These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1410#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 753 fasta sequence [CCACGAATCGGCCGAGGATTGAAAAAAAAACACGTAAAAAAAATCCGAAGCAGCCGAGAGGGAACCAGGTTCCGTCGCAAAAACCACAGCAGAGTAATCTGACCCAACGAACGAACATATTAACCAGACATCGGAGGTCACGAAACACGGACGATAGTAGGGAAAACAGTTAACCAGCAACCGGCCAGCAACGGCGCACGAACGGTGGTGGAGGGTGGTGTTGGCGTTTGTGCCATTCCCGCAGAACTTGCCGGCTTTCGTTCCGGTTCCAGGGCGCCGTCGACATCAGCCCGTCGCCCGTCGGCGGGTACCGGTCCGTTGGGCTNGGCCTGGGTTGGGCTGGGTATAGGCGTTTCGGACCAGGATCGTAACAACTTTTTGGCCCGAATCCGGACCGAAGGCCAAGCGGTTGGGAGCCTTAAACGGGGTGCCAAGCTTGACGGGCCGTTGACAGGGCCGGCAACCGTTTCCAACTTGTGCANAAAAAACGCCAATTCCCGGGTTCAGTANCTGGCTCGGTTTGGCGCCGGGGATAACAGGTTGTAACGGAAGTTAAGGTTAGGACGTATGTACACGTGGGGCGAATGGGATGCACTTTGATGCGCGGCATGCAACAATGAGGCACAAAGCGGGGTGGATTGAACAAAAGGAAGAACCCGAAAAGGGGGGGTGATAGGCGGANACANATTATTGTAGCAATACAAGCTGAAACCAGAGAGACACAAAGGGTTCCCAAGTTGTCTACGTACTGGG] [+] EMBL BX468841 [CCACGAATCGGCCGAGGATTGAAAAAAAAACACGTAAAAAAAATCCGAAGCAGCCGAGAGGGAACCAGGTTCCGTCGCAAAAACCACAGCAGAGTAATCTGACCCAACGAACGAACATATTAACCAGACATCGGAGGTCACGAAACACGGACGATAGTAGGGAAAACAGTTAACCAGCAACCGGCCAGCAACGGCGCACGAACGGTGGTGGAGGGTGGTGTTGGCGTTTGTGCCATTCCCGCAGAACTTGCCGGCTTTCGTTCCGGTTCCAGGGCGCCGTCGACATCAGCCCGTCGCCCGTCGGCGGGTACCGGTCCGTTGGGCTNGGCCTGGGTTGGGCTGGGTATAGGCGTTTCGGACCAGGATCGTAACAACTTTTTGGCCCGAATCCGGACCGAAGGCCAAGCGGTTGGGAGCCTTAAACGGGGTGCCAAGCTTGACGGGCCGTTGACAGGGCCGGCAACCGTTTCCAACTTGTGCANAAAAAACGCCAATTCCCGGGTTCAGTANCTGGCTCGGTTTGGCGCCGGGGATAACAGGTTGTAACGGAAGTTAAGGTTAGGACGTATGTACACGTGGGGCGAATGGGATGCACTTTGATGCGCGGCATGCAACAATGAGGCACAAAGCGGGGTGGATTGAACAAAAGGAAGAACCCGAAAAGGGGGGGTGATAGGCGGANACANATTATTGTAGCAATACAAGCTGAAACCAGAGAGACACAAAGGGTTCCCAAGTTGTCTACGTACTGGG] consensusID : consensus_1410#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 413 fasta sequence [CGGTTGAACGGAAGTGGTAACAAACTCACCATTCCCGTTCGGCAAAAAGGCCCTTGTGCTTACCTAATTGTGTGTTTCGATGAGTAGTAGGGAACAGTATGAAAAGGGAAAAGAAGAAACCGATTGAAAAAAGAAAACGTAAAAAATCCGAAGCAGCCGAGAGGGAACCTGGTTCCGTCGCCAAAACCACAGCAGAGTAATCTGACCCAACGAACGAACATATTAACAGACATCGGAGGTCACGAACACGGACGATAGTAGGGAAAACAGTAACAGCAACCGCCAGCAACGGCGCACGAACGGTGGTGGAGGTGGTGTTGGCGTTGTGCCATCCCGCAGAACTGCCGCTTCGTCCGTTCCAGGCGCCGTCGACATCAGCCCGTCGCCCGTCGGCGGTACCGTCGTGGCTGCGG] [-] EMBL BM633241 [CGGTTGAACGGAAGTGGTAACAAACTCACCATTCCCGTTCGGCAAAAAGGCCCTTGTGCTTACCTAATTGTGTGTTTCGATGAGTAGTAGGGAACAGTATGAAAAGGGAAAAGAAGAAACCGATTGAAAAAAGAAAACGTAAAAAATCCGAAGCAGCCGAGAGGGAACCTGGTTCCGTCGCCAAAACCACAGCAGAGTAATCTGACCCAACGAACGAACATATTAACAGACATCGGAGGTCACGAACACGGACGATAGTAGGGAAAACAGTAACAGCAACCGCCAGCAACGGCGCACGAACGGTGGTGGAGGTGGTGTTGGCGTTGTGCCATCCCGCAGAACTGCCGCTTCGTCCGTTCCAGGCGCCGTCGACATCAGCCCGTCGCCCGTCGGCGGTACCGTCGTGGCTGCGG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_1410#0 ------------------------------------------------------------ consensus_1410#1 CGGTTGAACGGAAGTGGTAACAAACTCACCATTCCCGTTCGGCAAAAAGGCCCTTGTGCT 60 consensus_1410#0 ---------------------------------------------CCACGAATCGGCCGA 15 consensus_1410#1 TACCTAATTGTGTGTTTCGATGAGTAGTAGGGAACAGTATGAAAAGGGAAAAGAAGAAAC 120 ** * consensus_1410#0 GGATTGAAAAAAAAACACGTAAAAAAAATCCGAAGCAGCCGAGAGGGAACCAGGTTCCGT 75 consensus_1410#1 CGATTGAAAAAAGAAAACGTAAAAAA--TCCGAAGCAGCCGAGAGGGAACCTGGTTCCGT 178 *********** ** ********** *********************** ******** consensus_1410#0 CGCAAAAACCACAGCAGAGTAATCTGACCCAACGAACGAACATATTAACCAGACATCGGA 135 consensus_1410#1 CGCCAAAACCACAGCAGAGTAATCTGACCCAACGAACGAACATATTAAC-AGACATCGGA 237 *** ********************************************* ********** consensus_1410#0 GGTCACGAAACACGGACGATAGTAGGGAAAACAGTTAACCAGCAACCGGCCAGCAACGGC 195 consensus_1410#1 GGTCACGAA-CACGGACGATAGTAGGGAAAACAGT--AACAGCAACCG-CCAGCAACGGC 293 ********* ************************* * ********* *********** consensus_1410#0 GCACGAACGGTGGTGGAGGGTGGTGTTGGCGTTTGTGCCATTCCCGCAGAACTTGCCGGC 255 consensus_1410#1 GCACGAACGGTGGTGGAGG-TGGTGTTGGCGTT-GTGCCAT-CCCGCAGAACT-GCCG-- 347 ******************* ************* ******* *********** **** consensus_1410#0 TTTCGTTCCGGTTCCAGGGCGCCGTCGACATCAGCCCGTCGCCCGTCGGCGGGTACCGGT 315 consensus_1410#1 CTTCGTCC--GTTCCAGG-CGCCGTCGACATCAGCCCGTCGCCCGTCGGCGG-TACCG-- 401 ***** * ******** ********************************* ***** consensus_1410#0 CCGTTGGGCTNGGCCTGGGTTGGGCTGGGTATAGGCGTTTCGGACCAGGATCGTAACAAC 375 consensus_1410#1 TCGT--GGCTGCGG---------------------------------------------- 413 *** **** * consensus_1410#0 TTTTTGGCCCGAATCCGGACCGAAGGCCAAGCGGTTGGGAGCCTTAAACGGGGTGCCAAG 435 consensus_1410#1 ------------------------------------------------------------ consensus_1410#0 CTTGACGGGCCGTTGACAGGGCCGGCAACCGTTTCCAACTTGTGCANAAAAAACGCCAAT 495 consensus_1410#1 ------------------------------------------------------------ consensus_1410#0 TCCCGGGTTCAGTANCTGGCTCGGTTTGGCGCCGGGGATAACAGGTTGTAACGGAAGTTA 555 consensus_1410#1 ------------------------------------------------------------ consensus_1410#0 AGGTTAGGACGTATGTACACGTGGGGCGAATGGGATGCACTTTGATGCGCGGCATGCAAC 615 consensus_1410#1 ------------------------------------------------------------ consensus_1410#0 AATGAGGCACAAAGCGGGGTGGATTGAACAAAAGGAAGAACCCGAAAAGGGGGGGTGATA 675 consensus_1410#1 ------------------------------------------------------------ consensus_1410#0 GGCGGANACANATTATTGTAGCAATACAAGCTGAAACCAGAGAGACACAAAGGGTTCCCA 735 consensus_1410#1 ------------------------------------------------------------ consensus_1410#0 AGTTGTCTACGTACTGGG 753 consensus_1410#1 ------------------ |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||