These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1811#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 594 fasta sequence [TAAGTGTTTGTTCATTCTCGCCAGTGTTTGCAGTTCCGAATTTCTCAAACCAGCTAAAAAGTGTATTTTTAGGTTTCGTATGGCGTACGAGTCCTCGGTGTTGTTTTTATCTGCATTAATTATGTTTTCTTTGAGTTTAAGAACCCTTTCTTTGAATGCGGAAAAAGCTTCATTTCCCCCTTGTTGTAGTGTTTCCACTTGTTGGAAAATGGCTTCTAAACTCATTTTTTCTCCAAACAGCTTAATAAGGTTTGTTTTTACTTTTACCCACGATTCGTCTAATATGCGATGAAAGAAACCAGCTGCACTACCTTTTAATTTAAACATTACGGTTCGAATTAAATCTTCCTCCGATTCACCCGCTGGTATTTGTTTAGCAAAGAATTCAACTTGATAAAGAAATCCATCTAAATCATTTGCATTTCCGTTGTATTCCGGAATACATAACATTGCCCTTTCGAGTGGAAATTCATATGCCATTTTGTGGATTGTAGTGTTTAATGCACGCTCGATTTCAATACTCTGGTTGAAAAAGTCTTCCTTAAGAATTCTGAGGTGTTCCGTATAATTATATTCTTTGTGTAGACACTGATC] [+] EMBL BX618903 [TAAGTGTTTGTTCATTCTCGCCAGTGTTTGCAGTTCCGAATTTCTCAAACCAGCTAAAAAGTGTATTTTTAGGTTTCGTATGGCGTACGAGTCCTCGGTGTTGTTTTTATCTGCATTAATTATGTTTTCTTTGAGTTTAAGAACCCTTTCTTTGAATGCGGAAAAAGCTTCATTTCCCCCTTGTTGTAGTGTTTCCACTTGTTGGAAAATGGCTTCTAAACTCATTTTTTCTCCAAACAGCTTAATAAGGTTTGTTTTTACTTTTACCCACGATTCGTCTAATATGCGATGAAAGAAACCAGCTGCACTACCTTTTAATTTAAACATTACGGTTCGAATTAAATCTTCCTCCGATTCACCCGCTGGTATTTGTTTAGCAAAGAATTCAACTTGATAAAGAAATCCATCTAAATCATTTGCATTTCCGTTGTATTCCGGAATACATAACATTGCCCTTTCGAGTGGAAATTCATATGCCATTTTGTGGATTGTAGTGTTTAATGCACGCTCGATTTCAATACTCTGGTTGAAAAAGTCTTCCTTAAGAATTCTGAGGTGTTCCGTATAATTATATTCTTTGTGTAGACACTGATC] consensusID : consensus_1811#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 423 fasta sequence [CTTTCTTTATATTGAGTGAAAGGTTCATTGACTCCTTGCTGCAAAGTTTCCACTTGTTGGAAAATGGCTTCTACACTCATTTTTTCTCCAAAAAGCTTTATTAAATTTAATTTAACATTCGCCCACGTATCATCTAATATGCGACTGAAAAATCCAGCAGCATTTCCTTTTAATTTGAACATTACCGTTCTAATTAAATCCTCTTCCGATTCGCCTCTTGGTATCTGATTCGCAAAATATTCTACTTGAAATAAAAATCCATCTAATTCCTTTGCAGCTCCGTGATATTCAGGAATGCATAGCATTGCCTTTTCCGTTGGGAATTCGTAAGCCATTTTTGAAAATGACGCGTTCAACGCTCTATCGATTTCAAGGCTTTGATTTAATAATTCTCCTTTGAGAACTTGGAGGCGTTTTTGGTAA] [+] EMBL BX626703 [CTTTCTTTATATTGAGTGAAAGGTTCATTGACTCCTTGCTGCAAAGTTTCCACTTGTTGGAAAATGGCTTCTACACTCATTTTTTCTCCAAAAAGCTTTATTAAATTTAATTTAACATTCGCCCACGTATCATCTAATATGCGACTGAAAAATCCAGCAGCATTTCCTTTTAATTTGAACATTACCGTTCTAATTAAATCCTCTTCCGATTCGCCTCTTGGTATCTGATTCGCAAAATATTCTACTTGAAATAAAAATCCATCTAATTCCTTTGCAGCTCCGTGATATTCAGGAATGCATAGCATTGCCTTTTCCGTTGGGAATTCGTAAGCCATTTTTGAAAATGACGCGTTCAACGCTCTATCGATTTCAAGGCTTTGATTTAATAATTCTCCTTTGAGAACTTGGAGGCGTTTTTGGTAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_1811#0 