACCTCCACCATGGGCGAGCGCTTCGACTGCTACTACTGCCGCGACAACCTGCA GGCAAGAAATATGTGAAGAAGGACGAGAAGCCCATATGCCCCAAGTGCTTCGAAAAGACCTGCGCCAACACCTGCGCAGAGTGCAAACGCCCCATCGGCGTCGAC ]
[+] EMBL FR0062533 [ GGAGCTACCTCACCTCCACCATGGGCGAACGCTTCGACTGCTACTACTGCCGC ACAACCTGCA GTCAAGAAATATGTGAAGAAGGACGAGAAGCCCATga ]
consensusID : consensus_2882#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 367 fasta sequence
[AATAAAGCTGCGCTTTAAGGATTCTGCTGCACTGCTTATATGCTGTTATTCCATCGAGGATCGGCTCCTTATAGATATATATTTAATTAATCTAGAGGAGGACTGCTGCTGACAGGTCCCAGGAGCTACCTCACCTCCACCATGACCGAACGCTTCGACTGCTACTACTGCCGCGACAACCTGCAGGGCAAGAAATATGTGAAGAAGGACGAGAAGCCCATATGCCCCAAGTGCTTCGAAAAGACCTGCGCCAACACCTGCGCAGAGTGCAAACGCCCCATCGGCGTTGACGCCAAGGAGCTGCACCACAAGAACCGCTACTGGCATGAGAGCTGCTTTCGCTGCCCTAAGTGCTACAAGGGCCTGG]
[+] EMBL FR0062217 [AATAAAGCTGCGCTTTAAGGATTCTGCTGCACTGCTTATATGCTGTTATTCCATCGAGGATCGGCTCCTTATAGATATATATTTAATTAATCTAGAGGAGGACTGCTGCTGACAGGTCCCAGGAGCTACCTCACCTCCACCATGACCGAACGCTTCGACTGCTACTACTGCCGCGACAACCTGCAGGGCAAGAAATATGTGAAGAAGGACGAGAAGCCCATATGCCCCAAGTGCTTCGAAAAGACCTGCGCCAACACCTGCGCAGAGTGCAAACGCCCCATCGGCGTTGACGCCAAGGAGCTGCACCACAAGAACCGCTACTGGCATGAGAGCTGCTTTCGCTGCCCTAAGTGCTACAAGGGCCTGG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_2882#0 ----------------------------------------------------TTCTGCCT 8
consensus_2882#1 ---------------------------------------------------CCGCTGGAC 9
consensus_2882#3 ---------AATAAAGCTGCGCTTTAAGGATTCTGCTGCACTGCTTATATGCTGTTATTC 51
consensus_2882#2 CATGGACGACTCCGAGCCGCCTTTCACGGACACCCACCGCCACCTGCAGATGTGAGGACG 60
consensus_2882#0 CTGCTGCCCCC-----CCTCCCGACTGCTG--CAACCATGGCCTACAGACACACA----- 56
consensus_2882#1 GCGCTGGTGGTG----TCAGCTGACAGAAGTTCATCCGTGCGCTTTGGAGA--------- 56
consensus_2882#3 CATCGAGGATCG----GCTCCTTATAGATATATATTTAATTAATCTAGAGGAGGACTGCT 107
consensus_2882#2 ACGCAGACCCTGACAGCCGTCCGCCCGCCACCCACCCGAGCCGTCGAGCAAACGACCAGT 120
* * * * * * *
consensus_2882#0 -----GCAG----GTCCCAGGAGCTACCTCACCTCCACCATGACCGAACGCTTCGACTGC 107
consensus_2882#1 -----GCAG----GTCCCAGGAGCTACCTCACCTCCACCATGACCGAACGCTTCGACTGC 107
consensus_2882#3 GC-TGACAG----GTCCCAGGAGCTACCTCACCTCCACCATGACCGAACGCTTCGACTGC 162
consensus_2882#2 ACCTGACAAAACTGTCCCAGGAGCTACCTCACCTCCACCATGGGCGAACGCTTCGACTGC 180
** ***************************** ****************
consensus_2882#0 TACTACTGCCGCGACAACCTGCAGGGCAAGAAATATGTGAAGAAGGACGAGAAGCCCATA 167
consensus_2882#1 TACTACTGCCGCGACAACCTGCAGGGCAAGAAATATGTGAAGAAGGACGAGAAGCCCATA 167
consensus_2882#3 TACTACTGCCGCGACAACCTGCAGGGCAAGAAATATGTGAAGAAGGACGAGAAGCCCATA 222
consensus_2882#2 TACTACTGCCGCGACAACCTGCAGG-CAAGAAATATGTGAAGAAGGACGAGAAGCCCATA 239
************************* **********************************
consensus_2882#0 TGCCCCAAGTGCTTCGAAAAGACCTGCGCCAACACCTGCGCAGAGTGCAAACGCCCCATC 227
