These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1300#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 472 fasta sequence [CCGGAACGAGCTGTTCCAGTATCTGGCACACGTGTACGCAAACTCACACACTACGATGCACCTGGGACGGCCGTGCCCGAGTTTTCTGCGGGAAAACTTCCCCGACGGCATCACGAACGGGGCCGCCTGGTACAGCGTGACGGGCGGCATGCAGGACTGGTCGTACGTGGTTGGCGGTGCGTACGAGCTCACGCTCGAGGTCGGCTGCGACAAGTTCCCTCCCGCCGCGCAGCTGCCCGAGTTTTGGAAGCAAAACCGCGAGGCTTTGCTGCAGTACGTGGAGCAGGCGCAGCACGGCATCACCGGGTACGTGCGCAGCACGATCGGCCATCCGATTGCGCGGGCCAGCGTGCAGGTGAACCAGATCGAGCATGTGACCTACACGACGGCGAACGGCGATTTCTACCGGCTGCTACTGCCCGGCCTGTACAACGTTACGGCCGAGGCGGAGGGCTACGAACCGCAGACGCTG] [+] EMBL BM657547 [CCGGAACGAGCTGTTCCAGTATCTGGCACACGTGTACGCAAACTCACACACTACGATGCACCTGGGACGGCCGTGCCCGAGTTTTCTGCGGGAAAACTTCCCCGACGGCATCACGAACGGGGCCGCCTGGTACAGCGTGACGGGCGGCATGCAGGACTGGTCGTACGTGGTTGGCGGTGCGTACGAGCTCACGCTCGAGGTCGGCTGCGACAAGTTCCCTCCCGCCGCGCAGCTGCCCGAGTTTTGGAAGCAAAACCGCGAGGCTTTGCTGCAGTACGTGGAGCAGGCGCAGCACGGCATCACCGGGTACGTGCGCAGCACGATCGGCCATCCGATTGCGCGGGCCAGCGTGCAGGTGAACCAGATCGAGCATGTGACCTACACGACGGCGAACGGCGATTTCTACCGGCTGCTACTGCCCGGCCTGTACAACGTTACGGCCGAGGCGGAGGGCTACGAACCGCAGACGCTG] consensusID : consensus_1300#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 163 fasta sequence [CCGCCCACGCGTCCGCCCACGCGTCCGGTATCTGGCACACGTGTACGCAAACTCACACACTACGATGCACCTGGGACGGCCGTGCCCGAGTTTTCTGCGGGAAAACTTCCCCGACGGCATCACGAACGGGGCCGCCTGGTACAGCGTGACGGGCGGCATGCAG] [+] EMBL BM611596 [CCGCCCACGCGTCCGCCCACGCGTCCGGTATCTGGCACACGTGTACGCAAACTCACACACTACGATGCACCTGGGACGGCCGTGCCCGAGTTTTCTGCGGGAAAACTTCCCCGACGGCATCACGAACGGGGCCGCCTGGTACAGCGTGACGGGCGGCATGCAG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_1300#0 ---------CCGGAACGAGCTGTTCCAGTATCTGGCACACGTGTACGCAAACTCACACAC 51 consensus_1300#1 CCGCCCACGCGTCCGCCCACGCGTCCGGTATCTGGCACACGTGTACGCAAACTCACACAC 60 * * * *** ********************************* consensus_1300#0 TACGATGCACCTGGGACGGCCGTGCCCGAGTTTTCTGCGGGAAAACTTCCCCGACGGCAT 111 consensus_1300#1 TACGATGCACCTGGGACGGCCGTGCCCGAGTTTTCTGCGGGAAAACTTCCCCGACGGCAT 120 ************************************************************ consensus_1300#0 CACGAACGGGGCCGCCTGGTACAGCGTGACGGGCGGCATGCAGGACTGGTCGTACGTGGT 171 consensus_1300#1 CACGAACGGGGCCGCCTGGTACAGCGTGACGGGCGGCATGCAG----------------- 163 ******************************************* consensus_1300#0 TGGCGGTGCGTACGAGCTCACGCTCGAGGTCGGCTGCGACAAGTTCCCTCCCGCCGCGCA 231 consensus_1300#1 ------------------------------------------------------------ consensus_1300#0 GCTGCCCGAGTTTTGGAAGCAAAACCGCGAGGCTTTGCTGCAGTACGTGGAGCAGGCGCA 291 consensus_1300#1 ------------------------------------------------------------ consensus_1300#0 GCACGGCATCACCGGGTACGTGCGCAGCACGATCGGCCATCCGATTGCGCGGGCCAGCGT 351 consensus_1300#1 ------------------------------------------------------------ consensus_1300#0 GCAGGTGAACCAGATCGAGCATGTGACCTACACGACGGCGAACGGCGATTTCTACCGGCT 411 consensus_1300#1 ------------------------------------------------------------ consensus_1300#0 GCTACTGCCCGGCCTGTACAACGTTACGGCCGAGGCGGAGGGCTACGAACCGCAGACGCT 471 consensus_1300#1 ------------------------------------------------------------ consensus_1300#0 G 472 consensus_1300#1 - |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||