These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2255#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 830 fasta sequence [CGGCGCGGTGTGTTTGTACCTGAGCGCGATGCGGCCTGGGAGCTGGAACCAAACGCGTTCCAGGAGCAGCTGGTTCGGCCGACCGCATGCGACGCGGAAGATTGTAAATGCGAGCAAGGGCGCAGCGTGGACAGCCACGAGTGGCGGCTGGTGATATGTGGGTCGTGCGGCTCCACCTGCCGCCACCGGCAGTGCATGGAGGCGACGCCCGAACTGACGCGTGCCTACGTGTGCCAGCTGTGTCGGCCGATTCTTGGCGAGCGAGTATCGCTGGTCGAGGATAGCGACGACGATAGTAGCGAGGATGAGACGGTAGCGTCTGGTTCGTCCAGTTCCGCGTCCCAGTTCGACAAAGTGCGCCCGGCTAAAGAGCTGTCGAGGCCGGGTTCGGGCGAGTCGGGCGTACACTGCTCAAGCTCGAGCGACGAAGCGCTGGTCGCCGTCTGCCGGCGAGCTCGCCGAAATGTGGCTACCATTGCGTCGGACGGCTCGGACAGTGAGCATTCCGATGCTAGCTCCGTGCAGTTAAGACGCTTCGTGCAGCAGAACACGGGAAAGCGTGTGCGTCGACTGCTGTCCGATGAATCGGACGAGGGAACTAGCAATCCCATGGGCGTGGAGGAGGATGGAAAGGATCCGTCGGAAGCCAGTGGACTATCAAAGTCTGGTACCAGCAAGCATTTAAAGACAGACACCAAACCGACCACTGCGCTTGCGTTGAGCGTTGATCGCTCACCGGCTGGGCGGGTGGATGAAACGTCCGGCGCATTCGCAGCTCCTCATCCTGACGTAGTTTCTATTGACTCGACAAGTGAAAGCAGCATAGGCAT] [+] EMBL BX623546 [CGGCGCGGTGTGTTTGTACCTGAGCGCGATGCGGCCTGGGAGCTGGAACCAAACGCGTTCCAGGAGCAGCTGGTTCGGCCGACCGCATGCGACGCGGAAGATTGTAAATGCGAGCAAGGGCGCAGCGTGGACAGCCACGAGTGGCGGCTGGTGATATGTGGGTCGTGCGGCTCCACCTGCCGCCACCGGCAGTGCATGGAGGCGACGCCCGAACTGACGCGTGCCTACGTGTGCCAGCTGTGTCGGCCGATTCTTGGCGAGCGAGTATCGCTGGTCGAGGATAGCGACGACGATAGTAGCGAGGATGAGACGGTAGCGTCTGGTTCGTCCAGTTCCGCGTCCCAGTTCGACAAAGTGCGCCCGGCTAAAGAGCTGTCGAGGCCGGGTTCGGGCGAGTCGGGCGTACACTGCTCAAGCTCGAGCGACGAAGCGCTGGTCGCCGTCTGCCGGCGAGCTCGCCGAAATGTGGCTACCATTGCGTCGGACGGCTCGGACAGTGAGCATTCCGATGCTAGCTCCGTGCAGTTAAGACGCTTCGTGCAGCAGAACACGGGAAAGCGTGTGCGTCGACTGCTGTCCGATGAATCGGACGAGGGAACTAGCAATCCCATGGGCGTGGAGGAGGATGGAAAGGATCCGTCGGAAGCCAGTGGACTATCAAAGTCTGGTACCAGCAAGCATTTAAAGACAGACACCAAACCGACCACTGCGCTTGCGTTGAGCGTTGATCGCTCACCGGCTGGGCGGGTGGATGAAACGTCCGGCGCATTCGCAGCTCCTCATCCTGACGTAGTTTCTATTGACTCGACAAGTGAAAGCAGCATAGGCAT] consensusID : consensus_2255#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 619 fasta sequence [CCGCCCACGCGTCCGCGATGCGGCCTGGGAGCTGGAACCGAACGCGTTCCAGGAGCAGCTGGTGCGGCCGACTGCATGCGACTCGGAAGATTGTAAATGCGAGCAAGGGCGCAGCGTGGACAGCCACGAGTGGCGGCTGGTGATATGTGGGTCGTGCGGCTCCACCTGCCGCCACCGGCAGTGCATGGAGGCGACGCCCGAGCTGACGCGTGCCTACGTGTGCCAGCTGTGTCGGCCGATTCTTGGCGAGCGAGTATCGCTGGTCGAGGATAGCGACGACGATAGTAGCGAGGATGAGACGGTAGCGTCTGGTTCGTCCAGTTCCGCGTCCCAGTTCGACAAAGTGCGCCCGGCTAAAGAGCTGTCGAGGCCGGGTTCGGGCGAGTCGGGCGTACACTGCTCAAGCTCGAGCGACGAAGCGCTGGTCGCCGTCTGCCGGCGAGCTCGCCGAAATGTGGCTACCATTGCGTCGGACGGCTCGGACAGTGAGCATTCCGATGCTAGCTCCGTGCAGTTAAGACGCTTCGTGCAGCAGAACACGGGAAAGCGTGTGCGGCGACTGCTGTCCGATGAATCGGACGAGGGAACTAGCAATCCCATGGGCGTGGAGGAGGATGGA] [+] EMBL BM599066 [CCGCCCACGCGTCCGCGATGCGGCCTGGGAGCTGGAACCGAACGCGTTCCAGGAGCAGCTGGTGCGGCCGACTGCATGCGACTCGGAAGATTGTAAATGCGAGCAAGGGCGCAGCGTGGACAGCCACGAGTGGCGGCTGGTGATATGTGGGTCGTGCGGCTCCACCTGCCGCCACCGGCAGTGCATGGAGGCGACGCCCGAGCTGACGCGTGCCTACGTGTGCCAGCTGTGTCGGCCGATTCTTGGCGAGCGAGTATCGCTGGTCGAGGATAGCGACGACGATAGTAGCGAGGATGAGACGGTAGCGTCTGGTTCGTCCAGTTCCGCGTCCCAGTTCGACAAAGTGCGCCCGGCTAAAGAGCTGTCGAGGCCGGGTTCGGGCGAGTCGGGCGTACACTGCTCAAGCTCGAGCGACGAAGCGCTGGTCGCCGTCTGCCGGCGAGCTCGCCGAAATGTGGCTACCATTGCGTCGGACGGCTCGGACAGTGAGCATTCCGATGCTAGCTCCGTGCAGTTAAGACGCTTCGTGCAGCAGAACACGGGAAAGCGTGTGCGGCGACTGCTGTCCGATGAATCGGACGAGGGAACTAGCAATCCCATGGGCGTGGAGGAGGATGGA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_2255#0 