consensus_2882#1 TGCCCCAAGTGCTTCGAAAAGACCTGCGCCAACACCTGCGCAGAGTGCAAACGCCCCATC 227
consensus_2882#3 TGCCCCAAGTGCTTCGAAAAGACCTGCGCCAACACCTGCGCAGAGTGCAAACGCCCCATC 282
consensus_2882#2 TGCCCCAAGTGCTTCGAAAAGACCTGCGCCAACACCTGCGCAGAGTGCAAACGCCCCATC 299
************************************************************
consensus_2882#0 GGCGTCGACGCCAAGGAGCTGCACCACAAGAACCGCTACTGGCATGAGAGCTGCTTCCGC 287
consensus_2882#1 GGCGTCGACGCCAAGGAGCTGCACCACAAGAACCGCTACTGGCATGAGAGCTGCTTCCGC 287
consensus_2882#3 GGCGTTGACGCCAAGGAGCTGCACCACAAGAACCGCTACTGGCATGAGAGCTGCTTTCGC 342
consensus_2882#2 GGCGTCGACGCCAAGGAGCTGCACCACAAGAACCGCTACTGGCATGAGAGCTGCTTCCGC 359
***** ************************************************** ***
consensus_2882#0 TGCGCTAAGTGCTACAAGGGCCTGGCCTCGGAGCCCTTCAACGCCCGCGACGACGGCAAG 347
consensus_2882#1 TGCGCTAAGTGCTACAAGGGCCTGGCCTCGGAGCCCTTCAACGCCCGCGACGACGGCAAG 347
consensus_2882#3 TGCCCTAAGTGCTACAAGGGCCTGG----------------------------------- 367
consensus_2882#2 TGCGCTAAGTGCTACAAGGGCCTGGCCTCGGAGCCCTT---------------------- 397
*** *********************
consensus_2882#0 ATCATGTGCGGCAAATGCGGCGCCATACAGGACGGCAACCGTTGCCAGGGCTGCTACAAG 407
consensus_2882#1 ATCATGTGCGGCAAATGCGGCGCCATACAGGACGGCAACCGTTGCCAGGGCTGCTACAAG 407
consensus_2882#3 ------------------------------------------------------------
consensus_2882#2 ------------------------------------------------------------
consensus_2882#0 GGGGTCCTGCCAGGGACTCAGAATGTGGAGTACAAGAACAAGGTGTGGCACGAGGACTGC 467
consensus_2882#1 GTGGTCCTGCCAGGGACTCAGAATGTGGAGTACAAGAACAAGGTGTGGCACGAGGACTGC 467
consensus_2882#3 ------------------------------------------------------------
consensus_2882#2 ------------------------------------------------------------
consensus_2882#0 TTCAAGTGCTTCGAATGCAAGCAGCCGATCCGCACCAAGAGCTTCCTGACCAAGGGCGAC 527
consensus_2882#1 TTCAAGTGCTTCGAATGCAAGCAGCCGATCCGCACCAAGAGCTTCCTGACCAAGGGCGAC 527
consensus_2882#3 ------------------------------------------------------------
consensus_2882#2 ------------------------------------------------------------
consensus_2882#0 GACATCTACTGCACTTCCTGCCATGACACCAAATTTGCCAAGAAGTGCTTCCACTGCAAG 587
consensus_2882#1 GACATCTACTGCACTTCCTGCCATGACACCAAATTTGCCAAGAAGTGCTTCCACTGCAAG 587
consensus_2882#3 ------------------------------------------------------------
consensus_2882#2 ------------------------------------------------------------
consensus_2882#0 AAGCCGATCAGCTCCGGGGGGCTCAGCTACCAG 620
consensus_2882#1 AAGCCGATCAGCTCCCGGGGGCTCAGCTACCGG 620
consensus_2882#3 ---------------------------------
consensus_2882#2 ---------------------------------
|
|||||||
| Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |