These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1297#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 664 fasta sequence [CCGCTTTACCGGTCGGAATCATGCGTGTGCTTACCGATGCAACTTGCATTAGAGTGCTTTGTGGCGAGAAATTACTCATAGGCATAGGGAACCAGTTGCTGCTCGTGTACCGCTCATCAAATGGATCGACGCTACGAAGGATCGCTCCATTGCCAAGGCTAGTGGATAAAATTCATGGAATAGAGGCGTGTGTTATGAAGGAAGAACAATGGCTCGTGATAGTTCACGCTGGTCGTGCAACGTACAGTATCATATTAGATTGCCAATCCCACACGTTCTCTGAATGTGCTCTGCTCGTTATTCCGGAAGAAATAGACCTCCAGCCGGTACCTTTCATTCGACGACGGTTAAACGACTGGATTAGCCGGATCTCACTGCTCTCTTCTACCGAGCTGTGCATTGTTACCGCGCATGGAGTGGCAGCGTTATTGAAACGAGGCGATAACAATCGTTGTTTGCAATGGGATGTTGTAGATAAAAGTCCGTGCGAGGACGGGTCTACGCTCTACTGTTCCACGATTAGCGGCCAACAGTGGGAGAACGTTATAATACTTTCTGGCACTGCCTTAGGTCTTTTGCTGATCTGGTCCGTTGATGGTCCAAACCGGGGCAAAGTGTTAACGAGTGTCTCTGCCCATAACGGGGTCATTTTCTCGATATCGTG] [+] EMBL BM647619 [CCGCTTTACCGGTCGGAATCATGCGTGTGCTTACCGATGCAACTTGCATTAGAGTGCTTTGTGGCGAGAAATTACTCATAGGCATAGGGAACCAGTTGCTGCTCGTGTACCGCTCATCAAATGGATCGACGCTACGAAGGATCGCTCCATTGCCAAGGCTAGTGGATAAAATTCATGGAATAGAGGCGTGTGTTATGAAGGAAGAACAATGGCTCGTGATAGTTCACGCTGGTCGTGCAACGTACAGTATCATATTAGATTGCCAATCCCACACGTTCTCTGAATGTGCTCTGCTCGTTATTCCGGAAGAAATAGACCTCCAGCCGGTACCTTTCATTCGACGACGGTTAAACGACTGGATTAGCCGGATCTCACTGCTCTCTTCTACCGAGCTGTGCATTGTTACCGCGCATGGAGTGGCAGCGTTATTGAAACGAGGCGATAACAATCGTTGTTTGCAATGGGATGTTGTAGATAAAAGTCCGTGCGAGGACGGGTCTACGCTCTACTGTTCCACGATTAGCGGCCAACAGTGGGAGAACGTTATAATACTTTCTGGCACTGCCTTAGGTCTTTTGCTGATCTGGTCCGTTGATGGTCCAAACCGGGGCAAAGTGTTAACGAGTGTCTCTGCCCATAACGGGGTCATTTTCTCGATATCGTG] consensusID : consensus_1297#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 342 fasta sequence [AACGAATCGGCACGAGGTGTTAACTTTCTTGGCACTGCCTTAGGCTCTTTTGCTGATCTGGTCCGTTGATGGTCCAAACCGGGGCAAAGTGTTAACGAGTGTCTCTGCCCATAACGGGGTCATTTTCTCGATATCGTGCAATTTTGATATAGGCTTGCTCACAACTACCTCGGATGATCGATCGGTTAAATTTTGGAACGTTAAACTGTCAGGAAATAAGCATAGCTGCTCGCGGGCGATAGAACTGCGGGAGGAAAGATATTGTTTCGCCCACACAGCTAGGGTGTTTCAATGTCGTATCTTAAATGGAGAACACCGAACTCTGGTTGCATCGATCGGGGA] [+] EMBL BX469370 [AACGAATCGGCACGAGGTGTTAACTTTCTTGGCACTGCCTTAGGCTCTTTTGCTGATCTGGTCCGTTGATGGTCCAAACCGGGGCAAAGTGTTAACGAGTGTCTCTGCCCATAACGGGGTCATTTTCTCGATATCGTGCAATTTTGATATAGGCTTGCTCACAACTACCTCGGATGATCGATCGGTTAAATTTTGGAACGTTAAACTGTCAGGAAATAAGCATAGCTGCTCGCGGGCGATAGAACTGCGGGAGGAAAGATATTGTTTCGCCCACACAGCTAGGGTGTTTCAATGTCGTATCTTAAATGGAGAACACCGAACTCTGGTTGCATCGATCGGGGA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_1297#0 