CGGCGCGGTGTGTTTGTACCTGAGCGCGATGCGGCCTGGGAGCTGGAACCAAACGCGTTC 60 consensus_2255#1 -----------CCGCCCACGCGTCCGCGATGCGGCCTGGGAGCTGGAACCGAACGCGTTC 49 ** * ************************** ********* consensus_2255#0 CAGGAGCAGCTGGTTCGGCCGACCGCATGCGACGCGGAAGATTGTAAATGCGAGCAAGGG 120 consensus_2255#1 CAGGAGCAGCTGGTGCGGCCGACTGCATGCGACTCGGAAGATTGTAAATGCGAGCAAGGG 109 ************** ******** ********* ************************** consensus_2255#0 CGCAGCGTGGACAGCCACGAGTGGCGGCTGGTGATATGTGGGTCGTGCGGCTCCACCTGC 180 consensus_2255#1 CGCAGCGTGGACAGCCACGAGTGGCGGCTGGTGATATGTGGGTCGTGCGGCTCCACCTGC 169 ************************************************************ consensus_2255#0 CGCCACCGGCAGTGCATGGAGGCGACGCCCGAACTGACGCGTGCCTACGTGTGCCAGCTG 240 consensus_2255#1 CGCCACCGGCAGTGCATGGAGGCGACGCCCGAGCTGACGCGTGCCTACGTGTGCCAGCTG 229 ******************************** *************************** consensus_2255#0 TGTCGGCCGATTCTTGGCGAGCGAGTATCGCTGGTCGAGGATAGCGACGACGATAGTAGC 300 consensus_2255#1 TGTCGGCCGATTCTTGGCGAGCGAGTATCGCTGGTCGAGGATAGCGACGACGATAGTAGC 289 ************************************************************ consensus_2255#0 GAGGATGAGACGGTAGCGTCTGGTTCGTCCAGTTCCGCGTCCCAGTTCGACAAAGTGCGC 360 consensus_2255#1 GAGGATGAGACGGTAGCGTCTGGTTCGTCCAGTTCCGCGTCCCAGTTCGACAAAGTGCGC 349 ************************************************************ consensus_2255#0 CCGGCTAAAGAGCTGTCGAGGCCGGGTTCGGGCGAGTCGGGCGTACACTGCTCAAGCTCG 420 consensus_2255#1 CCGGCTAAAGAGCTGTCGAGGCCGGGTTCGGGCGAGTCGGGCGTACACTGCTCAAGCTCG 409 ************************************************************ consensus_2255#0 AGCGACGAAGCGCTGGTCGCCGTCTGCCGGCGAGCTCGCCGAAATGTGGCTACCATTGCG 480 consensus_2255#1 AGCGACGAAGCGCTGGTCGCCGTCTGCCGGCGAGCTCGCCGAAATGTGGCTACCATTGCG 469 ************************************************************ consensus_2255#0 TCGGACGGCTCGGACAGTGAGCATTCCGATGCTAGCTCCGTGCAGTTAAGACGCTTCGTG 540 consensus_2255#1 TCGGACGGCTCGGACAGTGAGCATTCCGATGCTAGCTCCGTGCAGTTAAGACGCTTCGTG 529 ************************************************************ consensus_2255#0 CAGCAGAACACGGGAAAGCGTGTGCGTCGACTGCTGTCCGATGAATCGGACGAGGGAACT 600 consensus_2255#1 CAGCAGAACACGGGAAAGCGTGTGCGGCGACTGCTGTCCGATGAATCGGACGAGGGAACT 589 ************************** ********************************* consensus_2255#0 AGCAATCCCATGGGCGTGGAGGAGGATGGAAAGGATCCGTCGGAAGCCAGTGGACTATCA 660 consensus_2255#1 AGCAATCCCATGGGCGTGGAGGAGGATGGA------------------------------ 619 ****************************** consensus_2255#0 AAGTCTGGTACCAGCAAGCATTTAAAGACAGACACCAAACCGACCACTGCGCTTGCGTTG 720 consensus_2255#1 ------------------------------------------------------------ consensus_2255#0 AGCGTTGATCGCTCACCGGCTGGGCGGGTGGATGAAACGTCCGGCGCATTCGCAGCTCCT 780 consensus_2255#1 ------------------------------------------------------------ consensus_2255#0 CATCCTGACGTAGTTTCTATTGACTCGACAAGTGAAAGCAGCATAGGCAT 830 consensus_2255#1 -------------------------------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||