These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_160#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 235 fasta sequence [NCAGCAGAATCGCCACGAGGTTTATGTCCATCAAGGGTGCTATAGAGTCAAGTTCCCATTACATTAAGTTCATTTCACGTAAGAAGGGGTCAATAACTGTACTGTGGAAAATGGGGATGTACCACGGGTTGCGTGTACGGGCTGAACGCTCTCCGGCAACGCGGTTCCGTTGTAACATATCTTTCCGTACCAAAATGTGCCGGCAGCGGTAGACTATTTCATCATATATACCCAT] [+] EMBL BX469429 [NCAGCAGAATCGCCACGAGGTTTATGTCCATCAAGGGTGCTATAGAGTCAAGTTCCCATTACATTAAGTTCATTTCACGTAAGAAGGGGTCAATAACTGTACTGTGGAAAATGGGGATGTACCACGGGTTGCGTGTACGGGCTGAACGCTCTCCGGCAACGCGGTTCCGTTGTAACATATCTTTCCGTACCAAAATGTGCCGGCAGCGGTAGACTATTTCATCATATATACCCAT] consensusID : consensus_160#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 223 fasta sequence [CTGGTTTTTTTTTTTTTAAGTTTTCGGGGGATTGATCAAAAAAAGATTTTTGTTAAAATATTTTAATTTTAGCATAAATTAAATTAAATAGATTTACATAGAAATTGTTTTAATTGTTTGGATGGGGTGGGGTGTGGAGCTTTTAAATTTGGCGAAAGGATGTTTGCTTTTTTTTTTTTTTTTTGTGCGCTTATGCTTATTTTTTTATTTGTTTGTTTTTTAT] [+] EMBL CNS09G9Y [CTGGTTTTTTTTTTTTTAAGTTTTCGGGGGATTGATCAAAAAAAGATTTTTGTTAAAATATTTTAATTTTAGCATAAATTAAATTAAATAGATTTACATAGAAATTGTTTTAATTGTTTGGATGGGGTGGGGTGTGGAGCTTTTAAATTTGGCGAAAGGATGTTTGCTTTTTTTTTTTTTTTTTGTGCGCTTATGCTTATTTTTTTATTTGTTTGTTTTTTAT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_160#0 NCAGCAGAATCGCCACGAGGTTTATGTCCATCAAGGGTGCTATAGAGTCAAGTTCCCATT 60 consensus_160#1 ----CTGGTTTTTTTTT--TTTTAAGTTTTCGGGGGATTGATCAAAAAAAGATTTTTGTT 54 * * * **** ** ** * * * * ** ** consensus_160#0 ACATTAAGTTCATTTCA-CGTAAGAAGGGGTCAATAACTGTACTGTGGAAAATGGGGATG 119 consensus_160#1 AAAATATTTTAATTTTAGCATAAATTAAATTAAATAGATTTAC-ATAGAAATTGTTTTAA 113 * * ** ** **** * * *** * **** * *** * **** ** consensus_160#0 TACCACGGGTTGCGTGTACGGGCTGAACGCTC---TCCGGCAACGCGGTTCCGTTGTAAC 176 consensus_160#1 TTGTTTGGATGGGGTG-GGGTGTGGAGCTTTTAAATTTGGCGAAAGGATGTTTGCTTTTT 172 * ** * * *** * * ** * * * *** * * * * consensus_160#0 ATATCTTTCCGTACCAAAATGTGCCGGCAGCGGTAGACTATTTCATCATATATACCCAT 235 consensus_160#1 TTTTTTTTTTTTGTGCGCTTATGCT--TATTTTTTTATTTGTTTGTTTTTTAT------ 223 * * *** * * *** * * * * ** * * *** |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||