CCGCTTTACCGGTCGGAATCATGCGTGTGCTTACCGATGCAACTTGCATTAGAGTGCTTT 60 consensus_1297#1 ------------------------------------------------------------ consensus_1297#0 GTGGCGAGAAATTACTCATAGGCATAGGGAACCAGTTGCTGCTCGTGTACCGCTCATCAA 120 consensus_1297#1 ------------------------------------AACGAATCG-GCACGAGGTGTTAA 23 * *** * ** * ** consensus_1297#0 ATGGATCGACGCTACGAAGGATCGCTCCATTGCCAAGGCTAGTGGATAAAATTCATGGAA 180 consensus_1297#1 CTTTCTTGGCACTGCCTTAGGCTCTTTTGCTGATCTGGTCCGTTGATG--GTCCA--AAC 79 * * * * ** * * * ** ** ** *** * ** * consensus_1297#0 TAGAGGCGTGTGTTATGAAGGAAGAACAATGGCTCGTGATAGTTCACGCTGGTCGTGCAA 240 consensus_1297#1 CGGGGCAAAGTGTTA----ACGAGTGTCTCTGCCCATAACGGGGTCATTTTCTCG-ATAT 134 * * ****** ** ** * * * * * *** * consensus_1297#0 CGTACAGTATC-ATATTAGATTGCCAATCCCACACGTTCTCTGAATGTGCTCTGCTCGTT 299 consensus_1297#1 CGTGCAATTTTGATATAGGCTTGCT-----CACAACTACCTCGGATGATCGATCGGTTAA 189 *** ** * * **** * **** **** * * * *** * * consensus_1297#0 ATTCCGGAAGAAATAGACCTCCAGCCGGTACCTTT---CATTCGACGACGGTTAAACGAC 356 consensus_1297#1 ATTTTGGAACGT-TAAACTGTCAGGAAATAAGCATAGCTGCTCGCGGGCGATAGAACTGC 248 *** **** ** ** *** ** * *** * ** * *** * consensus_1297#0 TGGATTAGCCGGATCTCACTGCTCTCTTCTACCGAGCTGTGCATTGTTACCGCGCATGGA 416 consensus_1297#1 GGGA--GGAAAGATATTGTTTCGCCCACACAGCTAGG-GTGTTTCAATGTCGTATCTTAA 305 *** * *** * * * * * * * ** *** * * ** * * consensus_1297#0 GTGGCAGCGTTATTGAAACGAGGCGATAACAATCGTTGTTTGCAATGGGATGTTGTAGAT 476 consensus_1297#1 ATGGAGA--ACACCGAACTCTGGTTGCATCGATCGGGGA--------------------- 342 *** * *** ** * * **** * consensus_1297#0 AAAAGTCCGTGCGAGGACGGGTCTACGCTCTACTGTTCCACGATTAGCGGCCAACAGTGG 536 consensus_1297#1 ------------------------------------------------------------ consensus_1297#0 GAGAACGTTATAATACTTTCTGGCACTGCCTTAGGTCTTTTGCTGATCTGGTCCGTTGAT 596 consensus_1297#1 ------------------------------------------------------------ consensus_1297#0 GGTCCAAACCGGGGCAAAGTGTTAACGAGTGTCTCTGCCCATAACGGGGTCATTTTCTCG 656 consensus_1297#1 ------------------------------------------------------------ consensus_1297#0 ATATCGTG 664 consensus_1297#1 -------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||