These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1851#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 581 fasta sequence [CCGCACCCTACTGTCCCGACGATTATCGCGAACGGTCACACGATCGCGGGCTGGATCGGGGCGAGAAGCAGTACTTTACGAAGACTTCCCGTACCCGCTCGGGCCATTAAGAGAATTAGAGACAAAGGTAAAGAGAGAGAGAGAGAGAGAGAAAGAGAGAGAGTTGTCAGTTGATTGTAAAAACAAACTCCACAGCGAGTAAAATGAGGAAAAAAAAACTATTTTTAAATAATAGAAAACATAATAGCGATCACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAGACGTACACAGGTACACACAGGTACACGGTAATGAGTCCTTTACAGTGGACCCTATTTTGGGATCTCTTCTTCAGCTCTTGTTCTGTGTTGTGTGGTTGTGGCTGTAGGTTTAGTACATTGTATTACAAAGGACACACAATTTCCCTTTATTTCCCTTTCCTCCCCTTTTTGCTCTTGATTTTTTGCTGAAACATTTTTGTTGATTTTGATGCCACGATCCGACACGACAGGACTTACACGTTCCGAATTACAGCCGGGACAAGAT] [+] EMBL BM576314 [CCGCACCCTACTGTCCCGACGATTATCGCGAACGGTCACACGATCGCGGGCTGGATCGGGGCGAGAAGCAGTACTTTACGAAGACTTCCCGTACCCGCTCGGGCCATTAAGAGAATTAGAGACAAAGGTAAAGAGAGAGAGAGAGAGAGAGAAAGAGAGAGAGTTGTCAGTTGATTGTAAAAACAAACTCCACAGCGAGTAAAATGAGGAAAAAAAAACTATTTTTAAATAATAGAAAACATAATAGCGATCACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAGACGTACACAGGTACACACAGGTACACGGTAATGAGTCCTTTACAGTGGACCCTATTTTGGGATCTCTTCTTCAGCTCTTGTTCTGTGTTGTGTGGTTGTGGCTGTAGGTTTAGTACATTGTATTACAAAGGACACACAATTTCCCTTTATTTCCCTTTCCTCCCCTTTTTGCTCTTGATTTTTTGCTGAAACATTTTTGTTGATTTTGATGCCACGATCCGACACGACAGGACTTACACGTTCCGAATTACAGCCGGGACAAGAT] consensusID : consensus_1851#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 199 fasta sequence [CCGGTTGATTGTAAGAACAAACTCCACAGCGAGTAAAATGAGGAAAAAAAAACTATTTTTAAATAATAGAAAACATAATAGCGATCACACACAGACACAGACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACA] [+] EMBL BM598449 [CCGGTTGATTGTAAGAACAAACTCCACAGCGAGTAAAATGAGGAAAAAAAAACTATTTTTAAATAATAGAAAACATAATAGCGATCACACACAGACACAGACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_1851#0 CCGCACCCTACTGTCCCGACGATTATCGCGAACGGTCACACGATCGCGGGCTGGATCGGG 60 consensus_1851#1 ------------------------------------------------------------ consensus_1851#0 GCGAGAAGCAGTACTTTACGAAGACTTCCCGTACCCGCTCGGGCCATTAAGAGAATTAGA 120 consensus_1851#1 ------------------------------------------------------------ consensus_1851#0 GACAAAGGTAAAGAGAGAGAGAGAGAGAGAGAAAGAGAGAGAGTTGTCAGTTGATTGTAA 180 consensus_1851#1 ----------------------------------------------CCGGTTGATTGTAA 14 * *********** consensus_1851#0 AAACAAACTCCACAGCGAGTAAAATGAGGAAAAAAAAACTATTTTTAAATAATAGAAAAC 240 consensus_1851#1 GAACAAACTCCACAGCGAGTAAAATGAGGAAAAAAAAACTATTTTTAAATAATAGAAAAC 74 *********************************************************** consensus_1851#0 ATAATAGCGATCACACACACACACACACACACACACACACACACACACACACACACACAC 300 consensus_1851#1 ATAATAGCGATCACACACAGACACAGACACACACACACACACACACACACACACACACAC 134 ******************* ***** ********************************** consensus_1851#0 ACACACACACACACAGACGTACACAGGTACACACAGGTACACGGTAATGAGTCCTTTACA 360 consensus_1851#1 ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC 194 *************** ** ***** ******* **** * * consensus_1851#0 GTGGACCCTATTTTGGGATCTCTTCTTCAGCTCTTGTTCTGTGTTGTGTGGTTGTGGCTG 420 consensus_1851#1 ACACA------------------------------------------------------- 199 * consensus_1851#0 TAGGTTTAGTACATTGTATTACAAAGGACACACAATTTCCCTTTATTTCCCTTTCCTCCC 480 consensus_1851#1 ------------------------------------------------------------ consensus_1851#0 CTTTTTGCTCTTGATTTTTTGCTGAAACATTTTTGTTGATTTTGATGCCACGATCCGACA 540 consensus_1851#1 ------------------------------------------------------------ consensus_1851#0 CGACAGGACTTACACGTTCCGAATTACAGCCGGGACAAGAT 581 consensus_1851#1 ----------------------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||