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These datas are free for academic use only, please contact me for any other use.

Takifugu rubripes
cluster # 374 cluster # 374       Sequences # 2       consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_374#0 length = 385 sequences # 1  
 consensus_374#1 length = 229 sequences # 1  
consensusID : consensus_374#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 385
fasta sequence 
                              [GAACAATCTCCATTCCAGCAAGATAACAGGTCTCTCGAAGTGCTTTGATTCTCTCATCGGATTCTATAACTTACTGACTCAAACATCGTTTCTTTCACCGAGGCTCACCCTCGAATACAAGACGAGCAACACTGAGGCGGACAAACGCATTGAAGGTTTTCCATTTGACATCAACATGTTCTGTCTGACAAACAACAAGAGCCTCTGAGGATCGGAGGAGGATTATCATTCCAACATTTCCTCCTCCTGTAATCGATGACGGGACCGAACTCACCTGGTCGGGCCGGGACCTCCCCGGCCAAGCTGAGCCGGTACGGCCGCTCCAAGAGCACCAGTGCTCACTGTCTCCTGCGCTGCAGCACCCAGGAGGAGCTGTGTGCATCCG]

[+] EMBL FR0060320            [GAACAATCTCCATTCCAGCAAGATAACAGGTCTCTCGAAGTGCTTTGATTCTCTCATCGGATTCTATAACTTACTGACTCAAACATCGTTTCTTTCACCGAGGCTCACCCTCGAATACAAGACGAGCAACACTGAGGCGGACAAACGCATTGAAGGTTTTCCATTTGACATCAACATGTTCTGTCTGACAAACAACAAGAGCCTCTGAGGATCGGAGGAGGATTATCATTCCAACATTTCCTCCTCCTGTAATCGATGACGGGACCGAACTCACCTGGTCGGGCCGGGACCTCCCCGGCCAAGCTGAGCCGGTACGGCCGCTCCAAGAGCACCAGTGCTCACTGTCTCCTGCGCTGCAGCACCCAGGAGGAGCTGTGTGCATCCG]




>consensus_374#0
GAACAATCTCCATTCCAGCAAGATAACAGGTCTCTCGAAGTGCTTTGATTCTCTCATCGG
ATTCTATAACTTACTGACTCAAACATCGTTTCTTTCACCGAGGCTCACCCTCGAATACAA
GACGAGCAACACTGAGGCGGACAAACGCATTGAAGGTTTTCCATTTGACATCAACATGTT
CTGTCTGACAAACAACAAGAGCCTCTGAGGATCGGAGGAGGATTATCATTCCAACATTTC
CTCCTCCTGTAATCGATGACGGGACCGAACTCACCTGGTCGGGCCGGGACCTCCCCGGCC
AAGCTGAGCCGGTACGGCCGCTCCAAGAGCACCAGTGCTCACTGTCTCCTGCGCTGCAGC
ACCCAGGAGGAGCTGTGTGCATCCG

consensusID : consensus_374#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 229
fasta sequence 
                              [GTAGCTGACACCGAAGAGCTGCGCGCAATGCTGATGGGAAAGAATGCGCAGAGTAGGGTTTCCATTTGACATCAACATGTTCTGCCTGACAAACAACAAGAGCCTGTGAGGATCGGAGGAGGATTATCGGTCCAACATTTCCTCCTCCTGTAATCGATGACGAGACCGAACTCACCTGGGCGGGCCGGGACCTTCCCGGTCAAGCTGAGCCGGGACGCGCGCTCCAAGA]

[+] EMBL FR0060887            [GTAGCTGACACCGAAGAGCTGCGCGCAATGCTGATGGGAAAGAATGCGCAGAGTAGGGTTTCCATTTGACATCAACATGTTCTGCCTGACAAACAACAAGAGCCTGTGAGGATCGGAGGAGGATTATCGGTCCAACATTTCCTCCTCCTGTAATCGATGACGAGACCGAACTCACCTGGGCGGGCCGGGACCTTCCCGGTCAAGCTGAGCCGGGACGCGCGCTCCAAGA]




>consensus_374#1
GTAGCTGACACCGAAGAGCTGCGCGCAATGCTGATGGGAAAGAATGCGCAGAGTAGGGTT
TCCATTTGACATCAACATGTTCTGCCTGACAAACAACAAGAGCCTGTGAGGATCGGAGGA
GGATTATCGGTCCAACATTTCCTCCTCCTGTAATCGATGACGAGACCGAACTCACCTGGG
CGGGCCGGGACCTTCCCGGTCAAGCTGAGCCGGGACGCGCGCTCCAAGA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_374#0      GAACAATCTCCATTCCAGCAAGATAACAGGTCTCTCGAAGTGCTTTGATTCTCTCATCGG 60
consensus_374#1      ------------------------------------------------------------
                                                                                 

consensus_374#0      ATTCTATAACTTACTGACTCAAACATCGTTTCTTTCACCGAGGCTCACCCTCGAATACAA 120
consensus_374#1      ---------------------------------------GTAGCTGACACCGAAGAGCTG 21
                                                            *  *** ** *   *   *  

consensus_374#0      GACGAGCAACACTGAGGCGGACAAACGCATTGA--AGGTTTTCCATTTGACATCAACATG 178
consensus_374#1      --CGCGCAATGCTGATGGGAAAGAATGCGCAGAGTAGGGTTTCCATTTGACATCAACATG 79
                       ** ****  **** * * *  ** **   **  *** *********************

consensus_374#0      TTCTGTCTGACAAACAACAAGAGCCTCTGAGGATCGGAGGAGGATTATCATTCCAACATT 238
consensus_374#1      TTCTGCCTGACAAACAACAAGAGCCTGTGAGGATCGGAGGAGGATTATCGGTCCAACATT 139
                     ***** ******************** **********************  *********

consensus_374#0      TCCTCCTCCTGTAATCGATGACGGGACCGAACTCACCTGGTCGGGCCGGGACCTCCCCGG 298
consensus_374#1      TCCTCCTCCTGTAATCGATGACGAGACCGAACTCACCTGGGCGGGCCGGGACCTTCCCGG 199
                     *********************** **************** ************* *****

consensus_374#0      CCAAGCTGAGCCGGTACGGCCGCTCCAAGAGCACCAGTGCTCACTGTCTCCTGCGCTGCA 358
consensus_374#1      TCAAGCTGAGCCGGGACGCGCGCTCCAAGA------------------------------ 229
                      ************* ***  **********                              

consensus_374#0      GCACCCAGGAGGAGCTGTGTGCATCCG 385
consensus_374#1      ---------------------------


Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner    (hubert.wassner@noos.fr)