These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_142#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 538 fasta sequence [CGACCCACGCGTCCGGTCGCGTACAACGTCGGCAAGTTCCCGTTCGCGGCCAACTCGCGCGCCAAGACGAACAACGACACGGACGGCTTCGTGAAGGTGCTGGCCGACAAGCAGACGGATCGCGTGCTTGGCGTGCATATCATTGGACCGGCCGCTGGTGAGCTGATCAACGAGTCTGTCCTTGCCATGGAGTACGGTGCGTCCGCCGAGGACGTTGCCCGCGTCTGCCACGCTCACCCGACCTGCGCCGAAGCCCTGCGAGAGGCACACACAGCGGCCAGTTTCGGCAAGCCGATCAACTTCTAATTTGTAAAAAAAAAGAAACCACACACCCGCAACACAACCCCACTACCAGTTCAGCACCACCAGCAACACATCCATTTTTATGGTGAAGTAAAGCGAGCAAATAAGTGTGCAAACCTTACAGACGAACCGCCTTTTCCCTATCCCTCCCTTATGCGGGATGTCTCCTGAAACAACTCCTCGCCTTTCATTTTTCGGCACACCATCATCATGCGGGTGGGCGAGATAGGCGGAA] [+] EMBL BM631482 [CGACCCACGCGTCCGGTCGCGTACAACGTCGGCAAGTTCCCGTTCGCGGCCAACTCGCGCGCCAAGACGAACAACGACACGGACGGCTTCGTGAAGGTGCTGGCCGACAAGCAGACGGATCGCGTGCTTGGCGTGCATATCATTGGACCGGCCGCTGGTGAGCTGATCAACGAGTCTGTCCTTGCCATGGAGTACGGTGCGTCCGCCGAGGACGTTGCCCGCGTCTGCCACGCTCACCCGACCTGCGCCGAAGCCCTGCGAGAGGCACACACAGCGGCCAGTTTCGGCAAGCCGATCAACTTCTAATTTGTAAAAAAAAAGAAACCACACACCCGCAACACAACCCCACTACCAGTTCAGCACCACCAGCAACACATCCATTTTTATGGTGAAGTAAAGCGAGCAAATAAGTGTGCAAACCTTACAGACGAACCGCCTTTTCCCTATCCCTCCCTTATGCGGGATGTCTCCTGAAACAACTCCTCGCCTTTCATTTTTCGGCACACCATCATCATGCGGGTGGGCGAGATAGGCGGAA] consensusID : consensus_142#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 136 fasta sequence [GACACAGCGGTCCGCCGGGGAAATCCCGGACATCTCGAAAGCGAAACAGTCGCGCGGGGAGAAGAAGGCCCGCAAGATCAGGTCCAAGCTCGGGCGGAAGCCGGGCCAGGGCGTCAACCGGGTAACGATCCGGAAG] [+] EMBL BX610405 [GACACAGCGGTCCGCCGGGGAAATCCCGGACATCTCGAAAGCGAAACAGTCGCGCGGGGAGAAGAAGGCCCGCAAGATCAGGTCCAAGCTCGGGCGGAAGCCGGGCCAGGGCGTCAACCGGGTAACGATCCGGAAG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_142#0 CGACCCACGCGTCCGGTCGCGTACAACGTCGGCAAGTTCCCGTTCGCGGCCAACTCGCGC 60 consensus_142#1 -GACACA-GCGGTCCGCCGGGGAAATCCCGGACA---TCTCGAAAGCGAAACAGTCGCGC 55 *** ** *** * * ** * * * * * ** ** ** *** * ****** consensus_142#0 GCCAAGACGAACAACGACACGGACGGCTTCGTGAAGGTGCTGGCCGACAAGCAGACGGAT 120 consensus_142#1 GGGGAGAAGAAGGCCCGCAAGATCAGGTCC----AAGCTCGGGCGGAAGCCGGGCCAGGG 111 * *** *** * ** * * * * * * * * *** ** * * * consensus_142#0 CGCGTGCTTGGCGTGCATATCATTGGACCGGCCGCTGGTGAGCTGATCAACGAGTCTGTC 180 consensus_142#1 CGTCAACCGGGTAACGATCCGGAAG----------------------------------- 136 ** * ** ** * consensus_142#0 CTTGCCATGGAGTACGGTGCGTCCGCCGAGGACGTTGCCCGCGTCTGCCACGCTCACCCG 240 consensus_142#1 ------------------------------------------------------------ consensus_142#0 ACCTGCGCCGAAGCCCTGCGAGAGGCACACACAGCGGCCAGTTTCGGCAAGCCGATCAAC 300 consensus_142#1 ------------------------------------------------------------ consensus_142#0 TTCTAATTTGTAAAAAAAAAGAAACCACACACCCGCAACACAACCCCACTACCAGTTCAG 360 consensus_142#1 ------------------------------------------------------------ consensus_142#0 CACCACCAGCAACACATCCATTTTTATGGTGAAGTAAAGCGAGCAAATAAGTGTGCAAAC 420 consensus_142#1 ------------------------------------------------------------ consensus_142#0 CTTACAGACGAACCGCCTTTTCCCTATCCCTCCCTTATGCGGGATGTCTCCTGAAACAAC 480 consensus_142#1 ------------------------------------------------------------ consensus_142#0 TCCTCGCCTTTCATTTTTCGGCACACCATCATCATGCGGGTGGGCGAGATAGGCGGAA 538 consensus_142#1 ---------------------------------------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||