These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1795#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 413 fasta sequence [CCGAGGTTACTGCCGCAAGGGACGATTACGATCTCGAGTTTGAGGACAACAGGGCACATGGGTTCTTGCGCCGCCAGGACGACGACATCGACGAAGCGATCGAGAGCGATGCGCTGATGATCAAACCCGGGGGGGGAGGACGAACCGTCGAAGCAAACGTTTGAGCCGATGTTTATTCCCTCGCCGCTGGATAGTATGGCGATGGCACAGGTGAAACCGTCGGCTGGCCGGCCCGCGAATCGGCCACGAAGCGCAACGTCGAAATTCTGCCAGACGAAACGGCCGACGTTGTGGGGCGAAGGGCAGGACCGCGTTTGGGGCGCTGCAAACGAACGGGTCGATCCCGTTCTATCTTGCACCGATCGGGGTCGGACGGGTCGGGTTGTTTCCGTTCGATGGCAAAAGCCGTGCTG] [+] EMBL AL694155 [CCGAGGTTACTGCCGCAAGGGACGATTACGATCTCGAGTTTGAGGACAACAGGGCACATGGGTTCTTGCGCCGCCAGGACGACGACATCGACGAAGCGATCGAGAGCGATGCGCTGATGATCAAACCCGGGGGGGGAGGACGAACCGTCGAAGCAAACGTTTGAGCCGATGTTTATTCCCTCGCCGCTGGATAGTATGGCGATGGCACAGGTGAAACCGTCGGCTGGCCGGCCCGCGAATCGGCCACGAAGCGCAACGTCGAAATTCTGCCAGACGAAACGGCCGACGTTGTGGGGCGAAGGGCAGGACCGCGTTTGGGGCGCTGCAAACGAACGGGTCGATCCCGTTCTATCTTGCACCGATCGGGGTCGGACGGGTCGGGTTGTTTCCGTTCGATGGCAAAAGCCGTGCTG] consensusID : consensus_1795#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 274 fasta sequence [GCCAGAATCGCCACGAGGTGTACCGCCGCAAGGACGATTACGATCTCGAGTTTGAGGACAACAGGGCACATGGGTTCTTGCGCCGCCAGGACGACGACATCGACGAAGCGATCGAGAGCGATGCGCTGATATCCACGGGGAAGGACGAACCGTCGAAGCGAAACGTTTGAGCCGATGTTNTATTCCCTCGCCGCGTGGATAGTATGGCGATGGCACAGGTGAAACCGTCCGGCTGGCCCGGACCGCCGGAATCGGGGCACGGAAGCGCAAACGT] [+] EMBL BX466088 [GCCAGAATCGCCACGAGGTGTACCGCCGCAAGGACGATTACGATCTCGAGTTTGAGGACAACAGGGCACATGGGTTCTTGCGCCGCCAGGACGACGACATCGACGAAGCGATCGAGAGCGATGCGCTGATATCCACGGGGAAGGACGAACCGTCGAAGCGAAACGTTTGAGCCGATGTTNTATTCCCTCGCCGCGTGGATAGTATGGCGATGGCACAGGTGAAACCGTCCGGCTGGCCCGGACCGCCGGAATCGGGGCACGGAAGCGCAAACGT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_1795#0 ------------CCGAGGT-TACTGCCGCAAGGGACGATTACGATCTCGAGTTTGAGGAC 47 consensus_1795#1 GCCAGAATCGCCACGAGGTGTACCGCCGCAAGG-ACGATTACGATCTCGAGTTTGAGGAC 59 ****** *** ********* ************************** consensus_1795#0 AACAGGGCACATGGGTTCTTGCGCCGCCAGGACGACGACATCGACGAAGCGATCGAGAGC 107 consensus_1795#1 AACAGGGCACATGGGTTCTTGCGCCGCCAGGACGACGACATCGACGAAGCGATCGAGAGC 119 ************************************************************ consensus_1795#0 GATGCGCTGATGATCAAACCCGGGGGGGGAGGACGAACCGTCGAAGC-AAACGTTTGAGC 166 consensus_1795#1 GATGCGCTGATATCCAC-------GGGGAAGGACGAACCGTCGAAGCGAAACGTTTGAGC 172 *********** ** **** ****************** ************ consensus_1795#0 CGATGTTT-ATTCCCTCGCCGC-TGGATAGTATGGCGATGGCACAGGTGAAACCGTC-GG 223 consensus_1795#1 CGATGTTNTATTCCCTCGCCGCGTGGATAGTATGGCGATGGCACAGGTGAAACCGTCCGG 232 ******* ************* ********************************** ** consensus_1795#0 CTGGCC-GGCCCGC--GAATCGGC-CACG-AAGCGCAA-CGTCGAAATTCTGCCAGACGA 277 consensus_1795#1 CTGGCCCGGACCGCCGGAATCGGGGCACGGAAGCGCAAACGT------------------ 274 ****** ** **** ******* **** ******** *** consensus_1795#0 AACGGCCGACGTTGTGGGGCGAAGGGCAGGACCGCGTTTGGGGCGCTGCAAACGAACGGG 337 consensus_1795#1 ------------------------------------------------------------ consensus_1795#0 TCGATCCCGTTCTATCTTGCACCGATCGGGGTCGGACGGGTCGGGTTGTTTCCGTTCGAT 397 consensus_1795#1 ------------------------------------------------------------ consensus_1795#0 GGCAAAAGCCGTGCTG 413 consensus_1795#1 ---------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||