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These datas are free for academic use only, please contact me for any other use.

Takifugu rubripes
cluster # 961 cluster # 961       Sequences # 2       consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_961#0 length = 394 sequences # 1  
 consensus_961#1 length = 193 sequences # 1  
consensusID : consensus_961#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 394
fasta sequence 
                              [TTCATAGCAGGGATCTGCTTTGATCTGCTAACGATAATCGACGAGAACGAACAGGATAATGACAATTGTACGGAGGATAAACTGGAACCTCGACAGTGCTTGAAGGGACAGGGACCACAAAAATGCCTGTTACGCACCCCATTTGCTGAGAGATCACCATGGAAACCCCAAGTCAGAAACGCGGTGCTGCCACCCCTTTGTCCCCTGCTCGCATTACGAGGCTGCAGGAGAAGGAGGACCTCTGCAACCTCAATGACAGGCTGGCCGTCTATATCGACAAAGTGCGCTCACTGGAGATTGAGAACGCCAGCCTGCGTCTGCGCATCACGGAGTCAGAGTCCACGGTATGTCGGGACTTGTCAGGAATAAAAGCGACCTATGAGGCAGAGCTCGC]

[+] EMBL FR0057672            [TTCATAGCAGGGATCTGCTTTGATCTGCTAACGATAATCGACGAGAACGAACAGGATAATGACAATTGTACGGAGGATAAACTGGAACCTCGACAGTGCTTGAAGGGACAGGGACCACAAAAATGCCTGTTACGCACCCCATTTGCTGAGAGATCACCATGGAAACCCCAAGTCAGAAACGCGGTGCTGCCACCCCTTTGTCCCCTGCTCGCATTACGAGGCTGCAGGAGAAGGAGGACCTCTGCAACCTCAATGACAGGCTGGCCGTCTATATCGACAAAGTGCGCTCACTGGAGATTGAGAACGCCAGCCTGCGTCTGCGCATCACGGAGTCAGAGTCCACGGTATGTCGGGACTTGTCAGGAATAAAAGCGACCTATGAGGCAGAGCTCGC]




>consensus_961#0
TTCATAGCAGGGATCTGCTTTGATCTGCTAACGATAATCGACGAGAACGAACAGGATAAT
GACAATTGTACGGAGGATAAACTGGAACCTCGACAGTGCTTGAAGGGACAGGGACCACAA
AAATGCCTGTTACGCACCCCATTTGCTGAGAGATCACCATGGAAACCCCAAGTCAGAAAC
GCGGTGCTGCCACCCCTTTGTCCCCTGCTCGCATTACGAGGCTGCAGGAGAAGGAGGACC
TCTGCAACCTCAATGACAGGCTGGCCGTCTATATCGACAAAGTGCGCTCACTGGAGATTG
AGAACGCCAGCCTGCGTCTGCGCATCACGGAGTCAGAGTCCACGGTATGTCGGGACTTGT
CAGGAATAAAAGCGACCTATGAGGCAGAGCTCGC

consensusID : consensus_961#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 193
fasta sequence 
                              [CGATAATCGACGAGAACGAGCAGGATAATGACAATTGTACGGAGGATAAACTGGAACCTCGACAGTGCTTGAAGGGACAGGGACCACAAAAATGCTGGTGCATGTGTAGTAAGCAACAAGTTGGAGAGCAGTTCAGGCATATTTTTCAAAGGTGCACACGCCCAACAGCAGACTGCCTTTTTCGCTGGATCCT]

[+] EMBL FR0058123            [CGATAATCGACGAGAACGAGCAGGATAATGACAATTGTACGGAGGATAAACTGGAACCTCGACAGTGCTTGAAGGGACAGGGACCACAAAAATGCTGGTGCATGTGTAGTAAGCAACAAGTTGGAGAGCAGTTCAGGCATATTTTTCAAAGGTGCACACGCCCAACAGCAGACTGCCTTTTTCGCTGGATCCT]




>consensus_961#1
CGATAATCGACGAGAACGAGCAGGATAATGACAATTGTACGGAGGATAAACTGGAACCTC
GACAGTGCTTGAAGGGACAGGGACCACAAAAATGCTGGTGCATGTGTAGTAAGCAACAAG
TTGGAGAGCAGTTCAGGCATATTTTTCAAAGGTGCACACGCCCAACAGCAGACTGCCTTT
TTCGCTGGATCCT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_961#0      TTCATAGCAGGGATCTGCTTTGATCTGCTAACGATAATCGACGAGAACGAACAGGATAAT 60
consensus_961#1      -------------------------------CGATAATCGACGAGAACGAGCAGGATAAT 29
                                                    ******************* *********

consensus_961#0      GACAATTGTACGGAGGATAAACTGGAACCTCGACAGTGCTTGAAGGGACAGGGACCACAA 120
consensus_961#1      GACAATTGTACGGAGGATAAACTGGAACCTCGACAGTGCTTGAAGGGACAGGGACCACAA 89
                     ************************************************************

consensus_961#0      AAATGCCTGT-TACGCACCCCATTTGCTGAGA-GATCACCATGGAAACCCCAAGTCAGAA 178
consensus_961#1      AAATGCTGGTGCATGTGTAGTAAGCAACAAGTTGGAGAGCAGTTCAGGCATATTTTTCAA 149
                     ******  **  * *      *       **  *   * **    *  *  *  *   **

consensus_961#0      ACGCGGTGCTGCCACCCCTTTGTCCCCTGCTCGCATTACGAGGCTGCAGGAGAAGGAGGA 238
consensus_961#1      A---GGTGCACACGCCCAACAGCAGACTGCCTTTTTCGCTGGATCCT------------- 193
                     *   *****   * ***    *    ****     *  *  *                  

consensus_961#0      CCTCTGCAACCTCAATGACAGGCTGGCCGTCTATATCGACAAAGTGCGCTCACTGGAGAT 298
consensus_961#1      ------------------------------------------------------------
                                                                                 

consensus_961#0      TGAGAACGCCAGCCTGCGTCTGCGCATCACGGAGTCAGAGTCCACGGTATGTCGGGACTT 358
consensus_961#1      ------------------------------------------------------------
                                                                                 

consensus_961#0      GTCAGGAATAAAAGCGACCTATGAGGCAGAGCTCGC 394
consensus_961#1      ------------------------------------


Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner    (hubert.wassner@noos.fr)