TAAGTGTTTGTTCATTCTCGCCAGTGTTTGCAGTTCCGAATTTCTCAAACCAGCTAAAAA 60 consensus_1811#1 ------------------------------------------------------------ consensus_1811#0 GTGTATTTTTAGGTTTCGTATGGCGTACGAGTCCTCGGTGTTGTTTTTATCTGCATTAAT 120 consensus_1811#1 ------------------------------------------------------------ consensus_1811#0 TATGTTTTCTTTGAGTTTAAGAACCCTTTCTTTGAATGCGGAAAAAGCTTCATTTCCCCC 180 consensus_1811#1 -------------------------CTTTCTTTATATTGAGTGAAAGGTTCATTGACTCC 35 ******** ** * **** ****** * ** consensus_1811#0 TTGTTGTAGTGTTTCCACTTGTTGGAAAATGGCTTCTAAACTCATTTTTTCTCCAAACAG 240 consensus_1811#1 TTGCTGCAAAGTTTCCACTTGTTGGAAAATGGCTTCTACACTCATTTTTTCTCCAAAAAG 95 *** ** * **************************** ****************** ** consensus_1811#0 CTTAATAAGGTTTGTTTTTACTTTTACCCACGATTCGTCTAATATGCGATGAAAGAAACC 300 consensus_1811#1 CTTTATTAAATTTAATTTAACATTCGCCCACGTATCATCTAATATGCGACTGAAAAATCC 155 *** ** * *** *** ** ** ****** ** ************ ** ** ** consensus_1811#0 AGCTGCACTACCTTTTAATTTAAACATTACGGTTCGAATTAAATCTTCCTCCGATTCACC 360 consensus_1811#1 AGCAGCATTTCCTTTTAATTTGAACATTACCGTTCTAATTAAATCCTCTTCCGATTCGCC 215 *** *** * *********** ******** **** ********* ** ******** ** consensus_1811#0 CGCTGGTATTTGTTTAGCAAAGAATTCAACTTGATAAAGAAATCCATCTAAATCATTTGC 420 consensus_1811#1 TCTTGGTATCTGATTCGCAAAATATTCTACTTGAAATAAAAATCCATCTAATTCCTTTGC 275 ****** ** ** ***** **** ****** * * ************ ** ***** consensus_1811#0 ATTTCCGTTGTATTCCGGAATACATAACATTGCCCTTTCGAGTGGAAATTCATATGCCAT 480 consensus_1811#1 AGCTCCGTGATATTCAGGAATGCATAGCATTGCCTTTTCCGTTGGGAATTCGTAAGCCAT 335 * ***** ***** ***** **** ******* **** *** ***** ** ***** consensus_1811#0 TTTGTGGATTGTAGTGTTTAATGCACGCTCGATTTCAATACTCTGGTTGAAAAAGTCTTC 540 consensus_1811#1 TTTTGAAAATGACGCGTTCAACGCTCTATCGATTTCAAGGCTTTGATTTAATAATTCTCC 395 *** * ** * *** ** ** * ********** ** ** ** ** ** *** * consensus_1811#0 CTTAAGAATTCTGAGGTGTTCCGTATAATTATATTCTTTGTGTAGACACTGATC 594 consensus_1811#1 TTTGAGAACTTGGAGGCGTTTTTGGTAA-------------------------- 423 ** **** * **** *** *** |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||